IVF0012486 (gene) Melon (IVF77) v1

Overview


Name	IVF0012486
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Unknown protein
Location	chr04: 24666765 .. 24668187 (-)
RNA-Seq Expression	IVF0012486
Synteny	IVF0012486

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCGTCTTTTGGCGCGGTAGTTCATCAATCTGAGGAGTGGAGAAGCAACAGAGCAGAGAAAATTGGTACGTAATATAGATATCGAACCGCATTTTCTCCATCTTTCGAATGCTCCATATTATGATTCATTTGATCTTGTTGTTCTTCATTCATATGCAATCACTTCAAGTTATCCTATAATTTGATCGTCATAGTTTGCTAAACAAACGGCTGATTGAACCAATTGCCCTAAGAATAGAACGATCAACAGTTTGGTATCGATTCTATATGTAACCTGTTGTTTTCGCCATTTTCTTCTCCATTTCAATTTGTACTACTGGAAAATCAAAATTGATTCCGACTTGTGTGATGTCTTCCGGATTATTTTCTTGACGTTCATTTTGAATACGCAAGACGGAAAATATGTTGCTTGCACTATGCTGTCAAGAAGAATTTTAACGTCGATTGATGTGTGTAATCTTACGTTTGAGGATCTTACTGAAACTTCTGAAATTTCAACTTCTTTGTACTTCCATTTCAGAGTGTTACGATTTCTTACTTACTTCTGCCTGTCCGGTTTCAAAATCTGTTCATCCTTTCTCTTGATTTAGCTTTAATCTACTTATTGTCGTTTGAGTATCCCTCTCTTTGTGTGGATCAATGAGTTCTTGCGTATAGATAATTGAGCTCATGCAACCGCAAATCCTTTCAATGATGTTTACTTTTCTATGAAAAACTTCTCACTATGCTACAGTTGATTGTTAGCAACTGCGTATTTGGAATGGAAAGCAATGGAACTGAATTCACTGGCAAACGCCAGAAATTAGCTGTATGTTTACTCATTTTTTCTATGTCGTCATTCTTCATATGCCAAAGTAAAAGAAGATTGGGAAATTCAACAAATTTTCACCTTTCAGGTGGAAGAGCAGGGAAGGGATACAGACATGTCCAACGTTTTAGAAAACGAACAGTGTGAAACAATCATTAAGGGTTCCGAGGAGATGGAATCAAATATCGCTTGCCTACTTGAAAAAATTGAAAGCTTCACACAGCTGGTAGGTGGTTTATACGTTCAATCCTTGTGGGCTGAATATTAGATTAAGTTTTTGTTTGGCTGCAAATGTTGTCTATTTTTCTTCAATGAAGGTGTCTGAACTGCTGGAGTCGGGAAAGACTGCGTTTAAAGAGCTTATTAATGAATTTGAAGAGCGAATTATAGCGTGAGTTGAAATTTTCGATACTTAACCTCAAAAAATATTTGTTGAGGACTATTTTCTCATCTTAATTTTTATCTTTCTTTCTTCCCAGCATTCATAAGGATCACGTTGAAAAATGGCAACATGAGATTAAAGAGCTGCGGTTGATTGATTCATCAAATGAGGAAGTCAGTACTATTTTGTGCAATGCTCGAAATTTACTTCAGAATGGTCATATCCAGTTTTGA

mRNA sequence

CTCGTCTTTTGGCGCGGTAGTTCATCAATCTGAGGAGTGGAGAAGCAACAGAGCAGAGAAAATTGTTGATTGTTAGCAACTGCGTATTTGGAATGGAAAGCAATGGAACTGAATTCACTGGCAAACGCCAGAAATTAGCTGTGGAAGAGCAGGGAAGGGATACAGACATGTCCAACGTTTTAGAAAACGAACAGTGTGAAACAATCATTAAGGGTTCCGAGGAGATGGAATCAAATATCGCTTGCCTACTTGAAAAAATTGAAAGCTTCACACAGCTGGTGTCTGAACTGCTGGAGTCGGGAAAGACTGCGTTTAAAGAGCTTATTAATGAATTTGAAGAGCGAATTATAGCCATTCATAAGGATCACGTTGAAAAATGGCAACATGAGATTAAAGAGCTGCGGTTGATTGATTCATCAAATGAGGAAGTCAGTACTATTTTGTGCAATGCTCGAAATTTACTTCAGAATGGTCATATCCAGTTTTGA

Coding sequence (CDS)

ATGGAAAGCAATGGAACTGAATTCACTGGCAAACGCCAGAAATTAGCTGTGGAAGAGCAGGGAAGGGATACAGACATGTCCAACGTTTTAGAAAACGAACAGTGTGAAACAATCATTAAGGGTTCCGAGGAGATGGAATCAAATATCGCTTGCCTACTTGAAAAAATTGAAAGCTTCACACAGCTGGTGTCTGAACTGCTGGAGTCGGGAAAGACTGCGTTTAAAGAGCTTATTAATGAATTTGAAGAGCGAATTATAGCCATTCATAAGGATCACGTTGAAAAATGGCAACATGAGATTAAAGAGCTGCGGTTGATTGATTCATCAAATGAGGAAGTCAGTACTATTTTGTGCAATGCTCGAAATTTACTTCAGAATGGTCATATCCAGTTTTGA

Protein sequence

MESNGTEFTGKRQKLAVEEQGRDTDMSNVLENEQCETIIKGSEEMESNIACLLEKIESFTQLVSELLESGKTAFKELINEFEERIIAIHKDHVEKWQHEIKELRLIDSSNEEVSTILCNARNLLQNGHIQF

Homology

[Close]

BLAST of IVF0012486 vs. ExPASy TrEMBL
Match: A0A5D3E1L2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold734G00270 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 2.9e-64
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MESNGTEFTGKRQKLAVEEQGRDTDMSNVLENEQCETIIKGSEEMESNIACLLEKIESFT 60
           MESNGTEFTGKRQKLAVEEQGRDTDMSNVLENEQCETIIKGSEEMESNIACLLEKIESFT
Sbjct: 14  MESNGTEFTGKRQKLAVEEQGRDTDMSNVLENEQCETIIKGSEEMESNIACLLEKIESFT 73

Query: 61  QLVSELLESGKTAFKELINEFEERIIAIHKDHVEKWQHEIKELRLIDSSNEEVSTILCNA 120
           QLVSELLESGKTAFKELINEFEERIIAIHKDHVEKWQHEIKELRLIDSSNEEVSTILCNA
Sbjct: 74  QLVSELLESGKTAFKELINEFEERIIAIHKDHVEKWQHEIKELRLIDSSNEEVSTILCNA 133

Query: 121 RNLLQNGHIQF 132
           RNLLQNGHIQF
Sbjct: 134 RNLLQNGHIQF 144

[Close]

BLAST of IVF0012486 vs. ExPASy TrEMBL
Match: A0A1S3CNM9 (uncharacterized protein LOC103502983 OS=Cucumis melo OX=3656 GN=LOC103502983 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 2.9e-64
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MESNGTEFTGKRQKLAVEEQGRDTDMSNVLENEQCETIIKGSEEMESNIACLLEKIESFT 60
           MESNGTEFTGKRQKLAVEEQGRDTDMSNVLENEQCETIIKGSEEMESNIACLLEKIESFT
Sbjct: 1   MESNGTEFTGKRQKLAVEEQGRDTDMSNVLENEQCETIIKGSEEMESNIACLLEKIESFT 60

Query: 61  QLVSELLESGKTAFKELINEFEERIIAIHKDHVEKWQHEIKELRLIDSSNEEVSTILCNA 120
           QLVSELLESGKTAFKELINEFEERIIAIHKDHVEKWQHEIKELRLIDSSNEEVSTILCNA
Sbjct: 61  QLVSELLESGKTAFKELINEFEERIIAIHKDHVEKWQHEIKELRLIDSSNEEVSTILCNA 120

Query: 121 RNLLQNGHIQF 132
           RNLLQNGHIQF
Sbjct: 121 RNLLQNGHIQF 131

[Close]

BLAST of IVF0012486 vs. ExPASy TrEMBL
Match: A0A0A0LI92 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G844890 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 4.5e-57
Identity = 120/131 (91.60%), Postives = 123/131 (93.89%), Query Frame = 0


Query: 1   MESNGTEFTGKRQKLAVEEQGRDTDMSNVLENEQCETIIKGSEEMESNIACLLEKIESFT 60
           MESNGTEF GKR KLAVEEQ  DTDMSN++ENEQCETIIKGSEEMESNIACLLEKIESFT
Sbjct: 1   MESNGTEFNGKRPKLAVEEQVSDTDMSNLVENEQCETIIKGSEEMESNIACLLEKIESFT 60

Query: 61  QLVSELLESGKTAFKELINEFEERIIAIHKDHVEKWQHEIKELRLIDSSNEEVSTILCNA 120
           QLVSELLESGKTAFK+L NEFEERIIAIHKDHVEKWQ EIKELRLIDSSNEE STILCNA
Sbjct: 61  QLVSELLESGKTAFKDLSNEFEERIIAIHKDHVEKWQDEIKELRLIDSSNEEASTILCNA 120

Query: 121 RNLLQNGHIQF 132
           RNLLQNG IQF
Sbjct: 121 RNLLQNGQIQF 131

[Close]

BLAST of IVF0012486 vs. ExPASy TrEMBL
Match: A0A6J1I7S6 (uncharacterized protein LOC111470787 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470787 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 3.6e-54
Identity = 113/131 (86.26%), Postives = 123/131 (93.89%), Query Frame = 0


Query: 1   MESNGTEFTGKRQKLAVEEQGRDTDMSNVLENEQCETIIKGSEEMESNIACLLEKIESFT 60
           MESNGTEFTGKR KLA+ EQG+DT MSN+ ENEQCET I+GSEEMESNIA LLEKIESFT
Sbjct: 1   MESNGTEFTGKRMKLAMGEQGKDTSMSNISENEQCETDIRGSEEMESNIARLLEKIESFT 60

Query: 61  QLVSELLESGKTAFKELINEFEERIIAIHKDHVEKWQHEIKELRLIDSSNEEVSTILCNA 120
           QLVSELLESGKTAFK+L NEFEE+IIAIHK++VE+WQHEIKELRL+DSSNEE STILCNA
Sbjct: 61  QLVSELLESGKTAFKDLSNEFEEQIIAIHKNNVERWQHEIKELRLLDSSNEEASTILCNA 120

Query: 121 RNLLQNGHIQF 132
           RNLLQNGHIQF
Sbjct: 121 RNLLQNGHIQF 131

[Close]

BLAST of IVF0012486 vs. ExPASy TrEMBL
Match: A0A6J1EXU6 (uncharacterized protein LOC111439190 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111439190 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 6.1e-54
Identity = 112/131 (85.50%), Postives = 123/131 (93.89%), Query Frame = 0


Query: 1   MESNGTEFTGKRQKLAVEEQGRDTDMSNVLENEQCETIIKGSEEMESNIACLLEKIESFT 60
           MESNG +FTGKR KLA+EEQG+DT MSN+ ENEQCET I+GSEEMESNIA LLEKIESFT
Sbjct: 1   MESNGIDFTGKRMKLAMEEQGKDTSMSNISENEQCETDIRGSEEMESNIARLLEKIESFT 60

Query: 61  QLVSELLESGKTAFKELINEFEERIIAIHKDHVEKWQHEIKELRLIDSSNEEVSTILCNA 120
           QLVSELLESGKTAFK+L NEFEE+IIAIHK++VE+WQHEIKELRL+DSSNEE STILCNA
Sbjct: 61  QLVSELLESGKTAFKDLSNEFEEQIIAIHKNNVERWQHEIKELRLLDSSNEEASTILCNA 120

Query: 121 RNLLQNGHIQF 132
           RNLLQNGHIQF
Sbjct: 121 RNLLQNGHIQF 131

[Close]

BLAST of IVF0012486 vs. NCBI nr
Match: XP_008465341.1 (PREDICTED: uncharacterized protein LOC103502983 [Cucumis melo])

HSP 1 Score: 254 bits (648), Expect = 6.24e-85
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MESNGTEFTGKRQKLAVEEQGRDTDMSNVLENEQCETIIKGSEEMESNIACLLEKIESFT 60
           MESNGTEFTGKRQKLAVEEQGRDTDMSNVLENEQCETIIKGSEEMESNIACLLEKIESFT
Sbjct: 1   MESNGTEFTGKRQKLAVEEQGRDTDMSNVLENEQCETIIKGSEEMESNIACLLEKIESFT 60

Query: 61  QLVSELLESGKTAFKELINEFEERIIAIHKDHVEKWQHEIKELRLIDSSNEEVSTILCNA 120
           QLVSELLESGKTAFKELINEFEERIIAIHKDHVEKWQHEIKELRLIDSSNEEVSTILCNA
Sbjct: 61  QLVSELLESGKTAFKELINEFEERIIAIHKDHVEKWQHEIKELRLIDSSNEEVSTILCNA 120

Query: 121 RNLLQNGHIQF 131
           RNLLQNGHIQF
Sbjct: 121 RNLLQNGHIQF 131

[Close]

BLAST of IVF0012486 vs. NCBI nr
Match: KAA0051263.1 (uncharacterized protein E6C27_scaffold2143G00210 [Cucumis melo var. makuwa] >TYK29997.1 uncharacterized protein E5676_scaffold734G00270 [Cucumis melo var. makuwa])

HSP 1 Score: 254 bits (648), Expect = 9.65e-85
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MESNGTEFTGKRQKLAVEEQGRDTDMSNVLENEQCETIIKGSEEMESNIACLLEKIESFT 60
           MESNGTEFTGKRQKLAVEEQGRDTDMSNVLENEQCETIIKGSEEMESNIACLLEKIESFT
Sbjct: 14  MESNGTEFTGKRQKLAVEEQGRDTDMSNVLENEQCETIIKGSEEMESNIACLLEKIESFT 73

Query: 61  QLVSELLESGKTAFKELINEFEERIIAIHKDHVEKWQHEIKELRLIDSSNEEVSTILCNA 120
           QLVSELLESGKTAFKELINEFEERIIAIHKDHVEKWQHEIKELRLIDSSNEEVSTILCNA
Sbjct: 74  QLVSELLESGKTAFKELINEFEERIIAIHKDHVEKWQHEIKELRLIDSSNEEVSTILCNA 133

Query: 121 RNLLQNGHIQF 131
           RNLLQNGHIQF
Sbjct: 134 RNLLQNGHIQF 144

[Close]

BLAST of IVF0012486 vs. NCBI nr
Match: XP_038903068.1 (uncharacterized protein LOC120089754 isoform X2 [Benincasa hispida])

HSP 1 Score: 231 bits (589), Expect = 6.21e-76
Identity = 118/131 (90.08%), Postives = 124/131 (94.66%), Query Frame = 0


Query: 1   MESNGTEFTGKRQKLAVEEQGRDTDMSNVLENEQCETIIKGSEEMESNIACLLEKIESFT 60
           MESNGTEFTGKR KLA+EEQG+DT MSNVLENEQ +T I+GSEEMESNIACLLEKIESFT
Sbjct: 1   MESNGTEFTGKRMKLAMEEQGKDTGMSNVLENEQSDTSIRGSEEMESNIACLLEKIESFT 60

Query: 61  QLVSELLESGKTAFKELINEFEERIIAIHKDHVEKWQHEIKELRLIDSSNEEVSTILCNA 120
           QLVSELLESGKT FK+L NEFEERIIAIHKDHVEKWQHEIKELRL+DSSNEE STILCNA
Sbjct: 61  QLVSELLESGKTTFKDLSNEFEERIIAIHKDHVEKWQHEIKELRLLDSSNEEASTILCNA 120

Query: 121 RNLLQNGHIQF 131
           RNLLQNGHIQF
Sbjct: 121 RNLLQNGHIQF 131

[Close]

BLAST of IVF0012486 vs. NCBI nr
Match: XP_004141148.1 (uncharacterized protein LOC101207413 [Cucumis sativus] >XP_011652327.1 uncharacterized protein LOC101207413 [Cucumis sativus] >KGN59771.1 hypothetical protein Csa_000817 [Cucumis sativus])

HSP 1 Score: 230 bits (586), Expect = 1.78e-75
Identity = 120/131 (91.60%), Postives = 123/131 (93.89%), Query Frame = 0


Query: 1   MESNGTEFTGKRQKLAVEEQGRDTDMSNVLENEQCETIIKGSEEMESNIACLLEKIESFT 60
           MESNGTEF GKR KLAVEEQ  DTDMSN++ENEQCETIIKGSEEMESNIACLLEKIESFT
Sbjct: 1   MESNGTEFNGKRPKLAVEEQVSDTDMSNLVENEQCETIIKGSEEMESNIACLLEKIESFT 60

Query: 61  QLVSELLESGKTAFKELINEFEERIIAIHKDHVEKWQHEIKELRLIDSSNEEVSTILCNA 120
           QLVSELLESGKTAFK+L NEFEERIIAIHKDHVEKWQ EIKELRLIDSSNEE STILCNA
Sbjct: 61  QLVSELLESGKTAFKDLSNEFEERIIAIHKDHVEKWQDEIKELRLIDSSNEEASTILCNA 120

Query: 121 RNLLQNGHIQF 131
           RNLLQNG IQF
Sbjct: 121 RNLLQNGQIQF 131

[Close]

BLAST of IVF0012486 vs. NCBI nr
Match: XP_023540392.1 (uncharacterized protein LOC111800780 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023540393.1 uncharacterized protein LOC111800780 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 221 bits (563), Expect = 5.72e-72
Identity = 112/131 (85.50%), Postives = 124/131 (94.66%), Query Frame = 0


Query: 1   MESNGTEFTGKRQKLAVEEQGRDTDMSNVLENEQCETIIKGSEEMESNIACLLEKIESFT 60
           MESNGTEFTGKR KLA+EEQG+DT +SN+ ENEQCET I+GSEEMESNIA LLEKIESFT
Sbjct: 1   MESNGTEFTGKRMKLAMEEQGKDTSISNISENEQCETDIRGSEEMESNIARLLEKIESFT 60

Query: 61  QLVSELLESGKTAFKELINEFEERIIAIHKDHVEKWQHEIKELRLIDSSNEEVSTILCNA 120
           QLVSELLESGKTAFK+L NEFEE+IIAIHK++VE+WQHEIKELRL+DSSNEE ST+LCNA
Sbjct: 61  QLVSELLESGKTAFKDLSNEFEEQIIAIHKNNVERWQHEIKELRLLDSSNEEASTVLCNA 120

Query: 121 RNLLQNGHIQF 131
           RNLLQNGHIQF
Sbjct: 121 RNLLQNGHIQF 131

[Close]

BLAST of IVF0012486 vs. TAIR 10
Match: AT5G03050.1 (unknown protein; Has 33 Blast hits to 33 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 130.6 bits (327), Expect = 9.4e-31
Identity = 71/124 (57.26%), Postives = 93/124 (75.00%), Query Frame = 0


Query: 11  KRQKLAVEEQGRDT----DMSNVLENEQCETIIKGSEEMESNIACLLEKIESFTQLVSEL 70
           KR + + EE   D+     + + +ENE+ ET +  S+EME +IA +L+KIESFTQ VS L
Sbjct: 16  KRMRASDEEGKGDSRDGISLDHTIENEEAETKLVASDEMELSIAQILDKIESFTQTVSNL 75

Query: 71  LESGKTAFKELINEFEERIIAIHKDHVEKWQHEIKELRLIDSSNEEVSTILCNARNLLQN 130
           LE+GKT  KEL NEFEER+I IHK+HVEKWQ EIKELRL+D+SNEE +++L NAR L+QN
Sbjct: 76  LETGKTMLKELSNEFEERLIMIHKEHVEKWQDEIKELRLLDASNEETTSLLHNARYLIQN 135

The following BLAST results are available for this feature:

BLAST of IVF0012486 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0012486 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E1L2	2.9e-64	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CNM9	2.9e-64	100.00	uncharacterized protein LOC103502983 OS=Cucumis melo OX=3656 GN=LOC103502983 PE=...	[more]
A0A0A0LI92	4.5e-57	91.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G844890 PE=4 SV=1	[more]
A0A6J1I7S6	3.6e-54	86.26	uncharacterized protein LOC111470787 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1EXU6	6.1e-54	85.50	uncharacterized protein LOC111439190 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of IVF0012486 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008465341.1	6.24e-85	100.00	PREDICTED: uncharacterized protein LOC103502983 [Cucumis melo]	[more]
KAA0051263.1	9.65e-85	100.00	uncharacterized protein E6C27_scaffold2143G00210 [Cucumis melo var. makuwa] >TYK...	[more]
XP_038903068.1	6.21e-76	90.08	uncharacterized protein LOC120089754 isoform X2 [Benincasa hispida]	[more]
XP_004141148.1	1.78e-75	91.60	uncharacterized protein LOC101207413 [Cucumis sativus] >XP_011652327.1 uncharact...	[more]
XP_023540392.1	5.72e-72	85.50	uncharacterized protein LOC111800780 isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]

BLAST of IVF0012486 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G03050.1	9.4e-31	57.26	unknown protein; Has 33 Blast hits to 33 proteins in 10 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 42..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	PANTHER	PTHR35500	OS03G0108700 PROTEIN	coord: 1..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0012486.2	IVF0012486.2	mRNA