IVF0012694 (gene) Melon (IVF77) v1

Overview


Name	IVF0012694
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	beta-carotene isomerase D27, chloroplastic
Location	chr05: 3807093 .. 3811717 (-)
RNA-Seq Expression	IVF0012694
Synteny	IVF0012694

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAAAGTTTGTTGTAATCCTGAAGTTCTCCTTCCTCTCTCTCTTCTCTCTCAAAACAAAGAAATGGATTTAAGAGTTATTCAAGATACGACAGTCATTTTGCCAACAATGATGAACAACAACAAAATGAAGTTGAGAAGAAAAAACATTCTTTGTGTTGGGGTGCTCACAAGATCAGCAGAGGGTGAAGTAATAGAAGAAACAAGAAAAACCAAAACTGTTTATACAGATAATTGGTTTGATAAAATTGCCATAGACCATTTGTCTCAGGCAGTACAAGCAACATCAGGTTTTTTTCTTCTTTTCTCTACTTTGTTGTAAGATTTGGGAAAGATGGGGAAAACGAAGATTGATATTAGAATCATGATATGCAGGTTGGAGAAGCAAAAAGAGTGGATATGAAAGCTTGTTGGAAGTGACAACAATGGCATCGAGAAATTTCAACCACATCAAACAAAAAGAAGTTGTCATTCAAGCCCTTGGAAGGGCATTTCCAAAGCCAATCCTCTCTTTGGTAAACTTCATCCATTGTCATTTAACACTCCATTATGTTTCATTCATTACCATTTAATAACATTTACTATTCTTTTAGCTTTCTACCCTTCCCTCTCTTTCATGATCTATGTATCATATACGAATACCATGCATACATGTAAAATACCTATCACCAAACATACCATTAAATATGCAAAGTGTACTTACCTCAATTAACATGAATATATGCTGACGACCAAGAGATTAGTAATTTGAATTCTCATCTCCATTGCACTAAAACAAAAACATATCACAAAAGATTATGAATAGTCATTTCAAACTTACATTAACTTTTACTTTAACCTTTACTTTAACGTGACACAAATAATATCATTATTTTCAACAATTGATGTCATTTAAGAATCACATTTTTTGAAGTGGTCTTAAGTTTTTATGTATGTTTAATGTAGTGATTGTAATCTCCGACTTCACTTCATGCAGCTAAACTAACTCTATTACCTTAAATTATTTATTTACCTATTGTATTTGTCAATTATTAAATAATTCATTTAAGGTAAGTAATGCATGATCATTTCATCCTTGATGAATTTTGTTTGGGCCAAAATTTTGTCTTCCTAGTTTGGTCTCTCTTCTCCCGTCAACACTTGGGAGAATATAGCTAAGATCATTGCCTAGGTTAGAGCCTACTGAAAAACTATACCCTTCTCTAATTTTTCTTTCAAGTAATCATTGGGTTTAATAATTATTTCATTGTCCCGTCATTATATGGAAACAGTATCATCAAATGGTCACATTTTTTATGTTAGTTTTATTATAAATAATTATTGATTAAATAAGTATTAAAATGTTGCTTTTACTATTATTAATTCATCTCCATATATTCCATTTTACTATTATACCCTCACTCCTCCCAAGTCCCAACTATATGCCCTTGACACATAGTGGTGAACGAAGTGCAGATAAAAGCATTGCTACCGCAATCCAAATTCGCAAGGGAATATTTTGCTGCATTCACCACTGTCTTCTTTGCTTGGTTAGTTGGACCCTGCGAGGTAAGATGTTGTAAGTTTACCTAAAGGCCTCTTTATTTCCTCAGTGTATGTTCATATAAATCCAAGGACCTAATTGGACATTCACTTGCATGCATACACAAATACACACAAGAGAGGCTAATCTGAGCATAGCCAGACTATTAAGGCATATATGCTGACTAGTAGGTTAAAGGTTTCAATTCCCTATTTCACTGAGGCAAAGCATTAATATTTTCTTTCCTTCTATTAGAAAGTAGAGACTAACTTGTGATAGCATAGCTCAATTGTTAAGACAAGTATCATCAATCAATAGATTAAAAATTTAAATCCTATTATTACGACAAGTATCGTCAATCAAGAGAATAAATGTTTAAATCCTCTACCCACGTGTTGAATTCATCCGGTCCTCTATCTTCTGTATTGGAAAACTAAATAAGTGCTTGACACCACCATTTAAGACCGATGTCAAAGAATTTGCTGAGAATAGATAGTATTTAAACGGAGGATATTAAACAACCAAGATCAGAATTAGAAGAGATTCACAAGGTTGAAAAGACTGACATGAGGAGGCATACTGGTGGACATCAAGAACTTCACCTTTAGCACTATATTGAATATTATAATACGATTTTCAATGGCCAAGTTGATAAATCGGCAGTGTTTGAGGCACTAGTCCCTTCTAGACTTGTCCTGTCCCTACAAATCAAAGAAAGGTTATTGTGACGTAAGATATATGAACCAATTCTTTGGGAAAACTATGTTCTCTTCATGCTTAATCACTTTGACCCTTCCCCTTTCTAGACATTCCTTAAATTTAGATTAAAACAGCTGATCTGCCTAGATTGTAATGGAGGGAGGGATTGAAAAAGCACACACATGGAAGGAACAAGTATTTCTTTTTTTTCGATCATCTCATTCGTAAGACTGACAATGGTAACAAATGATTCTTACAGGTGAAGGAATCAGAATTCAAAGGGAAAAGAGAAAAGAATGTGGTTCAAATCCATAAGTGCAGGTAATTCCTTCTCGCATCAGAGTTTTATAATCAAGGCAATGCTATCTAAACGTTCATGGGGTCCCATTCTCACCTACCTGAGATACTTTCCACACCCAAAGAACCATTTGTCTATAATTACTACGCTTCTTCTAAACCCTTAGTACTGGATCACATTAAGTGATGTCCATCATTCACATCATTGAAAATTTGAAATTGTCCTAGTCAAAATTAACATTCAGCAAATCTATATTGCCCCTAAACATATCCCATTTATTTGCAGGTTCCTAGAGCAAACTAATTGTGCTGGAATGTGCATTAACCTATGCAAGTTTCCATGTCAGGATTTCATCAAAGATTCCTTAGGAATGCCTGTCACCATGGTCCCCAGTAAGTCTCCTCACTAACCTACCGATTCACCAACCAATTGCAGCAACCACATATTGTTTTCCCAAAAGAAAAACAAATTTCAACTTTTCAAAATAATAATGATATTAGTAAATTAAAAAAGATCAAATTCACACACACAGCAGCACATGGCAATTCTAGACACTAATTCAGGTTTCCAAACGATAAATGAAGACCATAATTCTTATTTCTCACCACTCTACAATATTTGGTTGCCAAGACAAATCATAGAAAATTAAATTATAGCTAGCCACATGGCTTGAGCACATTCCTTCAACACATTTTATATTAATTAGATTGGCTCTTCATTGATCATTAAGCCAACCTATGGTGGTTACCTCAAGGCAATTATAATATAAAAACTTCATATTCACATATAGAGGAATTTTAGAAGTAATTATTTCAGATGAATCTGTGTAGTCTAGTTGTGCGGACACTAAATAAAGTAAATCAGCTATAGTATAATGACCAATGACTGGTAGATCCATGAGCAAAAGTGAAATTACTATTAAAGCAACATTACCAGCACCAAATGGTGGAACGGATCATGTTTGTCAATGTGAATGGAGGGTCCCATGTACGAACCATTTTGGGTACAAAAGAACTGCAGGTAGGCCCCAACCAAGCTAAGTGGGATTCCAAACCTGCAGCTTAATTTTGCTACATGGTTATAATCCAAGAATTAAAAGCTGAATTTCCATCGTTAATCGATCATCAAGCAGAATTTCACACTGAGCCAATCATCGATCTTGTCCATGAATACATTAATCATCACAAGTGTAAAAAATGCAACCAAGAAGAGGCATTAGTATTAGGATGTTGATTGTGCACCATGATGTAACGAGTAGCTGGGAGCCATTAGTATTCATGTCAAGGACCAAGAAATGAATCAATATGCAGGGGGGAAGAAGCTTTAACGTGATTCCAATAACTGTCTTTTTCTTTGCAGATTTTGATGACATGAGCTGTGAGATGATATTTGGAAAGGAACCACCAGCTTCAATCGATGATCCAGCGCTTAAGCAACCATGTTACAAACTATGTATTTACCTTAACACAAGTCTTCTTCTTTCTTTTTTTATTATACCTTTTACTTCATTACCTGTAAGTGGAGAAGTCAAATATATTAAAAAAACTCACAGGGCTGGGTAGCAGGAATACAGCAGGCCTAAACGATATTTTTAGGGGGATGGTAATATGAGTTAAAAATGATTCTAATCTTCTTTGTTTACCTTTTGCAGGCAAAACGAAAGAGAAACATACAACAAACTGCTTCATTTAAAGCAAAGGGATGCTGAAAGATTTTTTTTTGGATAATATCCATTTGAGCTCCCAATTGTCTTTTGTTTCCAATATTTCTGAATTACAGGAGAACCTCTTTTCATCTTCATCTTCCAAGATGAACAGATAGTTTTACTGTTTAGGCATCAGAGAAAAAATAACTTTGCAGAATCTGGCTTTCTAGTCACTATATTGTTTCAAAGATGAAATCTACAATACTGTCAGATAACATGAATACAAATAAAAGCATGTATATAAGGAAAAGGGGTTAATATTCAGGAACTACGATCGATCATCCTCACGTGAAATGCTAAAATGGATAATATATTTCATAGTGTTTTATTAGAAAGAAAACTATCAAGATGGAACCACCATGCTAATCAGTATATTTATAGACCGGTGACCTATATACCTATA

mRNA sequence

CCAAAGTTTGTTGTAATCCTGAAGTTCTCCTTCCTCTCTCTCTTCTCTCTCAAAACAAAGAAATGGATTTAAGAGTTATTCAAGATACGACAGTCATTTTGCCAACAATGATGAACAACAACAAAATGAAGTTGAGAAGAAAAAACATTCTTTGTGTTGGGGTGCTCACAAGATCAGCAGAGGGTGAAGTAATAGAAGAAACAAGAAAAACCAAAACTGTTTATACAGATAATTGGTTTGATAAAATTGCCATAGACCATTTGTCTCAGGCAGTACAAGCAACATCAGGTTGGAGAAGCAAAAAGAGTGGATATGAAAGCTTGTTGGAAGTGACAACAATGGCATCGAGAAATTTCAACCACATCAAACAAAAAGAAGTTGTCATTCAAGCCCTTGGAAGGGCATTTCCAAAGCCAATCCTCTCTTTGATAAAAGCATTGCTACCGCAATCCAAATTCGCAAGGGAATATTTTGCTGCATTCACCACTGTCTTCTTTGCTTGGTTAGTTGGACCCTGCGAGGTGAAGGAATCAGAATTCAAAGGGAAAAGAGAAAAGAATGTGGTTCAAATCCATAAGTGCAGGTTCCTAGAGCAAACTAATTGTGCTGGAATGTGCATTAACCTATGCAAGTTTCCATGTCAGGATTTCATCAAAGATTCCTTAGGAATGCCTGTCACCATGGTCCCCAATTTTGATGACATGAGCTGTGAGATGATATTTGGAAAGGAACCACCAGCTTCAATCGATGATCCAGCGCTTAAGCAACCATGTTACAAACTATGCAAAACGAAAGAGAAACATACAACAAACTGCTTCATTTAAAGCAAAGGGATGCTGAAAGATTTTTTTTTGGATAATATCCATTTGAGCTCCCAATTGTCTTTTGTTTCCAATATTTCTGAATTACAGGAGAACCTCTTTTCATCTTCATCTTCCAAGATGAACAGATAGTTTTACTGTTTAGGCATCAGAGAAAAAATAACTTTGCAGAATCTGGCTTTCTAGTCACTATATTGTTTCAAAGATGAAATCTACAATACTGTCAGATAACATGAATACAAATAAAAGCATGTATATAAGGAAAAGGGGTTAATATTCAGGAACTACGATCGATCATCCTCACGTGAAATGCTAAAATGGATAATATATTTCATAGTGTTTTATTAGAAAGAAAACTATCAAGATGGAACCACCATGCTAATCAGTATATTTATAGACCGGTGACCTATATACCTATA

Coding sequence (CDS)

ATGGATTTAAGAGTTATTCAAGATACGACAGTCATTTTGCCAACAATGATGAACAACAACAAAATGAAGTTGAGAAGAAAAAACATTCTTTGTGTTGGGGTGCTCACAAGATCAGCAGAGGGTGAAGTAATAGAAGAAACAAGAAAAACCAAAACTGTTTATACAGATAATTGGTTTGATAAAATTGCCATAGACCATTTGTCTCAGGCAGTACAAGCAACATCAGGTTGGAGAAGCAAAAAGAGTGGATATGAAAGCTTGTTGGAAGTGACAACAATGGCATCGAGAAATTTCAACCACATCAAACAAAAAGAAGTTGTCATTCAAGCCCTTGGAAGGGCATTTCCAAAGCCAATCCTCTCTTTGATAAAAGCATTGCTACCGCAATCCAAATTCGCAAGGGAATATTTTGCTGCATTCACCACTGTCTTCTTTGCTTGGTTAGTTGGACCCTGCGAGGTGAAGGAATCAGAATTCAAAGGGAAAAGAGAAAAGAATGTGGTTCAAATCCATAAGTGCAGGTTCCTAGAGCAAACTAATTGTGCTGGAATGTGCATTAACCTATGCAAGTTTCCATGTCAGGATTTCATCAAAGATTCCTTAGGAATGCCTGTCACCATGGTCCCCAATTTTGATGACATGAGCTGTGAGATGATATTTGGAAAGGAACCACCAGCTTCAATCGATGATCCAGCGCTTAAGCAACCATGTTACAAACTATGCAAAACGAAAGAGAAACATACAACAAACTGCTTCATTTAA

Protein sequence

MDLRVIQDTTVILPTMMNNNKMKLRRKNILCVGVLTRSAEGEVIEETRKTKTVYTDNWFDKIAIDHLSQAVQATSGWRSKKSGYESLLEVTTMASRNFNHIKQKEVVIQALGRAFPKPILSLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQTNCAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCYKLCKTKEKHTTNCFI

Homology

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BLAST of IVF0012694 vs. ExPASy Swiss-Prot
Match: R4HZ96 (Beta-carotene isomerase D27, chloroplastic OS=Medicago truncatula OX=3880 GN=D27 PE=1 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 2.9e-89
Identity = 154/251 (61.35%), Postives = 194/251 (77.29%), Query Frame = 0


Query: 1   MDLRVIQDTTVILPTMMNNNKMKLRRKNILCVGVLTRSAEGEVIEETRKTKTVYTDNWFD 60
           MD ++I     + PT+    K++L+ K+   VGVL R  + ++ EET +   VY DNWFD
Sbjct: 1   MDSKMIAHNMSLTPTLAQWKKLRLKPKHTFVVGVLARPTD-DISEETLRKTNVYKDNWFD 60

Query: 61  KIAIDHLSQAVQATSGWRSKKSGYESLLEVTTMASRNFNHIKQKEVVIQALGRAFPKPIL 120
           K+AI+HLS++VQA +G  + KSG++SL+E  T+AS+ FN  +Q+ +++ AL RAFPKPIL
Sbjct: 61  KLAINHLSKSVQAATGISNNKSGFDSLVEAATVASQKFNTTQQQGIILDALDRAFPKPIL 120

Query: 121 SLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQTN 180
           S+I+ ++P SK AREYFA FTT+FFAWL+GP EV+ESE  G+REKN+V I KCRFLE+TN
Sbjct: 121 SVIRRVMPPSKLAREYFAVFTTIFFAWLLGPSEVRESEINGRREKNIVHIKKCRFLEETN 180

Query: 181 CAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCYKL 240
           C GMCINLCK P Q FIKDS GMPV MVPNFDDMSCEMIFG+EPPAS DDPALKQPCYKL
Sbjct: 181 CVGMCINLCKMPSQLFIKDSFGMPVNMVPNFDDMSCEMIFGQEPPASTDDPALKQPCYKL 240

Query: 241 CKTKEKHTTNC 252
           CK K+ H T C
Sbjct: 241 CKAKKNHATQC 250

[Close]

BLAST of IVF0012694 vs. ExPASy Swiss-Prot
Match: C7AU21 (Beta-carotene isomerase D27, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=D27 PE=1 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 7.9e-71
Identity = 127/203 (62.56%), Postives = 156/203 (76.85%), Query Frame = 0


Query: 52  TVYTDNWFDKIAIDHLSQAVQATSGWRSKKSGYESLLEVTTMASRNFNHIKQKEVVIQAL 111
           TVY D+WFDK+AI +LS+ +Q  SG +++K GYESL++     SR F+  KQ E+V QAL
Sbjct: 78  TVYRDSWFDKLAIGYLSRNLQEASGLKNEKDGYESLIDAALAISRIFSLDKQSEIVTQAL 137

Query: 112 GRAFPKPILSLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIH 171
            RA P  IL++IK ++P S+F+REYFAAFTT+FF WLVGPCEV ESE +G++EKNVV I 
Sbjct: 138 ERALPSYILTMIKVMMPPSRFSREYFAAFTTIFFPWLVGPCEVMESEVEGRKEKNVVYIP 197

Query: 172 KCRFLEQTNCAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDP 231
           KCRFLE TNC GMC NLCK PCQ FI+DSLGM V M PNF+DMSCEMIFG++PP   DDP
Sbjct: 198 KCRFLESTNCVGMCTNLCKIPCQKFIQDSLGMKVYMSPNFEDMSCEMIFGQQPPE--DDP 257

Query: 232 ALKQPCYKL-CKTKEKHTTNCFI 254
           ALKQPC++  C  K+ H  NC I
Sbjct: 258 ALKQPCFRTKCVAKQNHGVNCSI 278

[Close]

BLAST of IVF0012694 vs. ExPASy Swiss-Prot
Match: Q7XA78 (Beta-carotene isomerase D27, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=D27 PE=1 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.7e-57
Identity = 109/217 (50.23%), Postives = 150/217 (69.12%), Query Frame = 0


Query: 33  GVLTRSAEGEVIEETRKTKTVYTDNWFDKIAIDHLSQAVQATSG--WRSKKSGYESLLEV 92
           G L  + E   IE +        D++F KIAI++LS+ +Q  +G    SK + Y+ L++ 
Sbjct: 44  GKLKAAKETARIETSNTKNASIEDSFFSKIAINYLSKNLQDAAGISSSSKSTDYDRLVDT 103

Query: 93  TTMASRNFNHIKQKEVVIQALGRAFPKPILSLIKALLPQSKFAREYFAAFTTVFFAWLVG 152
            T  SRNF+  +Q E V+ +L RA P  I SLIK   P SK +RE FA FTT+ FAWLVG
Sbjct: 104 ATRVSRNFDTKQQHEFVLSSLDRALPTVISSLIKMAFPPSKVSRELFALFTTISFAWLVG 163

Query: 153 PCEVKESEFKGKREKNVVQIHKCRFLEQTNCAGMCINLCKFPCQDFIKDSLGMPVTMVPN 212
           P EV+E+E  G++EK+VV I KCRFLEQ+NC GMC ++CK P Q FIK+SLGMP+ M P+
Sbjct: 164 PSEVRETEVNGRKEKSVVYIEKCRFLEQSNCVGMCTHICKIPSQIFIKNSLGMPIYMEPD 223

Query: 213 FDDMSCEMIFGKEPPASIDDPALKQPCYKLCKTKEKH 248
           F+D+SC+M+FG+EPP   DDPA+KQPC++ CK+ + +
Sbjct: 224 FNDLSCKMMFGREPPEIEDDPAMKQPCFEFCKSNKSY 260

[Close]

BLAST of IVF0012694 vs. ExPASy TrEMBL
Match: A0A5D3E3G1 (Beta-carotene isomerase D27 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00920 PE=4 SV=1)

HSP 1 Score: 519.2 bits (1336), Expect = 9.4e-144
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0


Query: 1   MDLRVIQDTTVILPTMMNNNKMKLRRKNILCVGVLTRSAEGEVIEETRKTKTVYTDNWFD 60
           MDLRVIQDTTVILPTMMNNNKMKLRRKNILCVGVLTRSAEGEVIEETRKTKTVYTDNWFD
Sbjct: 1   MDLRVIQDTTVILPTMMNNNKMKLRRKNILCVGVLTRSAEGEVIEETRKTKTVYTDNWFD 60

Query: 61  KIAIDHLSQAVQATSGWRSKKSGYESLLEVTTMASRNFNHIKQKEVVIQALGRAFPKPIL 120
           KIAIDHLSQAVQATSGWRSKKSGYESLLEVTTMASRNFNHIKQKEVVIQALGRAFPKPIL
Sbjct: 61  KIAIDHLSQAVQATSGWRSKKSGYESLLEVTTMASRNFNHIKQKEVVIQALGRAFPKPIL 120

Query: 121 SLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQTN 180
           SLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQTN
Sbjct: 121 SLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQTN 180

Query: 181 CAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCYKL 240
           CAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCYKL
Sbjct: 181 CAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCYKL 240

Query: 241 CKTKEKHTTNCFI 254
           CKTKEKHTTNCFI
Sbjct: 241 CKTKEKHTTNCFI 253

[Close]

BLAST of IVF0012694 vs. ExPASy TrEMBL
Match: A0A1S3BL84 (LOW QUALITY PROTEIN: beta-carotene isomerase D27, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491262 PE=4 SV=1)

HSP 1 Score: 510.0 bits (1312), Expect = 5.7e-141
Identity = 249/253 (98.42%), Postives = 249/253 (98.42%), Query Frame = 0


Query: 1   MDLRVIQDTTVILPTMMNNNKMKLRRKNILCVGVLTRSAEGEVIEETRKTKTVYTDNWFD 60
           MDLRVIQDTTVILPTMMNNNKMKLRRK    VGVLTRSAEGEVIEETRKTKTVYTDNWFD
Sbjct: 1   MDLRVIQDTTVILPTMMNNNKMKLRRKTFFXVGVLTRSAEGEVIEETRKTKTVYTDNWFD 60

Query: 61  KIAIDHLSQAVQATSGWRSKKSGYESLLEVTTMASRNFNHIKQKEVVIQALGRAFPKPIL 120
           KIAIDHLSQAVQATSGWRSKKSGYESLLEVTTMASRNFNHIKQKEVVIQALGRAFPKPIL
Sbjct: 61  KIAIDHLSQAVQATSGWRSKKSGYESLLEVTTMASRNFNHIKQKEVVIQALGRAFPKPIL 120

Query: 121 SLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQTN 180
           SLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQTN
Sbjct: 121 SLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQTN 180

Query: 181 CAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCYKL 240
           CAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCYKL
Sbjct: 181 CAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCYKL 240

Query: 241 CKTKEKHTTNCFI 254
           CKTKEKHTTNCFI
Sbjct: 241 CKTKEKHTTNCFI 253

[Close]

BLAST of IVF0012694 vs. ExPASy TrEMBL
Match: A0A0A0LIR1 (DUF4033 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G226860 PE=4 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 1.2e-138
Identity = 244/253 (96.44%), Postives = 247/253 (97.63%), Query Frame = 0


Query: 1   MDLRVIQDTTVILPTMMNNNKMKLRRKNILCVGVLTRSAEGEVIEETRKTKTVYTDNWFD 60
           MDLRVIQDT VILPTMMNNNKMKLRRK+ILC GVLTR AEGE+IEETRKT TVYTDNWFD
Sbjct: 1   MDLRVIQDTRVILPTMMNNNKMKLRRKSILCFGVLTRPAEGELIEETRKTNTVYTDNWFD 60

Query: 61  KIAIDHLSQAVQATSGWRSKKSGYESLLEVTTMASRNFNHIKQKEVVIQALGRAFPKPIL 120
           KIAIDHLSQAVQATSGWRSKKSGYESL+EVTTMASRNFNHIKQKEVVIQALG AFPKPIL
Sbjct: 61  KIAIDHLSQAVQATSGWRSKKSGYESLVEVTTMASRNFNHIKQKEVVIQALGMAFPKPIL 120

Query: 121 SLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQTN 180
           SLIKALLPQSK AREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQTN
Sbjct: 121 SLIKALLPQSKLAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQTN 180

Query: 181 CAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCYKL 240
           CAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCYKL
Sbjct: 181 CAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCYKL 240

Query: 241 CKTKEKHTTNCFI 254
           CKTKEKHTTNCFI
Sbjct: 241 CKTKEKHTTNCFI 253

[Close]

BLAST of IVF0012694 vs. ExPASy TrEMBL
Match: A0A6J1HUP9 (beta-carotene isomerase D27, chloroplastic-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111466998 PE=4 SV=1)

HSP 1 Score: 436.4 bits (1121), Expect = 8.0e-119
Identity = 210/257 (81.71%), Postives = 231/257 (89.88%), Query Frame = 0


Query: 1   MDLRVIQDTTVILPTMMN----NNKMKLRRKNILCVGVLTRSAEGEVIEETRKTKTVYTD 60
           M++RV ++  VIL +  N    N   K+RRK+I CV VLTR+AE    EETRK  TVYTD
Sbjct: 1   MEVRVGEERRVILGSGTNVRRSNKTKKMRRKSIACVAVLTRAAESGATEETRKPNTVYTD 60

Query: 61  NWFDKIAIDHLSQAVQATSGWRSKKSGYESLLEVTTMASRNFNHIKQKEVVIQALGRAFP 120
           NWF+KIAI H+SQAVQATSGWRSKKSGYESL+EV TMASRN+N IKQ+EV+IQALGRAFP
Sbjct: 61  NWFEKIAIHHVSQAVQATSGWRSKKSGYESLVEVATMASRNYNQIKQREVIIQALGRAFP 120

Query: 121 KPILSLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFL 180
            PILSLI+ LLPQSKFAREYFAAFTTVFFAWLVGPCEVKES+FKGK+EKNVVQIHKCRFL
Sbjct: 121 APILSLIRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGKKEKNVVQIHKCRFL 180

Query: 181 EQTNCAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQP 240
           EQTNCAGMCINLCKFPCQDFIKDSLGMPV+MVPNFDDMSCEMIFGK+PPA++DDPALKQP
Sbjct: 181 EQTNCAGMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQP 240

Query: 241 CYKLCKTKEKHTTNCFI 254
           CYKLCKTKEKHTTNCFI
Sbjct: 241 CYKLCKTKEKHTTNCFI 257

[Close]

BLAST of IVF0012694 vs. ExPASy TrEMBL
Match: A0A6J1HHC5 (beta-carotene isomerase D27, chloroplastic-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111464069 PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 5.2e-118
Identity = 210/257 (81.71%), Postives = 229/257 (89.11%), Query Frame = 0


Query: 1   MDLRVIQDTTVILPTMMN----NNKMKLRRKNILCVGVLTRSAEGEVIEETRKTKTVYTD 60
           M++RV +   VIL +  N    N   K+RRK+I CV VLTR+AE    EETRK  TVYTD
Sbjct: 1   MEVRVGEVRRVILGSGTNVRRSNKTKKMRRKSIACVAVLTRAAESGATEETRKPNTVYTD 60

Query: 61  NWFDKIAIDHLSQAVQATSGWRSKKSGYESLLEVTTMASRNFNHIKQKEVVIQALGRAFP 120
           NWF+KIAI H+SQAVQATSGWRS KSGYESL+EV TMASRN+N IKQ+EV+IQALGRAFP
Sbjct: 61  NWFEKIAIHHVSQAVQATSGWRSNKSGYESLVEVATMASRNYNQIKQREVIIQALGRAFP 120

Query: 121 KPILSLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFL 180
            PILSLI+ LLPQSKFAREYFAAFTTVFFAWLVGPCEVKES+FKGKREKNVVQIHKCRFL
Sbjct: 121 APILSLIRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGKREKNVVQIHKCRFL 180

Query: 181 EQTNCAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQP 240
           EQTNCAGMCINLCKFPCQDFIKDSLGMPV+MVPNFDDMSCEMIFGK+PPA++DDPALKQP
Sbjct: 181 EQTNCAGMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQP 240

Query: 241 CYKLCKTKEKHTTNCFI 254
           CYKLCKTKEKHTTNCFI
Sbjct: 241 CYKLCKTKEKHTTNCFI 257

[Close]

BLAST of IVF0012694 vs. NCBI nr
Match: KAA0057411.1 (beta-carotene isomerase D27 [Cucumis melo var. makuwa] >TYK30110.1 beta-carotene isomerase D27 [Cucumis melo var. makuwa])

HSP 1 Score: 519 bits (1337), Expect = 5.86e-186
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0


Query: 1   MDLRVIQDTTVILPTMMNNNKMKLRRKNILCVGVLTRSAEGEVIEETRKTKTVYTDNWFD 60
           MDLRVIQDTTVILPTMMNNNKMKLRRKNILCVGVLTRSAEGEVIEETRKTKTVYTDNWFD
Sbjct: 1   MDLRVIQDTTVILPTMMNNNKMKLRRKNILCVGVLTRSAEGEVIEETRKTKTVYTDNWFD 60

Query: 61  KIAIDHLSQAVQATSGWRSKKSGYESLLEVTTMASRNFNHIKQKEVVIQALGRAFPKPIL 120
           KIAIDHLSQAVQATSGWRSKKSGYESLLEVTTMASRNFNHIKQKEVVIQALGRAFPKPIL
Sbjct: 61  KIAIDHLSQAVQATSGWRSKKSGYESLLEVTTMASRNFNHIKQKEVVIQALGRAFPKPIL 120

Query: 121 SLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQTN 180
           SLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQTN
Sbjct: 121 SLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQTN 180

Query: 181 CAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCYKL 240
           CAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCYKL
Sbjct: 181 CAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCYKL 240

Query: 241 CKTKEKHTTNCFI 253
           CKTKEKHTTNCFI
Sbjct: 241 CKTKEKHTTNCFI 253

[Close]

BLAST of IVF0012694 vs. NCBI nr
Match: XP_008449360.1 (PREDICTED: LOW QUALITY PROTEIN: beta-carotene isomerase D27, chloroplastic [Cucumis melo])

HSP 1 Score: 510 bits (1313), Expect = 2.68e-182
Identity = 249/253 (98.42%), Postives = 249/253 (98.42%), Query Frame = 0


Query: 1   MDLRVIQDTTVILPTMMNNNKMKLRRKNILCVGVLTRSAEGEVIEETRKTKTVYTDNWFD 60
           MDLRVIQDTTVILPTMMNNNKMKLRRK    VGVLTRSAEGEVIEETRKTKTVYTDNWFD
Sbjct: 1   MDLRVIQDTTVILPTMMNNNKMKLRRKTFFXVGVLTRSAEGEVIEETRKTKTVYTDNWFD 60

Query: 61  KIAIDHLSQAVQATSGWRSKKSGYESLLEVTTMASRNFNHIKQKEVVIQALGRAFPKPIL 120
           KIAIDHLSQAVQATSGWRSKKSGYESLLEVTTMASRNFNHIKQKEVVIQALGRAFPKPIL
Sbjct: 61  KIAIDHLSQAVQATSGWRSKKSGYESLLEVTTMASRNFNHIKQKEVVIQALGRAFPKPIL 120

Query: 121 SLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQTN 180
           SLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQTN
Sbjct: 121 SLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQTN 180

Query: 181 CAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCYKL 240
           CAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCYKL
Sbjct: 181 CAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCYKL 240

Query: 241 CKTKEKHTTNCFI 253
           CKTKEKHTTNCFI
Sbjct: 241 CKTKEKHTTNCFI 253

[Close]

BLAST of IVF0012694 vs. NCBI nr
Match: XP_004145371.1 (beta-carotene isomerase D27, chloroplastic [Cucumis sativus] >KGN61698.1 hypothetical protein Csa_006159 [Cucumis sativus])

HSP 1 Score: 502 bits (1293), Expect = 3.00e-179
Identity = 244/253 (96.44%), Postives = 247/253 (97.63%), Query Frame = 0


Query: 1   MDLRVIQDTTVILPTMMNNNKMKLRRKNILCVGVLTRSAEGEVIEETRKTKTVYTDNWFD 60
           MDLRVIQDT VILPTMMNNNKMKLRRK+ILC GVLTR AEGE+IEETRKT TVYTDNWFD
Sbjct: 1   MDLRVIQDTRVILPTMMNNNKMKLRRKSILCFGVLTRPAEGELIEETRKTNTVYTDNWFD 60

Query: 61  KIAIDHLSQAVQATSGWRSKKSGYESLLEVTTMASRNFNHIKQKEVVIQALGRAFPKPIL 120
           KIAIDHLSQAVQATSGWRSKKSGYESL+EVTTMASRNFNHIKQKEVVIQALG AFPKPIL
Sbjct: 61  KIAIDHLSQAVQATSGWRSKKSGYESLVEVTTMASRNFNHIKQKEVVIQALGMAFPKPIL 120

Query: 121 SLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQTN 180
           SLIKALLPQSK AREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQTN
Sbjct: 121 SLIKALLPQSKLAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQTN 180

Query: 181 CAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCYKL 240
           CAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCYKL
Sbjct: 181 CAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCYKL 240

Query: 241 CKTKEKHTTNCFI 253
           CKTKEKHTTNCFI
Sbjct: 241 CKTKEKHTTNCFI 253

[Close]

BLAST of IVF0012694 vs. NCBI nr
Match: XP_038888067.1 (beta-carotene isomerase D27, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 471 bits (1211), Expect = 9.85e-167
Identity = 230/254 (90.55%), Postives = 240/254 (94.49%), Query Frame = 0


Query: 1   MDLRVIQDTTVILPTMMNNNKMK-LRRKNILCVGVLTRSAEGEVIEETRKTKTVYTDNWF 60
           MDLRVIQ+  VILPTMMNNNKMK L RK++ CV VLTR AE  VIEETRKT TVYTDNWF
Sbjct: 1   MDLRVIQERRVILPTMMNNNKMKKLGRKSLPCVAVLTRPAESGVIEETRKTNTVYTDNWF 60

Query: 61  DKIAIDHLSQAVQATSGWRSKKSGYESLLEVTTMASRNFNHIKQKEVVIQALGRAFPKPI 120
           DKIAI HLSQAVQATSGWRSKKSGYESL+EVTTMASRNFN IKQ+EVVIQALGRAFPKPI
Sbjct: 61  DKIAIHHLSQAVQATSGWRSKKSGYESLVEVTTMASRNFNQIKQREVVIQALGRAFPKPI 120

Query: 121 LSLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQT 180
           LSLIKAL+PQSKFAREYFA FTTVFFAWLVGPCEVKESEF+GKREKNVVQIHKCRFLEQT
Sbjct: 121 LSLIKALVPQSKFAREYFAVFTTVFFAWLVGPCEVKESEFEGKREKNVVQIHKCRFLEQT 180

Query: 181 NCAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCYK 240
           NCAGMCINLCKFPCQDFIKDSLGMPV+MVPNFDDMSCEMIFGK+PPA IDDPALKQPCYK
Sbjct: 181 NCAGMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAPIDDPALKQPCYK 240

Query: 241 LCKTKEKHTTNCFI 253
           LCK+KEKHTTNCFI
Sbjct: 241 LCKSKEKHTTNCFI 254

[Close]

BLAST of IVF0012694 vs. NCBI nr
Match: XP_038888066.1 (beta-carotene isomerase D27, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 446 bits (1148), Expect = 9.03e-157
Identity = 219/242 (90.50%), Postives = 228/242 (94.21%), Query Frame = 0


Query: 1   MDLRVIQDTTVILPTMMNNNKMK-LRRKNILCVGVLTRSAEGEVIEETRKTKTVYTDNWF 60
           MDLRVIQ+  VILPTMMNNNKMK L RK++ CV VLTR AE  VIEETRKT TVYTDNWF
Sbjct: 1   MDLRVIQERRVILPTMMNNNKMKKLGRKSLPCVAVLTRPAESGVIEETRKTNTVYTDNWF 60

Query: 61  DKIAIDHLSQAVQATSGWRSKKSGYESLLEVTTMASRNFNHIKQKEVVIQALGRAFPKPI 120
           DKIAI HLSQAVQATSGWRSKKSGYESL+EVTTMASRNFN IKQ+EVVIQALGRAFPKPI
Sbjct: 61  DKIAIHHLSQAVQATSGWRSKKSGYESLVEVTTMASRNFNQIKQREVVIQALGRAFPKPI 120

Query: 121 LSLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQT 180
           LSLIKAL+PQSKFAREYFA FTTVFFAWLVGPCEVKESEF+GKREKNVVQIHKCRFLEQT
Sbjct: 121 LSLIKALVPQSKFAREYFAVFTTVFFAWLVGPCEVKESEFEGKREKNVVQIHKCRFLEQT 180

Query: 181 NCAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCYK 240
           NCAGMCINLCKFPCQDFIKDSLGMPV+MVPNFDDMSCEMIFGK+PPA IDDPALKQPCYK
Sbjct: 181 NCAGMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAPIDDPALKQPCYK 240

[Close]

BLAST of IVF0012694 vs. TAIR 10
Match: AT1G03055.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64680.1); Has 143 Blast hits to 143 proteins in 26 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). )

HSP 1 Score: 224.2 bits (570), Expect = 1.2e-58
Identity = 109/217 (50.23%), Postives = 150/217 (69.12%), Query Frame = 0


Query: 33  GVLTRSAEGEVIEETRKTKTVYTDNWFDKIAIDHLSQAVQATSG--WRSKKSGYESLLEV 92
           G L  + E   IE +        D++F KIAI++LS+ +Q  +G    SK + Y+ L++ 
Sbjct: 44  GKLKAAKETARIETSNTKNASIEDSFFSKIAINYLSKNLQDAAGISSSSKSTDYDRLVDT 103

Query: 93  TTMASRNFNHIKQKEVVIQALGRAFPKPILSLIKALLPQSKFAREYFAAFTTVFFAWLVG 152
            T  SRNF+  +Q E V+ +L RA P  I SLIK   P SK +RE FA FTT+ FAWLVG
Sbjct: 104 ATRVSRNFDTKQQHEFVLSSLDRALPTVISSLIKMAFPPSKVSRELFALFTTISFAWLVG 163

Query: 153 PCEVKESEFKGKREKNVVQIHKCRFLEQTNCAGMCINLCKFPCQDFIKDSLGMPVTMVPN 212
           P EV+E+E  G++EK+VV I KCRFLEQ+NC GMC ++CK P Q FIK+SLGMP+ M P+
Sbjct: 164 PSEVRETEVNGRKEKSVVYIEKCRFLEQSNCVGMCTHICKIPSQIFIKNSLGMPIYMEPD 223

Query: 213 FDDMSCEMIFGKEPPASIDDPALKQPCYKLCKTKEKH 248
           F+D+SC+M+FG+EPP   DDPA+KQPC++ CK+ + +
Sbjct: 224 FNDLSCKMMFGREPPEIEDDPAMKQPCFEFCKSNKSY 260

[Close]

BLAST of IVF0012694 vs. TAIR 10
Match: AT1G64680.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03055.1); Has 146 Blast hits to 146 proteins in 26 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). )

HSP 1 Score: 154.1 bits (388), Expect = 1.5e-37
Identity = 75/195 (38.46%), Postives = 114/195 (58.46%), Query Frame = 0


Query: 51  KTVYTDNWFDKIAIDHLSQAVQATSGWRSKKS--------GYESLLEVTTMASRNFNHIK 110
           KT Y D   +++ +   ++ +      + K +         YES +EV+    +  + ++
Sbjct: 36  KTRYEDGLVERVFMGLFARKMDKFGSKKKKDTKEKGFWEYDYESFVEVSKRVMQGRSRVQ 95

Query: 111 QKEVVIQALGRAFPKPILSLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGK 170
           Q+E V + L    P       + L P +K+A E+ AA T  FF WLVGP +V E E  G 
Sbjct: 96  QQEAVREVLLSMLPPGAPEQFRKLFPPTKWAAEFNAALTVPFFHWLVGPSQVIEVEVNGV 155

Query: 171 REKNVVQIHKCRFLEQTNCAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGK 230
           ++++ V+I KCR+LE + C GMC+N+CK P QDF  +  G+P+TM PN++DMSCEMI+G+
Sbjct: 156 KQRSGVRIKKCRYLENSGCVGMCVNMCKIPTQDFFTNEFGLPLTMNPNYEDMSCEMIYGQ 215

Query: 231 EPPASIDDPALKQPC 238
            PPA  +D A KQPC
Sbjct: 216 APPAFEEDVATKQPC 230

[Close]

BLAST of IVF0012694 vs. TAIR 10
Match: AT1G03055.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64680.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 119.8 bits (299), Expect = 3.2e-27
Identity = 66/144 (45.83%), Postives = 90/144 (62.50%), Query Frame = 0


Query: 33  GVLTRSAEGEVIEETRKTKTVYTDNWFDKIAIDHLSQAVQATSG--WRSKKSGYESLLEV 92
           G L  + E   IE +        D++F KIAI++LS+ +Q  +G    SK + Y+ L++ 
Sbjct: 44  GKLKAAKETARIETSNTKNASIEDSFFSKIAINYLSKNLQDAAGISSSSKSTDYDRLVDT 103

Query: 93  TTMASRNFNHIKQKEVVIQALGRAFPKPILSLIKALLPQSKFAREYFAAFTTVFFAWLVG 152
            T  SRNF+  +Q E V+ +L RA P  I SLIK   P SK +RE FA FTT+ FAWLVG
Sbjct: 104 ATRVSRNFDTKQQHEFVLSSLDRALPTVISSLIKMAFPPSKVSRELFALFTTISFAWLVG 163

Query: 153 PCEVKESEFKGKREKNVVQIHKCR 175
           P EV+E+E  G++EK+VV I KCR
Sbjct: 164 PSEVRETEVNGRKEKSVVYIEKCR 187

[Close]

BLAST of IVF0012694 vs. TAIR 10
Match: AT4G01995.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 113.2 bits (282), Expect = 3.0e-25
Identity = 68/209 (32.54%), Postives = 100/209 (47.85%), Query Frame = 0


Query: 38  SAEGEVIEETRKTKTVYTDNWFDKIAIDHLSQAVQATSGWRSKKSGYESLLE-VTTMASR 97
           S   EV  +    K  Y     D   +      +    G  S+K GY  L+E V  +  +
Sbjct: 36  SNSSEVKSDEGAPKLEYKPGPLDDFFMQSFRNKLVEEVGSDSEKPGYVGLIELVKLLLLK 95

Query: 98  NFNHIKQKEVVIQALGRAFPKPILSLIKAL---LPQSKFAREYFAAFTTVFFAWLVGPCE 157
                +  +  ++ L   FP  IL L K L   + Q K A    A  T +   WL+GP +
Sbjct: 96  GRTRSETSDAAVRILKSLFPPLILELYKLLIAPIAQGKLAALMVARVTVLTCQWLMGPSK 155

Query: 158 VKESEF-KGKREKNVVQIHKCRFLEQTNCAGMCINLCKFPCQDFIKDSLGMPVTMVPNFD 217
           V   +   G+   + V + KC++LE++ C G+CIN CK P Q F KD +G+P+ M PNF 
Sbjct: 156 VNIIDLPNGESWDSGVFVEKCQYLEESKCVGVCINTCKLPTQTFFKDYMGVPLVMEPNFK 215

Query: 218 DMSCEMIFGKEPPASIDDPALKQPCYKLC 242
           D SC+  FG  PP   DD  + +PC++ C
Sbjct: 216 DYSCQFKFGVAPPE--DDGNVNEPCFETC 242

The following BLAST results are available for this feature:

BLAST of IVF0012694 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
R4HZ96	2.9e-89	61.35	Beta-carotene isomerase D27, chloroplastic OS=Medicago truncatula OX=3880 GN=D27...	[more]
C7AU21	7.9e-71	62.56	Beta-carotene isomerase D27, chloroplastic OS=Oryza sativa subsp. japonica OX=39...	[more]
Q7XA78	1.7e-57	50.23	Beta-carotene isomerase D27, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=D2...	[more]

BLAST of IVF0012694 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E3G1	9.4e-144	100.00	Beta-carotene isomerase D27 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3BL84	5.7e-141	98.42	LOW QUALITY PROTEIN: beta-carotene isomerase D27, chloroplastic OS=Cucumis melo ...	[more]
A0A0A0LIR1	1.2e-138	96.44	DUF4033 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G226860 PE=...	[more]
A0A6J1HUP9	8.0e-119	81.71	beta-carotene isomerase D27, chloroplastic-like isoform X3 OS=Cucurbita maxima O...	[more]
A0A6J1HHC5	5.2e-118	81.71	beta-carotene isomerase D27, chloroplastic-like isoform X3 OS=Cucurbita moschata...	[more]

BLAST of IVF0012694 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0057411.1	5.86e-186	100.00	beta-carotene isomerase D27 [Cucumis melo var. makuwa] >TYK30110.1 beta-carotene...	[more]
XP_008449360.1	2.68e-182	98.42	PREDICTED: LOW QUALITY PROTEIN: beta-carotene isomerase D27, chloroplastic [Cucu...	[more]
XP_004145371.1	3.00e-179	96.44	beta-carotene isomerase D27, chloroplastic [Cucumis sativus] >KGN61698.1 hypothe...	[more]
XP_038888067.1	9.85e-167	90.55	beta-carotene isomerase D27, chloroplastic isoform X2 [Benincasa hispida]	[more]
XP_038888066.1	9.03e-157	90.50	beta-carotene isomerase D27, chloroplastic isoform X1 [Benincasa hispida]	[more]

BLAST of IVF0012694 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G03055.1	1.2e-58	50.23	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G64680.1	1.5e-37	38.46	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G03055.2	3.2e-27	45.83	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G01995.1	3.0e-25	32.54	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025114	Beta-carotene isomerase D27-like, C-terminal	PFAM	PF13225	DUF4033	coord: 147..226 e-value: 9.8E-34 score: 115.2
None	No IPR available	PANTHER	PTHR33591:SF1	BETA-CAROTENE ISOMERASE D27, CHLOROPLASTIC	coord: 16..249
IPR038938	Beta-carotene isomerase D27-like	PANTHER	PTHR33591	BETA-CAROTENE ISOMERASE D27	coord: 16..249

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0012694.1	IVF0012694.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010223	secondary shoot formation
biological_process	GO:1901601	strigolactone biosynthetic process
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0016859	cis-trans isomerase activity
molecular_function	GO:0005506	iron ion binding