IVF0012667 (gene) Melon (IVF77) v1

Overview


Name	IVF0012667
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chr06: 18311182 .. 18313151 (+)
RNA-Seq Expression	IVF0012667
Synteny	IVF0012667

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAAGCCCAGGCCATGGCCGCGGCGTCGGCAATGTTCAAAATCTTGAGCAGGTCTTCTTCAGGTTGCACGAGAACACCAAGACCCGAAACAGATGCATTCTGTTTTGTGGCGTTGAGATTATACAGTACGAGACGAAGCTGCAATAGAAGAAAACTCTATGCGATGATTAGTCCTCTCGGTGACCCTGACAGTAGTGTAGTTCCGGTTCTTAATCATGGATTAAGGAAGGCAGGAAGATCAAGGACTTTGAGCTCCGAAGAATCGTTCGTGACCTTCGTACTTGCCGGCGGTATCGCCAAGCCCTTGAGGTGAGCGCAATTGAAAATGACACCCTAATTTCCCGTGAAAGGAATGCTTGTATTGTATATGATGTCTCATGTCTGTTGGATGAAGCAAAATTCTTCTGGTTTATTGAATGAATGAATGATGGCCGTAGAGTAATCTCAAATCCTTCTTCGTTTCTATTCTCATAATGCTTTGATTGATTGCTGGAAATTTAAACTTTGAAGTAATCACAAGTAGTTAAGCTAATTGTGCTTTTACACTCACCTTCATTAAATTGTGGCTCTAGAGGATAGAAAATTTTATGTCGAGTAATAACCATTGTTGAATTCTTGTGGTTAACTTAGTACTAGGTTGATACTGATACCCTAAGCTGTCTTATCCCGTTTGGTGTTTCATCAGTCCTAGATTATCTATAGTATCATACTGTTATGGATGGTTGATCTTTGTTCTTTTTCTTGGATTGTTCAAATTGAAGGTGTCTGAATGGATGTGTAGCAAGGGACGTTTTTCCCTCACAACAAGAGACTTTGCCATCCAGCTCGATCTGATTGGCCAAGTTCGGGGGTTGGATTCTGCAGAGAAGTATTTTGGGAGTGTCTCCAAACAAAAGGAAATTGGTAAACTCTATGGTGCTCTTCTAAATTGTTATGTCAGGGAAGGCCTTATAGATAAGTCCCTTGCCCATATGCAGAAGATGAAGGAGATGGGTTTTGCTTCCTCTCCCCTCTGCTACAATGATATAATGTGTCTATATTTGAACACTGGCCAGGCCGATAAAGTTCCAAATGTACTGTCTGAAATGAAGGAGAATGGTGTTCTTCCTGACAATTTTAGCTATAGAATTTGTATCAGTTCTTATGGAGCTAGGTCTGATGTAATCAGTATGGAAAACGTTTTGAAAGAAATGGAGAGTCAAACTCACATATCCATGGATTGGATTACTTATTCAATGGTCGCCGGTTTTTTCATAAAAGTTGTTATGCATGACAAAGCAAGGAATTATCTTCGGAAATGTGAGGACAGGGTTGATCAAGACGCACTTGGCTTCAATCATCTCATTTCACACTACACCAATCTGGGACATAAGAATGAAGTAATGAGATTGTGGGCTCTTCAGAAGAAGGCTAAAAAGCAACTCAATAGAGATTATATAACCATGTTGGGTTCTTTGGTAAAGCTGGACTTGCTGGAGGAAGCTGAGAATCTGGTCATGGAATGGGAGTCATCTTGCCAATGTTATGATTTTCGAGTACCGAATGTCGTCCTTATTGGGTATTCGCAAAATGGTTTAATTGAGAAAGCTGAAAAGATGCTTCGAAACATCATCGTAAATGGGATGATCCCATCACCAAATAGTTGGGGCATTATTGCATCTGGGTACTTGGAAAAGCAGAACCTAGAGAAAGCTTTTGAGTGCATGAAAGAAGCGCTTGCTGTGAAAGGGCAAAATAAAGTTTGGAGGCCCAAACCTAATGTTTATCAAGCATCCTGAGATGGCTATCTGAAAATAGAAGATATGAAGAGATGAAAGAGTTTATGAGTTCATTGAAGACTGTACCTTCCATGGATGAAAAACTAAATAGTGCCTTGGATGAGCTTTTAGAAATCATGGAAAATGACGATGGACGAAGGTTGAATTAGAGGTGAAGTGATTTATAATTCTCATATTAAATCACAACGTTG

mRNA sequence

GAAAAGCCCAGGCCATGGCCGCGGCGTCGGCAATGTTCAAAATCTTGAGCAGGTCTTCTTCAGGTTGCACGAGAACACCAAGACCCGAAACAGATGCATTCTGTTTTGTGGCGTTGAGATTATACAGTACGAGACGAAGCTGCAATAGAAGAAAACTCTATGCGATGATTAGTCCTCTCGGTGACCCTGACAGTAGTGTAGTTCCGGTTCTTAATCATGGATTAAGGAAGGCAGGAAGATCAAGGACTTTGAGCTCCGAAGAATCGTTCGTGACCTTCGTACTTGCCGGCGGTATCGCCAAGCCCTTGAGGTGTCTGAATGGATGTGTAGCAAGGGACGTTTTTCCCTCACAACAAGAGACTTTGCCATCCAGCTCGATCTGATTGGCCAAGTTCGGGGGTTGGATTCTGCAGAGAAGTATTTTGGGAGTGTCTCCAAACAAAAGGAAATTGGTAAACTCTATGGTGCTCTTCTAAATTGTTATGTCAGGGAAGGCCTTATAGATAAGTCCCTTGCCCATATGCAGAAGATGAAGGAGATGGGTTTTGCTTCCTCTCCCCTCTGCTACAATGATATAATGTGTCTATATTTGAACACTGGCCAGGCCGATAAAGTTCCAAATGTACTGTCTGAAATGAAGGAGAATGGTGTTCTTCCTGACAATTTTAGCTATAGAATTTGTATCAGTTCTTATGGAGCTAGGTCTGATGTAATCAGTATGGAAAACGTTTTGAAAGAAATGGAGAGTCAAACTCACATATCCATGGATTGGATTACTTATTCAATGGTCGCCGGTTTTTTCATAAAAGTTGTTATGCATGACAAAGCAAGGAATTATCTTCGGAAATGTGAGGACAGGGTTGATCAAGACGCACTTGGCTTCAATCATCTCATTTCACACTACACCAATCTGGGACATAAGAATGAAGTAATGAGATTGTGGGCTCTTCAGAAGAAGGCTAAAAAGCAACTCAATAGAGATTATATAACCATGTTGGGTTCTTTGGTAAAGCTGGACTTGCTGGAGGAAGCTGAGAATCTGGTCATGGAATGGGAGTCATCTTGCCAATGTTATGATTTTCGAGTACCGAATGTCGTCCTTATTGGGTATTCGCAAAATGGTTTAATTGAGAAAGCTGAAAAGATGCTTCGAAACATCATCGTAAATGGGATGATCCCATCACCAAATAGTTGGGGCATTATTGCATCTGGGTACTTGGAAAAGCAGAACCTAGAGAAAGCTTTTGAGTGCATGAAAGAAGCGCTTGCTGTGAAAGGGCAAAATAAAGTTTGGAGGCCCAAACCTAATGTTTATCAAGCATCCTGAGATGGCTATCTGAAAATAGAAGATATGAAGAGATGAAAGAGTTTATGAGTTCATTGAAGACTGTACCTTCCATGGATGAAAAACTAAATAGTGCCTTGGATGAGCTTTTAGAAATCATGGAAAATGACGATGGACGAAGGTTGAATTAGAGGTGAAGTGATTTATAATTCTCATATTAAATCACAACGTTG

Coding sequence (CDS)

ATGTGTAGCAAGGGACGTTTTTCCCTCACAACAAGAGACTTTGCCATCCAGCTCGATCTGATTGGCCAAGTTCGGGGGTTGGATTCTGCAGAGAAGTATTTTGGGAGTGTCTCCAAACAAAAGGAAATTGGTAAACTCTATGGTGCTCTTCTAAATTGTTATGTCAGGGAAGGCCTTATAGATAAGTCCCTTGCCCATATGCAGAAGATGAAGGAGATGGGTTTTGCTTCCTCTCCCCTCTGCTACAATGATATAATGTGTCTATATTTGAACACTGGCCAGGCCGATAAAGTTCCAAATGTACTGTCTGAAATGAAGGAGAATGGTGTTCTTCCTGACAATTTTAGCTATAGAATTTGTATCAGTTCTTATGGAGCTAGGTCTGATGTAATCAGTATGGAAAACGTTTTGAAAGAAATGGAGAGTCAAACTCACATATCCATGGATTGGATTACTTATTCAATGGTCGCCGGTTTTTTCATAAAAGTTGTTATGCATGACAAAGCAAGGAATTATCTTCGGAAATGTGAGGACAGGGTTGATCAAGACGCACTTGGCTTCAATCATCTCATTTCACACTACACCAATCTGGGACATAAGAATGAAGTAATGAGATTGTGGGCTCTTCAGAAGAAGGCTAAAAAGCAACTCAATAGAGATTATATAACCATGTTGGGTTCTTTGGTAAAGCTGGACTTGCTGGAGGAAGCTGAGAATCTGGTCATGGAATGGGAGTCATCTTGCCAATGTTATGATTTTCGAGTACCGAATGTCGTCCTTATTGGGTATTCGCAAAATGGTTTAATTGAGAAAGCTGAAAAGATGCTTCGAAACATCATCGTAAATGGGATGATCCCATCACCAAATAGTTGGGGCATTATTGCATCTGGGTACTTGGAAAAGCAGAACCTAGAGAAAGCTTTTGAGTGCATGAAAGAAGCGCTTGCTGTGAAAGGGCAAAATAAAGTTTGGAGGCCCAAACCTAATGTTTATCAAGCATCCTGA

Protein sequence

MCSKGRFSLTTRDFAIQLDLIGQVRGLDSAEKYFGSVSKQKEIGKLYGALLNCYVREGLIDKSLAHMQKMKEMGFASSPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICISSYGARSDVISMENVLKEMESQTHISMDWITYSMVAGFFIKVVMHDKARNYLRKCEDRVDQDALGFNHLISHYTNLGHKNEVMRLWALQKKAKKQLNRDYITMLGSLVKLDLLEEAENLVMEWESSCQCYDFRVPNVVLIGYSQNGLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLEKQNLEKAFECMKEALAVKGQNKVWRPKPNVYQAS

Homology

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BLAST of IVF0012667 vs. ExPASy Swiss-Prot
Match: Q84JR3 (Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g21705 PE=2 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 3.2e-88
Identity = 160/316 (50.63%), Postives = 221/316 (69.94%), Query Frame = 0


Query: 13  DFAIQLDLIGQVRGLDSAEKYFGSVSKQKEIGKLYGALLNCYVREGLIDKSLAHMQKMKE 72
           + A+ LDLIG+V G  +AE+YF ++ +Q +  K YGALLNCYVR+  ++KSL H +KMKE
Sbjct: 95  EHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGALLNCYVRQQNVEKSLLHFEKMKE 154

Query: 73  MGFASSPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICISSYGARSDVIS 132
           MGF +S L YN+IMCLY N GQ +KVP VL EMKE  V PDN+SYRICI+++GA  D+  
Sbjct: 155 MGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAPDNYSYRICINAFGAMYDLER 214

Query: 133 MENVLKEMESQTHISMDWITYSMVAGFFIKVVMHDKARNYLRKCEDRVD-QDALGFNHLI 192
           +   L++ME +  I+MDW TY++ A F+I     D+A   L+  E+R++ +D  G+NHLI
Sbjct: 215 IGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRAVELLKMSENRLEKKDGEGYNHLI 274

Query: 193 SHYTNLGHKNEVMRLWALQKK-AKKQLNRDYITMLGSLVKLDLLEEAENLVMEWESSCQC 252
           + Y  LG K EV+RLW L+K   K+++N+DY+T+L SLVK+D L EAE ++ EW+SS  C
Sbjct: 275 TLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQSLVKIDALVEAEEVLTEWKSSGNC 334

Query: 253 YDFRVPNVVLIGYSQNGLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLEKQNLEKAFEC 312
           YDFRVPN V+ GY    + EKAE ML ++   G   +P SW ++A+ Y EK  LE AF+C
Sbjct: 335 YDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTPESWELVATAYAEKGTLENAFKC 394

Query: 313 MKEALAVKGQNKVWRP 327
           MK AL V+  ++ WRP
Sbjct: 395 MKTALGVEVGSRKWRP 410

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BLAST of IVF0012667 vs. ExPASy Swiss-Prot
Match: O22714 (Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX=3702 GN=At1g60770 PE=1 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 2.5e-56
Identity = 111/327 (33.94%), Postives = 182/327 (55.66%), Query Frame = 0


Query: 10  TTRDFAIQLDLIGQVRGLDSAEKYFGSVSKQKEIGKLYGALLNCYVREGLIDKSLAHMQK 69
           T  D AI LDL+ + R + + E YF  + +  +    YG+LLNCY +E L +K+   + K
Sbjct: 89  TVSDQAIHLDLVAKAREITAGENYFVDLPETSKTELTYGSLLNCYCKELLTEKAEGLLNK 148

Query: 70  MKEMGFASSPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICISSYGARSD 129
           MKE+    S + YN +M LY  TG+ +KVP ++ E+K   V+PD+++Y + + +  A +D
Sbjct: 149 MKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRALAATND 208

Query: 130 VISMENVLKEMESQTHISMDWITYSMVAGFFIKVVMHDKARNYLRKCE-DRVDQDALGFN 189
           +  +E V++EM     ++ DW TYS +A  ++   +  KA   L++ E     +D   + 
Sbjct: 209 ISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQRDFTAYQ 268

Query: 190 HLISHYTNLGHKNEVMRLW-ALQKKAKKQLNRDYITMLGSLVKLDLLEEAENLVMEWESS 249
            LI+ Y  LG   EV R+W +L+    K  N  Y+ M+  LVKL+ L  AE L  EW+++
Sbjct: 269 FLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQAN 328

Query: 250 CQCYDFRVPNVVLIGYSQNGLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLEKQNLEKA 309
           C  YD R+ NV++  Y+Q GLI+KA ++       G   +  +W I    Y++  ++ +A
Sbjct: 329 CSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYYVKSGDMARA 388

Query: 310 FECMKEALAV-KGQNKVWRPKPNVYQA 334
            ECM +A+++ KG    W P P   +A
Sbjct: 389 LECMSKAVSIGKGDGGKWLPSPETVRA 415

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BLAST of IVF0012667 vs. ExPASy Swiss-Prot
Match: Q8LPS6 (Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX=3702 GN=At1g02150 PE=2 SV=2)

HSP 1 Score: 218.8 bits (556), Expect = 9.4e-56
Identity = 117/324 (36.11%), Postives = 197/324 (60.80%), Query Frame = 0


Query: 6   RFSLTTRDFAIQLDLIGQVRGLDSAEKYFGSVSKQKEIGKLYGALLNCYVREGLIDKSLA 65
           RF L+  D AIQLDLIG+VRG+  AE++F  + +  +  ++YG+LLN YVR    +K+ A
Sbjct: 131 RFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKAEA 190

Query: 66  HMQKMKEMGFASSPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICISSYG 125
            +  M++ G+A  PL +N +M LY+N  + DKV  ++ EMK+  +  D +SY I +SS G
Sbjct: 191 LLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSCG 250

Query: 126 ARSDVISMENVLKEMESQTHISMDWITYSMVAGFFIKVVMHDKARNYLRKCEDRV-DQDA 185
           +   V  ME V ++M+S   I  +W T+S +A  +IK+   +KA + LRK E R+  ++ 
Sbjct: 251 SLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGRNR 310

Query: 186 LGFNHLISHYTNLGHKNEVMRLWALQKKAKKQL-NRDYITMLGSLVKLDLLEEAENLVME 245
           + +++L+S Y +LG+K E+ R+W + K     + N  Y  ++ SLV++  +E AE +  E
Sbjct: 311 IPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEE 370

Query: 246 WESSCQCYDFRVPNVVLIGYSQNGLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLEKQN 305
           W      YD R+PN+++  Y +N  +E AE +  +++  G  PS ++W I+A G+  K+ 
Sbjct: 371 WLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRKRC 430

Query: 306 LEKAFECMKEALAVKGQNKVWRPK 328
           + +A  C++ A + +G +  WRPK
Sbjct: 431 ISEALTCLRNAFSAEGSSN-WRPK 453

[Close]

BLAST of IVF0012667 vs. ExPASy Swiss-Prot
Match: Q9SKU6 (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g20710 PE=2 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 6.1e-55
Identity = 115/316 (36.39%), Postives = 180/316 (56.96%), Query Frame = 0


Query: 13  DFAIQLDLIGQVRGLDSAEKYFGSVSKQKEIGKLYGALLNCYVREGLIDKSLAHMQKMKE 72
           D AI+LDLI +V GL  AEK+F ++  ++    LYGALLNCY  + ++ K+    Q+MKE
Sbjct: 108 DVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKAEQVFQEMKE 167

Query: 73  MGFASSPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICISSYGARSDVIS 132
           +GF    L YN ++ LY+ TG+   V  +L EM++  V PD F+    + +Y   SDV  
Sbjct: 168 LGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAYSVVSDVEG 227

Query: 133 MENVLKEMESQTHISMDWITYSMVAGFFIKVVMHDKARNYLRKCEDRVDQDAL--GFNHL 192
           ME  L   E+   + +DW TY+  A  +IK  + +KA   LRK E  V+       +  L
Sbjct: 228 MEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQKRKHAYEVL 287

Query: 193 ISHYTNLGHKNEVMRLWALQKKAKKQLNRDYITMLGSLVKLDLLEEAENLVMEWESSCQC 252
           +S Y   G K EV RLW+L K+     N  YI+++ +L+K+D +EE E ++ EWE+    
Sbjct: 288 MSFYGAAGKKEEVYRLWSLYKELDGFYNTGYISVISALLKMDDIEEVEKIMEEWEAGHSL 347

Query: 253 YDFRVPNVVLIGYSQNGLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLEKQNLEKAFEC 312
           +D R+P++++ GY + G++EKAE+++  ++    +   ++W  +A GY     +EKA E 
Sbjct: 348 FDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYKMAGKMEKAVEK 407

Query: 313 MKEALAVKGQNKVWRP 327
            K A+ V      WRP
Sbjct: 408 WKRAIEVSKPG--WRP 421

[Close]

BLAST of IVF0012667 vs. ExPASy Swiss-Prot
Match: Q9SY07 (Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g02820 PE=2 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 6.1e-47
Identity = 107/310 (34.52%), Postives = 180/310 (58.06%), Query Frame = 0


Query: 9   LTTRDFAIQLDLIGQVRGLDSAEKYFGSVSKQKEIGKLYGALLNCYVREGLIDKSLAHMQ 68
           L   D+A+ LDLI ++RGL+SAEK+F  +  Q        +LL+ YV+  L DK+ A  +
Sbjct: 127 LQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALFE 186

Query: 69  KMKEMGFASSPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICISSYGARS 128
           KM E GF  S L YN ++ +Y++ GQ +KVP ++ E+K     PD  +Y + ++++ + +
Sbjct: 187 KMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIR-TSPDIVTYNLWLTAFASGN 246

Query: 129 DVISMENV-LKEMESQTHISMDWITYSMVAGFFIKVVMHDKARNYLRKCEDRVD-QDALG 188
           DV   E V LK  E +  ++ DW+TYS++   + K    +KAR  L++ E  V  ++ + 
Sbjct: 247 DVEGAEKVYLKAKEEK--LNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVSKKNRVA 306

Query: 189 FNHLISHYTNLGHKNEVMRLWALQKKAKKQLN-RDYITMLGSLVKLDLLEEAENLVMEWE 248
           +  LIS + NLG K+ V   W   K + K++N  +Y++M+ ++VKL   E+A+ L  EWE
Sbjct: 307 YASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWE 366

Query: 249 SSCQCYDFRVPNVVLIGYSQNGLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLEKQNLE 308
           S     D R+PN++L  Y     +   EK    I+  G+ PS ++W I+   YL+++++E
Sbjct: 367 SVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDME 426

Query: 309 KAFECMKEAL 316
           K  +C  +A+
Sbjct: 427 KVLDCFGKAI 433

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BLAST of IVF0012667 vs. ExPASy TrEMBL
Match: A0A5A7V4J2 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00120 PE=4 SV=1)

HSP 1 Score: 676.0 bits (1743), Expect = 8.0e-191
Identity = 330/330 (100.00%), Postives = 330/330 (100.00%), Query Frame = 0


Query: 1   MCSKGRFSLTTRDFAIQLDLIGQVRGLDSAEKYFGSVSKQKEIGKLYGALLNCYVREGLI 60
           MCSKGRFSLTTRDFAIQLDLIGQVRGLDSAEKYFGSVSKQKEIGKLYGALLNCYVREGLI
Sbjct: 98  MCSKGRFSLTTRDFAIQLDLIGQVRGLDSAEKYFGSVSKQKEIGKLYGALLNCYVREGLI 157

Query: 61  DKSLAHMQKMKEMGFASSPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRIC 120
           DKSLAHMQKMKEMGFASSPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRIC
Sbjct: 158 DKSLAHMQKMKEMGFASSPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRIC 217

Query: 121 ISSYGARSDVISMENVLKEMESQTHISMDWITYSMVAGFFIKVVMHDKARNYLRKCEDRV 180
           ISSYGARSDVISMENVLKEMESQTHISMDWITYSMVAGFFIKVVMHDKARNYLRKCEDRV
Sbjct: 218 ISSYGARSDVISMENVLKEMESQTHISMDWITYSMVAGFFIKVVMHDKARNYLRKCEDRV 277

Query: 181 DQDALGFNHLISHYTNLGHKNEVMRLWALQKKAKKQLNRDYITMLGSLVKLDLLEEAENL 240
           DQDALGFNHLISHYTNLGHKNEVMRLWALQKKAKKQLNRDYITMLGSLVKLDLLEEAENL
Sbjct: 278 DQDALGFNHLISHYTNLGHKNEVMRLWALQKKAKKQLNRDYITMLGSLVKLDLLEEAENL 337

Query: 241 VMEWESSCQCYDFRVPNVVLIGYSQNGLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLE 300
           VMEWESSCQCYDFRVPNVVLIGYSQNGLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLE
Sbjct: 338 VMEWESSCQCYDFRVPNVVLIGYSQNGLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLE 397

Query: 301 KQNLEKAFECMKEALAVKGQNKVWRPKPNV 331
           KQNLEKAFECMKEALAVKGQNKVWRPKPNV
Sbjct: 398 KQNLEKAFECMKEALAVKGQNKVWRPKPNV 427

[Close]

BLAST of IVF0012667 vs. ExPASy TrEMBL
Match: A0A1S4DZ16 (pentatricopeptide repeat-containing protein At4g21705, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103493335 PE=4 SV=1)

HSP 1 Score: 671.4 bits (1731), Expect = 2.0e-189
Identity = 328/330 (99.39%), Postives = 329/330 (99.70%), Query Frame = 0


Query: 1   MCSKGRFSLTTRDFAIQLDLIGQVRGLDSAEKYFGSVSKQKEIGKLYGALLNCYVREGLI 60
           MCSKGRFSLTTRDFAIQLDLIGQVRGLDSAEKYFGSVSKQKEIGKLYG+LLNCYVREGLI
Sbjct: 104 MCSKGRFSLTTRDFAIQLDLIGQVRGLDSAEKYFGSVSKQKEIGKLYGSLLNCYVREGLI 163

Query: 61  DKSLAHMQKMKEMGFASSPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRIC 120
           DKSLAHMQKMKEMGFASSPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRIC
Sbjct: 164 DKSLAHMQKMKEMGFASSPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRIC 223

Query: 121 ISSYGARSDVISMENVLKEMESQTHISMDWITYSMVAGFFIKVVMHDKARNYLRKCEDRV 180
           ISSYGARSDVISMENVLKEMESQTHISMDWITYSMVAGFFIKVVMHDKARNYLRKCEDRV
Sbjct: 224 ISSYGARSDVISMENVLKEMESQTHISMDWITYSMVAGFFIKVVMHDKARNYLRKCEDRV 283

Query: 181 DQDALGFNHLISHYTNLGHKNEVMRLWALQKKAKKQLNRDYITMLGSLVKLDLLEEAENL 240
           DQDALGFNHLISHYTNLGHKNEVMRLWALQKKAKKQLNRDYITMLGSLVKLDLLEEAENL
Sbjct: 284 DQDALGFNHLISHYTNLGHKNEVMRLWALQKKAKKQLNRDYITMLGSLVKLDLLEEAENL 343

Query: 241 VMEWESSCQCYDFRVPNVVLIGYSQNGLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLE 300
           VMEWESSCQC DFRVPNVVLIGYSQNGLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLE
Sbjct: 344 VMEWESSCQCNDFRVPNVVLIGYSQNGLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLE 403

Query: 301 KQNLEKAFECMKEALAVKGQNKVWRPKPNV 331
           KQNLEKAFECMKEALAVKGQNKVWRPKPNV
Sbjct: 404 KQNLEKAFECMKEALAVKGQNKVWRPKPNV 433

[Close]

BLAST of IVF0012667 vs. ExPASy TrEMBL
Match: A0A0A0L7Y2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G104890 PE=4 SV=1)

HSP 1 Score: 648.7 bits (1672), Expect = 1.4e-182
Identity = 316/330 (95.76%), Postives = 319/330 (96.67%), Query Frame = 0


Query: 1   MCSKGRFSLTTRDFAIQLDLIGQVRGLDSAEKYFGSVSKQKEIGKLYGALLNCYVREGLI 60
           MCSKG FSLTTRDFAIQLDLIGQVRGLDSAEKYFGSVS QKEIGKLYGALLNCYVREGLI
Sbjct: 104 MCSKGLFSLTTRDFAIQLDLIGQVRGLDSAEKYFGSVSNQKEIGKLYGALLNCYVREGLI 163

Query: 61  DKSLAHMQKMKEMGFASSPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRIC 120
           DKSLAHMQKMKEMG ASSPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRIC
Sbjct: 164 DKSLAHMQKMKEMGLASSPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRIC 223

Query: 121 ISSYGARSDVISMENVLKEMESQTHISMDWITYSMVAGFFIKVVMHDKARNYLRKCEDRV 180
           ISSYGARSDVISMENVLKEME QTHISMDW TYSMVAGFFIK  MHDKA NYLRKCED+V
Sbjct: 224 ISSYGARSDVISMENVLKEMEGQTHISMDWTTYSMVAGFFIKAGMHDKAMNYLRKCEDKV 283

Query: 181 DQDALGFNHLISHYTNLGHKNEVMRLWALQKKAKKQLNRDYITMLGSLVKLDLLEEAENL 240
           D+DALGFNHLISHYTNLGHKNEVMRLWAL KK KKQLNRDYITMLGSLVKL+LLEEAENL
Sbjct: 284 DEDALGFNHLISHYTNLGHKNEVMRLWALLKKGKKQLNRDYITMLGSLVKLELLEEAENL 343

Query: 241 VMEWESSCQCYDFRVPNVVLIGYSQNGLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLE 300
           VMEWESSCQCYDFRVPNVVLIGYSQ GLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLE
Sbjct: 344 VMEWESSCQCYDFRVPNVVLIGYSQKGLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLE 403

Query: 301 KQNLEKAFECMKEALAVKGQNKVWRPKPNV 331
           KQNLEKAFECMKEALAVKGQNKVWRPKPNV
Sbjct: 404 KQNLEKAFECMKEALAVKGQNKVWRPKPNV 433

[Close]

BLAST of IVF0012667 vs. ExPASy TrEMBL
Match: A0A6J1FVG8 (pentatricopeptide repeat-containing protein At4g21705, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111447235 PE=4 SV=1)

HSP 1 Score: 568.5 bits (1464), Expect = 1.8e-158
Identity = 272/330 (82.42%), Postives = 302/330 (91.52%), Query Frame = 0


Query: 1   MCSKGRFSLTTRDFAIQLDLIGQVRGLDSAEKYFGSVSKQKEIGKLYGALLNCYVREGLI 60
           M SKG FS TTRDFA+QLDLIG+VRG+DSAEKYF SVS Q+EIGKLYGALLNCYVREGL+
Sbjct: 152 MRSKGLFSFTTRDFAVQLDLIGRVRGIDSAEKYFSSVSNQEEIGKLYGALLNCYVREGLV 211

Query: 61  DKSLAHMQKMKEMGFASSPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRIC 120
           DK+L+HMQKMKEMGFASSPLCYNDIMCLYLNTGQ DKVPNVLSEMK+NGVLPDN+SYRIC
Sbjct: 212 DKALSHMQKMKEMGFASSPLCYNDIMCLYLNTGQVDKVPNVLSEMKDNGVLPDNYSYRIC 271

Query: 121 ISSYGARSDVISMENVLKEMESQTHISMDWITYSMVAGFFIKVVMHDKARNYLRKCEDRV 180
           ISSYGARSD+I M  VLKEMESQTHISMDW TYSMVA FFIK  MH++A +YLRKCED+V
Sbjct: 272 ISSYGARSDLIGMLKVLKEMESQTHISMDWTTYSMVANFFIKAGMHEQAMSYLRKCEDKV 331

Query: 181 DQDALGFNHLISHYTNLGHKNEVMRLWALQKKAKKQLNRDYITMLGSLVKLDLLEEAENL 240
           +QDALGFNHLIS YT+LG K+EVMRLWALQKK KKQ+NRDYITMLG LVKL+ LEEAE L
Sbjct: 332 NQDALGFNHLISLYTSLGRKDEVMRLWALQKKCKKQVNRDYITMLGCLVKLEFLEEAEKL 391

Query: 241 VMEWESSCQCYDFRVPNVVLIGYSQNGLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLE 300
           V EWESSC+CYDFRVPNV+LIGYSQ GLIE+AEKML+NII +G IP PNSWGIIA+GYLE
Sbjct: 392 VEEWESSCECYDFRVPNVLLIGYSQRGLIERAEKMLQNIISDGRIPPPNSWGIIAAGYLE 451

Query: 301 KQNLEKAFECMKEALAVKGQNKVWRPKPNV 331
           KQN E+AF+CMKEA+AV+ QNK WRPKP+V
Sbjct: 452 KQNPERAFKCMKEAVAVQEQNKGWRPKPSV 481

[Close]

BLAST of IVF0012667 vs. ExPASy TrEMBL
Match: A0A6J1JQ72 (pentatricopeptide repeat-containing protein At4g21705, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111486809 PE=4 SV=1)

HSP 1 Score: 568.2 bits (1463), Expect = 2.3e-158
Identity = 273/330 (82.73%), Postives = 302/330 (91.52%), Query Frame = 0


Query: 1   MCSKGRFSLTTRDFAIQLDLIGQVRGLDSAEKYFGSVSKQKEIGKLYGALLNCYVREGLI 60
           M SKG FS TTRDFA+QLDLIG+V+GLDSAEKYF SVS Q+E+GKLYGALLNCYVREGL+
Sbjct: 148 MRSKGLFSFTTRDFAVQLDLIGRVQGLDSAEKYFSSVSNQEEMGKLYGALLNCYVREGLV 207

Query: 61  DKSLAHMQKMKEMGFASSPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRIC 120
           DK+L+HMQKMKEMGFASSPLCYNDIMCLYLNTGQ DKVPNVLSEMKENGVLPDN+SYRIC
Sbjct: 208 DKALSHMQKMKEMGFASSPLCYNDIMCLYLNTGQVDKVPNVLSEMKENGVLPDNYSYRIC 267

Query: 121 ISSYGARSDVISMENVLKEMESQTHISMDWITYSMVAGFFIKVVMHDKARNYLRKCEDRV 180
           ISSYGARSD+I M  VLKEMESQTHISMDW TYSMVA FFIK  MH+KA +YLRKCED+V
Sbjct: 268 ISSYGARSDLIGMLKVLKEMESQTHISMDWTTYSMVANFFIKAGMHEKAMSYLRKCEDKV 327

Query: 181 DQDALGFNHLISHYTNLGHKNEVMRLWALQKKAKKQLNRDYITMLGSLVKLDLLEEAENL 240
           +QDALGFNHLIS YT+LG K+EVMRLWALQKK KKQ+NRDYITMLG LVKL+ LEEAE L
Sbjct: 328 NQDALGFNHLISLYTSLGCKDEVMRLWALQKKCKKQVNRDYITMLGCLVKLEFLEEAEKL 387

Query: 241 VMEWESSCQCYDFRVPNVVLIGYSQNGLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLE 300
           V EW SSC+CYDFRVPNV+LIGYS+ GLIE+AEKML+NII +G IP PNSWGIIA+GYLE
Sbjct: 388 VKEWVSSCECYDFRVPNVLLIGYSKRGLIERAEKMLQNIISDGRIPPPNSWGIIAAGYLE 447

Query: 301 KQNLEKAFECMKEALAVKGQNKVWRPKPNV 331
           KQNLEKAF+CMKEA+AV+ QNK WRPKP+V
Sbjct: 448 KQNLEKAFKCMKEAVAVQEQNKGWRPKPSV 477

[Close]

BLAST of IVF0012667 vs. NCBI nr
Match: KAA0060651.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK02223.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 670 bits (1728), Expect = 1.81e-240
Identity = 330/330 (100.00%), Postives = 330/330 (100.00%), Query Frame = 0


Query: 1   MCSKGRFSLTTRDFAIQLDLIGQVRGLDSAEKYFGSVSKQKEIGKLYGALLNCYVREGLI 60
           MCSKGRFSLTTRDFAIQLDLIGQVRGLDSAEKYFGSVSKQKEIGKLYGALLNCYVREGLI
Sbjct: 98  MCSKGRFSLTTRDFAIQLDLIGQVRGLDSAEKYFGSVSKQKEIGKLYGALLNCYVREGLI 157

Query: 61  DKSLAHMQKMKEMGFASSPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRIC 120
           DKSLAHMQKMKEMGFASSPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRIC
Sbjct: 158 DKSLAHMQKMKEMGFASSPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRIC 217

Query: 121 ISSYGARSDVISMENVLKEMESQTHISMDWITYSMVAGFFIKVVMHDKARNYLRKCEDRV 180
           ISSYGARSDVISMENVLKEMESQTHISMDWITYSMVAGFFIKVVMHDKARNYLRKCEDRV
Sbjct: 218 ISSYGARSDVISMENVLKEMESQTHISMDWITYSMVAGFFIKVVMHDKARNYLRKCEDRV 277

Query: 181 DQDALGFNHLISHYTNLGHKNEVMRLWALQKKAKKQLNRDYITMLGSLVKLDLLEEAENL 240
           DQDALGFNHLISHYTNLGHKNEVMRLWALQKKAKKQLNRDYITMLGSLVKLDLLEEAENL
Sbjct: 278 DQDALGFNHLISHYTNLGHKNEVMRLWALQKKAKKQLNRDYITMLGSLVKLDLLEEAENL 337

Query: 241 VMEWESSCQCYDFRVPNVVLIGYSQNGLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLE 300
           VMEWESSCQCYDFRVPNVVLIGYSQNGLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLE
Sbjct: 338 VMEWESSCQCYDFRVPNVVLIGYSQNGLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLE 397

Query: 301 KQNLEKAFECMKEALAVKGQNKVWRPKPNV 330
           KQNLEKAFECMKEALAVKGQNKVWRPKPNV
Sbjct: 398 KQNLEKAFECMKEALAVKGQNKVWRPKPNV 427

[Close]

BLAST of IVF0012667 vs. NCBI nr
Match: XP_008452263.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g21705, mitochondrial-like [Cucumis melo] >XP_016901217.1 PREDICTED: pentatricopeptide repeat-containing protein At4g21705, mitochondrial-like [Cucumis melo])

HSP 1 Score: 665 bits (1716), Expect = 1.51e-238
Identity = 328/330 (99.39%), Postives = 329/330 (99.70%), Query Frame = 0


Query: 1   MCSKGRFSLTTRDFAIQLDLIGQVRGLDSAEKYFGSVSKQKEIGKLYGALLNCYVREGLI 60
           MCSKGRFSLTTRDFAIQLDLIGQVRGLDSAEKYFGSVSKQKEIGKLYG+LLNCYVREGLI
Sbjct: 104 MCSKGRFSLTTRDFAIQLDLIGQVRGLDSAEKYFGSVSKQKEIGKLYGSLLNCYVREGLI 163

Query: 61  DKSLAHMQKMKEMGFASSPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRIC 120
           DKSLAHMQKMKEMGFASSPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRIC
Sbjct: 164 DKSLAHMQKMKEMGFASSPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRIC 223

Query: 121 ISSYGARSDVISMENVLKEMESQTHISMDWITYSMVAGFFIKVVMHDKARNYLRKCEDRV 180
           ISSYGARSDVISMENVLKEMESQTHISMDWITYSMVAGFFIKVVMHDKARNYLRKCEDRV
Sbjct: 224 ISSYGARSDVISMENVLKEMESQTHISMDWITYSMVAGFFIKVVMHDKARNYLRKCEDRV 283

Query: 181 DQDALGFNHLISHYTNLGHKNEVMRLWALQKKAKKQLNRDYITMLGSLVKLDLLEEAENL 240
           DQDALGFNHLISHYTNLGHKNEVMRLWALQKKAKKQLNRDYITMLGSLVKLDLLEEAENL
Sbjct: 284 DQDALGFNHLISHYTNLGHKNEVMRLWALQKKAKKQLNRDYITMLGSLVKLDLLEEAENL 343

Query: 241 VMEWESSCQCYDFRVPNVVLIGYSQNGLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLE 300
           VMEWESSCQC DFRVPNVVLIGYSQNGLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLE
Sbjct: 344 VMEWESSCQCNDFRVPNVVLIGYSQNGLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLE 403

Query: 301 KQNLEKAFECMKEALAVKGQNKVWRPKPNV 330
           KQNLEKAFECMKEALAVKGQNKVWRPKPNV
Sbjct: 404 KQNLEKAFECMKEALAVKGQNKVWRPKPNV 433

[Close]

BLAST of IVF0012667 vs. NCBI nr
Match: KAE8650177.1 (hypothetical protein Csa_011341 [Cucumis sativus])

HSP 1 Score: 642 bits (1657), Expect = 1.67e-229
Identity = 316/330 (95.76%), Postives = 319/330 (96.67%), Query Frame = 0


Query: 1   MCSKGRFSLTTRDFAIQLDLIGQVRGLDSAEKYFGSVSKQKEIGKLYGALLNCYVREGLI 60
           MCSKG FSLTTRDFAIQLDLIGQVRGLDSAEKYFGSVS QKEIGKLYGALLNCYVREGLI
Sbjct: 104 MCSKGLFSLTTRDFAIQLDLIGQVRGLDSAEKYFGSVSNQKEIGKLYGALLNCYVREGLI 163

Query: 61  DKSLAHMQKMKEMGFASSPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRIC 120
           DKSLAHMQKMKEMG ASSPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRIC
Sbjct: 164 DKSLAHMQKMKEMGLASSPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRIC 223

Query: 121 ISSYGARSDVISMENVLKEMESQTHISMDWITYSMVAGFFIKVVMHDKARNYLRKCEDRV 180
           ISSYGARSDVISMENVLKEME QTHISMDW TYSMVAGFFIK  MHDKA NYLRKCED+V
Sbjct: 224 ISSYGARSDVISMENVLKEMEGQTHISMDWTTYSMVAGFFIKAGMHDKAMNYLRKCEDKV 283

Query: 181 DQDALGFNHLISHYTNLGHKNEVMRLWALQKKAKKQLNRDYITMLGSLVKLDLLEEAENL 240
           D+DALGFNHLISHYTNLGHKNEVMRLWAL KK KKQLNRDYITMLGSLVKL+LLEEAENL
Sbjct: 284 DEDALGFNHLISHYTNLGHKNEVMRLWALLKKGKKQLNRDYITMLGSLVKLELLEEAENL 343

Query: 241 VMEWESSCQCYDFRVPNVVLIGYSQNGLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLE 300
           VMEWESSCQCYDFRVPNVVLIGYSQ GLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLE
Sbjct: 344 VMEWESSCQCYDFRVPNVVLIGYSQKGLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLE 403

Query: 301 KQNLEKAFECMKEALAVKGQNKVWRPKPNV 330
           KQNLEKAFECMKEALAVKGQNKVWRPKPNV
Sbjct: 404 KQNLEKAFECMKEALAVKGQNKVWRPKPNV 433

[Close]

BLAST of IVF0012667 vs. NCBI nr
Match: XP_004133705.1 (pentatricopeptide repeat-containing protein At4g21705, mitochondrial [Cucumis sativus])

HSP 1 Score: 642 bits (1657), Expect = 1.73e-229
Identity = 316/330 (95.76%), Postives = 319/330 (96.67%), Query Frame = 0


Query: 1   MCSKGRFSLTTRDFAIQLDLIGQVRGLDSAEKYFGSVSKQKEIGKLYGALLNCYVREGLI 60
           MCSKG FSLTTRDFAIQLDLIGQVRGLDSAEKYFGSVS QKEIGKLYGALLNCYVREGLI
Sbjct: 104 MCSKGLFSLTTRDFAIQLDLIGQVRGLDSAEKYFGSVSNQKEIGKLYGALLNCYVREGLI 163

Query: 61  DKSLAHMQKMKEMGFASSPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRIC 120
           DKSLAHMQKMKEMG ASSPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRIC
Sbjct: 164 DKSLAHMQKMKEMGLASSPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRIC 223

Query: 121 ISSYGARSDVISMENVLKEMESQTHISMDWITYSMVAGFFIKVVMHDKARNYLRKCEDRV 180
           ISSYGARSDVISMENVLKEME QTHISMDW TYSMVAGFFIK  MHDKA NYLRKCED+V
Sbjct: 224 ISSYGARSDVISMENVLKEMEGQTHISMDWTTYSMVAGFFIKAGMHDKAMNYLRKCEDKV 283

Query: 181 DQDALGFNHLISHYTNLGHKNEVMRLWALQKKAKKQLNRDYITMLGSLVKLDLLEEAENL 240
           D+DALGFNHLISHYTNLGHKNEVMRLWAL KK KKQLNRDYITMLGSLVKL+LLEEAENL
Sbjct: 284 DEDALGFNHLISHYTNLGHKNEVMRLWALLKKGKKQLNRDYITMLGSLVKLELLEEAENL 343

Query: 241 VMEWESSCQCYDFRVPNVVLIGYSQNGLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLE 300
           VMEWESSCQCYDFRVPNVVLIGYSQ GLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLE
Sbjct: 344 VMEWESSCQCYDFRVPNVVLIGYSQKGLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLE 403

Query: 301 KQNLEKAFECMKEALAVKGQNKVWRPKPNV 330
           KQNLEKAFECMKEALAVKGQNKVWRPKPNV
Sbjct: 404 KQNLEKAFECMKEALAVKGQNKVWRPKPNV 433

[Close]

BLAST of IVF0012667 vs. NCBI nr
Match: XP_038903586.1 (pentatricopeptide repeat-containing protein At4g21705, mitochondrial-like isoform X2 [Benincasa hispida])

HSP 1 Score: 583 bits (1502), Expect = 6.87e-206
Identity = 285/330 (86.36%), Postives = 305/330 (92.42%), Query Frame = 0


Query: 1   MCSKGRFSLTTRDFAIQLDLIGQVRGLDSAEKYFGSVSKQKEIGKLYGALLNCYVREGLI 60
           MCSKG FSLTTRDFAIQLDLI +VRGLDSAEKYFGSVS Q+EIGKLYGALLNCYVREGL+
Sbjct: 104 MCSKGLFSLTTRDFAIQLDLISRVRGLDSAEKYFGSVSNQEEIGKLYGALLNCYVREGLV 163

Query: 61  DKSLAHMQKMKEMGFASSPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRIC 120
           DKSLAHMQKMKEMGFASS LCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRIC
Sbjct: 164 DKSLAHMQKMKEMGFASSSLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRIC 223

Query: 121 ISSYGARSDVISMENVLKEMESQTHISMDWITYSMVAGFFIKVVMHDKARNYLRKCEDRV 180
           ISSYGA SDVI+ME VLKEME QTHISMDWITYSMVA FFIK  MH+KA +YLRKCED+V
Sbjct: 224 ISSYGAESDVITMEKVLKEMECQTHISMDWITYSMVANFFIKAGMHEKAMSYLRKCEDKV 283

Query: 181 DQDALGFNHLISHYTNLGHKNEVMRLWALQKKAKKQLNRDYITMLGSLVKLDLLEEAENL 240
           DQDALGFNHLISHYT+LGHK+EV RLWALQKK KK +NRDYITML SL+KL+LLEEAENL
Sbjct: 284 DQDALGFNHLISHYTSLGHKDEVTRLWALQKKCKKPVNRDYITMLSSLLKLELLEEAENL 343

Query: 241 VMEWESSCQCYDFRVPNVVLIGYSQNGLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLE 300
           +MEWESSCQCYDFRVPNV+LI YSQ GLIE+AEK+LRNII +G IPSPNSW IIA+GYLE
Sbjct: 344 LMEWESSCQCYDFRVPNVLLIAYSQKGLIERAEKILRNIIRDGRIPSPNSWAIIAAGYLE 403

Query: 301 KQNLEKAFECMKEALAVKGQNKVWRPKPNV 330
           KQNLEKAF+ MKEALAVK QNK WRPK  +
Sbjct: 404 KQNLEKAFQSMKEALAVKEQNKGWRPKQGI 433

[Close]

BLAST of IVF0012667 vs. TAIR 10
Match: AT4G21705.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 326.6 bits (836), Expect = 2.3e-89
Identity = 160/316 (50.63%), Postives = 221/316 (69.94%), Query Frame = 0


Query: 13  DFAIQLDLIGQVRGLDSAEKYFGSVSKQKEIGKLYGALLNCYVREGLIDKSLAHMQKMKE 72
           + A+ LDLIG+V G  +AE+YF ++ +Q +  K YGALLNCYVR+  ++KSL H +KMKE
Sbjct: 95  EHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGALLNCYVRQQNVEKSLLHFEKMKE 154

Query: 73  MGFASSPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICISSYGARSDVIS 132
           MGF +S L YN+IMCLY N GQ +KVP VL EMKE  V PDN+SYRICI+++GA  D+  
Sbjct: 155 MGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAPDNYSYRICINAFGAMYDLER 214

Query: 133 MENVLKEMESQTHISMDWITYSMVAGFFIKVVMHDKARNYLRKCEDRVD-QDALGFNHLI 192
           +   L++ME +  I+MDW TY++ A F+I     D+A   L+  E+R++ +D  G+NHLI
Sbjct: 215 IGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRAVELLKMSENRLEKKDGEGYNHLI 274

Query: 193 SHYTNLGHKNEVMRLWALQKK-AKKQLNRDYITMLGSLVKLDLLEEAENLVMEWESSCQC 252
           + Y  LG K EV+RLW L+K   K+++N+DY+T+L SLVK+D L EAE ++ EW+SS  C
Sbjct: 275 TLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQSLVKIDALVEAEEVLTEWKSSGNC 334

Query: 253 YDFRVPNVVLIGYSQNGLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLEKQNLEKAFEC 312
           YDFRVPN V+ GY    + EKAE ML ++   G   +P SW ++A+ Y EK  LE AF+C
Sbjct: 335 YDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTPESWELVATAYAEKGTLENAFKC 394

Query: 313 MKEALAVKGQNKVWRP 327
           MK AL V+  ++ WRP
Sbjct: 395 MKTALGVEVGSRKWRP 410

[Close]

BLAST of IVF0012667 vs. TAIR 10
Match: AT1G60770.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 220.7 bits (561), Expect = 1.8e-57
Identity = 111/327 (33.94%), Postives = 182/327 (55.66%), Query Frame = 0


Query: 10  TTRDFAIQLDLIGQVRGLDSAEKYFGSVSKQKEIGKLYGALLNCYVREGLIDKSLAHMQK 69
           T  D AI LDL+ + R + + E YF  + +  +    YG+LLNCY +E L +K+   + K
Sbjct: 89  TVSDQAIHLDLVAKAREITAGENYFVDLPETSKTELTYGSLLNCYCKELLTEKAEGLLNK 148

Query: 70  MKEMGFASSPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICISSYGARSD 129
           MKE+    S + YN +M LY  TG+ +KVP ++ E+K   V+PD+++Y + + +  A +D
Sbjct: 149 MKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRALAATND 208

Query: 130 VISMENVLKEMESQTHISMDWITYSMVAGFFIKVVMHDKARNYLRKCE-DRVDQDALGFN 189
           +  +E V++EM     ++ DW TYS +A  ++   +  KA   L++ E     +D   + 
Sbjct: 209 ISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQRDFTAYQ 268

Query: 190 HLISHYTNLGHKNEVMRLW-ALQKKAKKQLNRDYITMLGSLVKLDLLEEAENLVMEWESS 249
            LI+ Y  LG   EV R+W +L+    K  N  Y+ M+  LVKL+ L  AE L  EW+++
Sbjct: 269 FLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQAN 328

Query: 250 CQCYDFRVPNVVLIGYSQNGLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLEKQNLEKA 309
           C  YD R+ NV++  Y+Q GLI+KA ++       G   +  +W I    Y++  ++ +A
Sbjct: 329 CSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYYVKSGDMARA 388

Query: 310 FECMKEALAV-KGQNKVWRPKPNVYQA 334
            ECM +A+++ KG    W P P   +A
Sbjct: 389 LECMSKAVSIGKGDGGKWLPSPETVRA 415

[Close]

BLAST of IVF0012667 vs. TAIR 10
Match: AT1G02150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 218.8 bits (556), Expect = 6.7e-57
Identity = 117/324 (36.11%), Postives = 197/324 (60.80%), Query Frame = 0


Query: 6   RFSLTTRDFAIQLDLIGQVRGLDSAEKYFGSVSKQKEIGKLYGALLNCYVREGLIDKSLA 65
           RF L+  D AIQLDLIG+VRG+  AE++F  + +  +  ++YG+LLN YVR    +K+ A
Sbjct: 131 RFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKAEA 190

Query: 66  HMQKMKEMGFASSPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICISSYG 125
            +  M++ G+A  PL +N +M LY+N  + DKV  ++ EMK+  +  D +SY I +SS G
Sbjct: 191 LLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSCG 250

Query: 126 ARSDVISMENVLKEMESQTHISMDWITYSMVAGFFIKVVMHDKARNYLRKCEDRV-DQDA 185
           +   V  ME V ++M+S   I  +W T+S +A  +IK+   +KA + LRK E R+  ++ 
Sbjct: 251 SLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGRNR 310

Query: 186 LGFNHLISHYTNLGHKNEVMRLWALQKKAKKQL-NRDYITMLGSLVKLDLLEEAENLVME 245
           + +++L+S Y +LG+K E+ R+W + K     + N  Y  ++ SLV++  +E AE +  E
Sbjct: 311 IPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEE 370

Query: 246 WESSCQCYDFRVPNVVLIGYSQNGLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLEKQN 305
           W      YD R+PN+++  Y +N  +E AE +  +++  G  PS ++W I+A G+  K+ 
Sbjct: 371 WLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRKRC 430

Query: 306 LEKAFECMKEALAVKGQNKVWRPK 328
           + +A  C++ A + +G +  WRPK
Sbjct: 431 ISEALTCLRNAFSAEGSSN-WRPK 453

[Close]

BLAST of IVF0012667 vs. TAIR 10
Match: AT2G20710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 216.1 bits (549), Expect = 4.3e-56
Identity = 115/316 (36.39%), Postives = 180/316 (56.96%), Query Frame = 0


Query: 13  DFAIQLDLIGQVRGLDSAEKYFGSVSKQKEIGKLYGALLNCYVREGLIDKSLAHMQKMKE 72
           D AI+LDLI +V GL  AEK+F ++  ++    LYGALLNCY  + ++ K+    Q+MKE
Sbjct: 108 DVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKAEQVFQEMKE 167

Query: 73  MGFASSPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICISSYGARSDVIS 132
           +GF    L YN ++ LY+ TG+   V  +L EM++  V PD F+    + +Y   SDV  
Sbjct: 168 LGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAYSVVSDVEG 227

Query: 133 MENVLKEMESQTHISMDWITYSMVAGFFIKVVMHDKARNYLRKCEDRVDQDAL--GFNHL 192
           ME  L   E+   + +DW TY+  A  +IK  + +KA   LRK E  V+       +  L
Sbjct: 228 MEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQKRKHAYEVL 287

Query: 193 ISHYTNLGHKNEVMRLWALQKKAKKQLNRDYITMLGSLVKLDLLEEAENLVMEWESSCQC 252
           +S Y   G K EV RLW+L K+     N  YI+++ +L+K+D +EE E ++ EWE+    
Sbjct: 288 MSFYGAAGKKEEVYRLWSLYKELDGFYNTGYISVISALLKMDDIEEVEKIMEEWEAGHSL 347

Query: 253 YDFRVPNVVLIGYSQNGLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLEKQNLEKAFEC 312
           +D R+P++++ GY + G++EKAE+++  ++    +   ++W  +A GY     +EKA E 
Sbjct: 348 FDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYKMAGKMEKAVEK 407

Query: 313 MKEALAVKGQNKVWRP 327
            K A+ V      WRP
Sbjct: 408 WKRAIEVSKPG--WRP 421

[Close]

BLAST of IVF0012667 vs. TAIR 10
Match: AT2G20710.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 216.1 bits (549), Expect = 4.3e-56
Identity = 115/316 (36.39%), Postives = 180/316 (56.96%), Query Frame = 0


Query: 13  DFAIQLDLIGQVRGLDSAEKYFGSVSKQKEIGKLYGALLNCYVREGLIDKSLAHMQKMKE 72
           D AI+LDLI +V GL  AEK+F ++  ++    LYGALLNCY  + ++ K+    Q+MKE
Sbjct: 13  DVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKAEQVFQEMKE 72

Query: 73  MGFASSPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICISSYGARSDVIS 132
           +GF    L YN ++ LY+ TG+   V  +L EM++  V PD F+    + +Y   SDV  
Sbjct: 73  LGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAYSVVSDVEG 132

Query: 133 MENVLKEMESQTHISMDWITYSMVAGFFIKVVMHDKARNYLRKCEDRVDQDAL--GFNHL 192
           ME  L   E+   + +DW TY+  A  +IK  + +KA   LRK E  V+       +  L
Sbjct: 133 MEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQKRKHAYEVL 192

Query: 193 ISHYTNLGHKNEVMRLWALQKKAKKQLNRDYITMLGSLVKLDLLEEAENLVMEWESSCQC 252
           +S Y   G K EV RLW+L K+     N  YI+++ +L+K+D +EE E ++ EWE+    
Sbjct: 193 MSFYGAAGKKEEVYRLWSLYKELDGFYNTGYISVISALLKMDDIEEVEKIMEEWEAGHSL 252

Query: 253 YDFRVPNVVLIGYSQNGLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLEKQNLEKAFEC 312
           +D R+P++++ GY + G++EKAE+++  ++    +   ++W  +A GY     +EKA E 
Sbjct: 253 FDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYKMAGKMEKAVEK 312

Query: 313 MKEALAVKGQNKVWRP 327
            K A+ V      WRP
Sbjct: 313 WKRAIEVSKPG--WRP 326

The following BLAST results are available for this feature:

BLAST of IVF0012667 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84JR3	3.2e-88	50.63	Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidop...	[more]
O22714	2.5e-56	33.94	Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX...	[more]
Q8LPS6	9.4e-56	36.11	Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX...	[more]
Q9SKU6	6.1e-55	36.39	Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidop...	[more]
Q9SY07	6.1e-47	34.52	Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidop...	[more]

BLAST of IVF0012667 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V4J2	8.0e-191	100.00	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S4DZ16	2.0e-189	99.39	pentatricopeptide repeat-containing protein At4g21705, mitochondrial-like OS=Cuc...	[more]
A0A0A0L7Y2	1.4e-182	95.76	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G104890 PE=4 SV=1	[more]
A0A6J1FVG8	1.8e-158	82.42	pentatricopeptide repeat-containing protein At4g21705, mitochondrial-like OS=Cuc...	[more]
A0A6J1JQ72	2.3e-158	82.73	pentatricopeptide repeat-containing protein At4g21705, mitochondrial-like OS=Cuc...	[more]

BLAST of IVF0012667 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0060651.1	1.81e-240	100.00	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK02223...	[more]
XP_008452263.1	1.51e-238	99.39	PREDICTED: pentatricopeptide repeat-containing protein At4g21705, mitochondrial-...	[more]
KAE8650177.1	1.67e-229	95.76	hypothetical protein Csa_011341 [Cucumis sativus]	[more]
XP_004133705.1	1.73e-229	95.76	pentatricopeptide repeat-containing protein At4g21705, mitochondrial [Cucumis sa...	[more]
XP_038903586.1	6.87e-206	86.36	pentatricopeptide repeat-containing protein At4g21705, mitochondrial-like isofor...	[more]

BLAST of IVF0012667 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21705.1	2.3e-89	50.63	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G60770.1	1.8e-57	33.94	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G02150.1	6.7e-57	36.11	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G20710.1	4.3e-56	36.39	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G20710.2	4.3e-56	36.39	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 81..123 e-value: 7.2E-8 score: 32.5
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 46..75 e-value: 0.0012 score: 16.9 coord: 81..113 e-value: 9.7E-5 score: 20.3 coord: 257..287 e-value: 0.0019 score: 16.2
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 221..246 e-value: 1.2 score: 9.6 coord: 257..283 e-value: 0.0065 score: 16.6 coord: 47..75 e-value: 5.6E-4 score: 20.0
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 78..112 score: 9.569272
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 252..286 score: 8.648523
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 180..333 e-value: 2.7E-15 score: 58.5
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 1..135 e-value: 1.8E-16 score: 62.0
None	No IPR available	PANTHER	PTHR45717	OS12G0527900 PROTEIN	coord: 1..330
None	No IPR available	PANTHER	PTHR45717:SF7	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 1..330

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0012667.2	IVF0012667.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005515	protein binding