IVF0012709 (gene) Melon (IVF77) v1

Overview


Name	IVF0012709
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	LINE-1 retrotransposable element ORF2 protein
Location	chr05: 21820481 .. 21821364 (+)
RNA-Seq Expression	IVF0012709
Synteny	IVF0012709

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAAAGACAGATTTAATTGAAGTTAGGTTGAAAATCAGGCACAACTACACAGGCTTCATTCCAGCACAAATCAACATTATGAACAGTAAAGGTAATATTTCTACAGTTCAAACCGTATCATATACTGAAGGAAGGTGGTTTAAGAAGAGAAATGCAAACATTCACGGTTCTTTTAACAAACAAGCTGCTTTAGAGTTCAATGAATTTGATTTTAAAGCTGAGAAATATTCTTTCATGAGGTTCGTTTCCATTCCACCAGAGAAAAAAGATAAAAAGCAAAGGAATCCACACAAGCAAAATCGGAATAGTAACAAACGGTTGGCCATTTTAAATTCTCGAGATTCAACTTCCAAAGCCATCATTATCTCTGACAACTATGATGGAGGTAGGGGTAGTGATGAAAGGCTTAAATCTGTCATTTCAGGGAAGATGGACAAAGGAAAGGACATTATGGTATTTGTTGACCATCATGAGTTGTTACAAAAGAACAAATTTCCAAAAAGGAAAGTTAGCTTCCACTCACCAAAAAACAAGGCTTTCTTTTACAACCCTGAAAATGCCCTTGCAAAACCACTTCAAATTGAGAGCCCTACCTTTAAAGGAAGTCCTACAAGCCTTGATAGAATTATTAAACCTTTGAAAATCAGCCCACCAAAAGCTACTTTCATCCACAAGAAAAAGAAAAGCTCTCAGATGATTTACAAAGTTAAAATAACAACAATAAGGCAATTGAGCTCAATGCTAAACAAATTGTGGACATAGAGAAGAAGGAGAATGCCATAAACCTGAAAGTGGAAATGGGGAACATATCTCCCCTTCATGAGAAAATGGAAGTGGAATATGTCTCTAGCTCAGACTCTCCAATCATGACTTCAATTTAA

mRNA sequence

ATGAGAAAGACAGATTTAATTGAAGTTAGGTTGAAAATCAGGCACAACTACACAGGCTTCATTCCAGCACAAATCAACATTATGAACAGTAAAGGTAATATTTCTACAGTTCAAACCGTATCATATACTGAAGGAAGGTGGTTTAAGAAGAGAAATGCAAACATTCACGGTTCTTTTAACAAACAAGCTGCTTTAGAGTTCAATGAATTTGATTTTAAAGCTGAGAAATATTCTTTCATGAGGTTCGTTTCCATTCCACCAGAGAAAAAAGATAAAAAGCAAAGGAATCCACACAAGCAAAATCGGAATAGTAACAAACGGTTGGCCATTTTAAATTCTCGAGATTCAACTTCCAAAGCCATCATTATCTCTGACAACTATGATGGAGGTAGGGGTAGTGATGAAAGGCTTAAATCTGTCATTTCAGGGAAGATGGACAAAGGAAAGGACATTATGGTATTTGTTGACCATCATGAGTTGTTACAAAAGAACAAATTTCCAAAAAGGAAAGTTAGCTTCCACTCACCAAAAAACAAGGCTTTCTTTTACAACCCTGAAAATGCCCTTGCAAAACCACTTCAAATTGAGAGCCCTACCTTTAAAGGAAGTCCTACAAGCCTTGATAGAATTATTAAACCTTTGAAAATCAGCCCACCAAAAGCTACTTTCATCCACAAGAAAAAGAAAAGCTCTCAGATGATTTACAAACTCAATGCTAAACAAATTGTGGACATAGAGAAGAAGGAGAATGCCATAAACCTGAAAGTGGAAATGGGGAACATATCTCCCCTTCATGAGAAAATGGAAGTGGAATATGTCTCTAGCTCAGACTCTCCAATCATGACTTCAATTTAA

Coding sequence (CDS)

ATGAGAAAGACAGATTTAATTGAAGTTAGGTTGAAAATCAGGCACAACTACACAGGCTTCATTCCAGCACAAATCAACATTATGAACAGTAAAGGTAATATTTCTACAGTTCAAACCGTATCATATACTGAAGGAAGGTGGTTTAAGAAGAGAAATGCAAACATTCACGGTTCTTTTAACAAACAAGCTGCTTTAGAGTTCAATGAATTTGATTTTAAAGCTGAGAAATATTCTTTCATGAGGTTCGTTTCCATTCCACCAGAGAAAAAAGATAAAAAGCAAAGGAATCCACACAAGCAAAATCGGAATAGTAACAAACGGTTGGCCATTTTAAATTCTCGAGATTCAACTTCCAAAGCCATCATTATCTCTGACAACTATGATGGAGGTAGGGGTAGTGATGAAAGGCTTAAATCTGTCATTTCAGGGAAGATGGACAAAGGAAAGGACATTATGGTATTTGTTGACCATCATGAGTTGTTACAAAAGAACAAATTTCCAAAAAGGAAAGTTAGCTTCCACTCACCAAAAAACAAGGCTTTCTTTTACAACCCTGAAAATGCCCTTGCAAAACCACTTCAAATTGAGAGCCCTACCTTTAAAGGAAGTCCTACAAGCCTTGATAGAATTATTAAACCTTTGAAAATCAGCCCACCAAAAGCTACTTTCATCCACAAGAAAAAGAAAAGCTCTCAGATGATTTACAAACTCAATGCTAAACAAATTGTGGACATAGAGAAGAAGGAGAATGCCATAAACCTGAAAGTGGAAATGGGGAACATATCTCCCCTTCATGAGAAAATGGAAGTGGAATATGTCTCTAGCTCAGACTCTCCAATCATGACTTCAATTTAA

Protein sequence

MRKTDLIEVRLKIRHNYTGFIPAQINIMNSKGNISTVQTVSYTEGRWFKKRNANIHGSFNKQAALEFNEFDFKAEKYSFMRFVSIPPEKKDKKQRNPHKQNRNSNKRLAILNSRDSTSKAIIISDNYDGGRGSDERLKSVISGKMDKGKDIMVFVDHHELLQKNKFPKRKVSFHSPKNKAFFYNPENALAKPLQIESPTFKGSPTSLDRIIKPLKISPPKATFIHKKKKSSQMIYKLNAKQIVDIEKKENAINLKVEMGNISPLHEKMEVEYVSSSDSPIMTSI

Homology

[Close]

BLAST of IVF0012709 vs. ExPASy TrEMBL
Match: A0A5A7V6K4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold107G00420 PE=4 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 4.2e-100
Identity = 203/294 (69.05%), Postives = 234/294 (79.59%), Query Frame = 0


Query: 1   MRKTDLIEVRLKIRHNYTGFIPAQINIMNSKGNISTVQTVSYTEGRWFKKRNANIHGSFN 60
           MRK+DLIEVRLKIRHNY  FIPAQINIMNSKGNI TVQTVS+TEGRWFK+RNANIHGSF 
Sbjct: 1   MRKSDLIEVRLKIRHNYISFIPAQINIMNSKGNIFTVQTVSFTEGRWFKERNANIHGSFT 60

Query: 61  KQAALEFNEFDFKAEKYSFMRFVSIPPEKKDKKQRNPHKQNRNSNKRLAILNSRDSTSKA 120
           +QAALEFNEFDF+AEKYSFM FV+ PPEKKDKK +   K ++NSNKR  I NS DSTSKA
Sbjct: 61  RQAALEFNEFDFEAEKYSFMGFVATPPEKKDKKPKKSLKHSQNSNKRPTISNSLDSTSKA 120

Query: 121 IIISDNYDGGRGSDERLKSVISGKMDKGKDIMVFVDHHELLQKNKFPKRKVSFHSPKNKA 180
           III +N DGGR SD RLK VISG+MDKGK IMVF +  + +Q   FPKRKVSF SPKNK 
Sbjct: 121 IIIFNNSDGGRSSDGRLKFVISGRMDKGKGIMVFTNQQDEIQTANFPKRKVSFPSPKNKT 180

Query: 181 FFYNPENALAKPLQIESPTFKGSPTSLDRIIKPLKISPPKATFIHKKKKSSQMIYK---- 240
           FFYNP+ A AK L+IES  FK S  S DR +KPLKIS PK+T + KK+KS +MIY+    
Sbjct: 181 FFYNPKIAPAKTLRIESLIFKDSSPSYDRTLKPLKISLPKSTLLQKKRKSPRMIYRVKNN 240

Query: 241 ------LNAKQIVDIEKKENAINLKVEMGNISPLHEKMEVEYVSSSDSPIMTSI 285
                 LNAK+++D EKKE AINL V++GNISPL E+MEV++VSS +SPIMT I
Sbjct: 241 NNKVIELNAKELIDTEKKEMAINLAVDLGNISPLSEEMEVKHVSSPNSPIMTPI 294

[Close]

BLAST of IVF0012709 vs. ExPASy TrEMBL
Match: A0A5D3CAI5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G00620 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 6.1e-67
Identity = 157/287 (54.70%), Postives = 188/287 (65.51%), Query Frame = 0


Query: 1   MRKTDLIEVRLKIRHNYTGFIPAQINIMNSKGNISTVQTVSYTEGRWFKKRNANIHGSFN 60
           MRKTDLIEVR KIRHNYTGFIPAQI I +SKGNI TVQTVS+TEGR FK+RNANIHGSF 
Sbjct: 1   MRKTDLIEVRPKIRHNYTGFIPAQIYITDSKGNIFTVQTVSFTEGRCFKERNANIHGSFT 60

Query: 61  KQAALEFNEFDFKAEKYSFMRFVSIPPE--KKDKKQRNPHKQNRNSNKRLAILNSRDSTS 120
           +QAALEFNEFDF AEKY FM FV+ PPE  KK+KK +   K +RNSNKR  I NS DSTS
Sbjct: 61  RQAALEFNEFDFDAEKYPFMGFVATPPEKKKKEKKLKKNPKHSRNSNKRPTISNSPDSTS 120

Query: 121 KA-IIISDNYDGGRGSDERLKSVISGKMDKGKDIMVFVDHHELLQKNKFPKRKVSFHSPK 180
           KA IIIS+N+D GRG+D RLKS+I+ KMDK   IMVF D H+ +Q+  FPKRKV      
Sbjct: 121 KAIIIISNNFDSGRGNDGRLKSIIAEKMDKRNGIMVFTDRHDEIQRASFPKRKV------ 180

Query: 181 NKAFFYNPENALAKPLQIESPTFKGSPTSLDRIIKPLKISPPKATFIHKKKKSSQMIYKL 240
                                                         I++ K ++    +L
Sbjct: 181 ----------------------------------------------IYRVKNNNNKAIEL 235

Query: 241 NAKQIVDIEKKENAINLKVEMGNISPLHEKMEVEYVSSSDSPIMTSI 285
           +A+ + + EKKE AINL V++GNISPL E+MEVE++SS DSP+MT I
Sbjct: 241 SAENLKETEKKEKAINLAVDLGNISPLSEEMEVEHISSPDSPVMTPI 235

[Close]

BLAST of IVF0012709 vs. ExPASy TrEMBL
Match: A0A5A7THF9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4170G00120 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 2.0e-65
Identity = 151/269 (56.13%), Postives = 178/269 (66.17%), Query Frame = 0


Query: 1   MRKTDLIEVRLKIRHNYTGFIPAQINIMNSKGNISTVQTVSYTEGRWFKKRNANIHGSFN 60
           MRKT LIEVRLKIRHNYT  I AQINI ++K NI TVQT+SYTEGRWFK+RNANIHGSF 
Sbjct: 88  MRKTYLIEVRLKIRHNYTRLILAQINITDNKNNIFTVQTISYTEGRWFKERNANIHGSFT 147

Query: 61  KQAALEFNEFDFKAEKYSFMRFVSIPPEKKDKKQRNPHKQNRNSNKRLAILNSRDSTSKA 120
           +QAAL+FNEFDF+A++YSFMRF + PP+K++KK +   K +RNSN+R +I NS DSTSKA
Sbjct: 148 RQAALKFNEFDFEAKQYSFMRFTATPPKKEEKKPKKTQKNSRNSNERPSISNSLDSTSKA 207

Query: 121 IIISDNYDGGRGSDERLKSVISGKMDKGKDIMVFVDHHELLQKNKFPKRKVSFHSPKNKA 180
           IIISDN DGGRGSDERLKSVIS                                      
Sbjct: 208 IIISDNSDGGRGSDERLKSVIS-------------------------------------- 267

Query: 181 FFYNPENALAKPLQIESPTFKGSPTSLDRIIKPLKISPPKATFIHKKKKSSQMIYK---- 240
                    AKPL+IESPTFK + T LDR   PLKISP K T+IH+K KS +MIY+    
Sbjct: 268 ---------AKPLRIESPTFKDNSTCLDRTPMPLKISPKKGTYIHRKMKSPKMIYRVKNN 309

Query: 241 ------LNAKQIVDIEKKENAINLKVEMG 260
                 L+AKQIV+ EKKE   NL V++G
Sbjct: 328 HNKAIVLSAKQIVEAEKKEKTFNLIVDLG 309

[Close]

BLAST of IVF0012709 vs. ExPASy TrEMBL
Match: A0A5D3DT94 (Putative amidohydrolase ytcJ OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G00450 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.1e-34
Identity = 78/99 (78.79%), Postives = 86/99 (86.87%), Query Frame = 0


Query: 1   MRKTDLIEVRLKIRHNYTGFIPAQINIMNSKGNISTVQTVSYTEGRWFKKRNANIHGSFN 60
           MRKTDLIEVRLKIRHNYTGFIPAQINI +SKGNI T+QTVS+TE RWFK+RNANIH  F 
Sbjct: 42  MRKTDLIEVRLKIRHNYTGFIPAQINIKDSKGNIFTIQTVSFTEERWFKERNANIHSYFT 101

Query: 61  KQAALEFNEFDFKAEKYSFMRFVSIPPEKKDKKQRNPHK 100
           +QAALEFNEFDF+AEKYSFM FV  PP+KKDKK +   K
Sbjct: 102 RQAALEFNEFDFEAEKYSFMGFVVTPPKKKDKKLKKTLK 140

[Close]

BLAST of IVF0012709 vs. ExPASy TrEMBL
Match: A0A5A7V4L2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold321G00310 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 3.5e-30
Identity = 109/289 (37.72%), Postives = 127/289 (43.94%), Query Frame = 0


Query: 1   MRKTDLIEVRLKIRHNYTGFIPAQINIMNSKGNISTVQTVSYTEGRWFKKRNANIHGSFN 60
           MRK DLIE RLKI+HNYTGFI AQINI NSKGNI T+ TVSYTEGRW             
Sbjct: 119 MRKADLIEARLKIKHNYTGFISAQINITNSKGNIFTIHTVSYTEGRW------------- 178

Query: 61  KQAALEFNEFDFKAEKYSFMRFVSIPPEKKDKKQRNPHKQNRNSNKRLAILNSRDSTSKA 120
                                                                       
Sbjct: 179 ------------------------------------------------------------ 238

Query: 121 IIISDNYDGGRGSDERLKSVISGKMDKGKDIMVFVDHHELLQKNKFPKRKVSFHSPKNKA 180
                      G+D RLK VISG+MDKGK IMVF D  E  +K  F KRK          
Sbjct: 239 -----------GNDGRLKFVISGQMDKGKGIMVFNDSQE--EKANFLKRK---------- 282

Query: 181 FFYNPENALAKPLQIESPTFKGSPTSLDRIIKPLKISPPKATFIHKKKKSSQMIYKLNAK 240
                                         IKPLKI+P K T+  KKKKS + IY++   
Sbjct: 299 -----------------------------NIKPLKINPLKGTYFQKKKKSPRKIYRVKNN 282

Query: 241 -----QIVDIEKKENAINLKVEMGNISPLHEKMEVEYVSSSDSPIMTSI 285
                ++V+ EKKE AINL +E+GNI PL E++EVE+VSS DSPIMT I
Sbjct: 359 HNKEIELVEAEKKEKAINLTMELGNIFPLPEELEVEHVSSPDSPIMTPI 282

[Close]

BLAST of IVF0012709 vs. NCBI nr
Match: KAA0063733.1 (hypothetical protein E6C27_scaffold1290G00140 [Cucumis melo var. makuwa] >TYK10959.1 hypothetical protein E5676_scaffold107G00420 [Cucumis melo var. makuwa])

HSP 1 Score: 373 bits (957), Expect = 7.03e-126
Identity = 203/294 (69.05%), Postives = 234/294 (79.59%), Query Frame = 0


Query: 1   MRKTDLIEVRLKIRHNYTGFIPAQINIMNSKGNISTVQTVSYTEGRWFKKRNANIHGSFN 60
           MRK+DLIEVRLKIRHNY  FIPAQINIMNSKGNI TVQTVS+TEGRWFK+RNANIHGSF 
Sbjct: 1   MRKSDLIEVRLKIRHNYISFIPAQINIMNSKGNIFTVQTVSFTEGRWFKERNANIHGSFT 60

Query: 61  KQAALEFNEFDFKAEKYSFMRFVSIPPEKKDKKQRNPHKQNRNSNKRLAILNSRDSTSKA 120
           +QAALEFNEFDF+AEKYSFM FV+ PPEKKDKK +   K ++NSNKR  I NS DSTSKA
Sbjct: 61  RQAALEFNEFDFEAEKYSFMGFVATPPEKKDKKPKKSLKHSQNSNKRPTISNSLDSTSKA 120

Query: 121 IIISDNYDGGRGSDERLKSVISGKMDKGKDIMVFVDHHELLQKNKFPKRKVSFHSPKNKA 180
           III +N DGGR SD RLK VISG+MDKGK IMVF +  + +Q   FPKRKVSF SPKNK 
Sbjct: 121 IIIFNNSDGGRSSDGRLKFVISGRMDKGKGIMVFTNQQDEIQTANFPKRKVSFPSPKNKT 180

Query: 181 FFYNPENALAKPLQIESPTFKGSPTSLDRIIKPLKISPPKATFIHKKKKSSQMIYK---- 240
           FFYNP+ A AK L+IES  FK S  S DR +KPLKIS PK+T + KK+KS +MIY+    
Sbjct: 181 FFYNPKIAPAKTLRIESLIFKDSSPSYDRTLKPLKISLPKSTLLQKKRKSPRMIYRVKNN 240

Query: 241 ------LNAKQIVDIEKKENAINLKVEMGNISPLHEKMEVEYVSSSDSPIMTSI 284
                 LNAK+++D EKKE AINL V++GNISPL E+MEV++VSS +SPIMT I
Sbjct: 241 NNKVIELNAKELIDTEKKEMAINLAVDLGNISPLSEEMEVKHVSSPNSPIMTPI 294

[Close]

BLAST of IVF0012709 vs. NCBI nr
Match: TYK07346.1 (hypothetical protein E5676_scaffold202G00620 [Cucumis melo var. makuwa])

HSP 1 Score: 265 bits (676), Expect = 7.64e-84
Identity = 158/288 (54.86%), Postives = 190/288 (65.97%), Query Frame = 0


Query: 1   MRKTDLIEVRLKIRHNYTGFIPAQINIMNSKGNISTVQTVSYTEGRWFKKRNANIHGSFN 60
           MRKTDLIEVR KIRHNYTGFIPAQI I +SKGNI TVQTVS+TEGR FK+RNANIHGSF 
Sbjct: 1   MRKTDLIEVRPKIRHNYTGFIPAQIYITDSKGNIFTVQTVSFTEGRCFKERNANIHGSFT 60

Query: 61  KQAALEFNEFDFKAEKYSFMRFVSIPPEKKDKKQR---NPHKQNRNSNKRLAILNSRDST 120
           +QAALEFNEFDF AEKY FM FV+ PPEKK K+++   NP K +RNSNKR  I NS DST
Sbjct: 61  RQAALEFNEFDFDAEKYPFMGFVATPPEKKKKEKKLKKNP-KHSRNSNKRPTISNSPDST 120

Query: 121 SKAIII-SDNYDGGRGSDERLKSVISGKMDKGKDIMVFVDHHELLQKNKFPKRKVSFHSP 180
           SKAIII S+N+D GRG+D RLKS+I+ KMDK   IMVF D H+ +Q+  FPKRKV     
Sbjct: 121 SKAIIIISNNFDSGRGNDGRLKSIIAEKMDKRNGIMVFTDRHDEIQRASFPKRKV----- 180

Query: 181 KNKAFFYNPENALAKPLQIESPTFKGSPTSLDRIIKPLKISPPKATFIHKKKKSSQMIYK 240
                                                          I++ K ++    +
Sbjct: 181 -----------------------------------------------IYRVKNNNNKAIE 235

Query: 241 LNAKQIVDIEKKENAINLKVEMGNISPLHEKMEVEYVSSSDSPIMTSI 284
           L+A+ + + EKKE AINL V++GNISPL E+MEVE++SS DSP+MT I
Sbjct: 241 LSAENLKETEKKEKAINLAVDLGNISPLSEEMEVEHISSPDSPVMTPI 235

[Close]

BLAST of IVF0012709 vs. NCBI nr
Match: KAA0040709.1 (hypothetical protein E6C27_scaffold529G00290 [Cucumis melo var. makuwa] >TYK14278.1 hypothetical protein E5676_scaffold4170G00120 [Cucumis melo var. makuwa])

HSP 1 Score: 257 bits (656), Expect = 2.89e-80
Identity = 151/269 (56.13%), Postives = 178/269 (66.17%), Query Frame = 0


Query: 1   MRKTDLIEVRLKIRHNYTGFIPAQINIMNSKGNISTVQTVSYTEGRWFKKRNANIHGSFN 60
           MRKT LIEVRLKIRHNYT  I AQINI ++K NI TVQT+SYTEGRWFK+RNANIHGSF 
Sbjct: 88  MRKTYLIEVRLKIRHNYTRLILAQINITDNKNNIFTVQTISYTEGRWFKERNANIHGSFT 147

Query: 61  KQAALEFNEFDFKAEKYSFMRFVSIPPEKKDKKQRNPHKQNRNSNKRLAILNSRDSTSKA 120
           +QAAL+FNEFDF+A++YSFMRF + PP+K++KK +   K +RNSN+R +I NS DSTSKA
Sbjct: 148 RQAALKFNEFDFEAKQYSFMRFTATPPKKEEKKPKKTQKNSRNSNERPSISNSLDSTSKA 207

Query: 121 IIISDNYDGGRGSDERLKSVISGKMDKGKDIMVFVDHHELLQKNKFPKRKVSFHSPKNKA 180
           IIISDN DGGRGSDERLKSVIS                                      
Sbjct: 208 IIISDNSDGGRGSDERLKSVIS-------------------------------------- 267

Query: 181 FFYNPENALAKPLQIESPTFKGSPTSLDRIIKPLKISPPKATFIHKKKKSSQMIYK---- 240
                    AKPL+IESPTFK + T LDR   PLKISP K T+IH+K KS +MIY+    
Sbjct: 268 ---------AKPLRIESPTFKDNSTCLDRTPMPLKISPKKGTYIHRKMKSPKMIYRVKNN 309

Query: 241 ------LNAKQIVDIEKKENAINLKVEMG 259
                 L+AKQIV+ EKKE   NL V++G
Sbjct: 328 HNKAIVLSAKQIVEAEKKEKTFNLIVDLG 309

[Close]

BLAST of IVF0012709 vs. NCBI nr
Match: KAA0047508.1 (putative amidohydrolase ytcJ [Cucumis melo var. makuwa] >TYK26480.1 putative amidohydrolase ytcJ [Cucumis melo var. makuwa])

HSP 1 Score: 159 bits (401), Expect = 7.44e-45
Identity = 77/93 (82.80%), Postives = 84/93 (90.32%), Query Frame = 0


Query: 1   MRKTDLIEVRLKIRHNYTGFIPAQINIMNSKGNISTVQTVSYTEGRWFKKRNANIHGSFN 60
           MRKTDLIEVRLKIRHNYTGFIPAQINI +SKGNI T+QTVS+TE RWFK+RNANIH  F 
Sbjct: 42  MRKTDLIEVRLKIRHNYTGFIPAQINIKDSKGNIFTIQTVSFTEERWFKERNANIHSYFT 101

Query: 61  KQAALEFNEFDFKAEKYSFMRFVSIPPEKKDKK 93
           +QAALEFNEFDF+AEKYSFM FV  PP+KKDKK
Sbjct: 102 RQAALEFNEFDFEAEKYSFMGFVVTPPKKKDKK 134

[Close]

BLAST of IVF0012709 vs. NCBI nr
Match: KAA0062230.1 (hypothetical protein E6C27_scaffold321G00310 [Cucumis melo var. makuwa])

HSP 1 Score: 142 bits (358), Expect = 6.17e-36
Identity = 109/289 (37.72%), Postives = 127/289 (43.94%), Query Frame = 0


Query: 1   MRKTDLIEVRLKIRHNYTGFIPAQINIMNSKGNISTVQTVSYTEGRWFKKRNANIHGSFN 60
           MRK DLIE RLKI+HNYTGFI AQINI NSKGNI T+ TVSYTEGRW             
Sbjct: 119 MRKADLIEARLKIKHNYTGFISAQINITNSKGNIFTIHTVSYTEGRW------------- 178

Query: 61  KQAALEFNEFDFKAEKYSFMRFVSIPPEKKDKKQRNPHKQNRNSNKRLAILNSRDSTSKA 120
                                                                       
Sbjct: 179 ------------------------------------------------------------ 238

Query: 121 IIISDNYDGGRGSDERLKSVISGKMDKGKDIMVFVDHHELLQKNKFPKRKVSFHSPKNKA 180
                      G+D RLK VISG+MDKGK IMVF D  E  +K  F KRK          
Sbjct: 239 -----------GNDGRLKFVISGQMDKGKGIMVFNDSQE--EKANFLKRKN--------- 282

Query: 181 FFYNPENALAKPLQIESPTFKGSPTSLDRIIKPLKISPPKATFIHKKKKSSQMIYKLNAK 240
                                         IKPLKI+P K T+  KKKKS + IY++   
Sbjct: 299 ------------------------------IKPLKINPLKGTYFQKKKKSPRKIYRVKNN 282

Query: 241 -----QIVDIEKKENAINLKVEMGNISPLHEKMEVEYVSSSDSPIMTSI 284
                ++V+ EKKE AINL +E+GNI PL E++EVE+VSS DSPIMT I
Sbjct: 359 HNKEIELVEAEKKEKAINLTMELGNIFPLPEELEVEHVSSPDSPIMTPI 282

The following BLAST results are available for this feature:

BLAST of IVF0012709 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0012709 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V6K4	4.2e-100	69.05	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3CAI5	6.1e-67	54.70	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7THF9	2.0e-65	56.13	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3DT94	1.1e-34	78.79	Putative amidohydrolase ytcJ OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A5A7V4L2	3.5e-30	37.72	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of IVF0012709 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0063733.1	7.03e-126	69.05	hypothetical protein E6C27_scaffold1290G00140 [Cucumis melo var. makuwa] >TYK109...	[more]
TYK07346.1	7.64e-84	54.86	hypothetical protein E5676_scaffold202G00620 [Cucumis melo var. makuwa]	[more]
KAA0040709.1	2.89e-80	56.13	hypothetical protein E6C27_scaffold529G00290 [Cucumis melo var. makuwa] >TYK1427...	[more]
KAA0047508.1	7.44e-45	82.80	putative amidohydrolase ytcJ [Cucumis melo var. makuwa] >TYK26480.1 putative ami...	[more]
KAA0062230.1	6.17e-36	37.72	hypothetical protein E6C27_scaffold321G00310 [Cucumis melo var. makuwa]	[more]

BLAST of IVF0012709 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0012709.2	IVF0012709.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016787	hydrolase activity