IVF0012488 (gene) Melon (IVF77) v1

Overview


Name	IVF0012488
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Cleavage and polyadenylation specificity factor subunit 3-I-like
Location	chr10: 4112952 .. 4116663 (+)
RNA-Seq Expression	IVF0012488
Synteny	IVF0012488

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCCAACAAACAACAATTCAATAACACATCTCTTCTTTTGAATTCTAGGGTTTAGCTCTCTTTCTTCCTTCATCTTCCAACACTGTATGCTCTCTTTCTACACATTTTCTCTCTTCTTCTTACTACTTCACTCTCTTTTTCCCTCTTCTTCAACCTTTTTAGATCTGTTTCTGTTTAACCAATACTTATTATGTTTATATATTCTTGAATTGTAAGATTTAATTCTGTCTTCCCTTTTTCTTTTGATATCTTGCAGCTGGAGAGATTTTTGGGAAAATGGCTACGGTTGGACAGCCGCCCTCCCTTAAGAAACGGGAGGCATCCTCAACCAGAGAGGAGGATCAGCTTATTATAACTCCTCTTGGGGCTGGCAATGAAGTGGGTCGTTCCTGTGTATATATGTCTTACAAAGGCAAAATTGTTTTGGTACTGTTTGAACTCATTATTATTTCTCATTTACTATCTGGTTATAAATATAACATATGGAGGTTTCATTCTGTAAGTGGTAATTTTCCTTTCTCCTCTTGTTTTTCTTGGATGACAGTTTGATTGTGGAATTCACCCTGCTTACTCTGGCATGGCTGCTTTGCCTTACTTTGATGAGATTGACCCCTCAACAATTGATGTCCTGCTCATTACCCAGTATGTATTTCTTTTGTTCTTTCTTTTTAAAATCTCTAGAAAATGCAGCTCTTCACTCGGACATTTTGTATCTTATTGCTCTTTTTTCCTTGTGCAAAATTAGTGAATGACGGTGGATGGTCATTTGCAGTTACACTTTAGAATGGGTATAAGGTCACCGCTCTAACATCTTTGCCTCAAACATAAAAGTTTTTCCTTCCTGATCACATGCTTTCAAAACACGTGTTCTACAATTCGATAAAACTCATGCTTCCTTATTAAAATCATGGAAAATGCAAATATTCACGAGGAGCAGTTTTTCACAGTGTCTCTTTTAATCTGATGATGAGAAGAGATTCCAATTTTTCCATCTTTCTTTATTTTCTGCCTCTTATTGTCTTTTGTGTTCTTTTAACCAAGTTAATTTCATGCACACTTATTCCACAGCTTTCATTTGGACCATGCCGCATCACTCCCTTATTTCTTGGAGAAGGTACTTTCTATTGAATTGCAATGTGATTGTTGCTCGAGTACAGAAACTAATCTAGCATTAACGTGATAGACTACATTCAAAGGACGAGTCTTTATGACTTATGCTACTAAAGCGATCTACAAGTTGTTGCTCTCAGACTTTGTGAAAGTGAGTAAAGTTTCGGTTGAAGATATGTTGTACGATGAGCAGGACATAAATCGTTCCATGGACAAGATTGAGGTAAATGGTTCTCATAGTGGACATTTCTTGAGTCTTGACTTGCTGTTTCATCCATGGTGAAAATTAATTTTCAATGATTCTACCAAAGTCGTACCTTCTATTAAAAATCTGCTTGACGTTTTATCTAGTAACAGTTTATCAAATGTACTTTCCACCCTCACTATCTGTCATTGTCTGTCTCTGCCCTTATCCCCTTCTGCTTTAGTTCTTTGTTAATTTTTTCCATTAACATGTTTGAAATTCAGTTCTTAAAATTTCAGAATAAAATATGATTGAACTACGAGAGGTCTTTTGTTGTATTGGTTGAAATTAGATGTTTTATGAAGTTTAATTTCATTTAAATGTTACATATTTAATAATCTTATTGAAGGATAATAAAATAAGAAAGACATCTGTATGATAATCATGTAAATCCTGGAGATAATAATGATAATGAGCCAGCTATGGTGGAATGCAGAATCATTATATTGGTTACGTTGTTGTCAACTTGCATGGGTTTCATATCCTTGCACCCTGATTTGTATAGTTGAAAATGGATGTCGGTTATTCTCTTATTTAATAATAGTGCACAGTAATCGCAGGTCATTGATTTCCATCAAACAGTAGAAGTTAATGGTATTCGGTTTTGGTGTTACACTGCTGGTCATGTGCTTGGTGCTGCCATGTTTATGGTGGATATCGCTGGTGTCCGAGTTCTATACACTGGAGACTATTCACGTGAAGAAGATCGGCATCTTCGGGCTGCGGAGATGCCTCAGTTTTCTCCTGATGTTTGCATAATTGAATCTACATATGGTGTCCAGCTCCATCAACCTCGACATATCCGGGAGAAGCGTTTTACAGATGTTGTTCATTCAACCATTTCTCAAGGTGGCCGTGTGCTGATTCCCGCTTTTGCCCTTGGACGTGCCCAGGAGCTCCTGCTTATTCTTGATGAGTATTGGGCCAACCATCCTGAGCTCCATAATATTCCCATATATTATGCTTCTCCTCTGGCAAAGAGATGTTTGACTGTATACGAGACATATACGCTCTCCATGAATGATAGGATCCAAAATGCGAAATCAAACCCCTTCAGATTCAAGTACATATCCCCACTAAAGAGCATTGAAGTTTTCAAGGATGTTGGCCCATCAGTGGTGATGGCCAGCCCTGGTGGACTTCAAAGCGGTTTGTCGCGACAGCTCTTTGACATGTGGTGTTCTGACAAGAAAAATTCATGTGTGATTCCTGGTTATGTTGTTGAAGGGACACTAGCTAAAACTATAATCAACGAGCCAAAGGAAGTCACCCTCATGAGTGGACTCATGGCTCCTCTCAACATGCAGGTTCATTACATTTCTTTCTCTGCCCATGCTGACTTTGCGCAGACGAGCGCATTCTTGGAAGAGCTCATGCCGCCCAACATAATTCTCGTGCATGGAGAAGCTAATGAGATGGGGAGGCTCAAACAGAAGCTCATGTCCCAATTTGCGGATCGGAATACAAAGATTCTCACTCCGAAGAATTGTCAGTCCGTTGAAATGTATTTCAACTCTCAGAAAATGGCAAAAACTATCGGAAAATTGGCTGAGAAGACTCCAGAGGTTGGCGAAACTGTCAGCGGTTTACTAGTGAAGAAAGGATTTGCATATCAAATAATGGCACCGGAGGATCTACACATTTTCTCTCAGCTATCAACTGCAAACATCAACCAACGCATTACAATTCCATACTCCAACGCCTTTAATGTGATCGTACGTAGGCTCAAACAGGTATATGAGAGTGTAGAATCTTCAACAGACGACGAATCCGGCGTTCCAATGATTCGTGTGCACGATCGAGTAACCGTGAAGCAGGAATCAGAGAAACATGTCTCACTTCACTGGACATCCGACCCATTAAGCGACATGGTATCAGATTCAGTCGTAGCACTCATTCTCAACATCAACCGCGAGGTTCCGAAAGTGATAGTGGAGTCGGAGGCTGTAAAAACAGAAGAAGAGAACATGAAGAAAGCAGAGAAGGTAATTCATGCCCTGCTTGTTTCGCTTTTTGGCGATGTGAAGTTAGGAGAGAATGGGAAGCTGGTGATTAACGTAGATGGGAATATAGCAGAGGTTGATAAACAAAGTGGTGAAGTAGAAAGTGAAAATGAAGCTCTGAAGGAAAGAGTTAAAACAGCATTCCAAAGAATTCAATGCGCTGTGAACCCAATTCCTCTTTCATCATCATCTTAACTTTTAGCTTTAGCTTTAGCTTTAGCTTTCTATATTTGGCATGTACAAAAAGAACTAATTTGTATTATTTTCTCTTCCTACTTGCAAAAATAGGGACAAAAAAACTGTATTTAACAAGGTTTCTTTTTTACTTCATTTTTTAATCATTCATGTTTTGTTT

mRNA sequence

ACCCAACAAACAACAATTCAATAACACATCTCTTCTTTTGAATTCTAGGGTTTAGCTCTCTTTCTTCCTTCATCTTCCAACACTCTGGAGAGATTTTTGGGAAAATGGCTACGGTTGGACAGCCGCCCTCCCTTAAGAAACGGGAGGCATCCTCAACCAGAGAGGAGGATCAGCTTATTATAACTCCTCTTGGGGCTGGCAATGAAGTGGGTCGTTCCTGTGTATATATGTCTTACAAAGGCAAAATTGTTTTGTTTGATTGTGGAATTCACCCTGCTTACTCTGGCATGGCTGCTTTGCCTTACTTTGATGAGATTGACCCCTCAACAATTGATGTCCTGCTCATTACCCACTTTCATTTGGACCATGCCGCATCACTCCCTTATTTCTTGGAGAAGACTACATTCAAAGGACGAGTCTTTATGACTTATGCTACTAAAGCGATCTACAAGTTGTTGCTCTCAGACTTTGTGAAAGTGAGTAAAGTTTCGGTTGAAGATATGTTGTACGATGAGCAGGACATAAATCGTTCCATGGACAAGATTGAGGTCATTGATTTCCATCAAACAGTAGAAGTTAATGGTATTCGGTTTTGGTGTTACACTGCTGGTCATGTGCTTGGTGCTGCCATGTTTATGGTGGATATCGCTGGTGTCCGAGTTCTATACACTGGAGACTATTCACGTGAAGAAGATCGGCATCTTCGGGCTGCGGAGATGCCTCAGTTTTCTCCTGATGTTTGCATAATTGAATCTACATATGGTGTCCAGCTCCATCAACCTCGACATATCCGGGAGAAGCGTTTTACAGATGTTGTTCATTCAACCATTTCTCAAGGTGGCCGTGTGCTGATTCCCGCTTTTGCCCTTGGACGTGCCCAGGAGCTCCTGCTTATTCTTGATGAGTATTGGGCCAACCATCCTGAGCTCCATAATATTCCCATATATTATGCTTCTCCTCTGGCAAAGAGATGTTTGACTGTATACGAGACATATACGCTCTCCATGAATGATAGGATCCAAAATGCGAAATCAAACCCCTTCAGATTCAAGTACATATCCCCACTAAAGAGCATTGAAGTTTTCAAGGATGTTGGCCCATCAGTGGTGATGGCCAGCCCTGGTGGACTTCAAAGCGGTTTGTCGCGACAGCTCTTTGACATGTGGTGTTCTGACAAGAAAAATTCATGTGTGATTCCTGGTTATGTTGTTGAAGGGACACTAGCTAAAACTATAATCAACGAGCCAAAGGAAGTCACCCTCATGAGTGGACTCATGGCTCCTCTCAACATGCAGGTTCATTACATTTCTTTCTCTGCCCATGCTGACTTTGCGCAGACGAGCGCATTCTTGGAAGAGCTCATGCCGCCCAACATAATTCTCGTGCATGGAGAAGCTAATGAGATGGGGAGGCTCAAACAGAAGCTCATGTCCCAATTTGCGGATCGGAATACAAAGATTCTCACTCCGAAGAATTGTCAGTCCGTTGAAATGTATTTCAACTCTCAGAAAATGGCAAAAACTATCGGAAAATTGGCTGAGAAGACTCCAGAGGTTGGCGAAACTGTCAGCGGTTTACTAGTGAAGAAAGGATTTGCATATCAAATAATGGCACCGGAGGATCTACACATTTTCTCTCAGCTATCAACTGCAAACATCAACCAACGCATTACAATTCCATACTCCAACGCCTTTAATGTGATCGTACGTAGGCTCAAACAGGTATATGAGAGTGTAGAATCTTCAACAGACGACGAATCCGGCGTTCCAATGATTCGTGTGCACGATCGAGTAACCGTGAAGCAGGAATCAGAGAAACATGTCTCACTTCACTGGACATCCGACCCATTAAGCGACATGGTATCAGATTCAGTCGTAGCACTCATTCTCAACATCAACCGCGAGGTTCCGAAAGTGATAGTGGAGTCGGAGGCTGTAAAAACAGAAGAAGAGAACATGAAGAAAGCAGAGAAGGTAATTCATGCCCTGCTTGTTTCGCTTTTTGGCGATGTGAAGTTAGGAGAGAATGGGAAGCTGGTGATTAACGTAGATGGGAATATAGCAGAGGTTGATAAACAAAGTGGTGAAGTAGAAAGTGAAAATGAAGCTCTGAAGGAAAGAGTTAAAACAGCATTCCAAAGAATTCAATGCGCTGTGAACCCAATTCCTCTTTCATCATCATCTTAACTTTTAGCTTTAGCTTTAGCTTTAGCTTTCTATATTTGGCATGTACAAAAAGAACTAATTTGTATTATTTTCTCTTCCTACTTGCAAAAATAGGGACAAAAAAACTGTATTTAACAAGGTTTCTTTTTTACTTCATTTTTTAATCATTCATGTTTTGTTT

Coding sequence (CDS)

ATGGCTACGGTTGGACAGCCGCCCTCCCTTAAGAAACGGGAGGCATCCTCAACCAGAGAGGAGGATCAGCTTATTATAACTCCTCTTGGGGCTGGCAATGAAGTGGGTCGTTCCTGTGTATATATGTCTTACAAAGGCAAAATTGTTTTGTTTGATTGTGGAATTCACCCTGCTTACTCTGGCATGGCTGCTTTGCCTTACTTTGATGAGATTGACCCCTCAACAATTGATGTCCTGCTCATTACCCACTTTCATTTGGACCATGCCGCATCACTCCCTTATTTCTTGGAGAAGACTACATTCAAAGGACGAGTCTTTATGACTTATGCTACTAAAGCGATCTACAAGTTGTTGCTCTCAGACTTTGTGAAAGTGAGTAAAGTTTCGGTTGAAGATATGTTGTACGATGAGCAGGACATAAATCGTTCCATGGACAAGATTGAGGTCATTGATTTCCATCAAACAGTAGAAGTTAATGGTATTCGGTTTTGGTGTTACACTGCTGGTCATGTGCTTGGTGCTGCCATGTTTATGGTGGATATCGCTGGTGTCCGAGTTCTATACACTGGAGACTATTCACGTGAAGAAGATCGGCATCTTCGGGCTGCGGAGATGCCTCAGTTTTCTCCTGATGTTTGCATAATTGAATCTACATATGGTGTCCAGCTCCATCAACCTCGACATATCCGGGAGAAGCGTTTTACAGATGTTGTTCATTCAACCATTTCTCAAGGTGGCCGTGTGCTGATTCCCGCTTTTGCCCTTGGACGTGCCCAGGAGCTCCTGCTTATTCTTGATGAGTATTGGGCCAACCATCCTGAGCTCCATAATATTCCCATATATTATGCTTCTCCTCTGGCAAAGAGATGTTTGACTGTATACGAGACATATACGCTCTCCATGAATGATAGGATCCAAAATGCGAAATCAAACCCCTTCAGATTCAAGTACATATCCCCACTAAAGAGCATTGAAGTTTTCAAGGATGTTGGCCCATCAGTGGTGATGGCCAGCCCTGGTGGACTTCAAAGCGGTTTGTCGCGACAGCTCTTTGACATGTGGTGTTCTGACAAGAAAAATTCATGTGTGATTCCTGGTTATGTTGTTGAAGGGACACTAGCTAAAACTATAATCAACGAGCCAAAGGAAGTCACCCTCATGAGTGGACTCATGGCTCCTCTCAACATGCAGGTTCATTACATTTCTTTCTCTGCCCATGCTGACTTTGCGCAGACGAGCGCATTCTTGGAAGAGCTCATGCCGCCCAACATAATTCTCGTGCATGGAGAAGCTAATGAGATGGGGAGGCTCAAACAGAAGCTCATGTCCCAATTTGCGGATCGGAATACAAAGATTCTCACTCCGAAGAATTGTCAGTCCGTTGAAATGTATTTCAACTCTCAGAAAATGGCAAAAACTATCGGAAAATTGGCTGAGAAGACTCCAGAGGTTGGCGAAACTGTCAGCGGTTTACTAGTGAAGAAAGGATTTGCATATCAAATAATGGCACCGGAGGATCTACACATTTTCTCTCAGCTATCAACTGCAAACATCAACCAACGCATTACAATTCCATACTCCAACGCCTTTAATGTGATCGTACGTAGGCTCAAACAGGTATATGAGAGTGTAGAATCTTCAACAGACGACGAATCCGGCGTTCCAATGATTCGTGTGCACGATCGAGTAACCGTGAAGCAGGAATCAGAGAAACATGTCTCACTTCACTGGACATCCGACCCATTAAGCGACATGGTATCAGATTCAGTCGTAGCACTCATTCTCAACATCAACCGCGAGGTTCCGAAAGTGATAGTGGAGTCGGAGGCTGTAAAAACAGAAGAAGAGAACATGAAGAAAGCAGAGAAGGTAATTCATGCCCTGCTTGTTTCGCTTTTTGGCGATGTGAAGTTAGGAGAGAATGGGAAGCTGGTGATTAACGTAGATGGGAATATAGCAGAGGTTGATAAACAAAGTGGTGAAGTAGAAAGTGAAAATGAAGCTCTGAAGGAAAGAGTTAAAACAGCATTCCAAAGAATTCAATGCGCTGTGAACCCAATTCCTCTTTCATCATCATCTTAA

Protein sequence

MATVGQPPSLKKREASSTREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYSGMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLSDFVKVSKVSVEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHSTISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNIPIYYASPLAKRCLTVYETYTLSMNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKNSCVIPGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADFAQTSAFLEELMPPNIILVHGEANEMGRLKQKLMSQFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEKTPEVGETVSGLLVKKGFAYQIMAPEDLHIFSQLSTANINQRITIPYSNAFNVIVRRLKQVYESVESSTDDESGVPMIRVHDRVTVKQESEKHVSLHWTSDPLSDMVSDSVVALILNINREVPKVIVESEAVKTEEENMKKAEKVIHALLVSLFGDVKLGENGKLVINVDGNIAEVDKQSGEVESENEALKERVKTAFQRIQCAVNPIPLSSSS

Homology

[Close]

BLAST of IVF0012488 vs. ExPASy Swiss-Prot
Match: Q9C952 (Cleavage and polyadenylation specificity factor subunit 3-I OS=Arabidopsis thaliana OX=3702 GN=CPSF73-I PE=1 SV=1)

HSP 1 Score: 1160.2 bits (3000), Expect = 0.0e+00
Identity = 564/687 (82.10%), Postives = 643/687 (93.60%), Query Frame = 0


Query: 9   SLKKREASSTREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYSGMAALPYF 68
           SLK+RE   +R+ DQLI+TPLGAG+EVGRSCVYMS++GK +LFDCGIHPAYSGMAALPYF
Sbjct: 7   SLKRREQPISRDGDQLIVTPLGAGSEVGRSCVYMSFRGKNILFDCGIHPAYSGMAALPYF 66

Query: 69  DEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLSDFVKVSKV 128
           DEIDPS+IDVLLITHFH+DHAASLPYFLEKTTF GRVFMT+ATKAIYKLLL+D+VKVSKV
Sbjct: 67  DEIDPSSIDVLLITHFHIDHAASLPYFLEKTTFNGRVFMTHATKAIYKLLLTDYVKVSKV 126

Query: 129 SVEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVDIAGVRVLY 188
           SVEDML+DEQDIN+SMDKIEVIDFHQTVEVNGI+FWCYTAGHVLGAAMFMVDIAGVR+LY
Sbjct: 127 SVEDMLFDEQDINKSMDKIEVIDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAGVRILY 186

Query: 189 TGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHSTISQGGRV 248
           TGDYSREEDRHLRAAE+PQFSPD+CIIEST GVQLHQ RHIREKRFTDV+HST++QGGRV
Sbjct: 187 TGDYSREEDRHLRAAELPQFSPDICIIESTSGVQLHQSRHIREKRFTDVIHSTVAQGGRV 246

Query: 249 LIPAFALGRAQELLLILDEYWANHPELHNIPIYYASPLAKRCLTVYETYTLSMNDRIQN- 308
           LIPAFALGRAQELLLILDEYWANHP+LHNIPIYYASPLAK+C+ VY+TY LSMNDRI+N 
Sbjct: 247 LIPAFALGRAQELLLILDEYWANHPDLHNIPIYYASPLAKKCMAVYQTYILSMNDRIRNQ 306

Query: 309 -AKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKNSCVIPG 368
            A SNPF FK+ISPL SI+ F DVGPSVVMA+PGGLQSGLSRQLFD WCSDKKN+C+IPG
Sbjct: 307 FANSNPFVFKHISPLNSIDDFNDVGPSVVMATPGGLQSGLSRQLFDSWCSDKKNACIIPG 366

Query: 369 YVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADFAQTSAFLEELMPPNIIL 428
           Y+VEGTLAKTIINEPKEVTLM+GL APLNMQVHYISFSAHAD+AQTS FL+ELMPPNIIL
Sbjct: 367 YMVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHADYAQTSTFLKELMPPNIIL 426

Query: 429 VHGEANEMGRLKQKLMSQFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEKTPEVGE 488
           VHGEANEM RLKQKL+++F D NTKI+TPKNC+SVEMYFNS+K+AKTIG+LAEKTP+VG+
Sbjct: 427 VHGEANEMMRLKQKLLTEFPDGNTKIMTPKNCESVEMYFNSEKLAKTIGRLAEKTPDVGD 486

Query: 489 TVSGLLVKKGFAYQIMAPEDLHIFSQLSTANINQRITIPYSNAFNVIVRRLKQVYESVES 548
           TVSG+LVKKGF YQIMAP++LH+FSQLSTA + QRITIP+  AF VI  RL++++ESVE 
Sbjct: 487 TVSGILVKKGFTYQIMAPDELHVFSQLSTATVTQRITIPFVGAFGVIKHRLEKIFESVEF 546

Query: 549 STDDESGVPMIRVHDRVTVKQESEKHVSLHWTSDPLSDMVSDSVVALILNINREVPKVIV 608
           STD+ESG+P ++VH+RVTVKQESEKH+SL W+SDP+SDMVSDS+VALILNI+REVPK+++
Sbjct: 547 STDEESGLPALKVHERVTVKQESEKHISLQWSSDPISDMVSDSIVALILNISREVPKIVM 606

Query: 609 ESE-AVKTEEENMKKAEKVIHALLVSLFGDVKLGENGKLVINVDGNIAEVDKQSGEVESE 668
           E E AVK+EEEN KK EKVI+ALLVSLFGDVKLGENGKLVI VDGN+A++DK+SGEVESE
Sbjct: 607 EEEDAVKSEEENGKKVEKVIYALLVSLFGDVKLGENGKLVIRVDGNVAQLDKESGEVESE 666

Query: 669 NEALKERVKTAFQRIQCAVNPIPLSSS 693
           +  LKERV+ AF+RIQ AV PIPLS+S
Sbjct: 667 HSGLKERVRVAFERIQSAVKPIPLSAS 693

[Close]

BLAST of IVF0012488 vs. ExPASy Swiss-Prot
Match: P79101 (Cleavage and polyadenylation specificity factor subunit 3 OS=Bos taurus OX=9913 GN=CPSF3 PE=1 SV=1)

HSP 1 Score: 711.4 bits (1835), Expect = 9.6e-204
Identity = 361/687 (52.55%), Postives = 486/687 (70.74%), Query Frame = 0


Query: 15  ASSTREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYSGMAALPYFDEIDPS 74
           A    E DQL+I PLGAG EVGRSC+ + +KG+ ++ DCGIHP   GM ALPY D IDP+
Sbjct: 3   AIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPA 62

Query: 75  TIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLSDFVKVSKVSVEDML 134
            ID+LLI+HFHLDH  +LP+FL+KT+FKGR FMT+ATKAIY+ LLSD+VKVS +S +DML
Sbjct: 63  EIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDML 122

Query: 135 YDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSR 194
           Y E D+  SMDKIE I+FH+  EV GI+FWCY AGHVLGAAMFM++IAGV++LYTGD+SR
Sbjct: 123 YTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSR 182

Query: 195 EEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHSTISQGGRVLIPAFA 254
           +EDRHL AAE+P   PD+ IIESTYG  +H+ R  RE RF + VH  +++GGR LIP FA
Sbjct: 183 QEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFA 242

Query: 255 LGRAQELLLILDEYWANHPELHNIPIYYASPLAKRCLTVYETYTLSMNDRI--QNAKSNP 314
           LGRAQELLLILDEYW NHPELH+IPIYYAS LAK+C+ VY+TY  +MND+I  Q   +NP
Sbjct: 243 LGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNP 302

Query: 315 FRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKNSCVIPGYVVEGT 374
           F FK+IS LKS++ F D+GPSVVMASPG +QSGLSR+LF+ WC+DK+N  +I GY VEGT
Sbjct: 303 FVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGT 362

Query: 375 LAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADFAQTSAFLEELMPPNIILVHGEAN 434
           LAK I++EP+E+T MSG   PL M V YISFSAH D+ QTS F+  L PP++ILVHGE N
Sbjct: 363 LAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN 422

Query: 435 EMGRLKQKLMSQFADR---NTKILTPKNCQSVEMYFNSQKMAKTIGKLAEKTPEVGETVS 494
           EM RLK  L+ ++ D    + ++  P+N ++V + F  +K+AK +G LA+K PE G+ VS
Sbjct: 423 EMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVS 482

Query: 495 GLLVKKGFAYQIMAPEDLHIFSQLSTANINQRITIPYSNAFNVIVRRLKQVYESVESSTD 554
           G+LVK+ F Y I++P DL  ++ L+ + + Q   IPY+  FN++  +L+++   VE    
Sbjct: 483 GILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFNLLYYQLQKLTGDVEELEI 542

Query: 555 DESGVPMIRVHDRVTVKQESEKHVSLHWTSDPLSDMVSDSVVALILNI--NREVPKVIVE 614
            E   P ++V   +TV QE    V L W ++P +DM +D+V  +IL +  N ++ K  V+
Sbjct: 543 QEK--PALKVFKNITVIQEPGM-VVLEWLANPSNDMYADTVTTVILEVQSNPKIRKGAVQ 602

Query: 615 SEAVKTEEENMKKAEKVIHALLVSLFGD--VKLGENGKLVINVDGNIAEVDKQSGEVESE 674
             + K E   M    K +  +L  +FG+  V + +   L + VDG  A ++ ++  VE E
Sbjct: 603 KVSKKLE---MHVYSKRLEIMLQDIFGEDCVSVKDGSILSVTVDGKTANINLETRTVECE 662

Query: 675 -----NEALKERVKTAFQRIQCAVNPI 688
                +E+L+E V+ A QR+  A+ P+
Sbjct: 663 EGSEDDESLREMVELAAQRLYEALTPV 683

[Close]

BLAST of IVF0012488 vs. ExPASy Swiss-Prot
Match: Q9UKF6 (Cleavage and polyadenylation specificity factor subunit 3 OS=Homo sapiens OX=9606 GN=CPSF3 PE=1 SV=1)

HSP 1 Score: 711.1 bits (1834), Expect = 1.3e-203
Identity = 361/687 (52.55%), Postives = 487/687 (70.89%), Query Frame = 0


Query: 15  ASSTREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYSGMAALPYFDEIDPS 74
           A    E DQL+I PLGAG EVGRSC+ + +KG+ ++ DCGIHP   GM ALPY D IDP+
Sbjct: 3   AIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPA 62

Query: 75  TIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLSDFVKVSKVSVEDML 134
            ID+LLI+HFHLDH  +LP+FL+KT+FKGR FMT+ATKAIY+ LLSD+VKVS +S +DML
Sbjct: 63  EIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDML 122

Query: 135 YDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSR 194
           Y E D+  SMDKIE I+FH+  EV GI+FWCY AGHVLGAAMFM++IAGV++LYTGD+SR
Sbjct: 123 YTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSR 182

Query: 195 EEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHSTISQGGRVLIPAFA 254
           +EDRHL AAE+P   PD+ IIESTYG  +H+ R  RE RF + VH  +++GGR LIP FA
Sbjct: 183 QEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFA 242

Query: 255 LGRAQELLLILDEYWANHPELHNIPIYYASPLAKRCLTVYETYTLSMNDRI--QNAKSNP 314
           LGRAQELLLILDEYW NHPELH+IPIYYAS LAK+C+ VY+TY  +MND+I  Q   +NP
Sbjct: 243 LGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNP 302

Query: 315 FRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKNSCVIPGYVVEGT 374
           F FK+IS LKS++ F D+GPSVVMASPG +QSGLSR+LF+ WC+DK+N  +I GY VEGT
Sbjct: 303 FVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGT 362

Query: 375 LAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADFAQTSAFLEELMPPNIILVHGEAN 434
           LAK I++EP+E+T MSG   PL M V YISFSAH D+ QTS F+  L PP++ILVHGE N
Sbjct: 363 LAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN 422

Query: 435 EMGRLKQKLMSQFADR---NTKILTPKNCQSVEMYFNSQKMAKTIGKLAEKTPEVGETVS 494
           EM RLK  L+ ++ D    + ++  P+N ++V + F  +K+AK +G LA+K PE G+ VS
Sbjct: 423 EMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVS 482

Query: 495 GLLVKKGFAYQIMAPEDLHIFSQLSTANINQRITIPYSNAFNVIVRRLKQVYESVESSTD 554
           G+LVK+ F Y I++P DL  ++ L+ + + Q   IPY+  FN++  +L+++   VE    
Sbjct: 483 GILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFNLLCYQLQKLTGDVEELEI 542

Query: 555 DESGVPMIRVHDRVTVKQESEKHVSLHWTSDPLSDMVSDSVVALILNI--NREVPKVIVE 614
            E   P ++V   +TV QE    V L W ++P +DM +D+V  +IL +  N ++ K  V+
Sbjct: 543 QEK--PALKVFKNITVIQEPGM-VVLEWLANPSNDMYADTVTTVILEVQSNPKIRKGAVQ 602

Query: 615 SEAVKTEEENMKKAEKVIHALLVSLFGD--VKLGENGKLVINVDGNIAEVDKQSGEVESE 674
             + K E   M    K +  +L  +FG+  V + ++  L + VDG  A ++ ++  VE E
Sbjct: 603 KVSKKLE---MHVYSKRLEIMLQDIFGEDCVSVKDDSILSVTVDGKTANLNLETRTVECE 662

Query: 675 -----NEALKERVKTAFQRIQCAVNPI 688
                +E+L+E V+ A QR+  A+ P+
Sbjct: 663 EGSEDDESLREMVELAAQRLYEALTPV 683

[Close]

BLAST of IVF0012488 vs. ExPASy Swiss-Prot
Match: Q9QXK7 (Cleavage and polyadenylation specificity factor subunit 3 OS=Mus musculus OX=10090 GN=Cpsf3 PE=1 SV=2)

HSP 1 Score: 708.4 bits (1827), Expect = 8.1e-203
Identity = 359/687 (52.26%), Postives = 486/687 (70.74%), Query Frame = 0


Query: 15  ASSTREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYSGMAALPYFDEIDPS 74
           A    E DQL+I PLGAG EVGRSC+ + +KG+ ++ DCGIHP   GM ALPY D IDP+
Sbjct: 3   AIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPA 62

Query: 75  TIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLSDFVKVSKVSVEDML 134
            ID+LLI+HFHLDH  +LP+FL+KT+FKGR FMT+ATKAIY+ LLSD+VKVS +S +DML
Sbjct: 63  EIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDML 122

Query: 135 YDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSR 194
           Y E D+  SMDKIE I+FH+  EV GI+FWCY AGHVLGAAMFM++IAGV++LYTGD+SR
Sbjct: 123 YTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSR 182

Query: 195 EEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHSTISQGGRVLIPAFA 254
           +EDRHL AAE+P   PD+ IIESTYG  +H+ R  RE RF + VH  +++GGR LIP FA
Sbjct: 183 QEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFA 242

Query: 255 LGRAQELLLILDEYWANHPELHNIPIYYASPLAKRCLTVYETYTLSMNDRI--QNAKSNP 314
           LGRAQELLLILDEYW NHPELH+IPIYYAS LAK+C+ VY+TY  +MND+I  Q   +NP
Sbjct: 243 LGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNP 302

Query: 315 FRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKNSCVIPGYVVEGT 374
           F FK+IS LKS++ F D+GPSVVMASPG +Q+GLSR+LF+ WC+DK+N  +I GY VEGT
Sbjct: 303 FVFKHISNLKSMDHFDDIGPSVVMASPGMIQNGLSRELFESWCTDKRNGVIIAGYCVEGT 362

Query: 375 LAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADFAQTSAFLEELMPPNIILVHGEAN 434
           LAK I++EP+E+T MSG   PL M V YISFSAH D+ QTS F+  L PP++ILVHGE N
Sbjct: 363 LAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN 422

Query: 435 EMGRLKQKLMSQFADR---NTKILTPKNCQSVEMYFNSQKMAKTIGKLAEKTPEVGETVS 494
           EM RLK  L+ ++ D    + ++  P+N ++V + F  +K+AK +G LA+K PE G+ VS
Sbjct: 423 EMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVS 482

Query: 495 GLLVKKGFAYQIMAPEDLHIFSQLSTANINQRITIPYSNAFNVIVRRLKQVYESVESSTD 554
           G+LVK+ F Y I++P DL  ++ L+ + + Q   IPY+  F ++  +L+++   VE    
Sbjct: 483 GILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFYLLYYQLQKLTGDVEELEI 542

Query: 555 DESGVPMIRVHDRVTVKQESEKHVSLHWTSDPLSDMVSDSVVALILNI--NREVPKVIVE 614
            E   P ++V   +TV QE    V L W ++P +DM +D+V  +IL +  N ++ K  V+
Sbjct: 543 QEK--PALKVFKSITVVQEPGM-VVLEWLANPSNDMYADTVTTVILEVQSNPKIRKGAVQ 602

Query: 615 SEAVKTEEENMKKAEKVIHALLVSLFGD--VKLGENGKLVINVDGNIAEVDKQSGEVESE 674
             + K E   M    K +  +L  +FG+  V + ++  L + VDG  A ++ ++  VE E
Sbjct: 603 KVSKKLE---MHVYSKRLEVMLQDIFGEDCVSVKDDSVLSVTVDGKTANINLETRAVECE 662

Query: 675 -----NEALKERVKTAFQRIQCAVNPI 688
                +E+L+E V+ A QR+  A+ P+
Sbjct: 663 EGSEDDESLREMVELAAQRLYEALTPV 683

[Close]

BLAST of IVF0012488 vs. ExPASy Swiss-Prot
Match: Q86A79 (Cleavage and polyadenylation specificity factor subunit 3 OS=Dictyostelium discoideum OX=44689 GN=cpsf3 PE=3 SV=1)

HSP 1 Score: 686.8 bits (1771), Expect = 2.5e-196
Identity = 349/732 (47.68%), Postives = 494/732 (67.49%), Query Frame = 0


Query: 10  LKKREASSTREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYSGMAALPYFD 69
           LK+     T ++D L ITP+G+G+EVGRSCV + YKGK V+FDCG+HPAYSG+ +LP+FD
Sbjct: 22  LKRPLKGGTEDDDILEITPIGSGSEVGRSCVLLKYKGKKVMFDCGVHPAYSGLVSLPFFD 81

Query: 70  EI--DPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLSDFVKVSK 129
            I  D   ID+LL++HFHLDHAA++PYF+ KT FKGRVFMT+ TKAIY +LLSD+VKVS 
Sbjct: 82  SIESDIPDIDLLLVSHFHLDHAAAVPYFVGKTKFKGRVFMTHPTKAIYGMLLSDYVKVSN 141

Query: 130 VS-VEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVDIAGVRV 189
           ++  +DML+D+ D++RS++KIE + + Q VE NGI+  C+ AGHVLGAAMFM++IAGV++
Sbjct: 142 ITRDDDMLFDKSDLDRSLEKIEKVRYRQKVEHNGIKVTCFNAGHVLGAAMFMIEIAGVKI 201

Query: 190 LYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHSTISQGG 249
           LYTGD+SR+EDRHL  AE P    DV IIESTYGVQ+H+PR  REKRFT  VH  + + G
Sbjct: 202 LYTGDFSRQEDRHLMGAETPPVKVDVLIIESTYGVQVHEPRLEREKRFTSSVHQVVERNG 261

Query: 250 RVLIPAFALGRAQELLLILDEYWANHPELHNIPIYYASPLAKRCLTVYETYTLSMNDRI- 309
           + LIP FALGRAQELLLILDEYW  +P+LH++PIYYAS LAK+C+ VY TY   MNDR+ 
Sbjct: 262 KCLIPVFALGRAQELLLILDEYWIANPQLHHVPIYYASALAKKCMGVYRTYINMMNDRVR 321

Query: 310 -QNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKNSCVI 369
            Q   SNPF FK+I  +K IE F D GP V MASPG LQSGLSRQLF+ WCSDK+N  VI
Sbjct: 322 AQFDVSNPFEFKHIKNIKGIESFDDRGPCVFMASPGMLQSGLSRQLFERWCSDKRNGIVI 381

Query: 370 PGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADFAQTSAFLEELMPPNI 429
           PGY VEGTLAK I++EP E+T +  +  PLN+ V Y+SFSAH+DF QTS F++E+ PP++
Sbjct: 382 PGYSVEGTLAKHIMSEPAEITRLDNVNVPLNLTVSYVSFSAHSDFLQTSEFIQEIQPPHV 441

Query: 430 ILVHGEANEMGRLKQKLMSQFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEKTPEV 489
           +LVHG+ANEM RL+Q L+++F  +   +LTPKN  SV + F  +K+AKT+G +    P+ 
Sbjct: 442 VLVHGDANEMSRLRQSLVAKF--KTINVLTPKNAMSVALEFRPEKVAKTLGSIITNPPKQ 501

Query: 490 GETVSGLLVKKGFAYQIMAPEDLHIFSQLSTANINQRITIPYSNAFNVIVRRLKQVYESV 549
            + + G+LV K F + I++  D+H ++ L T  I Q++T+P++  +++++  L+Q+YE +
Sbjct: 502 NDIIQGILVTKDFTHHILSASDIHNYTNLKTNIIKQKLTLPFAQTYHILISTLEQIYEQI 561

Query: 550 ESSTDDESG----VPMIRVHDRVTVKQESEKHVSLHWTSDPLSDMVSDSVVALILNI--- 609
             ST+   G     P I +++ + +       + L W S+ ++DM+ DS++ALI  I   
Sbjct: 562 IESTESTGGGGNEKPTITIYNEIKLIYNIGVSIILEWNSNTVNDMICDSIIALISQIELN 621

Query: 610 ----------------NREVPKVIVESEAVKTEEEN---------------MKKAEKV-- 669
                             E+ K  +E E  K +E+                 +K+ K+  
Sbjct: 622 PLSIKVRNPNFNNIDEKEEITKDDIEKEKEKEKEQQDGDDDDDDEIQIKVVSRKSRKLSN 681

Query: 670 -------IHALLVSLFGDVKLGENGKLVI--NVDGNIAEVDKQSGEVESENEALKERVKT 688
                  +  LL   +G+ K+ EN  L++  N+D   A +  ++  VES ++ LK++++ 
Sbjct: 682 KLNTITEVKLLLEQQYGNFKVDENDPLILHFNLDNQKAIIHLETLTVESLDQILKQKIEN 741

[Close]

BLAST of IVF0012488 vs. ExPASy TrEMBL
Match: A0A5A7SY15 (Cleavage and polyadenylation specificity factor subunit 3-I-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002530 PE=4 SV=1)

HSP 1 Score: 1328.2 bits (3436), Expect = 0.0e+00
Identity = 677/693 (97.69%), Postives = 677/693 (97.69%), Query Frame = 0


Query: 1   MATVGQPPSLKKREASSTREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYS 60
           MATVGQPPSLKKREASSTREEDQLIITPLGAGNE                FDCGIHPAYS
Sbjct: 1   MATVGQPPSLKKREASSTREEDQLIITPLGAGNE----------------FDCGIHPAYS 60

Query: 61  GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS 120
           GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS
Sbjct: 61  GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS 120

Query: 121 DFVKVSKVSVEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD 180
           DFVKVSKVSVEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD
Sbjct: 121 DFVKVSKVSVEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD 180

Query: 181 IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS 240
           IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS
Sbjct: 181 IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS 240

Query: 241 TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNIPIYYASPLAKRCLTVYETYTLS 300
           TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNIPIYYASPLAKRCLTVYETYTLS
Sbjct: 241 TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNIPIYYASPLAKRCLTVYETYTLS 300

Query: 301 MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKN 360
           MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKN
Sbjct: 301 MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKN 360

Query: 361 SCVIPGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADFAQTSAFLEELM 420
           SCVIPGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADFAQTSAFLEELM
Sbjct: 361 SCVIPGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADFAQTSAFLEELM 420

Query: 421 PPNIILVHGEANEMGRLKQKLMSQFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEK 480
           PPNIILVHGEANEMGRLKQKLMSQFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEK
Sbjct: 421 PPNIILVHGEANEMGRLKQKLMSQFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEK 480

Query: 481 TPEVGETVSGLLVKKGFAYQIMAPEDLHIFSQLSTANINQRITIPYSNAFNVIVRRLKQV 540
           TPEVGETVSGLLVKKGFAYQIMAPEDLHIFSQLSTANINQRITIPYSNAFNVIVRRLKQV
Sbjct: 481 TPEVGETVSGLLVKKGFAYQIMAPEDLHIFSQLSTANINQRITIPYSNAFNVIVRRLKQV 540

Query: 541 YESVESSTDDESGVPMIRVHDRVTVKQESEKHVSLHWTSDPLSDMVSDSVVALILNINRE 600
           YESVESSTDDESGVPMIRVHDRVTVKQESEKHVSLHWTSDPLSDMVSDSVVALILNINRE
Sbjct: 541 YESVESSTDDESGVPMIRVHDRVTVKQESEKHVSLHWTSDPLSDMVSDSVVALILNINRE 600

Query: 601 VPKVIVESEAVKTEEENMKKAEKVIHALLVSLFGDVKLGENGKLVINVDGNIAEVDKQSG 660
           VPKVIVESEAVKTEEENMKKAEKVIHALLVSLFGDVKLGENGKLVINVDGNIAEVDKQSG
Sbjct: 601 VPKVIVESEAVKTEEENMKKAEKVIHALLVSLFGDVKLGENGKLVINVDGNIAEVDKQSG 660

Query: 661 EVESENEALKERVKTAFQRIQCAVNPIPLSSSS 694
           EVESENEALKERVKTAFQRIQCAVNPIPLSSSS
Sbjct: 661 EVESENEALKERVKTAFQRIQCAVNPIPLSSSS 677

[Close]

BLAST of IVF0012488 vs. ExPASy TrEMBL
Match: A0A6J1DE61 (cleavage and polyadenylation specificity factor subunit 3-I OS=Momordica charantia OX=3673 GN=LOC111019708 PE=4 SV=1)

HSP 1 Score: 1325.8 bits (3430), Expect = 0.0e+00
Identity = 667/692 (96.39%), Postives = 681/692 (98.41%), Query Frame = 0


Query: 1   MATVGQPPSLKKREASSTREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYS 60
           MA+V QPPSLKKRE+S+TREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYS
Sbjct: 1   MASVVQPPSLKKRESSATREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYS 60

Query: 61  GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS 120
           GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS
Sbjct: 61  GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS 120

Query: 121 DFVKVSKVSVEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD 180
           DFVKVSKVSVEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD
Sbjct: 121 DFVKVSKVSVEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD 180

Query: 181 IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS 240
           IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS
Sbjct: 181 IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS 240

Query: 241 TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNIPIYYASPLAKRCLTVYETYTLS 300
           TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNIPIYYASPLAKRCLTVYETYTLS
Sbjct: 241 TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNIPIYYASPLAKRCLTVYETYTLS 300

Query: 301 MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKN 360
           MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKN
Sbjct: 301 MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKN 360

Query: 361 SCVIPGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADFAQTSAFLEELM 420
           +CV+PGYVVEGTLAKTIINEPKEVTLM+GLMAPLNMQVHYISFSAHADFAQTSAFLEELM
Sbjct: 361 ACVLPGYVVEGTLAKTIINEPKEVTLMNGLMAPLNMQVHYISFSAHADFAQTSAFLEELM 420

Query: 421 PPNIILVHGEANEMGRLKQKLMSQFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEK 480
           PPNIILVHGEANEMGRLKQKL+SQFADRNTKILTPKNCQSVEMYFNSQKMAKTIG+LAEK
Sbjct: 421 PPNIILVHGEANEMGRLKQKLISQFADRNTKILTPKNCQSVEMYFNSQKMAKTIGRLAEK 480

Query: 481 TPEVGETVSGLLVKKGFAYQIMAPEDLHIFSQLSTANINQRITIPYSNAFNVIVRRLKQV 540
           TPE GETVSGLLVKKGFAYQIMA +DLHIFSQLSTANINQRITIPYSNAFNVIVRRLKQV
Sbjct: 481 TPEAGETVSGLLVKKGFAYQIMASDDLHIFSQLSTANINQRITIPYSNAFNVIVRRLKQV 540

Query: 541 YESVESSTDDESGVPMIRVHDRVTVKQESEKHVSLHWTSDPLSDMVSDSVVALILNINRE 600
           YESVES TD+ESGVP I VHDRVTVK ESEKHVSLHWTSDPLSDMVSDSVVALILNINRE
Sbjct: 541 YESVESLTDEESGVPAICVHDRVTVKHESEKHVSLHWTSDPLSDMVSDSVVALILNINRE 600

Query: 601 VPKVIVESEAVKTEEENMKKAEKVIHALLVSLFGDVKLGENGKLVINVDGNIAEVDKQSG 660
           VPKVIVESEA KTEEEN KKAEKVIHALLVSLFGDVKLGENGKLVINVDG+IAE+DKQSG
Sbjct: 601 VPKVIVESEAAKTEEENEKKAEKVIHALLVSLFGDVKLGENGKLVINVDGSIAELDKQSG 660

Query: 661 EVESENEALKERVKTAFQRIQCAVNPIPLSSS 693
           EVESENE LKERVKTAF+RIQCAV PIPLS+S
Sbjct: 661 EVESENEGLKERVKTAFRRIQCAVKPIPLSAS 692

[Close]

BLAST of IVF0012488 vs. ExPASy TrEMBL
Match: A0A0A0KV82 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G587170 PE=4 SV=1)

HSP 1 Score: 1325.5 bits (3429), Expect = 0.0e+00
Identity = 672/693 (96.97%), Postives = 680/693 (98.12%), Query Frame = 0


Query: 1   MATVGQPPSLKKREASSTREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYS 60
           MA++GQPPSLKKR+ASSTREEDQLIITPLGAGNEVGRSC           FDCGIHPAYS
Sbjct: 1   MASLGQPPSLKKRDASSTREEDQLIITPLGAGNEVGRSC-----------FDCGIHPAYS 60

Query: 61  GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS 120
           GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLL 
Sbjct: 61  GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLL 120

Query: 121 DFVKVSKVSVEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD 180
           DFVKVSKVSVEDMLYDEQDI+RSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD
Sbjct: 121 DFVKVSKVSVEDMLYDEQDISRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD 180

Query: 181 IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS 240
           IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS
Sbjct: 181 IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS 240

Query: 241 TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNIPIYYASPLAKRCLTVYETYTLS 300
           TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNIPIYYASPLAKRCLTVYETYTLS
Sbjct: 241 TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNIPIYYASPLAKRCLTVYETYTLS 300

Query: 301 MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKN 360
           MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASP GLQSGLSRQLF+MWCSDKKN
Sbjct: 301 MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPSGLQSGLSRQLFEMWCSDKKN 360

Query: 361 SCVIPGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADFAQTSAFLEELM 420
           SCV+PGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADFAQTSAFLEELM
Sbjct: 361 SCVLPGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADFAQTSAFLEELM 420

Query: 421 PPNIILVHGEANEMGRLKQKLMSQFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEK 480
           PPNIILVHGEANEMGRLKQKLMSQFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEK
Sbjct: 421 PPNIILVHGEANEMGRLKQKLMSQFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEK 480

Query: 481 TPEVGETVSGLLVKKGFAYQIMAPEDLHIFSQLSTANINQRITIPYSNAFNVIVRRLKQV 540
           TP+VGETVSGLLVKKGFAYQIMAPEDLHIFSQLSTANINQRITIPYSNAFNVIVRRLKQV
Sbjct: 481 TPDVGETVSGLLVKKGFAYQIMAPEDLHIFSQLSTANINQRITIPYSNAFNVIVRRLKQV 540

Query: 541 YESVESSTDDESGVPMIRVHDRVTVKQESEKHVSLHWTSDPLSDMVSDSVVALILNINRE 600
           YESVESSTDDESGVPMIRVHDRVTVKQESEKHVSLHWTSDPLSDMVSDSVVALILNINRE
Sbjct: 541 YESVESSTDDESGVPMIRVHDRVTVKQESEKHVSLHWTSDPLSDMVSDSVVALILNINRE 600

Query: 601 VPKVIVESEAVKTEEENMKKAEKVIHALLVSLFGDVKLGENGKLVINVDGNIAEVDKQSG 660
           VPKVIVESEAVKTEEEN+KKAEKVIHALLVSLFGDVKLGENGKLVINVDGNIAEVDKQSG
Sbjct: 601 VPKVIVESEAVKTEEENVKKAEKVIHALLVSLFGDVKLGENGKLVINVDGNIAEVDKQSG 660

Query: 661 EVESENEALKERVKTAFQRIQCAVNPIPLSSSS 694
           EVESENEALKERVKTAFQRIQCAVNPIPLSSSS
Sbjct: 661 EVESENEALKERVKTAFQRIQCAVNPIPLSSSS 682

[Close]

BLAST of IVF0012488 vs. ExPASy TrEMBL
Match: A0A6J1G1N4 (cleavage and polyadenylation specificity factor subunit 3-I-like OS=Cucurbita moschata OX=3662 GN=LOC111449842 PE=4 SV=1)

HSP 1 Score: 1322.8 bits (3422), Expect = 0.0e+00
Identity = 663/691 (95.95%), Postives = 681/691 (98.55%), Query Frame = 0


Query: 1   MATVGQPPSLKKREASSTREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYS 60
           MA+VG  PSLKKRE+S+TREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYS
Sbjct: 1   MASVGPSPSLKKRESSATREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYS 60

Query: 61  GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS 120
           GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS
Sbjct: 61  GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS 120

Query: 121 DFVKVSKVSVEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD 180
           DFVKVSKVS+EDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD
Sbjct: 121 DFVKVSKVSIEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD 180

Query: 181 IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS 240
           IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS
Sbjct: 181 IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS 240

Query: 241 TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNIPIYYASPLAKRCLTVYETYTLS 300
           TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHN+PIYYASPLAKRCLTVYETYTLS
Sbjct: 241 TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNVPIYYASPLAKRCLTVYETYTLS 300

Query: 301 MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKN 360
           MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFD+WCSDKKN
Sbjct: 301 MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDLWCSDKKN 360

Query: 361 SCVIPGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADFAQTSAFLEELM 420
           SCV+PGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHAD+AQTSAFLEELM
Sbjct: 361 SCVLPGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADYAQTSAFLEELM 420

Query: 421 PPNIILVHGEANEMGRLKQKLMSQFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEK 480
           PPNIILVHGEANEMGRLKQKLMS+FADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAE 
Sbjct: 421 PPNIILVHGEANEMGRLKQKLMSKFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEN 480

Query: 481 TPEVGETVSGLLVKKGFAYQIMAPEDLHIFSQLSTANINQRITIPYSNAFNVIVRRLKQV 540
           TPEV ETVSGLLVKKGFAYQIMAP+DLHIFSQLSTANI QRITIPY+NAFNVIVRRLKQV
Sbjct: 481 TPEVDETVSGLLVKKGFAYQIMAPDDLHIFSQLSTANIYQRITIPYTNAFNVIVRRLKQV 540

Query: 541 YESVESSTDDESGVPMIRVHDRVTVKQESEKHVSLHWTSDPLSDMVSDSVVALILNINRE 600
           YESVESSTD+ESGVP +RVHDRVTVK ESE+HVSLHWTSDPLSDMVSDSVVALILNINRE
Sbjct: 541 YESVESSTDEESGVPTVRVHDRVTVKHESERHVSLHWTSDPLSDMVSDSVVALILNINRE 600

Query: 601 VPKVIVESEAVKTEEENMKKAEKVIHALLVSLFGDVKLGENGKLVINVDGNIAEVDKQSG 660
           VPKVIVESEAVKTEEEN KKAEKVIHALLVSLFGDVKLGENGKLV+NVDG+IAEVDKQSG
Sbjct: 601 VPKVIVESEAVKTEEENEKKAEKVIHALLVSLFGDVKLGENGKLVVNVDGSIAEVDKQSG 660

Query: 661 EVESENEALKERVKTAFQRIQCAVNPIPLSS 692
           EVESENEALKERVKTAF+RIQ AV PIPLS+
Sbjct: 661 EVESENEALKERVKTAFRRIQSAVKPIPLSA 691

[Close]

BLAST of IVF0012488 vs. ExPASy TrEMBL
Match: A0A6J1GZU7 (cleavage and polyadenylation specificity factor subunit 3-I-like OS=Cucurbita moschata OX=3662 GN=LOC111458343 PE=4 SV=1)

HSP 1 Score: 1319.7 bits (3414), Expect = 0.0e+00
Identity = 658/691 (95.22%), Postives = 681/691 (98.55%), Query Frame = 0


Query: 1   MATVGQPPSLKKREASSTREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYS 60
           MA+VGQPPS KKRE S+TREED+LI+TPLGAGNEVGRSCVYMSYKGK+VLFDCGIHPAYS
Sbjct: 1   MASVGQPPSFKKRELSATREEDKLIVTPLGAGNEVGRSCVYMSYKGKVVLFDCGIHPAYS 60

Query: 61  GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS 120
           GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS
Sbjct: 61  GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS 120

Query: 121 DFVKVSKVSVEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD 180
           DFVKVSKVS+EDML+DEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD
Sbjct: 121 DFVKVSKVSIEDMLFDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD 180

Query: 181 IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS 240
           IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS
Sbjct: 181 IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS 240

Query: 241 TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNIPIYYASPLAKRCLTVYETYTLS 300
           TISQGGRVLIPAFALGRAQELLLILDEYWANHP+LHN+PIYYASPLAKRCLTVYETYTLS
Sbjct: 241 TISQGGRVLIPAFALGRAQELLLILDEYWANHPDLHNVPIYYASPLAKRCLTVYETYTLS 300

Query: 301 MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKN 360
           MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFD+WCSDKKN
Sbjct: 301 MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDLWCSDKKN 360

Query: 361 SCVIPGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADFAQTSAFLEELM 420
           SCV+PGYVVEGTLAKTIINEPKEVTLMSGL APLNMQVHYISFSAHADFAQTSAFLEELM
Sbjct: 361 SCVLPGYVVEGTLAKTIINEPKEVTLMSGLTAPLNMQVHYISFSAHADFAQTSAFLEELM 420

Query: 421 PPNIILVHGEANEMGRLKQKLMSQFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEK 480
           PPNIILVHGEANEMGRLKQKL+SQF+DRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEK
Sbjct: 421 PPNIILVHGEANEMGRLKQKLISQFSDRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEK 480

Query: 481 TPEVGETVSGLLVKKGFAYQIMAPEDLHIFSQLSTANINQRITIPYSNAFNVIVRRLKQV 540
           TPEVGETVSGLLVKKGFA+QIMAP+DLHIFSQLSTANINQRITIPYSNAFNVIVRRLKQV
Sbjct: 481 TPEVGETVSGLLVKKGFAHQIMAPDDLHIFSQLSTANINQRITIPYSNAFNVIVRRLKQV 540

Query: 541 YESVESSTDDESGVPMIRVHDRVTVKQESEKHVSLHWTSDPLSDMVSDSVVALILNINRE 600
           YESVESSTD+ESGVP IRVHDRVTVK ESE+H+SLHWTSDPLSDMVSDSVVALILNINRE
Sbjct: 541 YESVESSTDEESGVPTIRVHDRVTVKHESERHISLHWTSDPLSDMVSDSVVALILNINRE 600

Query: 601 VPKVIVESEAVKTEEENMKKAEKVIHALLVSLFGDVKLGENGKLVINVDGNIAEVDKQSG 660
           VPKVIVESEAVKTEEEN KKAEKVIHALLVSLFG+VKLG NGKLVINVDG+IAE+DKQSG
Sbjct: 601 VPKVIVESEAVKTEEENEKKAEKVIHALLVSLFGNVKLGGNGKLVINVDGSIAELDKQSG 660

Query: 661 EVESENEALKERVKTAFQRIQCAVNPIPLSS 692
           EVESENE LKERVKTAF+RIQCAV PIP S+
Sbjct: 661 EVESENEVLKERVKTAFRRIQCAVKPIPPSA 691

[Close]

BLAST of IVF0012488 vs. NCBI nr
Match: XP_011655552.2 (cleavage and polyadenylation specificity factor subunit 3-I-like [Cucumis sativus])

HSP 1 Score: 1360 bits (3519), Expect = 0.0
Identity = 686/693 (98.99%), Postives = 692/693 (99.86%), Query Frame = 0


Query: 1   MATVGQPPSLKKREASSTREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYS 60
           MA+VGQPPSLKKR+ASSTREEDQLIITPLGAGNEVGRSCVYMSYK KIVLFDCGIHPAYS
Sbjct: 1   MASVGQPPSLKKRDASSTREEDQLIITPLGAGNEVGRSCVYMSYKSKIVLFDCGIHPAYS 60

Query: 61  GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS 120
           GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS
Sbjct: 61  GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS 120

Query: 121 DFVKVSKVSVEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD 180
           DFVKVSKVSVEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD
Sbjct: 121 DFVKVSKVSVEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD 180

Query: 181 IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS 240
           IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS
Sbjct: 181 IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS 240

Query: 241 TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNIPIYYASPLAKRCLTVYETYTLS 300
           TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNIPIYYASPLAKRCLTVYETYTLS
Sbjct: 241 TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNIPIYYASPLAKRCLTVYETYTLS 300

Query: 301 MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKN 360
           MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKN
Sbjct: 301 MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKN 360

Query: 361 SCVIPGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADFAQTSAFLEELM 420
           SCV+PGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADFAQTSAFLEELM
Sbjct: 361 SCVLPGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADFAQTSAFLEELM 420

Query: 421 PPNIILVHGEANEMGRLKQKLMSQFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEK 480
           PPNIILVHGEANEMGRLKQKLMSQFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEK
Sbjct: 421 PPNIILVHGEANEMGRLKQKLMSQFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEK 480

Query: 481 TPEVGETVSGLLVKKGFAYQIMAPEDLHIFSQLSTANINQRITIPYSNAFNVIVRRLKQV 540
           TP+VGETVSGLLVKKGFAYQIMAPEDLHIFSQLSTANINQRITIPYSNAFNVIVRRLKQV
Sbjct: 481 TPDVGETVSGLLVKKGFAYQIMAPEDLHIFSQLSTANINQRITIPYSNAFNVIVRRLKQV 540

Query: 541 YESVESSTDDESGVPMIRVHDRVTVKQESEKHVSLHWTSDPLSDMVSDSVVALILNINRE 600
           YESVESSTDDESGVPMIRVHDRVTVKQESEKHVSLHWTSDPLSDMVSDSVVALILNINRE
Sbjct: 541 YESVESSTDDESGVPMIRVHDRVTVKQESEKHVSLHWTSDPLSDMVSDSVVALILNINRE 600

Query: 601 VPKVIVESEAVKTEEENMKKAEKVIHALLVSLFGDVKLGENGKLVINVDGNIAEVDKQSG 660
           VPKVIVESEAVKTEEEN+KKAEKVIHALLVSLFGDVKLGENGKLVINVDGNIAEVDKQSG
Sbjct: 601 VPKVIVESEAVKTEEENVKKAEKVIHALLVSLFGDVKLGENGKLVINVDGNIAEVDKQSG 660

Query: 661 EVESENEALKERVKTAFQRIQCAVNPIPLSSSS 693
           EVES+NEALKERVKTAFQRIQCAVNPIPLSSSS
Sbjct: 661 EVESDNEALKERVKTAFQRIQCAVNPIPLSSSS 693

[Close]

BLAST of IVF0012488 vs. NCBI nr
Match: XP_011655548.2 (cleavage and polyadenylation specificity factor subunit 3-I isoform X1 [Cucumis sativus] >XP_031741341.1 cleavage and polyadenylation specificity factor subunit 3-I isoform X1 [Cucumis sativus])

HSP 1 Score: 1354 bits (3504), Expect = 0.0
Identity = 683/693 (98.56%), Postives = 691/693 (99.71%), Query Frame = 0


Query: 1   MATVGQPPSLKKREASSTREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYS 60
           MA++GQPPSLKKR+ASSTREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYS
Sbjct: 1   MASLGQPPSLKKRDASSTREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYS 60

Query: 61  GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS 120
           GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLL 
Sbjct: 61  GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLL 120

Query: 121 DFVKVSKVSVEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD 180
           DFVKVSKVSVEDMLYDEQDI+RSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD
Sbjct: 121 DFVKVSKVSVEDMLYDEQDISRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD 180

Query: 181 IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS 240
           IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS
Sbjct: 181 IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS 240

Query: 241 TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNIPIYYASPLAKRCLTVYETYTLS 300
           TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNIPIYYASPLAKRCLTVYETYTLS
Sbjct: 241 TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNIPIYYASPLAKRCLTVYETYTLS 300

Query: 301 MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKN 360
           MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASP GLQSGLSRQLF+MWCSDKKN
Sbjct: 301 MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPSGLQSGLSRQLFEMWCSDKKN 360

Query: 361 SCVIPGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADFAQTSAFLEELM 420
           SCV+PGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADFAQTSAFLEELM
Sbjct: 361 SCVLPGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADFAQTSAFLEELM 420

Query: 421 PPNIILVHGEANEMGRLKQKLMSQFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEK 480
           PPNIILVHGEANEMGRLKQKLMSQFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEK
Sbjct: 421 PPNIILVHGEANEMGRLKQKLMSQFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEK 480

Query: 481 TPEVGETVSGLLVKKGFAYQIMAPEDLHIFSQLSTANINQRITIPYSNAFNVIVRRLKQV 540
           TP+VGETVSGLLVKKGFAYQIMAPEDLHIFSQLSTANINQRITIPYSNAFNVIVRRLKQV
Sbjct: 481 TPDVGETVSGLLVKKGFAYQIMAPEDLHIFSQLSTANINQRITIPYSNAFNVIVRRLKQV 540

Query: 541 YESVESSTDDESGVPMIRVHDRVTVKQESEKHVSLHWTSDPLSDMVSDSVVALILNINRE 600
           YESVESSTDDESGVPMIRVHDRVTVKQESEKHVSLHWTSDPLSDMVSDSVVALILNINRE
Sbjct: 541 YESVESSTDDESGVPMIRVHDRVTVKQESEKHVSLHWTSDPLSDMVSDSVVALILNINRE 600

Query: 601 VPKVIVESEAVKTEEENMKKAEKVIHALLVSLFGDVKLGENGKLVINVDGNIAEVDKQSG 660
           VPKVIVESEAVKTEEEN+KKAEKVIHALLVSLFGDVKLGENGKLVINVDGNIAEVDKQSG
Sbjct: 601 VPKVIVESEAVKTEEENVKKAEKVIHALLVSLFGDVKLGENGKLVINVDGNIAEVDKQSG 660

Query: 661 EVESENEALKERVKTAFQRIQCAVNPIPLSSSS 693
           EVESENEALKERVKTAFQRIQCAVNPIPLSSSS
Sbjct: 661 EVESENEALKERVKTAFQRIQCAVNPIPLSSSS 693

[Close]

BLAST of IVF0012488 vs. NCBI nr
Match: KAE8648659.1 (hypothetical protein Csa_008127 [Cucumis sativus])

HSP 1 Score: 1353 bits (3501), Expect = 0.0
Identity = 683/693 (98.56%), Postives = 690/693 (99.57%), Query Frame = 0


Query: 1   MATVGQPPSLKKREASSTREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYS 60
           MA+VGQPPSLKKR+ASSTREEDQLIITPLGAGNEVGRSCVYMSYK KIVLFDCGIHPAYS
Sbjct: 1   MASVGQPPSLKKRDASSTREEDQLIITPLGAGNEVGRSCVYMSYKSKIVLFDCGIHPAYS 60

Query: 61  GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS 120
           GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLL 
Sbjct: 61  GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLL 120

Query: 121 DFVKVSKVSVEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD 180
           DFVKVSKVSVEDMLYDEQDI+RSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD
Sbjct: 121 DFVKVSKVSVEDMLYDEQDISRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD 180

Query: 181 IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS 240
           IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS
Sbjct: 181 IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS 240

Query: 241 TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNIPIYYASPLAKRCLTVYETYTLS 300
           TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNIPIYYASPLAKRCLTVYETYTLS
Sbjct: 241 TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNIPIYYASPLAKRCLTVYETYTLS 300

Query: 301 MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKN 360
           MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASP GLQSGLSRQLF+MWCSDKKN
Sbjct: 301 MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPSGLQSGLSRQLFEMWCSDKKN 360

Query: 361 SCVIPGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADFAQTSAFLEELM 420
           SCV+PGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADFAQTSAFLEELM
Sbjct: 361 SCVLPGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADFAQTSAFLEELM 420

Query: 421 PPNIILVHGEANEMGRLKQKLMSQFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEK 480
           PPNIILVHGEANEMGRLKQKLMSQFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEK
Sbjct: 421 PPNIILVHGEANEMGRLKQKLMSQFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEK 480

Query: 481 TPEVGETVSGLLVKKGFAYQIMAPEDLHIFSQLSTANINQRITIPYSNAFNVIVRRLKQV 540
           TP+VGETVSGLLVKKGFAYQIMAPEDLHIFSQLSTANINQRITIPYSNAFNVIVRRLKQV
Sbjct: 481 TPDVGETVSGLLVKKGFAYQIMAPEDLHIFSQLSTANINQRITIPYSNAFNVIVRRLKQV 540

Query: 541 YESVESSTDDESGVPMIRVHDRVTVKQESEKHVSLHWTSDPLSDMVSDSVVALILNINRE 600
           YESVESSTDDESGVPMIRVHDRVTVKQESEKHVSLHWTSDPLSDMVSDSVVALILNINRE
Sbjct: 541 YESVESSTDDESGVPMIRVHDRVTVKQESEKHVSLHWTSDPLSDMVSDSVVALILNINRE 600

Query: 601 VPKVIVESEAVKTEEENMKKAEKVIHALLVSLFGDVKLGENGKLVINVDGNIAEVDKQSG 660
           VPKVIVESEAVKTEEEN+KKAEKVIHALLVSLFGDVKLGENGKLVINVDGNIAEVDKQSG
Sbjct: 601 VPKVIVESEAVKTEEENVKKAEKVIHALLVSLFGDVKLGENGKLVINVDGNIAEVDKQSG 660

Query: 661 EVESENEALKERVKTAFQRIQCAVNPIPLSSSS 693
           EVESENEALKERVKTAFQRIQCAVNPIPLSSSS
Sbjct: 661 EVESENEALKERVKTAFQRIQCAVNPIPLSSSS 693

[Close]

BLAST of IVF0012488 vs. NCBI nr
Match: XP_038877886.1 (cleavage and polyadenylation specificity factor subunit 3-I [Benincasa hispida])

HSP 1 Score: 1344 bits (3478), Expect = 0.0
Identity = 678/692 (97.98%), Postives = 686/692 (99.13%), Query Frame = 0


Query: 1   MATVGQPPSLKKREASSTREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYS 60
           MA+VGQPPSLKKREAS+TREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYS
Sbjct: 1   MASVGQPPSLKKREASATREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYS 60

Query: 61  GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS 120
           GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS
Sbjct: 61  GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS 120

Query: 121 DFVKVSKVSVEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD 180
           DFVKVSKVSVEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD
Sbjct: 121 DFVKVSKVSVEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD 180

Query: 181 IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS 240
           IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS
Sbjct: 181 IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS 240

Query: 241 TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNIPIYYASPLAKRCLTVYETYTLS 300
           TISQGGRVLIP FALGRAQELLLILDEYWANHPELHNIPIYYASPLAKRCLTVYETYTLS
Sbjct: 241 TISQGGRVLIPVFALGRAQELLLILDEYWANHPELHNIPIYYASPLAKRCLTVYETYTLS 300

Query: 301 MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKN 360
           MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFD+WCSDKKN
Sbjct: 301 MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDIWCSDKKN 360

Query: 361 SCVIPGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADFAQTSAFLEELM 420
           SCV+PGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADFAQTSAFLEELM
Sbjct: 361 SCVLPGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADFAQTSAFLEELM 420

Query: 421 PPNIILVHGEANEMGRLKQKLMSQFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEK 480
           PPNIILVHGEANEMGRLKQKLMSQFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEK
Sbjct: 421 PPNIILVHGEANEMGRLKQKLMSQFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEK 480

Query: 481 TPEVGETVSGLLVKKGFAYQIMAPEDLHIFSQLSTANINQRITIPYSNAFNVIVRRLKQV 540
           TPEVGETVSGLLVKKGFAYQIMAPEDLHIFSQLSTANINQRITIPYSNAFNVIVRRLKQV
Sbjct: 481 TPEVGETVSGLLVKKGFAYQIMAPEDLHIFSQLSTANINQRITIPYSNAFNVIVRRLKQV 540

Query: 541 YESVESSTDDESGVPMIRVHDRVTVKQESEKHVSLHWTSDPLSDMVSDSVVALILNINRE 600
           YESVESSTD+ES VPMIRVHDRVTVK ESE+HVSLHW SDPLSDMVSDSVVALILNINRE
Sbjct: 541 YESVESSTDEESEVPMIRVHDRVTVKHESERHVSLHWISDPLSDMVSDSVVALILNINRE 600

Query: 601 VPKVIVESEAVKTEEENMKKAEKVIHALLVSLFGDVKLGENGKLVINVDGNIAEVDKQSG 660
           VPKVIVESEAVKTEEEN KKAEKVIHALLVSLFGDVKLGENGKLVINVDGNIAE+DKQSG
Sbjct: 601 VPKVIVESEAVKTEEENNKKAEKVIHALLVSLFGDVKLGENGKLVINVDGNIAELDKQSG 660

Query: 661 EVESENEALKERVKTAFQRIQCAVNPIPLSSS 692
           EVESENEALKERVKTAFQRIQCAV PIPLS+S
Sbjct: 661 EVESENEALKERVKTAFQRIQCAVKPIPLSAS 692

[Close]

BLAST of IVF0012488 vs. NCBI nr
Match: KAA0034167.1 (cleavage and polyadenylation specificity factor subunit 3-I-like [Cucumis melo var. makuwa] >KAA0034170.1 cleavage and polyadenylation specificity factor subunit 3-I-like [Cucumis melo var. makuwa] >TYK15749.1 cleavage and polyadenylation specificity factor subunit 3-I-like [Cucumis melo var. makuwa] >TYK15752.1 cleavage and polyadenylation specificity factor subunit 3-I-like [Cucumis melo var. makuwa])

HSP 1 Score: 1326 bits (3432), Expect = 0.0
Identity = 677/693 (97.69%), Postives = 677/693 (97.69%), Query Frame = 0


Query: 1   MATVGQPPSLKKREASSTREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYS 60
           MATVGQPPSLKKREASSTREEDQLIITPLGAGNE                FDCGIHPAYS
Sbjct: 1   MATVGQPPSLKKREASSTREEDQLIITPLGAGNE----------------FDCGIHPAYS 60

Query: 61  GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS 120
           GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS
Sbjct: 61  GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS 120

Query: 121 DFVKVSKVSVEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD 180
           DFVKVSKVSVEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD
Sbjct: 121 DFVKVSKVSVEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD 180

Query: 181 IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS 240
           IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS
Sbjct: 181 IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS 240

Query: 241 TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNIPIYYASPLAKRCLTVYETYTLS 300
           TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNIPIYYASPLAKRCLTVYETYTLS
Sbjct: 241 TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNIPIYYASPLAKRCLTVYETYTLS 300

Query: 301 MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKN 360
           MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKN
Sbjct: 301 MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKN 360

Query: 361 SCVIPGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADFAQTSAFLEELM 420
           SCVIPGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADFAQTSAFLEELM
Sbjct: 361 SCVIPGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADFAQTSAFLEELM 420

Query: 421 PPNIILVHGEANEMGRLKQKLMSQFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEK 480
           PPNIILVHGEANEMGRLKQKLMSQFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEK
Sbjct: 421 PPNIILVHGEANEMGRLKQKLMSQFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEK 480

Query: 481 TPEVGETVSGLLVKKGFAYQIMAPEDLHIFSQLSTANINQRITIPYSNAFNVIVRRLKQV 540
           TPEVGETVSGLLVKKGFAYQIMAPEDLHIFSQLSTANINQRITIPYSNAFNVIVRRLKQV
Sbjct: 481 TPEVGETVSGLLVKKGFAYQIMAPEDLHIFSQLSTANINQRITIPYSNAFNVIVRRLKQV 540

Query: 541 YESVESSTDDESGVPMIRVHDRVTVKQESEKHVSLHWTSDPLSDMVSDSVVALILNINRE 600
           YESVESSTDDESGVPMIRVHDRVTVKQESEKHVSLHWTSDPLSDMVSDSVVALILNINRE
Sbjct: 541 YESVESSTDDESGVPMIRVHDRVTVKQESEKHVSLHWTSDPLSDMVSDSVVALILNINRE 600

Query: 601 VPKVIVESEAVKTEEENMKKAEKVIHALLVSLFGDVKLGENGKLVINVDGNIAEVDKQSG 660
           VPKVIVESEAVKTEEENMKKAEKVIHALLVSLFGDVKLGENGKLVINVDGNIAEVDKQSG
Sbjct: 601 VPKVIVESEAVKTEEENMKKAEKVIHALLVSLFGDVKLGENGKLVINVDGNIAEVDKQSG 660

Query: 661 EVESENEALKERVKTAFQRIQCAVNPIPLSSSS 693
           EVESENEALKERVKTAFQRIQCAVNPIPLSSSS
Sbjct: 661 EVESENEALKERVKTAFQRIQCAVNPIPLSSSS 677

[Close]

BLAST of IVF0012488 vs. TAIR 10
Match: AT1G61010.1 (cleavage and polyadenylation specificity factor 73-I )

HSP 1 Score: 1160.2 bits (3000), Expect = 0.0e+00
Identity = 564/687 (82.10%), Postives = 643/687 (93.60%), Query Frame = 0


Query: 9   SLKKREASSTREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYSGMAALPYF 68
           SLK+RE   +R+ DQLI+TPLGAG+EVGRSCVYMS++GK +LFDCGIHPAYSGMAALPYF
Sbjct: 7   SLKRREQPISRDGDQLIVTPLGAGSEVGRSCVYMSFRGKNILFDCGIHPAYSGMAALPYF 66

Query: 69  DEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLSDFVKVSKV 128
           DEIDPS+IDVLLITHFH+DHAASLPYFLEKTTF GRVFMT+ATKAIYKLLL+D+VKVSKV
Sbjct: 67  DEIDPSSIDVLLITHFHIDHAASLPYFLEKTTFNGRVFMTHATKAIYKLLLTDYVKVSKV 126

Query: 129 SVEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVDIAGVRVLY 188
           SVEDML+DEQDIN+SMDKIEVIDFHQTVEVNGI+FWCYTAGHVLGAAMFMVDIAGVR+LY
Sbjct: 127 SVEDMLFDEQDINKSMDKIEVIDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAGVRILY 186

Query: 189 TGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHSTISQGGRV 248
           TGDYSREEDRHLRAAE+PQFSPD+CIIEST GVQLHQ RHIREKRFTDV+HST++QGGRV
Sbjct: 187 TGDYSREEDRHLRAAELPQFSPDICIIESTSGVQLHQSRHIREKRFTDVIHSTVAQGGRV 246

Query: 249 LIPAFALGRAQELLLILDEYWANHPELHNIPIYYASPLAKRCLTVYETYTLSMNDRIQN- 308
           LIPAFALGRAQELLLILDEYWANHP+LHNIPIYYASPLAK+C+ VY+TY LSMNDRI+N 
Sbjct: 247 LIPAFALGRAQELLLILDEYWANHPDLHNIPIYYASPLAKKCMAVYQTYILSMNDRIRNQ 306

Query: 309 -AKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKNSCVIPG 368
            A SNPF FK+ISPL SI+ F DVGPSVVMA+PGGLQSGLSRQLFD WCSDKKN+C+IPG
Sbjct: 307 FANSNPFVFKHISPLNSIDDFNDVGPSVVMATPGGLQSGLSRQLFDSWCSDKKNACIIPG 366

Query: 369 YVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADFAQTSAFLEELMPPNIIL 428
           Y+VEGTLAKTIINEPKEVTLM+GL APLNMQVHYISFSAHAD+AQTS FL+ELMPPNIIL
Sbjct: 367 YMVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHADYAQTSTFLKELMPPNIIL 426

Query: 429 VHGEANEMGRLKQKLMSQFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEKTPEVGE 488
           VHGEANEM RLKQKL+++F D NTKI+TPKNC+SVEMYFNS+K+AKTIG+LAEKTP+VG+
Sbjct: 427 VHGEANEMMRLKQKLLTEFPDGNTKIMTPKNCESVEMYFNSEKLAKTIGRLAEKTPDVGD 486

Query: 489 TVSGLLVKKGFAYQIMAPEDLHIFSQLSTANINQRITIPYSNAFNVIVRRLKQVYESVES 548
           TVSG+LVKKGF YQIMAP++LH+FSQLSTA + QRITIP+  AF VI  RL++++ESVE 
Sbjct: 487 TVSGILVKKGFTYQIMAPDELHVFSQLSTATVTQRITIPFVGAFGVIKHRLEKIFESVEF 546

Query: 549 STDDESGVPMIRVHDRVTVKQESEKHVSLHWTSDPLSDMVSDSVVALILNINREVPKVIV 608
           STD+ESG+P ++VH+RVTVKQESEKH+SL W+SDP+SDMVSDS+VALILNI+REVPK+++
Sbjct: 547 STDEESGLPALKVHERVTVKQESEKHISLQWSSDPISDMVSDSIVALILNISREVPKIVM 606

Query: 609 ESE-AVKTEEENMKKAEKVIHALLVSLFGDVKLGENGKLVINVDGNIAEVDKQSGEVESE 668
           E E AVK+EEEN KK EKVI+ALLVSLFGDVKLGENGKLVI VDGN+A++DK+SGEVESE
Sbjct: 607 EEEDAVKSEEENGKKVEKVIYALLVSLFGDVKLGENGKLVIRVDGNVAQLDKESGEVESE 666

Query: 669 NEALKERVKTAFQRIQCAVNPIPLSSS 693
           +  LKERV+ AF+RIQ AV PIPLS+S
Sbjct: 667 HSGLKERVRVAFERIQSAVKPIPLSAS 693

[Close]

BLAST of IVF0012488 vs. TAIR 10
Match: AT1G61010.2 (cleavage and polyadenylation specificity factor 73-I )

HSP 1 Score: 1160.2 bits (3000), Expect = 0.0e+00
Identity = 564/687 (82.10%), Postives = 643/687 (93.60%), Query Frame = 0


Query: 9   SLKKREASSTREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYSGMAALPYF 68
           SLK+RE   +R+ DQLI+TPLGAG+EVGRSCVYMS++GK +LFDCGIHPAYSGMAALPYF
Sbjct: 7   SLKRREQPISRDGDQLIVTPLGAGSEVGRSCVYMSFRGKNILFDCGIHPAYSGMAALPYF 66

Query: 69  DEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLSDFVKVSKV 128
           DEIDPS+IDVLLITHFH+DHAASLPYFLEKTTF GRVFMT+ATKAIYKLLL+D+VKVSKV
Sbjct: 67  DEIDPSSIDVLLITHFHIDHAASLPYFLEKTTFNGRVFMTHATKAIYKLLLTDYVKVSKV 126

Query: 129 SVEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVDIAGVRVLY 188
           SVEDML+DEQDIN+SMDKIEVIDFHQTVEVNGI+FWCYTAGHVLGAAMFMVDIAGVR+LY
Sbjct: 127 SVEDMLFDEQDINKSMDKIEVIDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAGVRILY 186

Query: 189 TGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHSTISQGGRV 248
           TGDYSREEDRHLRAAE+PQFSPD+CIIEST GVQLHQ RHIREKRFTDV+HST++QGGRV
Sbjct: 187 TGDYSREEDRHLRAAELPQFSPDICIIESTSGVQLHQSRHIREKRFTDVIHSTVAQGGRV 246

Query: 249 LIPAFALGRAQELLLILDEYWANHPELHNIPIYYASPLAKRCLTVYETYTLSMNDRIQN- 308
           LIPAFALGRAQELLLILDEYWANHP+LHNIPIYYASPLAK+C+ VY+TY LSMNDRI+N 
Sbjct: 247 LIPAFALGRAQELLLILDEYWANHPDLHNIPIYYASPLAKKCMAVYQTYILSMNDRIRNQ 306

Query: 309 -AKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKNSCVIPG 368
            A SNPF FK+ISPL SI+ F DVGPSVVMA+PGGLQSGLSRQLFD WCSDKKN+C+IPG
Sbjct: 307 FANSNPFVFKHISPLNSIDDFNDVGPSVVMATPGGLQSGLSRQLFDSWCSDKKNACIIPG 366

Query: 369 YVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADFAQTSAFLEELMPPNIIL 428
           Y+VEGTLAKTIINEPKEVTLM+GL APLNMQVHYISFSAHAD+AQTS FL+ELMPPNIIL
Sbjct: 367 YMVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHADYAQTSTFLKELMPPNIIL 426

Query: 429 VHGEANEMGRLKQKLMSQFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEKTPEVGE 488
           VHGEANEM RLKQKL+++F D NTKI+TPKNC+SVEMYFNS+K+AKTIG+LAEKTP+VG+
Sbjct: 427 VHGEANEMMRLKQKLLTEFPDGNTKIMTPKNCESVEMYFNSEKLAKTIGRLAEKTPDVGD 486

Query: 489 TVSGLLVKKGFAYQIMAPEDLHIFSQLSTANINQRITIPYSNAFNVIVRRLKQVYESVES 548
           TVSG+LVKKGF YQIMAP++LH+FSQLSTA + QRITIP+  AF VI  RL++++ESVE 
Sbjct: 487 TVSGILVKKGFTYQIMAPDELHVFSQLSTATVTQRITIPFVGAFGVIKHRLEKIFESVEF 546

Query: 549 STDDESGVPMIRVHDRVTVKQESEKHVSLHWTSDPLSDMVSDSVVALILNINREVPKVIV 608
           STD+ESG+P ++VH+RVTVKQESEKH+SL W+SDP+SDMVSDS+VALILNI+REVPK+++
Sbjct: 547 STDEESGLPALKVHERVTVKQESEKHISLQWSSDPISDMVSDSIVALILNISREVPKIVM 606

Query: 609 ESE-AVKTEEENMKKAEKVIHALLVSLFGDVKLGENGKLVINVDGNIAEVDKQSGEVESE 668
           E E AVK+EEEN KK EKVI+ALLVSLFGDVKLGENGKLVI VDGN+A++DK+SGEVESE
Sbjct: 607 EEEDAVKSEEENGKKVEKVIYALLVSLFGDVKLGENGKLVIRVDGNVAQLDKESGEVESE 666

Query: 669 NEALKERVKTAFQRIQCAVNPIPLSSS 693
           +  LKERV+ AF+RIQ AV PIPLS+S
Sbjct: 667 HSGLKERVRVAFERIQSAVKPIPLSAS 693

[Close]

BLAST of IVF0012488 vs. TAIR 10
Match: AT1G61010.3 (cleavage and polyadenylation specificity factor 73-I )

HSP 1 Score: 1160.2 bits (3000), Expect = 0.0e+00
Identity = 564/687 (82.10%), Postives = 643/687 (93.60%), Query Frame = 0


Query: 9   SLKKREASSTREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYSGMAALPYF 68
           SLK+RE   +R+ DQLI+TPLGAG+EVGRSCVYMS++GK +LFDCGIHPAYSGMAALPYF
Sbjct: 7   SLKRREQPISRDGDQLIVTPLGAGSEVGRSCVYMSFRGKNILFDCGIHPAYSGMAALPYF 66

Query: 69  DEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLSDFVKVSKV 128
           DEIDPS+IDVLLITHFH+DHAASLPYFLEKTTF GRVFMT+ATKAIYKLLL+D+VKVSKV
Sbjct: 67  DEIDPSSIDVLLITHFHIDHAASLPYFLEKTTFNGRVFMTHATKAIYKLLLTDYVKVSKV 126

Query: 129 SVEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVDIAGVRVLY 188
           SVEDML+DEQDIN+SMDKIEVIDFHQTVEVNGI+FWCYTAGHVLGAAMFMVDIAGVR+LY
Sbjct: 127 SVEDMLFDEQDINKSMDKIEVIDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAGVRILY 186

Query: 189 TGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHSTISQGGRV 248
           TGDYSREEDRHLRAAE+PQFSPD+CIIEST GVQLHQ RHIREKRFTDV+HST++QGGRV
Sbjct: 187 TGDYSREEDRHLRAAELPQFSPDICIIESTSGVQLHQSRHIREKRFTDVIHSTVAQGGRV 246

Query: 249 LIPAFALGRAQELLLILDEYWANHPELHNIPIYYASPLAKRCLTVYETYTLSMNDRIQN- 308
           LIPAFALGRAQELLLILDEYWANHP+LHNIPIYYASPLAK+C+ VY+TY LSMNDRI+N 
Sbjct: 247 LIPAFALGRAQELLLILDEYWANHPDLHNIPIYYASPLAKKCMAVYQTYILSMNDRIRNQ 306

Query: 309 -AKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKNSCVIPG 368
            A SNPF FK+ISPL SI+ F DVGPSVVMA+PGGLQSGLSRQLFD WCSDKKN+C+IPG
Sbjct: 307 FANSNPFVFKHISPLNSIDDFNDVGPSVVMATPGGLQSGLSRQLFDSWCSDKKNACIIPG 366

Query: 369 YVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADFAQTSAFLEELMPPNIIL 428
           Y+VEGTLAKTIINEPKEVTLM+GL APLNMQVHYISFSAHAD+AQTS FL+ELMPPNIIL
Sbjct: 367 YMVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHADYAQTSTFLKELMPPNIIL 426

Query: 429 VHGEANEMGRLKQKLMSQFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEKTPEVGE 488
           VHGEANEM RLKQKL+++F D NTKI+TPKNC+SVEMYFNS+K+AKTIG+LAEKTP+VG+
Sbjct: 427 VHGEANEMMRLKQKLLTEFPDGNTKIMTPKNCESVEMYFNSEKLAKTIGRLAEKTPDVGD 486

Query: 489 TVSGLLVKKGFAYQIMAPEDLHIFSQLSTANINQRITIPYSNAFNVIVRRLKQVYESVES 548
           TVSG+LVKKGF YQIMAP++LH+FSQLSTA + QRITIP+  AF VI  RL++++ESVE 
Sbjct: 487 TVSGILVKKGFTYQIMAPDELHVFSQLSTATVTQRITIPFVGAFGVIKHRLEKIFESVEF 546

Query: 549 STDDESGVPMIRVHDRVTVKQESEKHVSLHWTSDPLSDMVSDSVVALILNINREVPKVIV 608
           STD+ESG+P ++VH+RVTVKQESEKH+SL W+SDP+SDMVSDS+VALILNI+REVPK+++
Sbjct: 547 STDEESGLPALKVHERVTVKQESEKHISLQWSSDPISDMVSDSIVALILNISREVPKIVM 606

Query: 609 ESE-AVKTEEENMKKAEKVIHALLVSLFGDVKLGENGKLVINVDGNIAEVDKQSGEVESE 668
           E E AVK+EEEN KK EKVI+ALLVSLFGDVKLGENGKLVI VDGN+A++DK+SGEVESE
Sbjct: 607 EEEDAVKSEEENGKKVEKVIYALLVSLFGDVKLGENGKLVIRVDGNVAQLDKESGEVESE 666

Query: 669 NEALKERVKTAFQRIQCAVNPIPLSSS 693
           +  LKERV+ AF+RIQ AV PIPLS+S
Sbjct: 667 HSGLKERVRVAFERIQSAVKPIPLSAS 693

[Close]

BLAST of IVF0012488 vs. TAIR 10
Match: AT2G01730.1 (cleavage and polyadenylation specificity factor 73 kDa subunit-II )

HSP 1 Score: 285.0 bits (728), Expect = 1.6e-76
Identity = 160/428 (37.38%), Postives = 235/428 (54.91%), Query Frame = 0


Query: 29  LGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYSGMAALPYFDEIDPS-----TIDVLLITH 88
           LGAG E+G+SCV ++  GK ++FDCG+H         P F  I  S      I  ++ITH
Sbjct: 8   LGAGQEIGKSCVVVTINGKKIMFDCGMHMGCDDHNRYPNFSLISKSGDFDNAISCIIITH 67

Query: 89  FHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLSDFVKVS-KVSVEDMLYDEQDINR 148
           FH+DH  +LPYF E   + G ++M+Y TKA+  L+L D+ +V      E+ L+    I  
Sbjct: 68  FHMDHVGALPYFTEVCGYNGPIYMSYPTKALSPLMLEDYRRVMVDRRGEEELFTTTHIAN 127

Query: 149 SMDKIEVIDFHQTVEVN-GIRFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLR 208
            M K+  ID  QT++V+  ++   Y AGHVLGA M    +    ++YTGDY+   DRHL 
Sbjct: 128 CMKKVIAIDLKQTIQVDEDLQIRAYYAGHVLGAVMVYAKMGDAAIVYTGDYNMTTDRHLG 187

Query: 209 AAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHSTISQGGRVLIPAFALGRAQEL 268
           AA++ +   D+ I ESTY   +   ++ RE+ F   VH  ++ GG+ LIP+FALGRAQEL
Sbjct: 188 AAKIDRLQLDLLISESTYATTIRGSKYPREREFLQAVHKCVAGGGKALIPSFALGRAQEL 247

Query: 269 LLILDEYWANHPELHNI--PIYYASPLAKRCLTVYETYT--LSMNDRIQNAKSNPFRFKY 328
            ++LD+YW    E  NI  PIY++S L  +    Y+      S N + ++   NPF FK 
Sbjct: 248 CMLLDDYW----ERMNIKVPIYFSSGLTIQANMYYKMLISWTSQNVKEKHNTHNPFDFKN 307

Query: 329 ISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKNSCVIPGYVVEGTLA-KT 388
           +       +    GP V+ A+PG L +G S ++F  W     N   +PGY V GT+  K 
Sbjct: 308 VKDFDR-SLIHAPGPCVLFATPGMLCAGFSLEVFKHWAPSPLNLVALPGYSVAGTVGHKL 367

Query: 389 IINEPKEVTLMSGLMAPLNMQVHYISFSAHADFAQTSAFLEELMPPNIILVHGEANEMGR 445
           +  +P  V L +G    +  +VH ++FS H D        + L P N++LVHGE   M  
Sbjct: 368 MAGKPTTVDLYNGTKVDVRCKVHQVAFSPHTDAKGIMDLTKFLSPKNVVLVHGEKPSMMI 427

[Close]

BLAST of IVF0012488 vs. TAIR 10
Match: AT5G23880.1 (cleavage and polyadenylation specificity factor 100 )

HSP 1 Score: 139.8 bits (351), Expect = 8.2e-33
Identity = 103/373 (27.61%), Postives = 185/373 (49.60%), Query Frame = 0


Query: 26  ITPL-GAGNEVGRSCVYMSYKGKIVLFDCGIHPAYSGMAALPYFDEIDPSTIDVLLITHF 85
           +TPL G  NE   S + +S  G   L DCG +  +      P       STID +L++H 
Sbjct: 7   VTPLCGVYNENPLSYL-VSIDGFNFLIDCGWNDLFDTSLLEPL--SRVASTIDAVLLSHP 66

Query: 86  HLDHAASLPYFLEKTTFKGRVFMTYATKAIYKL----LLSDFVKVSKVSVEDMLYDEQDI 145
              H  +LPY +++      V   YAT+ +++L    +   F+   +VS  D L+   DI
Sbjct: 67  DTLHIGALPYAMKQLGLSAPV---YATEPVHRLGLLTMYDQFLSRKQVSDFD-LFTLDDI 126

Query: 146 NRSMDKIEVIDFHQTVEVN----GIRFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREE 205
           + +   +  + + Q   ++    GI    + AGH+LG +++ +   G  V+Y  DY+  +
Sbjct: 127 DSAFQNVIRLTYSQNYHLSGKGEGIVIAPHVAGHMLGGSIWRITKDGEDVIYAVDYNHRK 186

Query: 206 DRHLRAAEMPQF-SPDVCIIESTYGVQLHQ-PRHIREKRFTDVVHSTISQGGRVLIPAFA 265
           +RHL    +  F  P V I ++ + +  +Q  R  R+K F D +   +  GG VL+P   
Sbjct: 187 ERHLNGTVLQSFVRPAVLITDAYHALYTNQTARQQRDKEFLDTISKHLEVGGNVLLPVDT 246

Query: 266 LGRAQELLLILDEYWANHPELHNIPIYYASPLAKRCLTVYETYTLSMNDRI----QNAKS 325
            GR  ELLLIL+++W+      + PIY+ + ++   +   +++   M+D I    + ++ 
Sbjct: 247 AGRVLELLLILEQHWSQRG--FSFPIYFLTYVSSSTIDYVKSFLEWMSDSISKSFETSRD 306

Query: 326 NPFRFKYISPLKSIEVFKDV--GPSVVMASPGGLQSGLSRQLFDMWCSDKKNSCVIPGYV 382
           N F  ++++ L +     +   GP VV+AS   L++G +R++F  W +D +N  +     
Sbjct: 307 NAFLLRHVTLLINKTDLDNAPPGPKVVLASMASLEAGFAREIFVEWANDPRNLVLFTETG 366

The following BLAST results are available for this feature:

BLAST of IVF0012488 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C952	0.0e+00	82.10	Cleavage and polyadenylation specificity factor subunit 3-I OS=Arabidopsis thali...	[more]
P79101	9.6e-204	52.55	Cleavage and polyadenylation specificity factor subunit 3 OS=Bos taurus OX=9913 ...	[more]
Q9UKF6	1.3e-203	52.55	Cleavage and polyadenylation specificity factor subunit 3 OS=Homo sapiens OX=960...	[more]
Q9QXK7	8.1e-203	52.26	Cleavage and polyadenylation specificity factor subunit 3 OS=Mus musculus OX=100...	[more]
Q86A79	2.5e-196	47.68	Cleavage and polyadenylation specificity factor subunit 3 OS=Dictyostelium disco...	[more]

BLAST of IVF0012488 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SY15	0.0e+00	97.69	Cleavage and polyadenylation specificity factor subunit 3-I-like OS=Cucumis melo...	[more]
A0A6J1DE61	0.0e+00	96.39	cleavage and polyadenylation specificity factor subunit 3-I OS=Momordica charant...	[more]
A0A0A0KV82	0.0e+00	96.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G587170 PE=4 SV=1	[more]
A0A6J1G1N4	0.0e+00	95.95	cleavage and polyadenylation specificity factor subunit 3-I-like OS=Cucurbita mo...	[more]
A0A6J1GZU7	0.0e+00	95.22	cleavage and polyadenylation specificity factor subunit 3-I-like OS=Cucurbita mo...	[more]

BLAST of IVF0012488 vs. NCBI nr


Match Name	Identity	Description
XP_011655552.2	98.99	cleavage and polyadenylation specificity factor subunit 3-I-like [Cucumis sativu...	[more]
XP_011655548.2	98.56	cleavage and polyadenylation specificity factor subunit 3-I isoform X1 [Cucumis ...	[more]
KAE8648659.1	98.56	hypothetical protein Csa_008127 [Cucumis sativus]	[more]
XP_038877886.1	97.98	cleavage and polyadenylation specificity factor subunit 3-I [Benincasa hispida]	[more]
KAA0034167.1	97.69	cleavage and polyadenylation specificity factor subunit 3-I-like [Cucumis melo v...	[more]

BLAST of IVF0012488 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G61010.1	0.0e+00	82.10	cleavage and polyadenylation specificity factor 73-I	[more]
AT1G61010.2	0.0e+00	82.10	cleavage and polyadenylation specificity factor 73-I	[more]
AT1G61010.3	0.0e+00	82.10	cleavage and polyadenylation specificity factor 73-I	[more]
AT2G01730.1	1.6e-76	37.38	cleavage and polyadenylation specificity factor 73 kDa subunit-II	[more]
AT5G23880.1	8.2e-33	27.61	cleavage and polyadenylation specificity factor 100	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 652..672
None	No IPR available	GENE3D	3.40.50.10890		coord: 226..405 e-value: 7.3E-152 score: 507.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR11203	CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR FAMILY MEMBER	coord: 7..689
None	No IPR available	PANTHER	PTHR11203:SF48	SUBFAMILY NOT NAMED	coord: 7..689
None	No IPR available	CDD	cd16292	CPSF3-like_MBL-fold	coord: 24..217 e-value: 1.91242E-144 score: 416.986
IPR021718	Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term	SMART	SM01098	CPSF73_100_C_2	coord: 484..687 e-value: 5.4E-44 score: 162.1
IPR021718	Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term	PFAM	PF11718	CPSF73-100_C	coord: 487..686 e-value: 5.7E-46 score: 156.8
IPR001279	Metallo-beta-lactamase	SMART	SM00849	Lactamase_B_5a	coord: 36..224 e-value: 1.9E-13 score: 60.7
IPR001279	Metallo-beta-lactamase	PFAM	PF00753	Lactamase_B	coord: 35..200 e-value: 2.2E-21 score: 76.8
IPR022712	Beta-Casp domain	SMART	SM01027	Beta_Casp_2	coord: 258..377 e-value: 3.4E-37 score: 139.6
IPR022712	Beta-Casp domain	PFAM	PF10996	Beta-Casp	coord: 258..377 e-value: 5.1E-26 score: 91.2
IPR036866	Ribonuclease Z/Hydroxyacylglutathione hydrolase-like	GENE3D	3.60.15.10		coord: 29..434 e-value: 7.3E-152 score: 507.5
IPR036866	Ribonuclease Z/Hydroxyacylglutathione hydrolase-like	SUPERFAMILY	56281	Metallo-hydrolase/oxidoreductase	coord: 22..465
IPR011108	Zn-dependent metallo-hydrolase, RNA specificity domain	PFAM	PF07521	RMMBL	coord: 392..446 e-value: 3.6E-15 score: 55.7

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0012488.1	IVF0012488.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing
cellular_component	GO:0005634	nucleus