IVF0012482 (gene) Melon (IVF77) v1

Overview


Name	IVF0012482
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	la-related protein 1C
Location	chr08: 6116430 .. 6122988 (-)
RNA-Seq Expression	IVF0012482
Synteny	IVF0012482

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTCAACGATCCGATCCTTCTAAAAATCTTTTCCAAATCCTTCTGATTCTTAATTTCCAACTCAGTTTCTTCATTCTAGTTCTTGAATCTCGAGAAAAAAAGAACACGATTTTTTTCTTGATTTTTTTGCTTAATTTTTGGTTTCCATTTGCTCTGTTTGCCGTCGATCAAGGTACTGCCGTCTGAAAGAAAAAACCCTAGTTTCTAATTTACGATGGCTGCTTCTAATTTACCGGATGCTGATTCGGTGACGGCATCGATTGCAGATCATTCTCCTCGTAATTCTGGACAGAATAACAACAGTAGCAGTGGGAGTAGTCCCAAATCATCATCACGTCGTTCTGGTGGACGTACAGTGTCCTCTTCTCCATGGACACGGATTGTTCGTGGCGAGATAGATGTCGCGGCGGTTGTTTCGTCATCTGCATCTCCGACTGCTGTTGTTGAACCAGTTTCGTTTTTTCTTCTTCTGAAGAGCCAGTGGGTGAGAGTTATGATGGTGGGAATGGGTCGACTGCCAATGCTGGAAAGAAGCCAGCATGGAACAAACTCGCTAATGGAACTGAGGCTGGGCCTGTCATGGGGGCTGTGTCTTGGCCCGCTTTATCGGAGTCTGCTAAGGCTACTCCTAAATCATCTTCGGATTCACTTAAAAGTTTAGGGGATGGATCTACTGGCGCGCAGGTATTTTCTATCAATTTTTTATTGTTGTTGGGGTTTTTAAGAATAACACGAACTAAAGAAATGAAAAAGGATACATTCAGTTTGTTGGGAAAATATTTGAACTGCTGCAGTCTATCTTCATGATTAAGCTAATTTTTTTCAATTTCTCAAACGAAATGATGATAGATTAATGAATAGATTCAAGAATTTGTTTCTAAATTTGTCTATGTTTGGGGAAAATGAAAAATGTTGAAAAGTCTTCAGTTTTGGATGTACTTTGTGAGTTCCTTGGATAGGCTGAGAAACATTAACCGGTTCGTGGTGGGATATTTTATGCCAATACTCCTACGAAACAGACTAAGAAATGAACTGAAAATTTTGGGCTCCAGGGGATAATTAGAATTTTCATTAAATTTGCTATTAGTTATACGTCGATAAAGGGACTCTAAATTTATTGATTCAATATCTCTATCGTGCTATTATTTTATAGAATAGCTGTGGTCTCCATTGCACATTTATTGACGTAATATATATTTCCTGTTATGTGTAATGGAACGTTGTTGTGGATTTGTAATAGCTTCGGTCAATTAACTGTGTTCTTTGAAAGGAAAAAGCAAGGGAAGAAGATGAACCTTCTGTGAAAAAAACCCAAAAAGGCCACTCTTTGCATGATGTCCTTGTCAAACAAGGAGACATATAATTTTCTTTTGTAAATTTCATACAACAACAAAATTTATTATCTGAGGTAGAAAAATAAAGAGAACCGAGATAGAGGCTTAAATTTACAAAAGAAAAATTATATGTTACCACAATTCTAAAGAGGGTCTTCACTGTTTCTTTTTCGGGTACTAGTGAGTCTTCCTATATTTTATTTTTAATAAATATATGTAACATGCTCATTTTTTACCTTTTTTCCTCTTCTTTTTTCTTTTGCACATAGGGGACAGGAACTTCATCATCCGCACCATCAAACAAAGAAGGTAATAATGATGTTAGTCCTAATCCTGATTCAACACTTGCTCATCCAATAACTTCGCGCCAGAAATCAATGAGGCGTAATGGTTCGAGTAATTCATATAATAGTAACCTCCCTCAACAGTCTGCACCTTCAAGCCCTGTAATTGATACAGCTCCTAATAATTCTTCAAAGGATCGGACACAGAGAACCACATTTGTATCATCACAATCACATAATGATCATGGTCATCAACAACCACGTAATTCATTTCGGAGTCGTGGTGGCGGTTCACATCCACGGGGTGACAATTCCCATCATCATAACTATGGTTCTAGACGTGATCATGATCGTGGAAATCAAGATTGGAATTCAAACCGAAATTACAATGCACAACCTCATAGAGTGGTTCACAGGTTTATTAGACCTTCTCCACCTCCACCTCCTAATACTACTGGCTATATTTCTTCTCCAACAATGAGGGCTATTGGTGGTCCGCTACCCTTTCCTGGTAGGATCTACATTTTTTATGTGAGGTTCCACAGTTTTCCTCATTTGAACTTGCTTAATGATTGAATCTGCATGTAGATTTTGCTCCTCCAGTGGTGTATATTGGTCCTCCTCCTCCAGAGGCTCTTAGAGGTGTACCTTTTGTGGCTCCAATATCACCAAATGCGATGTTTTTTCATGGCCCAGACCCTCAGTTGTATGCTATGATAGTGAGTCAGATAGAATACTATTTCAGGTATATTTAATGTGATTGCTTTTAACTTTTCCCAGTCATCCTTGTTTAGTGTTAGAAATTTGAGAACATTCTAATGGTGATTGCACCTTGTATTTGTGAATTGCAGTGGTGAAAATTTAATAAAGGATACTTTCTTGAGGCAGAACATGAATGAAGAAGGATGGGTTCCAGTTAAATTAATTGCTAGCTTCAGCAAGGTGAATTTTTAGAGGATTTCATCAAGGACGTATAAGTAATTTTTTCTTGACGATGATGACAGGAAGATCTTCATTTTACTGTTATTTTCTGCTTCGTGCCCTGCCTGTGCATGTTATTCTCTGTTACTATTTTTTTAGAAAATGGTTTTTTTTTAATGTTTTCCTTTACTTCCTACTCGTGTTTGGAACTTTTGATTAGCTTTTATTTTCTGTGGCTTCCAAAAACATTTTAAGAAATTCTTGTCTAGTAAAAAAAGAAATATATATCCTGGCCACTGTTTTGATAAAAAAGAAAAGAATCCTCTTGAGCATGTCTACCAACACATATTAGATTTGGTTTTCAAACAGTCTTTGCTTCTAGACTTATTTGATTTATTAATGATCATAATAGTGTATCTCATGAAGAAAAAAAGGCTACTTACAACAAATGATTGAAAAAAAGAGAGAGCATCAACATAGGTGTTAAATTATGGGTTTTTATTATGGAAATTCAAATTAATCCAAGAAAAGACGTTAATTTATAGCAGCATGGCATAGATTTTTGTCTTATGCCACGGGGAGGTTGAAGGTTTATATACCTTTACCCTATGATTAATCAAGTATAGGTGTTAGTTTCTTGTTGTTTCCCTGTATGGTTGTTATGACATTTTTCCTTTATTTTATAGACCATGTTTCATCATGCATGTTGCCTCACTTTTTGGGCCCTGACATCCTCAGTTAAATATGGGATGCATGTTTTAATTTTCAAGAATTTTATGTCAATGAAATGTTTGATGTGGGATACAATTTCAAATGTTGAAATAGGGAGGCGATGAGTCTGTTAGTATCCCAATAACAAGAAACAGAATATATTACTATTATTGCGATATCAAAAGATAAATTACGATGCATAAAGTCCCACAGTACATAATCTCCAATCTGATCCTCTCTCCATAACGTCCCTAACCCCTATTTTATTTATAACCAGGTCTTGGTTACTAATTACCACTTTCTCAAACCCACTGTGGGCTCCATGTCTGGAACCCTAAACCCTACTCATTTTCTTAAGATATCCACTGTCCCTTCACAAAATTCTAGATAGTTGATGGTATTGCATTTAAAAGTGAGCAGTGACATTTTAAAGAGTAATTTGCTGAAGGCGTTAAATGATTTTATAAGATATGGCCATATGGGTTCAAGTTGTCTTGATCATGAGTGACATTAAGGGCATGTTTGGCCCAAGGATTTGGGGGAGTAGAGTTGTTAACCTACTTCTTGTTTGGCAGCACGAGGAGTTCTTAAACCCACTGTGGGATTCATGTCTAAAAAACTTCTCCTTTGACTTATTAACTCCTTGAAATGTGAGCCCCACGACTAAATAACTTCTTAGGCGTAGCAACTCTCCAGATAAACAACTGCACTTCTTCCTCCAAATACCCCAAGGGTTTTGGACCAGTTGGCTTGATGGCAAGTCTTGGAAAACCATTAGCAATACTTTGATTAAGAGAATATGGAGGGTTTGTATGACCCGTGTATTAAGATAAACTGACCTTCTTGTAGTACAAGTGGGTTTAGGGATTTGAGTCTCCAATCTCAAGGGACAGAGTACATGTCAATTAGTGTTGAGCTATGCTCACTTTAGATTCATCTTAGTAATTAGGAGACCAAAATTTTCCTCCATTGAGGTATTATGCAAGGTTCTGCCTCATTCTGTTTTCGTGGTAGTGGTGAACATCCTTAGTAGATTTATTACGAGGGATATGAATCTGACTTCACTAATGATAATGTGGACCATATTCTTTGGCGGTGTGAATTTTCTAGCTAGTGTTTGGGTTGCTTTTTTTTCTTTTTTTTTTTTTTGCCAAACATTTGGCATTAGGGCTGCTTGACATAGAGATGGTGTGGCGATTGAGGAGTCCCTTCTTAGTCTTAACTCTTCCTGTGGAGAGAAGGGCTGCTTTCTTTGCTTTACCTGGGGGTGCGCTATTTTGTGAGTTTTGTCTGGTGAGCCAAATAGTAGGGCTATTAGAGTTGTGGAGAGGGTTTCTAGTGATATTTGGTCTCTTGTTTGTGATGTTTTGGTGTGGGTTTTGATTTCAAAGGCTTTTTGTAACTATGTTATAGGTGCTATTTGTATAGTTAGAGTACCTCCTTTTAGAGGGTGCTCTTGCCTTTGTGGACTGATTTTATTGTATGCCCTTGTATCTCTCTTTTTTTCTTTTTTGTCTTGGAATTGCTTTTCGAGTTTTTGTAGTTGCCTCCGTTTGCTGGGTTTTACTATTATTTTCCTTTTCTCCCTCATGGCTTTCTTTCGCACTTCCATTCTCCTTGATGAAAGCAGTTCTTTTCCATAAAAAAGTACTTGCATGTGACTGCAAGGTCGGTGGTTCTATGCTTTCTGAGATAATTGTGAAGAACGACTTTTGTCATGTAGCTTCTATAATATACTCTGTCAGTAGATAGTCATCGTTTTCTCCTTTTAGATTTCTAAATCATGGAAGTTAATATGATTAATTCTGGGAACCAGAGTGCATATATTGGTCTTATTCTTCAAGAATATGTCATCCCGACACTCTTTTGTAGGTTCAACGCCTGACTGAAAATATTCAAACCATATTGGATGCGTTGCAATCATCTACAGTTGTGGAAGTAAAGGTCAGTAAATATCAGCTCCTGGACCAGCCTTTTCCTCCATCTGTAATTGAAATTCTAAGGGGTTTTGGATTATTTTATTTCATTATCTAGGTTGGGAAAATAATAATGAAAATTAAAATTTAAAAATGCAATGGTAAAATTTAAAATCATGTTTTTCTAATTCTTGTATATATAATCTTCTTCTATCTTTTTCCCCTTCTCTTAGGGAGATACTGTAAGGAGGCGACATGATTATGATAGATGGATTATTCGACCTGGTCAAGTTCCTAATATTTCCGGCCCACTAAGCCCATTAAGCCCCGGAAGTTCCAATCAGGATATGCTGGCAGGTGGTGTTCAAGGTATTGCACTAGAGAATGTTAATCATAAGGTCTCTGAAGGTGGACAGGGTGAGGTTCATGTTGATGAGGCATCCCATGGTGACAGTAATACCAAGGCGGGTTCGGAGCATTCATCTTCTGAAAGGAGTTAGACCAAGTTTGTGCTGTGAACCCCTGCGTCCTTCTGGATGAAATCTAGATGTGGGTTGTAGAGTTTAAATGAGGAGATGGTAGTGACATGGTTTGCTCACATGGTTTGCTCGACGAATATTCTCTTCTCTTGATGCCAAGTAAATTGGTAAGCTGAAGTTGAAAAAGAGGAGAAACAATTTTAAAAAGAAAAACCAAAAAAAAAAAAAAAAAAGGAAAGAAAAAGAAAAGAAAAGAAAAGAAAAACTAAAAGTCTATAACTTAAACTTAAAAAATTATTTAAAAGAAAAAGAAAAAGGAAAAAAAGACTATAACAGAAGTTCCTTTTATGGTGGAGGGATGCATTTTTGATTTTGTGGGCTGCTGTTGGCTGGCTGGTATGCTTTGTTTCTTAAGTTTATATTCTTTTTTGTTGTGATTTTGGTTTTTGGTGATGGTGGCATGTACTAAATGATGTGGGGGAATTTTGATTTGCTTCCCCATGGCTGCCCCTAAGCTGGTTTTTTGATATCTTTGGGGTCAGAGAACTTCGAGTTCTTCGATGAGAGAACAAACAACACGGTGGTTGGTAAAAGAAGTTGGAAAATGTTTGGGTTTCGTTGTGCAAGGTGAATCTAGAGCTGCAATTGCTGTTCTAAATCTTGAAGGTTCTTTCCATCTTCTTTTATTAATTGTTTTATCAGAGACTTTGCCATGGCGTTTTGCTCTATAAAAAAATATCTCTCTCAACTTCGAACGAGGCATTAGGAACTTCTGAAGATTGGACTCCCCACCTAATTATGTTCTGAAGTTTCTTGTCCAATTGATATATTATTTTGCTTGACATATCTTCATTTTATTGATACGTTTTGTTTTGGAACAAATATTCTTGAAAATGGGAATTTGGAATACCAC

mRNA sequence

CTCTCAACGATCCGATCCTTCTAAAAATCTTTTCCAAATCCTTCTGATTCTTAATTTCCAACTCAGTTTCTTCATTCTAGTTCTTGAATCTCGAGAAAAAAAGAACACGATTTTTTTCTTGATTTTTTTGCTTAATTTTTGGTTTCCATTTGCTCTGTTTGCCGTCGATCAAGATCATTCTCCTCGTAATTCTGGACAGAATAACAACAGTAGCAGTGGGAGTAGTCCCAAATCATCATCACGTCGTTCTGGTGGACGTACAGTGTCCTCTTCTCCATGGACACGGATTGTTCGTGGCGAGATAGATGTCGCGGCGGTTGTTTCGTCATCTGCATCTCCGACTGCTGTTGTTGAACCAGTTTCGTTTTTTCTTCTTCTGAAGAGCCAGTGGGTGAGAGTTATGATGGTGGGAATGGGTCGACTGCCAATGCTGGAAAGAAGCCAGCATGGAACAAACTCGCTAATGGAACTGAGGCTGGGCCTGTCATGGGGGCTGTGTCTTGGCCCGCTTTATCGGAGTCTGCTAAGGCTACTCCTAAATCATCTTCGGATTCACTTAAAAGTTTAGGGGATGGATCTACTGGCGCGCAGGGGACAGGAACTTCATCATCCGCACCATCAAACAAAGAAGGTAATAATGATGTTAGTCCTAATCCTGATTCAACACTTGCTCATCCAATAACTTCGCGCCAGAAATCAATGAGGCGTAATGGTTCGAGTAATTCATATAATAGTAACCTCCCTCAACAGTCTGCACCTTCAAGCCCTGTAATTGATACAGCTCCTAATAATTCTTCAAAGGATCGGACACAGAGAACCACATTTGTATCATCACAATCACATAATGATCATGGTCATCAACAACCACGTAATTCATTTCGGAGTCGTGGTGGCGGTTCACATCCACGGGGTGACAATTCCCATCATCATAACTATGGTTCTAGACGTGATCATGATCGTGGAAATCAAGATTGGAATTCAAACCGAAATTACAATGCACAACCTCATAGAGTGGTTCACAGGTTTATTAGACCTTCTCCACCTCCACCTCCTAATACTACTGGCTATATTTCTTCTCCAACAATGAGGGCTATTGGTGGTCCGCTACCCTTTCCTGATTTTGCTCCTCCAGTGGTGTATATTGGTCCTCCTCCTCCAGAGGCTCTTAGAGGTGTACCTTTTGTGGCTCCAATATCACCAAATGCGATGTTTTTTCATGGCCCAGACCCTCAGTTGTATGCTATGATAGTGAGTCAGATAGAATACTATTTCAGTGGTGAAAATTTAATAAAGGATACTTTCTTGAGGCAGAACATGAATGAAGAAGGATGGGTTCCAGTTAAATTAATTGCTAGCTTCAGCAAGGTTCAACGCCTGACTGAAAATATTCAAACCATATTGGATGCGTTGCAATCATCTACAGTTGTGGAAGTAAAGGGAGATACTGTAAGGAGGCGACATGATTATGATAGATGGATTATTCGACCTGGTCAAGTTCCTAATATTTCCGGCCCACTAAGCCCATTAAGCCCCGGAAGTTCCAATCAGGATATGCTGGCAGGTGGTGTTCAAGGTATTGCACTAGAGAATGTTAATCATAAGGTCTCTGAAGGTGGACAGGGTGAGGTTCATGTTGATGAGGCATCCCATGGTGACAGTAATACCAAGGCGGGTTCGGAGCATTCATCTTCTGAAAGGAGTTAGACCAAGTTTGTGCTGTGAACCCCTGCGTCCTTCTGGATGAAATCTAGATGTGGGTTGTAGAGTTTAAATGAGGAGATGGTAGTGACATGGTTTGCTCACATGGTTTGCTCGACGAATATTCTCTTCTCTTGATGCCAAGTAAATTGGTAAGCTGAAGTTGAAAAAGAGGAGAAACAATTTTAAAAAGAAAAACCAAAAAAAAAAAAAAAAAAGGAAAGAAAAAGAAAAGAAAAGAAAAGAAAAACTAAAAGTCTATAACTTAAACTTAAAAAATTATTTAAAAGAAAAAGAAAAAGGAAAAAAAGACTATAACAGAAGTTCCTTTTATGGTGGAGGGATGCATTTTTGATTTTGTGGGCTGCTGTTGGCTGGCTGGTATGCTTTGTTTCTTAAGTTTATATTCTTTTTTGTTGTGATTTTGGTTTTTGGTGATGGTGGCATGTACTAAATGATGTGGGGGAATTTTGATTTGCTTCCCCATGGCTGCCCCTAAGCTGGTTTTTTGATATCTTTGGGGTCAGAGAACTTCGAGTTCTTCGATGAGAGAACAAACAACACGGTGGTTGGTAAAAGAAGTTGGAAAATGTTTGGGTTTCGTTGTGCAAGGTGAATCTAGAGCTGCAATTGCTGTTCTAAATCTTGAAGGTTCTTTCCATCTTCTTTTATTAATTGTTTTATCAGAGACTTTGCCATGGCGTTTTGCTCTATAAAAAAATATCTCTCTCAACTTCGAACGAGGCATTAGGAACTTCTGAAGATTGGACTCCCCACCTAATTATGTTCTGAAGTTTCTTGTCCAATTGATATATTATTTTGCTTGACATATCTTCATTTTATTGATACGTTTTGTTTTGGAACAAATATTCTTGAAAATGGGAATTTGGAATACCAC

Coding sequence (CDS)

ATGGGGGCTGTGTCTTGGCCCGCTTTATCGGAGTCTGCTAAGGCTACTCCTAAATCATCTTCGGATTCACTTAAAAGTTTAGGGGATGGATCTACTGGCGCGCAGGGGACAGGAACTTCATCATCCGCACCATCAAACAAAGAAGGTAATAATGATGTTAGTCCTAATCCTGATTCAACACTTGCTCATCCAATAACTTCGCGCCAGAAATCAATGAGGCGTAATGGTTCGAGTAATTCATATAATAGTAACCTCCCTCAACAGTCTGCACCTTCAAGCCCTGTAATTGATACAGCTCCTAATAATTCTTCAAAGGATCGGACACAGAGAACCACATTTGTATCATCACAATCACATAATGATCATGGTCATCAACAACCACGTAATTCATTTCGGAGTCGTGGTGGCGGTTCACATCCACGGGGTGACAATTCCCATCATCATAACTATGGTTCTAGACGTGATCATGATCGTGGAAATCAAGATTGGAATTCAAACCGAAATTACAATGCACAACCTCATAGAGTGGTTCACAGGTTTATTAGACCTTCTCCACCTCCACCTCCTAATACTACTGGCTATATTTCTTCTCCAACAATGAGGGCTATTGGTGGTCCGCTACCCTTTCCTGATTTTGCTCCTCCAGTGGTGTATATTGGTCCTCCTCCTCCAGAGGCTCTTAGAGGTGTACCTTTTGTGGCTCCAATATCACCAAATGCGATGTTTTTTCATGGCCCAGACCCTCAGTTGTATGCTATGATAGTGAGTCAGATAGAATACTATTTCAGTGGTGAAAATTTAATAAAGGATACTTTCTTGAGGCAGAACATGAATGAAGAAGGATGGGTTCCAGTTAAATTAATTGCTAGCTTCAGCAAGGTTCAACGCCTGACTGAAAATATTCAAACCATATTGGATGCGTTGCAATCATCTACAGTTGTGGAAGTAAAGGGAGATACTGTAAGGAGGCGACATGATTATGATAGATGGATTATTCGACCTGGTCAAGTTCCTAATATTTCCGGCCCACTAAGCCCATTAAGCCCCGGAAGTTCCAATCAGGATATGCTGGCAGGTGGTGTTCAAGGTATTGCACTAGAGAATGTTAATCATAAGGTCTCTGAAGGTGGACAGGGTGAGGTTCATGTTGATGAGGCATCCCATGGTGACAGTAATACCAAGGCGGGTTCGGAGCATTCATCTTCTGAAAGGAGTTAG

Protein sequence

MGAVSWPALSESAKATPKSSSDSLKSLGDGSTGAQGTGTSSSAPSNKEGNNDVSPNPDSTLAHPITSRQKSMRRNGSSNSYNSNLPQQSAPSSPVIDTAPNNSSKDRTQRTTFVSSQSHNDHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNYNAQPHRVVHRFIRPSPPPPPNTTGYISSPTMRAIGGPLPFPDFAPPVVYIGPPPPEALRGVPFVAPISPNAMFFHGPDPQLYAMIVSQIEYYFSGENLIKDTFLRQNMNEEGWVPVKLIASFSKVQRLTENIQTILDALQSSTVVEVKGDTVRRRHDYDRWIIRPGQVPNISGPLSPLSPGSSNQDMLAGGVQGIALENVNHKVSEGGQGEVHVDEASHGDSNTKAGSEHSSSERS

Homology

[Close]

BLAST of IVF0012482 vs. ExPASy Swiss-Prot
Match: Q8RWR2 (La-related protein 1B OS=Arabidopsis thaliana OX=3702 GN=LARP1B PE=1 SV=2)

HSP 1 Score: 165.6 bits (418), Expect = 1.1e-39
Identity = 141/380 (37.11%), Postives = 210/380 (55.26%), Query Frame = 0


Query: 1   MGAV-SWPALSESAKAT--PKSSSDSLKSLGDGSTGAQGTGTSSSAPSNKEGNNDVSPNP 60
           MGA  SWPALS SA+++     S D+ K   DGS       +SS  P     N   + N 
Sbjct: 94  MGAAESWPALSLSARSSSIKSPSLDASKPFPDGS-------SSSIPPPQATSNTSTNANA 153

Query: 61  DSTLAHPITSRQKSMRRNGSSNSYNSNLPQQSAPSSPVIDTAPNNSSKDRTQRTTFVSSQ 120
            S+++   TS + S   N     +  N    S+ +S  +  A   +++D+       S +
Sbjct: 154 GSSVS--ATSSENSAVNNSQRKPFRRNNNTSSSSTSSNVSNAAPLNTRDQNH-----SQR 213

Query: 121 SHNDHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNYNA-----Q 180
                G    RNS R+R   S+PRG+  HH   G+RR+++ GNQ   S+RNY+      Q
Sbjct: 214 GGGSFGSGNFRNSQRNRNSSSYPRGEGLHH---GNRRNYEHGNQSGFSHRNYSGRDMHLQ 273

Query: 181 PHRVVHRFIRPS-----PPPPPNTTGYISSPTMRAIGGPLPFPDFAPPVVYIGP-PPPEA 240
           P R V   IRP      P  P ++  Y+++P + + GGP+ +PD+A  V    P P P  
Sbjct: 274 PQRGV-GMIRPQMLMGPPSFPASSAQYMAAPQLGSYGGPIIYPDYAQHVFMPHPSPDPMG 333

Query: 241 LRGVPFVAPISPNAMFFHGPDPQLYAMIVSQIEYYFSGENLIKDTFLRQNMNEEGWVPVK 300
           L G PF  P+ P  M+F   D  LY  I++Q+EYYFS +NL +D  LR  MN+EGWVPV+
Sbjct: 334 LVG-PF--PLQP--MYFRNFDAILYNKILTQVEYYFSADNLSRDEHLRDQMNDEGWVPVR 393

Query: 301 LIASFSKVQRLTENIQTILDALQSSTVVEVKGDTVRRRHDYDRWIIRPGQVPNISGPLSP 360
           +IA+F ++  LT NIQTIL+AL+SS VVE++G+T+RRR D+D++++   + P+ SGP   
Sbjct: 394 VIAAFRRLAELTNNIQTILEALRSSEVVEIQGETLRRRGDWDKYLL--PREPSRSGP--- 444

Query: 361 LSPGSSNQDMLAGGVQGIAL 367
            + G+SN   L   ++ + L
Sbjct: 454 -AAGASNNASLVSQIESMTL 444

[Close]

BLAST of IVF0012482 vs. ExPASy Swiss-Prot
Match: Q94K80 (La-related protein 1C OS=Arabidopsis thaliana OX=3702 GN=LARP1C PE=1 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 2.4e-37
Identity = 147/424 (34.67%), Postives = 221/424 (52.12%), Query Frame = 0


Query: 1   MGAVSWPALSESAKA-TPKSSSDSLKSLGDGSTGAQGTGT--------SSSAPSNKEGNN 60
           MGA SWPALSE+ KA + KSSSDSLKSLGD  + +  + +        ++S P+ K+   
Sbjct: 130 MGASSWPALSETTKAPSNKSSSDSLKSLGDVPSSSSASSSVPVTQGIANASVPAPKQAGR 189

Query: 61  DVSPNPDSTLAHPITSRQKSMR-RNGSSNSYNSNLPQQSAPSSPVIDTAPNNSSKDRTQR 120
             +PNP      P  SRQ+S + RNG+S S N  + Q SA  S     + N S + + Q+
Sbjct: 190 -ANPNPT-----PNHSRQRSFKQRNGASGSANGTVSQPSAQGSFTELPSHNPSPRGQNQK 249

Query: 121 TTFVSSQSHNDHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNY- 180
             F +SQ+H    +   R+S+R++ G        +HH ++G RR+ + GNQ+W   R++ 
Sbjct: 250 NGF-ASQNHGGTENPSQRDSYRNQNG--------NHHQSHGGRRNQEHGNQNWTFQRSFN 309

Query: 181 ----NAQPHRVVHRFIR-PSPPPPPNTTGYISSPTMRAIGGPLPFPDFAPPVVYIGPPPP 240
               NAQ  R    F+R PSP   P      + P        +PFP       Y      
Sbjct: 310 GREGNAQSQRGTPAFVRHPSPTVQPIPQFMAAQP----FPSHIPFPTELAQSSY------ 369

Query: 241 EALRGVPFVAPISPNAMFF-HGPDPQLYAMIVSQIEYYFSGENLIKDTFLRQNMNEEGWV 300
                +P++ PI     FF H  DP L+  +  QI+YYFS ENLI D +LR  MN EG+V
Sbjct: 370 --YPRMPYMTPIPHGPQFFYHYQDPPLHMKLHKQIQYYFSDENLITDIYLRGFMNNEGFV 429

Query: 301 PVKLIASFSKVQRLTENIQTILDALQSSTVVEVKGDTVRRRHDYDRWIIRPGQVPNISGP 360
           P++++A F KV  LT+NIQ I++ALQ+S  VEV+GD +R+R ++  W++R  + P  SGP
Sbjct: 430 PLRVVAGFKKVAELTDNIQQIVEALQNSPHVEVQGDFIRKRDNWQNWVLR--RNPTGSGP 489

Query: 361 LSPLSPGSSNQDMLAGGVQGIALENVNHKVSEGGQGEVHVDEASHGD----SNTKAGSEH 404
            S         D +A  +  ++++  +     G   ++   EA   D    S+T   S H
Sbjct: 490 QS-----VDRADAVAKRLGNLSVDQSSADPIGGSSSQLQPTEALSDDQQQSSSTAPVSNH 519

[Close]

BLAST of IVF0012482 vs. ExPASy Swiss-Prot
Match: Q940X9 (La-related protein 1A OS=Arabidopsis thaliana OX=3702 GN=LARP1A PE=1 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 4.0e-16
Identity = 76/209 (36.36%), Postives = 106/209 (50.72%), Query Frame = 0


Query: 208 PFPDFAPPVVYIGPPPPEALRG--VPFVAPISPNAMFFHGP---DPQ---LYAMIVSQIE 267
           P P F  PV Y+  PPP A+RG   P  AP   N     GP    P+   L   ++ Q+E
Sbjct: 232 PGPGFPGPVYYLPGPPPGAIRGPYPPRFAPYPVN----QGPPILSPEKLDLRDRVLKQVE 291

Query: 268 YYFSGENLIKDTFLRQNMNEEGWVPVKLIASFSKVQRLTENIQTILDALQSSTVVEVKGD 327
           YYFS ENL  D +L   M+EEGWVP K+IA F +V+ +T ++  I+ AL  S  VEV+GD
Sbjct: 292 YYFSDENLENDHYLISLMDEEGWVPTKIIAGFKRVKAMTMDVDFIVYALGFSNSVEVQGD 351

Query: 328 TVRRRHDYDRWIIRPGQVPNIS----GPLSPLSPGS-SNQDMLAGGVQGIALENVNHKVS 387
            +R+R  +  WI  P    + S    G     SP S ++ D      +G +   V+   S
Sbjct: 352 QIRKRDKWSDWI--PASKKSTSAETIGDGDKDSPKSITSGDNFGNPSKGSSKPTVSDFSS 411

Query: 388 EGGQGEVHVDEASHGDSNTKAGSEHSSSE 404
           EG Q        S   +N K+G+  SS++
Sbjct: 412 EGAQ--------SSRTNNYKSGNLKSSAD 426

[Close]

BLAST of IVF0012482 vs. ExPASy Swiss-Prot
Match: Q6PKG0 (La-related protein 1 OS=Homo sapiens OX=9606 GN=LARP1 PE=1 SV=2)

HSP 1 Score: 81.6 bits (200), Expect = 2.2e-14
Identity = 44/115 (38.26%), Postives = 67/115 (58.26%), Query Frame = 0


Query: 220 GPPPPEALRGVPFVAPISPNAMFFHGPDPQLYAMIVSQIEYYFSGENLIKDTFLRQNMNE 279
           GP  P+ +  + +      +   +      L   I  QIEYYFS +NL +D FLR+ M+ 
Sbjct: 373 GPRTPKYMNNITYYFDNVSSTELYSVDQELLKDYIKRQIEYYFSVDNLERDFFLRRKMDA 432

Query: 280 EGWVPVKLIASFSKVQRLTENIQTILDALQSSTVVEVKGDTVRRRHDYDRWIIRP 335
           +G++P+ LIASF +VQ LT +I  I  AL+ S VVE+  + VRRR + ++W + P
Sbjct: 433 DGFLPITLIASFHRVQALTTDISLIFAALKDSKVVEIVDEKVRRREEPEKWPLPP 487

[Close]

BLAST of IVF0012482 vs. ExPASy Swiss-Prot
Match: D5MCN2 (La-related protein 1 OS=Caenorhabditis elegans OX=6239 GN=larp-1 PE=4 SV=2)

HSP 1 Score: 77.0 bits (188), Expect = 5.4e-13
Identity = 64/172 (37.21%), Postives = 87/172 (50.58%), Query Frame = 0


Query: 183 PSPPPPPNTTGYISSPTMRAIGGPLPFPDFAPPVVYIGPPPPEALRGVPFVAPISPNAMF 242
           P  PP P  + ++ SP +   GG           V  G P   A   +PF    +P    
Sbjct: 522 PFRPPMPMLSPHLMSPPLDRDGG-------VTSPVSNGEPINTA---IPFAPIYNPPTAP 581

Query: 243 FHGPDPQLYAMIVSQIEYYFSGENLIKDTFLRQNMNEEGWVPVKLIASFSKVQRLTENIQ 302
               D  L   +  QIEYYFS ENL KD FLR+ M  EG++PV LIASF +V+ LTE+  
Sbjct: 582 RPVTDDTLKEYVRKQIEYYFSEENLQKDFFLRRKMGPEGYLPVALIASFPRVRSLTEDYS 641

Query: 303 TILDALQSSTVVEVKGDTVRRRHDYDRWIIRPGQVPNISGPLSPLSPGSSNQ 355
            IL+AL+ ST V++  D ++ R   +  I     +P +SG  S   PG S+Q
Sbjct: 642 LILEALKDSTKVDMSPDGLQIRAPVNPTIW--PLMPTVSGADS--LPGPSSQ 679

[Close]

BLAST of IVF0012482 vs. ExPASy TrEMBL
Match: A0A5A7SHL1 (La-related protein 1C OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001020 PE=4 SV=1)

HSP 1 Score: 781.6 bits (2017), Expect = 1.6e-222
Identity = 404/405 (99.75%), Postives = 405/405 (100.00%), Query Frame = 0


Query: 1   MGAVSWPALSESAKATPKSSSDSLKSLGDGSTGAQGTGTSSSAPSNKEGNNDVSPNPDST 60
           MGAVSWPALSESAKATPKSSSDSLKSLGDGSTGAQGTGTSSSAPSNKEGNNDVSPNPDST
Sbjct: 123 MGAVSWPALSESAKATPKSSSDSLKSLGDGSTGAQGTGTSSSAPSNKEGNNDVSPNPDST 182

Query: 61  LAHPITSRQKSMRRNGSSNSYNSNLPQQSAPSSPVIDTAPNNSSKDRTQRTTFVSSQSHN 120
           LAHPITSRQKSMRRNGSSNSYNSNLPQQSAPSSPVIDTAPNNSSKD+TQRTTFVSSQSHN
Sbjct: 183 LAHPITSRQKSMRRNGSSNSYNSNLPQQSAPSSPVIDTAPNNSSKDQTQRTTFVSSQSHN 242

Query: 121 DHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNYNAQPHRVVHRF 180
           DHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNYNAQPHRVVHRF
Sbjct: 243 DHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNYNAQPHRVVHRF 302

Query: 181 IRPSPPPPPNTTGYISSPTMRAIGGPLPFPDFAPPVVYIGPPPPEALRGVPFVAPISPNA 240
           IRPSPPPPPNTTGYISSPTMRAIGGPLPFPDFAPPVVYIGPPPPEALRGVPFVAPISPNA
Sbjct: 303 IRPSPPPPPNTTGYISSPTMRAIGGPLPFPDFAPPVVYIGPPPPEALRGVPFVAPISPNA 362

Query: 241 MFFHGPDPQLYAMIVSQIEYYFSGENLIKDTFLRQNMNEEGWVPVKLIASFSKVQRLTEN 300
           MFFHGPDPQLYAMIVSQIEYYFSGENLIKDTFLRQNMNEEGWVPVKLIASFSKVQRLTEN
Sbjct: 363 MFFHGPDPQLYAMIVSQIEYYFSGENLIKDTFLRQNMNEEGWVPVKLIASFSKVQRLTEN 422

Query: 301 IQTILDALQSSTVVEVKGDTVRRRHDYDRWIIRPGQVPNISGPLSPLSPGSSNQDMLAGG 360
           IQTILDALQSSTVVEVKGDTVRRRHDYDRWIIRPGQVPNISGPLSPLSPGSSNQDMLAGG
Sbjct: 423 IQTILDALQSSTVVEVKGDTVRRRHDYDRWIIRPGQVPNISGPLSPLSPGSSNQDMLAGG 482

Query: 361 VQGIALENVNHKVSEGGQGEVHVDEASHGDSNTKAGSEHSSSERS 406
           VQGIALENVNHKVSEGGQGEVHVDEASHGDSNTKAGSEHSSSERS
Sbjct: 483 VQGIALENVNHKVSEGGQGEVHVDEASHGDSNTKAGSEHSSSERS 527

[Close]

BLAST of IVF0012482 vs. ExPASy TrEMBL
Match: A0A1S3B2V3 (la-related protein 1C OS=Cucumis melo OX=3656 GN=LOC103485155 PE=4 SV=1)

HSP 1 Score: 781.6 bits (2017), Expect = 1.6e-222
Identity = 404/405 (99.75%), Postives = 405/405 (100.00%), Query Frame = 0


Query: 1   MGAVSWPALSESAKATPKSSSDSLKSLGDGSTGAQGTGTSSSAPSNKEGNNDVSPNPDST 60
           MGAVSWPALSESAKATPKSSSDSLKSLGDGSTGAQGTGTSSSAPSNKEGNNDVSPNPDST
Sbjct: 123 MGAVSWPALSESAKATPKSSSDSLKSLGDGSTGAQGTGTSSSAPSNKEGNNDVSPNPDST 182

Query: 61  LAHPITSRQKSMRRNGSSNSYNSNLPQQSAPSSPVIDTAPNNSSKDRTQRTTFVSSQSHN 120
           LAHPITSRQKSMRRNGSSNSYNSNLPQQSAPSSPVIDTAPNNSSKD+TQRTTFVSSQSHN
Sbjct: 183 LAHPITSRQKSMRRNGSSNSYNSNLPQQSAPSSPVIDTAPNNSSKDQTQRTTFVSSQSHN 242

Query: 121 DHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNYNAQPHRVVHRF 180
           DHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNYNAQPHRVVHRF
Sbjct: 243 DHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNYNAQPHRVVHRF 302

Query: 181 IRPSPPPPPNTTGYISSPTMRAIGGPLPFPDFAPPVVYIGPPPPEALRGVPFVAPISPNA 240
           IRPSPPPPPNTTGYISSPTMRAIGGPLPFPDFAPPVVYIGPPPPEALRGVPFVAPISPNA
Sbjct: 303 IRPSPPPPPNTTGYISSPTMRAIGGPLPFPDFAPPVVYIGPPPPEALRGVPFVAPISPNA 362

Query: 241 MFFHGPDPQLYAMIVSQIEYYFSGENLIKDTFLRQNMNEEGWVPVKLIASFSKVQRLTEN 300
           MFFHGPDPQLYAMIVSQIEYYFSGENLIKDTFLRQNMNEEGWVPVKLIASFSKVQRLTEN
Sbjct: 363 MFFHGPDPQLYAMIVSQIEYYFSGENLIKDTFLRQNMNEEGWVPVKLIASFSKVQRLTEN 422

Query: 301 IQTILDALQSSTVVEVKGDTVRRRHDYDRWIIRPGQVPNISGPLSPLSPGSSNQDMLAGG 360
           IQTILDALQSSTVVEVKGDTVRRRHDYDRWIIRPGQVPNISGPLSPLSPGSSNQDMLAGG
Sbjct: 423 IQTILDALQSSTVVEVKGDTVRRRHDYDRWIIRPGQVPNISGPLSPLSPGSSNQDMLAGG 482

Query: 361 VQGIALENVNHKVSEGGQGEVHVDEASHGDSNTKAGSEHSSSERS 406
           VQGIALENVNHKVSEGGQGEVHVDEASHGDSNTKAGSEHSSSERS
Sbjct: 483 VQGIALENVNHKVSEGGQGEVHVDEASHGDSNTKAGSEHSSSERS 527

[Close]

BLAST of IVF0012482 vs. ExPASy TrEMBL
Match: A0A6J1GDH3 (la-related protein 1C-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453192 PE=4 SV=1)

HSP 1 Score: 660.6 bits (1703), Expect = 4.2e-186
Identity = 349/415 (84.10%), Postives = 376/415 (90.60%), Query Frame = 0


Query: 1   MGAVSWPALSESAKATPKSSSDSLKSLGDGSTGAQGTGTSSSAPSNKEGNNDVSPNPDST 60
           MGAVSWPALSESAK TPKSSSDS+KSLGDGS G QGTGTSSS+ SNKEGNNDVSPNPDST
Sbjct: 122 MGAVSWPALSESAKGTPKSSSDSIKSLGDGSAGVQGTGTSSSS-SNKEGNNDVSPNPDST 181

Query: 61  LAHPITSRQKSMRRNGSSNSYNSNLPQQSAPSSPVIDTAPNNSSKDRTQRTTFVSSQSHN 120
           L HPITSRQKS+RRNGS++SYNS L QQSAPSSPVID APN+SS+D+TQRT F+SSQSHN
Sbjct: 182 LTHPITSRQKSLRRNGSNSSYNSALSQQSAPSSPVIDPAPNSSSRDQTQRTAFISSQSHN 241

Query: 121 DHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNYNAQPHRVVHRF 180
           DHGHQQPR+SFRSRGGGSHPRGDNSHHHNY SRRDHDRGNQDWNSNRN+NAQPHRVVHRF
Sbjct: 242 DHGHQQPRSSFRSRGGGSHPRGDNSHHHNYSSRRDHDRGNQDWNSNRNFNAQPHRVVHRF 301

Query: 181 IRPSPPPPPNTTGYISSPTMRAIGGPLPFPDFAPPVVYIG-----PPPPEALRGVPFVAP 240
           IRP PPPPPNTTG+ISSPTMR IGGPLPFPDF PPVVYIG     PPPPEALRGVPFVAP
Sbjct: 302 IRPPPPPPPNTTGFISSPTMRPIGGPLPFPDFVPPVVYIGPPPPPPPPPEALRGVPFVAP 361

Query: 241 ISPNAMFFHGPDPQLYAMIVSQIEYYFSGENLIKDTFLRQNMNEEGWVPVKLIASFSKVQ 300
           I PNAMFFHGPDPQLYAMIVSQIEYYFSGENL+KDTFLRQ M+E+GWVPV+LIA+FSKV+
Sbjct: 362 IPPNAMFFHGPDPQLYAMIVSQIEYYFSGENLVKDTFLRQKMDEDGWVPVRLIATFSKVK 421

Query: 301 RLTENIQTILDALQSSTVVEVKGDTVRRRHDYDRWIIRPGQVPNISGPLSPLSPGSSNQD 360
           RLTENIQTILDALQSST+VEVKGD VRRR+DYDRWIIRPGQVPNI+ PLSP+   SSNQD
Sbjct: 422 RLTENIQTILDALQSSTLVEVKGDKVRRRNDYDRWIIRPGQVPNIAAPLSPV---SSNQD 481

Query: 361 MLAGGVQGIALENVNHKVSEGGQGEVHVDEASHGDS-----NTKAGSEHSSSERS 406
           MLA GVQGIALEN+NH+ SEGGQG+VHV+    GD      NTKAG + SSSERS
Sbjct: 482 MLAAGVQGIALENINHRDSEGGQGDVHVEAQPCGDDRPGQVNTKAGPDCSSSERS 532

[Close]

BLAST of IVF0012482 vs. ExPASy TrEMBL
Match: A0A6J1GE82 (la-related protein 1C-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453192 PE=4 SV=1)

HSP 1 Score: 654.8 bits (1688), Expect = 2.3e-184
Identity = 351/430 (81.63%), Postives = 377/430 (87.67%), Query Frame = 0


Query: 1   MGAVSWPALSESAKATPKSSSDSLKSLGDGSTGAQGTGTSSSAPSNKEGNNDVSPNPDST 60
           MGAVSWPALSESAK TPKSSSDS+KSLGDGS G QGTGTSSS+ SNKEGNNDVSPNPDST
Sbjct: 122 MGAVSWPALSESAKGTPKSSSDSIKSLGDGSAGVQGTGTSSSS-SNKEGNNDVSPNPDST 181

Query: 61  LAHPITSRQKSMRRNGSSNSYNSNLPQQSAPSSPVIDTAPNNSSKDRTQRTTFVSSQSHN 120
           L HPITSRQKS+RRNGS++SYNS L QQSAPSSPVID APN+SS+D+TQRT F+SSQSHN
Sbjct: 182 LTHPITSRQKSLRRNGSNSSYNSALSQQSAPSSPVIDPAPNSSSRDQTQRTAFISSQSHN 241

Query: 121 DHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNYNAQPHRVVHRF 180
           DHGHQQPR+SFRSRGGGSHPRGDNSHHHNY SRRDHDRGNQDWNSNRN+NAQPHRVVHRF
Sbjct: 242 DHGHQQPRSSFRSRGGGSHPRGDNSHHHNYSSRRDHDRGNQDWNSNRNFNAQPHRVVHRF 301

Query: 181 IRPSPPPPPNTTGYISSPTMRAIGGPLPFPDFAPPVVYIG-----PPPPEALRGVPFVAP 240
           IRP PPPPPNTTG+ISSPTMR IGGPLPFPDF PPVVYIG     PPPPEALRGVPFVAP
Sbjct: 302 IRPPPPPPPNTTGFISSPTMRPIGGPLPFPDFVPPVVYIGPPPPPPPPPEALRGVPFVAP 361

Query: 241 ISPNAMFFHGPDPQLYAMIVSQIEYYFSGENLIKDTFLRQNMNEEGWVPVKLIASFSKVQ 300
           I PNAMFFHGPDPQLYAMIVSQIEYYFSGENL+KDTFLRQ M+E+GWVPV+LIA+FSKV+
Sbjct: 362 IPPNAMFFHGPDPQLYAMIVSQIEYYFSGENLVKDTFLRQKMDEDGWVPVRLIATFSKVK 421

Query: 301 RLTENIQTILDALQSSTVVEVKGDTVRRRHDYDRWIIRPGQVPNISGPLSPLSPGSSNQD 360
           RLTENIQTILDALQSST+VEVKGD VRRR+DYDRWIIRPGQVPNI+ PLSP+   SSNQD
Sbjct: 422 RLTENIQTILDALQSSTLVEVKGDKVRRRNDYDRWIIRPGQVPNIAAPLSPV---SSNQD 481

Query: 361 MLAGGVQGIALENVNHKVSEGGQGEVHVDEASH--------------------GDSNTKA 406
           MLA GVQGIALEN+NH+ SEGGQG+VHV EA H                    G  NTKA
Sbjct: 482 MLAAGVQGIALENINHRDSEGGQGDVHV-EALHSRRPSGNLSMQAQPCGDDRPGQVNTKA 541

[Close]

BLAST of IVF0012482 vs. ExPASy TrEMBL
Match: A0A6J1IMA2 (la-related protein 1C-like OS=Cucurbita maxima OX=3661 GN=LOC111477768 PE=4 SV=1)

HSP 1 Score: 646.0 bits (1665), Expect = 1.1e-181
Identity = 345/418 (82.54%), Postives = 371/418 (88.76%), Query Frame = 0


Query: 1   MGAVSWPALSESAKATPKSSSDSLKSLGDGSTGAQGTGTSSSAPSNKEGNNDVSPNPDST 60
           MGAVSWPALSESAK TPKSSSDS+KSLGDG  GAQGT TSSS+ SNKEGNNDVSPNPDST
Sbjct: 120 MGAVSWPALSESAKGTPKSSSDSIKSLGDGYAGAQGTETSSSSSSNKEGNNDVSPNPDST 179

Query: 61  LAHPITSRQKSMRRNGSSNSYNSNLPQQSAPSSPVIDTAPNNSSKDRTQRTTFVSSQSHN 120
           L HPITSRQKSMRRNGS++SYNS L QQSAPSSPVID APN+SS+D+TQRT F+SSQSHN
Sbjct: 180 LTHPITSRQKSMRRNGSNSSYNSALSQQSAPSSPVIDPAPNSSSRDQTQRTAFISSQSHN 239

Query: 121 DHGHQQPR-NSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNYNAQPHRVVHR 180
           DHGHQQPR +SFRSRGGGSHPRGDNSHHHNY SR DHDRGNQDWNSNRN+NAQPHRVVHR
Sbjct: 240 DHGHQQPRSSSFRSRGGGSHPRGDNSHHHNYSSRHDHDRGNQDWNSNRNFNAQPHRVVHR 299

Query: 181 FIRPSPPPPPNTTGYISSPTMRAIGGPLPFPDFAPPVVYIG-------PPPPEALRGVPF 240
           FIRP PPPPPNTTG+ISSPTMR IGGPLPFPDF PPVVYIG       PPPPEALRGVPF
Sbjct: 300 FIRPPPPPPPNTTGFISSPTMRPIGGPLPFPDFVPPVVYIGPPPPPPPPPPPEALRGVPF 359

Query: 241 VAPISPNAMFFHGPDPQLYAMIVSQIEYYFSGENLIKDTFLRQNMNEEGWVPVKLIASFS 300
           VAPI PNAMFFHGPDPQLYAMIVSQIEYYFSGENL+KDTFLRQ M+E+GWVPV+LIA+FS
Sbjct: 360 VAPIPPNAMFFHGPDPQLYAMIVSQIEYYFSGENLVKDTFLRQKMDEDGWVPVRLIATFS 419

Query: 301 KVQRLTENIQTILDALQSSTVVEVKGDTVRRRHDYDRWIIRPGQVPNISGPLSPLSPGSS 360
           KV+RLTENIQTILDALQSST+VEVKGD +RRR+DYDRWIIRPGQVPNI+ PLSP+   SS
Sbjct: 420 KVKRLTENIQTILDALQSSTLVEVKGDKLRRRNDYDRWIIRPGQVPNIAAPLSPV---SS 479

Query: 361 NQDMLAGGVQGIALENVNHKVSEGGQGEVHVDEASHGDS-----NTKAGSEHSSSERS 406
           NQDMLA GVQGIALEN+N + SEGGQG  HV+    GD      NTKAG + SSSERS
Sbjct: 480 NQDMLAAGVQGIALENINRRDSEGGQGGGHVEAQPCGDDRPGQVNTKAGPDCSSSERS 534

[Close]

BLAST of IVF0012482 vs. NCBI nr
Match: XP_008440860.1 (PREDICTED: la-related protein 1C [Cucumis melo] >KAA0025648.1 la-related protein 1C [Cucumis melo var. makuwa] >TYK12521.1 la-related protein 1C [Cucumis melo var. makuwa])

HSP 1 Score: 780 bits (2015), Expect = 3.42e-282
Identity = 404/405 (99.75%), Postives = 405/405 (100.00%), Query Frame = 0


Query: 1   MGAVSWPALSESAKATPKSSSDSLKSLGDGSTGAQGTGTSSSAPSNKEGNNDVSPNPDST 60
           MGAVSWPALSESAKATPKSSSDSLKSLGDGSTGAQGTGTSSSAPSNKEGNNDVSPNPDST
Sbjct: 123 MGAVSWPALSESAKATPKSSSDSLKSLGDGSTGAQGTGTSSSAPSNKEGNNDVSPNPDST 182

Query: 61  LAHPITSRQKSMRRNGSSNSYNSNLPQQSAPSSPVIDTAPNNSSKDRTQRTTFVSSQSHN 120
           LAHPITSRQKSMRRNGSSNSYNSNLPQQSAPSSPVIDTAPNNSSKD+TQRTTFVSSQSHN
Sbjct: 183 LAHPITSRQKSMRRNGSSNSYNSNLPQQSAPSSPVIDTAPNNSSKDQTQRTTFVSSQSHN 242

Query: 121 DHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNYNAQPHRVVHRF 180
           DHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNYNAQPHRVVHRF
Sbjct: 243 DHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNYNAQPHRVVHRF 302

Query: 181 IRPSPPPPPNTTGYISSPTMRAIGGPLPFPDFAPPVVYIGPPPPEALRGVPFVAPISPNA 240
           IRPSPPPPPNTTGYISSPTMRAIGGPLPFPDFAPPVVYIGPPPPEALRGVPFVAPISPNA
Sbjct: 303 IRPSPPPPPNTTGYISSPTMRAIGGPLPFPDFAPPVVYIGPPPPEALRGVPFVAPISPNA 362

Query: 241 MFFHGPDPQLYAMIVSQIEYYFSGENLIKDTFLRQNMNEEGWVPVKLIASFSKVQRLTEN 300
           MFFHGPDPQLYAMIVSQIEYYFSGENLIKDTFLRQNMNEEGWVPVKLIASFSKVQRLTEN
Sbjct: 363 MFFHGPDPQLYAMIVSQIEYYFSGENLIKDTFLRQNMNEEGWVPVKLIASFSKVQRLTEN 422

Query: 301 IQTILDALQSSTVVEVKGDTVRRRHDYDRWIIRPGQVPNISGPLSPLSPGSSNQDMLAGG 360
           IQTILDALQSSTVVEVKGDTVRRRHDYDRWIIRPGQVPNISGPLSPLSPGSSNQDMLAGG
Sbjct: 423 IQTILDALQSSTVVEVKGDTVRRRHDYDRWIIRPGQVPNISGPLSPLSPGSSNQDMLAGG 482

Query: 361 VQGIALENVNHKVSEGGQGEVHVDEASHGDSNTKAGSEHSSSERS 405
           VQGIALENVNHKVSEGGQGEVHVDEASHGDSNTKAGSEHSSSERS
Sbjct: 483 VQGIALENVNHKVSEGGQGEVHVDEASHGDSNTKAGSEHSSSERS 527

[Close]

BLAST of IVF0012482 vs. NCBI nr
Match: XP_004134846.1 (la-related protein 1C [Cucumis sativus] >KAE8647616.1 hypothetical protein Csa_003707 [Cucumis sativus])

HSP 1 Score: 754 bits (1948), Expect = 5.86e-272
Identity = 388/404 (96.04%), Postives = 397/404 (98.27%), Query Frame = 0


Query: 1   MGAVSWPALSESAKATPKSSSDSLKSLGDGSTGAQGTGTSSSAPSNKEGNNDVSPNPDST 60
           MGAVSWPALSESAK TPKSSSDSLKSLGDGS GAQGTGTSSSA SNKEGNNDVSPNPDST
Sbjct: 125 MGAVSWPALSESAKGTPKSSSDSLKSLGDGSAGAQGTGTSSSASSNKEGNNDVSPNPDST 184

Query: 61  LAHPITSRQKSMRRNGSSNSYNSNLPQQSAPSSPVIDTAPNNSSKDRTQRTTFVSSQSHN 120
           L HPITSRQKSMRRNGSSNSYNS+LPQQSAPSSPVIDTAPNNS KD+TQRTTFVSSQSH+
Sbjct: 185 LTHPITSRQKSMRRNGSSNSYNSSLPQQSAPSSPVIDTAPNNSPKDQTQRTTFVSSQSHS 244

Query: 121 DHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNYNAQPHRVVHRF 180
           DHGHQQPRNS+RSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNYNAQPHRVVHRF
Sbjct: 245 DHGHQQPRNSYRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNYNAQPHRVVHRF 304

Query: 181 IRPSPPPPPNTTGYISSPTMRAIGGPLPFPDFAPPVVYIGPPPPEALRGVPFVAPISPNA 240
           IRPSPPPPPNTTGYISSPTMRAIGGPLPFPDFAPPVVYIGPPPPEALRGVPFVAPISPNA
Sbjct: 305 IRPSPPPPPNTTGYISSPTMRAIGGPLPFPDFAPPVVYIGPPPPEALRGVPFVAPISPNA 364

Query: 241 MFFHGPDPQLYAMIVSQIEYYFSGENLIKDTFLRQNMNEEGWVPVKLIASFSKVQRLTEN 300
           MFFHGPDPQLYAMIVSQIEYYFSGENLIKDTFLRQNMNEEGWVPVKLIASFSKVQRLTEN
Sbjct: 365 MFFHGPDPQLYAMIVSQIEYYFSGENLIKDTFLRQNMNEEGWVPVKLIASFSKVQRLTEN 424

Query: 301 IQTILDALQSSTVVEVKGDTVRRRHDYDRWIIRPGQVPNISGPLSPLSPGSSNQDMLAGG 360
           IQTILDALQSSTVVEVKGDTVRRRHDYDRWIIRPGQVPNISGPLSPLSPGSS QDMLA G
Sbjct: 425 IQTILDALQSSTVVEVKGDTVRRRHDYDRWIIRPGQVPNISGPLSPLSPGSSKQDMLAAG 484

Query: 361 VQGIALENVNHKVSEGGQGEVHVDEASHGDSNTKAGSEHSSSER 404
           V+GIALEN+NH+VSEGGQG+VHVDEASHGD+NTKAGSEHSSSER
Sbjct: 485 VKGIALENINHRVSEGGQGDVHVDEASHGDNNTKAGSEHSSSER 528

[Close]

BLAST of IVF0012482 vs. NCBI nr
Match: XP_038881160.1 (la-related protein 1C-like [Benincasa hispida])

HSP 1 Score: 679 bits (1751), Expect = 3.77e-242
Identity = 360/405 (88.89%), Postives = 373/405 (92.10%), Query Frame = 0


Query: 1   MGAVSWPALSESAKATPKSSSDSLKSLGDGSTGAQGTGTSSSAPSNKEGNNDVSPNPDST 60
           MGAVSWPALSESAK TPKSSSDSLKSLGDGSTGAQGTG SSSA SNKEGNNDVSPNPDST
Sbjct: 122 MGAVSWPALSESAKGTPKSSSDSLKSLGDGSTGAQGTGPSSSASSNKEGNNDVSPNPDST 181

Query: 61  LAHPITSRQKSMRRNGSSNSYNSNLPQQSAPSSPVIDTAPNNSSKDRTQRTTFVSSQSHN 120
           L HPIT RQKSMRRNGSSNSYNS+LPQQSAPSSPVID+APNNS KD+TQRTT VSSQSHN
Sbjct: 182 LTHPITPRQKSMRRNGSSNSYNSSLPQQSAPSSPVIDSAPNNSPKDQTQRTTLVSSQSHN 241

Query: 121 DHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNYNAQPHRVVHRF 180
           DHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRD+DRGNQDWNSNRNYNAQPHRVVHRF
Sbjct: 242 DHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDYDRGNQDWNSNRNYNAQPHRVVHRF 301

Query: 181 IRPSPPPPPNTTGYISSPTMRAIGGPLPFPDFAPPVVYIGPPPPEALRGVPFVAPISPNA 240
           IRP PPPPPNTT +ISSPTMR IGGPLPFPDF PPVVYIGPPP EALRGVPFVAPISPNA
Sbjct: 302 IRPPPPPPPNTTAFISSPTMRPIGGPLPFPDFVPPVVYIGPPP-EALRGVPFVAPISPNA 361

Query: 241 MFFHGPDPQLYAMIVSQIEYYFSGENLIKDTFLRQNMNEEGWVPVKLIASFSKVQRLTEN 300
           MFFH PDPQLY MIVSQIEYYFS ENLIKDTFLRQNMNEEGWVPVKLIASFSKVQRLTEN
Sbjct: 362 MFFHSPDPQLYTMIVSQIEYYFSSENLIKDTFLRQNMNEEGWVPVKLIASFSKVQRLTEN 421

Query: 301 IQTILDALQSSTVVEVKGDTVRRRHDYDRWIIRPGQVPNISGPLSPLSPGSSNQDMLAGG 360
           IQTILDALQSSTVVEVKGDTVRRR+DY+RWIIRPGQVP++SG   PLSPGSSNQDMLA G
Sbjct: 422 IQTILDALQSSTVVEVKGDTVRRRNDYERWIIRPGQVPDLSG--LPLSPGSSNQDMLAAG 481

Query: 361 VQGIALENVNHKVSEGGQGEVHVDEASHGDSNTKAGSEHSSSERS 405
           VQGIALEN+NH+  EGGQG+        G  NT AGS+HSSSERS
Sbjct: 482 VQGIALENINHRGFEGGQGDDRT-----GQVNTMAGSDHSSSERS 518

[Close]

BLAST of IVF0012482 vs. NCBI nr
Match: XP_022949956.1 (la-related protein 1C-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 659 bits (1701), Expect = 2.52e-234
Identity = 349/415 (84.10%), Postives = 376/415 (90.60%), Query Frame = 0


Query: 1   MGAVSWPALSESAKATPKSSSDSLKSLGDGSTGAQGTGTSSSAPSNKEGNNDVSPNPDST 60
           MGAVSWPALSESAK TPKSSSDS+KSLGDGS G QGTGTSSS+ SNKEGNNDVSPNPDST
Sbjct: 122 MGAVSWPALSESAKGTPKSSSDSIKSLGDGSAGVQGTGTSSSS-SNKEGNNDVSPNPDST 181

Query: 61  LAHPITSRQKSMRRNGSSNSYNSNLPQQSAPSSPVIDTAPNNSSKDRTQRTTFVSSQSHN 120
           L HPITSRQKS+RRNGS++SYNS L QQSAPSSPVID APN+SS+D+TQRT F+SSQSHN
Sbjct: 182 LTHPITSRQKSLRRNGSNSSYNSALSQQSAPSSPVIDPAPNSSSRDQTQRTAFISSQSHN 241

Query: 121 DHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNYNAQPHRVVHRF 180
           DHGHQQPR+SFRSRGGGSHPRGDNSHHHNY SRRDHDRGNQDWNSNRN+NAQPHRVVHRF
Sbjct: 242 DHGHQQPRSSFRSRGGGSHPRGDNSHHHNYSSRRDHDRGNQDWNSNRNFNAQPHRVVHRF 301

Query: 181 IRPSPPPPPNTTGYISSPTMRAIGGPLPFPDFAPPVVYIGPPPP-----EALRGVPFVAP 240
           IRP PPPPPNTTG+ISSPTMR IGGPLPFPDF PPVVYIGPPPP     EALRGVPFVAP
Sbjct: 302 IRPPPPPPPNTTGFISSPTMRPIGGPLPFPDFVPPVVYIGPPPPPPPPPEALRGVPFVAP 361

Query: 241 ISPNAMFFHGPDPQLYAMIVSQIEYYFSGENLIKDTFLRQNMNEEGWVPVKLIASFSKVQ 300
           I PNAMFFHGPDPQLYAMIVSQIEYYFSGENL+KDTFLRQ M+E+GWVPV+LIA+FSKV+
Sbjct: 362 IPPNAMFFHGPDPQLYAMIVSQIEYYFSGENLVKDTFLRQKMDEDGWVPVRLIATFSKVK 421

Query: 301 RLTENIQTILDALQSSTVVEVKGDTVRRRHDYDRWIIRPGQVPNISGPLSPLSPGSSNQD 360
           RLTENIQTILDALQSST+VEVKGD VRRR+DYDRWIIRPGQVPNI+ PLSP+S   SNQD
Sbjct: 422 RLTENIQTILDALQSSTLVEVKGDKVRRRNDYDRWIIRPGQVPNIAAPLSPVS---SNQD 481

Query: 361 MLAGGVQGIALENVNHKVSEGGQGEVHVDEASHGDS-----NTKAGSEHSSSERS 405
           MLA GVQGIALEN+NH+ SEGGQG+VHV+    GD      NTKAG + SSSERS
Sbjct: 482 MLAAGVQGIALENINHRDSEGGQGDVHVEAQPCGDDRPGQVNTKAGPDCSSSERS 532

[Close]

BLAST of IVF0012482 vs. NCBI nr
Match: XP_022949955.1 (la-related protein 1C-like isoform X1 [Cucurbita moschata] >KAG7034073.1 La-related protein 1C, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 654 bits (1686), Expect = 7.92e-232
Identity = 351/430 (81.63%), Postives = 377/430 (87.67%), Query Frame = 0


Query: 1   MGAVSWPALSESAKATPKSSSDSLKSLGDGSTGAQGTGTSSSAPSNKEGNNDVSPNPDST 60
           MGAVSWPALSESAK TPKSSSDS+KSLGDGS G QGTGTSSS+ SNKEGNNDVSPNPDST
Sbjct: 122 MGAVSWPALSESAKGTPKSSSDSIKSLGDGSAGVQGTGTSSSS-SNKEGNNDVSPNPDST 181

Query: 61  LAHPITSRQKSMRRNGSSNSYNSNLPQQSAPSSPVIDTAPNNSSKDRTQRTTFVSSQSHN 120
           L HPITSRQKS+RRNGS++SYNS L QQSAPSSPVID APN+SS+D+TQRT F+SSQSHN
Sbjct: 182 LTHPITSRQKSLRRNGSNSSYNSALSQQSAPSSPVIDPAPNSSSRDQTQRTAFISSQSHN 241

Query: 121 DHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNYNAQPHRVVHRF 180
           DHGHQQPR+SFRSRGGGSHPRGDNSHHHNY SRRDHDRGNQDWNSNRN+NAQPHRVVHRF
Sbjct: 242 DHGHQQPRSSFRSRGGGSHPRGDNSHHHNYSSRRDHDRGNQDWNSNRNFNAQPHRVVHRF 301

Query: 181 IRPSPPPPPNTTGYISSPTMRAIGGPLPFPDFAPPVVYIGPPPP-----EALRGVPFVAP 240
           IRP PPPPPNTTG+ISSPTMR IGGPLPFPDF PPVVYIGPPPP     EALRGVPFVAP
Sbjct: 302 IRPPPPPPPNTTGFISSPTMRPIGGPLPFPDFVPPVVYIGPPPPPPPPPEALRGVPFVAP 361

Query: 241 ISPNAMFFHGPDPQLYAMIVSQIEYYFSGENLIKDTFLRQNMNEEGWVPVKLIASFSKVQ 300
           I PNAMFFHGPDPQLYAMIVSQIEYYFSGENL+KDTFLRQ M+E+GWVPV+LIA+FSKV+
Sbjct: 362 IPPNAMFFHGPDPQLYAMIVSQIEYYFSGENLVKDTFLRQKMDEDGWVPVRLIATFSKVK 421

Query: 301 RLTENIQTILDALQSSTVVEVKGDTVRRRHDYDRWIIRPGQVPNISGPLSPLSPGSSNQD 360
           RLTENIQTILDALQSST+VEVKGD VRRR+DYDRWIIRPGQVPNI+ PLSP+S   SNQD
Sbjct: 422 RLTENIQTILDALQSSTLVEVKGDKVRRRNDYDRWIIRPGQVPNIAAPLSPVS---SNQD 481

Query: 361 MLAGGVQGIALENVNHKVSEGGQGEVHVDEASH--------------------GDSNTKA 405
           MLA GVQGIALEN+NH+ SEGGQG+VHV EA H                    G  NTKA
Sbjct: 482 MLAAGVQGIALENINHRDSEGGQGDVHV-EALHSRRPSGNLSMQAQPCGDDRPGQVNTKA 541

[Close]

BLAST of IVF0012482 vs. TAIR 10
Match: AT5G66100.1 (winged-helix DNA-binding transcription factor family protein )

HSP 1 Score: 165.6 bits (418), Expect = 8.2e-41
Identity = 141/380 (37.11%), Postives = 210/380 (55.26%), Query Frame = 0


Query: 1   MGAV-SWPALSESAKAT--PKSSSDSLKSLGDGSTGAQGTGTSSSAPSNKEGNNDVSPNP 60
           MGA  SWPALS SA+++     S D+ K   DGS       +SS  P     N   + N 
Sbjct: 95  MGAAESWPALSLSARSSSIKSPSLDASKPFPDGS-------SSSIPPPQATSNTSTNANA 154

Query: 61  DSTLAHPITSRQKSMRRNGSSNSYNSNLPQQSAPSSPVIDTAPNNSSKDRTQRTTFVSSQ 120
            S+++   TS + S   N     +  N    S+ +S  +  A   +++D+       S +
Sbjct: 155 GSSVS--ATSSENSAVNNSQRKPFRRNNNTSSSSTSSNVSNAAPLNTRDQNH-----SQR 214

Query: 121 SHNDHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNYNA-----Q 180
                G    RNS R+R   S+PRG+  HH   G+RR+++ GNQ   S+RNY+      Q
Sbjct: 215 GGGSFGSGNFRNSQRNRNSSSYPRGEGLHH---GNRRNYEHGNQSGFSHRNYSGRDMHLQ 274

Query: 181 PHRVVHRFIRPS-----PPPPPNTTGYISSPTMRAIGGPLPFPDFAPPVVYIGP-PPPEA 240
           P R V   IRP      P  P ++  Y+++P + + GGP+ +PD+A  V    P P P  
Sbjct: 275 PQRGV-GMIRPQMLMGPPSFPASSAQYMAAPQLGSYGGPIIYPDYAQHVFMPHPSPDPMG 334

Query: 241 LRGVPFVAPISPNAMFFHGPDPQLYAMIVSQIEYYFSGENLIKDTFLRQNMNEEGWVPVK 300
           L G PF  P+ P  M+F   D  LY  I++Q+EYYFS +NL +D  LR  MN+EGWVPV+
Sbjct: 335 LVG-PF--PLQP--MYFRNFDAILYNKILTQVEYYFSADNLSRDEHLRDQMNDEGWVPVR 394

Query: 301 LIASFSKVQRLTENIQTILDALQSSTVVEVKGDTVRRRHDYDRWIIRPGQVPNISGPLSP 360
           +IA+F ++  LT NIQTIL+AL+SS VVE++G+T+RRR D+D++++   + P+ SGP   
Sbjct: 395 VIAAFRRLAELTNNIQTILEALRSSEVVEIQGETLRRRGDWDKYLL--PREPSRSGP--- 445

Query: 361 LSPGSSNQDMLAGGVQGIAL 367
            + G+SN   L   ++ + L
Sbjct: 455 -AAGASNNASLVSQIESMTL 445

[Close]

BLAST of IVF0012482 vs. TAIR 10
Match: AT4G35890.1 (winged-helix DNA-binding transcription factor family protein )

HSP 1 Score: 157.9 bits (398), Expect = 1.7e-38
Identity = 147/424 (34.67%), Postives = 221/424 (52.12%), Query Frame = 0


Query: 1   MGAVSWPALSESAKA-TPKSSSDSLKSLGDGSTGAQGTGT--------SSSAPSNKEGNN 60
           MGA SWPALSE+ KA + KSSSDSLKSLGD  + +  + +        ++S P+ K+   
Sbjct: 130 MGASSWPALSETTKAPSNKSSSDSLKSLGDVPSSSSASSSVPVTQGIANASVPAPKQAGR 189

Query: 61  DVSPNPDSTLAHPITSRQKSMR-RNGSSNSYNSNLPQQSAPSSPVIDTAPNNSSKDRTQR 120
             +PNP      P  SRQ+S + RNG+S S N  + Q SA  S     + N S + + Q+
Sbjct: 190 -ANPNPT-----PNHSRQRSFKQRNGASGSANGTVSQPSAQGSFTELPSHNPSPRGQNQK 249

Query: 121 TTFVSSQSHNDHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNY- 180
             F +SQ+H    +   R+S+R++ G        +HH ++G RR+ + GNQ+W   R++ 
Sbjct: 250 NGF-ASQNHGGTENPSQRDSYRNQNG--------NHHQSHGGRRNQEHGNQNWTFQRSFN 309

Query: 181 ----NAQPHRVVHRFIR-PSPPPPPNTTGYISSPTMRAIGGPLPFPDFAPPVVYIGPPPP 240
               NAQ  R    F+R PSP   P      + P        +PFP       Y      
Sbjct: 310 GREGNAQSQRGTPAFVRHPSPTVQPIPQFMAAQP----FPSHIPFPTELAQSSY------ 369

Query: 241 EALRGVPFVAPISPNAMFF-HGPDPQLYAMIVSQIEYYFSGENLIKDTFLRQNMNEEGWV 300
                +P++ PI     FF H  DP L+  +  QI+YYFS ENLI D +LR  MN EG+V
Sbjct: 370 --YPRMPYMTPIPHGPQFFYHYQDPPLHMKLHKQIQYYFSDENLITDIYLRGFMNNEGFV 429

Query: 301 PVKLIASFSKVQRLTENIQTILDALQSSTVVEVKGDTVRRRHDYDRWIIRPGQVPNISGP 360
           P++++A F KV  LT+NIQ I++ALQ+S  VEV+GD +R+R ++  W++R  + P  SGP
Sbjct: 430 PLRVVAGFKKVAELTDNIQQIVEALQNSPHVEVQGDFIRKRDNWQNWVLR--RNPTGSGP 489

Query: 361 LSPLSPGSSNQDMLAGGVQGIALENVNHKVSEGGQGEVHVDEASHGD----SNTKAGSEH 404
            S         D +A  +  ++++  +     G   ++   EA   D    S+T   S H
Sbjct: 490 QS-----VDRADAVAKRLGNLSVDQSSADPIGGSSSQLQPTEALSDDQQQSSSTAPVSNH 519

[Close]

BLAST of IVF0012482 vs. TAIR 10
Match: AT5G21160.1 (LA RNA-binding protein )

HSP 1 Score: 87.4 bits (215), Expect = 2.8e-17
Identity = 76/209 (36.36%), Postives = 106/209 (50.72%), Query Frame = 0


Query: 208 PFPDFAPPVVYIGPPPPEALRG--VPFVAPISPNAMFFHGP---DPQ---LYAMIVSQIE 267
           P P F  PV Y+  PPP A+RG   P  AP   N     GP    P+   L   ++ Q+E
Sbjct: 232 PGPGFPGPVYYLPGPPPGAIRGPYPPRFAPYPVN----QGPPILSPEKLDLRDRVLKQVE 291

Query: 268 YYFSGENLIKDTFLRQNMNEEGWVPVKLIASFSKVQRLTENIQTILDALQSSTVVEVKGD 327
           YYFS ENL  D +L   M+EEGWVP K+IA F +V+ +T ++  I+ AL  S  VEV+GD
Sbjct: 292 YYFSDENLENDHYLISLMDEEGWVPTKIIAGFKRVKAMTMDVDFIVYALGFSNSVEVQGD 351

Query: 328 TVRRRHDYDRWIIRPGQVPNIS----GPLSPLSPGS-SNQDMLAGGVQGIALENVNHKVS 387
            +R+R  +  WI  P    + S    G     SP S ++ D      +G +   V+   S
Sbjct: 352 QIRKRDKWSDWI--PASKKSTSAETIGDGDKDSPKSITSGDNFGNPSKGSSKPTVSDFSS 411

Query: 388 EGGQGEVHVDEASHGDSNTKAGSEHSSSE 404
           EG Q        S   +N K+G+  SS++
Sbjct: 412 EGAQ--------SSRTNNYKSGNLKSSAD 426

[Close]

BLAST of IVF0012482 vs. TAIR 10
Match: AT5G21160.3 (LA RNA-binding protein )

HSP 1 Score: 87.4 bits (215), Expect = 2.8e-17
Identity = 76/209 (36.36%), Postives = 106/209 (50.72%), Query Frame = 0


Query: 208 PFPDFAPPVVYIGPPPPEALRG--VPFVAPISPNAMFFHGP---DPQ---LYAMIVSQIE 267
           P P F  PV Y+  PPP A+RG   P  AP   N     GP    P+   L   ++ Q+E
Sbjct: 232 PGPGFPGPVYYLPGPPPGAIRGPYPPRFAPYPVN----QGPPILSPEKLDLRDRVLKQVE 291

Query: 268 YYFSGENLIKDTFLRQNMNEEGWVPVKLIASFSKVQRLTENIQTILDALQSSTVVEVKGD 327
           YYFS ENL  D +L   M+EEGWVP K+IA F +V+ +T ++  I+ AL  S  VEV+GD
Sbjct: 292 YYFSDENLENDHYLISLMDEEGWVPTKIIAGFKRVKAMTMDVDFIVYALGFSNSVEVQGD 351

Query: 328 TVRRRHDYDRWIIRPGQVPNIS----GPLSPLSPGS-SNQDMLAGGVQGIALENVNHKVS 387
            +R+R  +  WI  P    + S    G     SP S ++ D      +G +   V+   S
Sbjct: 352 QIRKRDKWSDWI--PASKKSTSAETIGDGDKDSPKSITSGDNFGNPSKGSSKPTVSDFSS 411

Query: 388 EGGQGEVHVDEASHGDSNTKAGSEHSSSE 404
           EG Q        S   +N K+G+  SS++
Sbjct: 412 EGAQ--------SSRTNNYKSGNLKSSAD 426

[Close]

BLAST of IVF0012482 vs. TAIR 10
Match: AT5G21160.2 (LA RNA-binding protein )

HSP 1 Score: 87.4 bits (215), Expect = 2.8e-17
Identity = 76/209 (36.36%), Postives = 106/209 (50.72%), Query Frame = 0


Query: 208 PFPDFAPPVVYIGPPPPEALRG--VPFVAPISPNAMFFHGP---DPQ---LYAMIVSQIE 267
           P P F  PV Y+  PPP A+RG   P  AP   N     GP    P+   L   ++ Q+E
Sbjct: 232 PGPGFPGPVYYLPGPPPGAIRGPYPPRFAPYPVN----QGPPILSPEKLDLRDRVLKQVE 291

Query: 268 YYFSGENLIKDTFLRQNMNEEGWVPVKLIASFSKVQRLTENIQTILDALQSSTVVEVKGD 327
           YYFS ENL  D +L   M+EEGWVP K+IA F +V+ +T ++  I+ AL  S  VEV+GD
Sbjct: 292 YYFSDENLENDHYLISLMDEEGWVPTKIIAGFKRVKAMTMDVDFIVYALGFSNSVEVQGD 351

Query: 328 TVRRRHDYDRWIIRPGQVPNIS----GPLSPLSPGS-SNQDMLAGGVQGIALENVNHKVS 387
            +R+R  +  WI  P    + S    G     SP S ++ D      +G +   V+   S
Sbjct: 352 QIRKRDKWSDWI--PASKKSTSAETIGDGDKDSPKSITSGDNFGNPSKGSSKPTVSDFSS 411

Query: 388 EGGQGEVHVDEASHGDSNTKAGSEHSSSE 404
           EG Q        S   +N K+G+  SS++
Sbjct: 412 EGAQ--------SSRTNNYKSGNLKSSAD 426

The following BLAST results are available for this feature:

BLAST of IVF0012482 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RWR2	1.1e-39	37.11	La-related protein 1B OS=Arabidopsis thaliana OX=3702 GN=LARP1B PE=1 SV=2	[more]
Q94K80	2.4e-37	34.67	La-related protein 1C OS=Arabidopsis thaliana OX=3702 GN=LARP1C PE=1 SV=1	[more]
Q940X9	4.0e-16	36.36	La-related protein 1A OS=Arabidopsis thaliana OX=3702 GN=LARP1A PE=1 SV=1	[more]
Q6PKG0	2.2e-14	38.26	La-related protein 1 OS=Homo sapiens OX=9606 GN=LARP1 PE=1 SV=2	[more]
D5MCN2	5.4e-13	37.21	La-related protein 1 OS=Caenorhabditis elegans OX=6239 GN=larp-1 PE=4 SV=2	[more]

BLAST of IVF0012482 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SHL1	1.6e-222	99.75	La-related protein 1C OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25...	[more]
A0A1S3B2V3	1.6e-222	99.75	la-related protein 1C OS=Cucumis melo OX=3656 GN=LOC103485155 PE=4 SV=1	[more]
A0A6J1GDH3	4.2e-186	84.10	la-related protein 1C-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453...	[more]
A0A6J1GE82	2.3e-184	81.63	la-related protein 1C-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453...	[more]
A0A6J1IMA2	1.1e-181	82.54	la-related protein 1C-like OS=Cucurbita maxima OX=3661 GN=LOC111477768 PE=4 SV=1	[more]

BLAST of IVF0012482 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008440860.1	3.42e-282	99.75	PREDICTED: la-related protein 1C [Cucumis melo] >KAA0025648.1 la-related protein...	[more]
XP_004134846.1	5.86e-272	96.04	la-related protein 1C [Cucumis sativus] >KAE8647616.1 hypothetical protein Csa_0...	[more]
XP_038881160.1	3.77e-242	88.89	la-related protein 1C-like [Benincasa hispida]	[more]
XP_022949956.1	2.52e-234	84.10	la-related protein 1C-like isoform X2 [Cucurbita moschata]	[more]
XP_022949955.1	7.92e-232	81.63	la-related protein 1C-like isoform X1 [Cucurbita moschata] >KAG7034073.1 La-rela...	[more]

BLAST of IVF0012482 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66100.1	8.2e-41	37.11	winged-helix DNA-binding transcription factor family protein	[more]
AT4G35890.1	1.7e-38	34.67	winged-helix DNA-binding transcription factor family protein	[more]
AT5G21160.1	2.8e-17	36.36	LA RNA-binding protein	[more]
AT5G21160.3	2.8e-17	36.36	LA RNA-binding protein	[more]
AT5G21160.2	2.8e-17	36.36	LA RNA-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006630	La-type HTH domain	SMART	SM00715	la	coord: 248..324 e-value: 1.4E-27 score: 107.6
IPR006630	La-type HTH domain	PFAM	PF05383	La	coord: 254..309 e-value: 9.4E-23 score: 80.0
IPR006630	La-type HTH domain	PROSITE	PS50961	HTH_LA	coord: 244..333 score: 25.883427
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 244..331 e-value: 7.5E-31 score: 107.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..133
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..168
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 368..405
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 377..405
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..162
None	No IPR available	PANTHER	PTHR22792	LUPUS LA PROTEIN-RELATED	coord: 1..393
None	No IPR available	PANTHER	PTHR22792:SF132	LA-RELATED PROTEIN 1B	coord: 1..393
None	No IPR available	CDD	cd07323	LAM	coord: 251..323 e-value: 1.95797E-32 score: 115.322
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 242..332

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0012482.3	IVF0012482.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0003723	RNA binding