IVF0012455 (gene) Melon (IVF77) v1

Overview


Name	IVF0012455
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Cysteine-rich receptor-like protein kinase
Location	chr08: 5990412 .. 5990603 (-)
RNA-Seq Expression	IVF0012455
Synteny	IVF0012455

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCGGTGGTTTTGATGCTGAGTAGTTTCTCTCTCACTCTCTCCGTGCCCTCCGACCCGGCATTCTTTATGCACAGTAATATTGAAGAATCTAACAGTGTGGTAAAACCAAATGGTGGTCATATGAAAAGCACATCTCTTGAGCCATCACTCAATGAAGTTTCAATTACTGAGCTCCGACCTCGCTAG

mRNA sequence

ATGGCTTCGGTGGTTTTGATGCTGAGTAGTTTCTCTCTCACTCTCTCCGTGCCCTCCGACCCGGCATTCTTTATGCACAGTAATATTGAAGAATCTAACAGTGTGGTAAAACCAAATGGTGGTCATATGAAAAGCACATCTCTTGAGCCATCACTCAATGAAGTTTCAATTACTGAGCTCCGACCTCGCTAG

Coding sequence (CDS)

ATGGCTTCGGTGGTTTTGATGCTGAGTAGTTTCTCTCTCACTCTCTCCGTGCCCTCCGACCCGGCATTCTTTATGCACAGTAATATTGAAGAATCTAACAGTGTGGTAAAACCAAATGGTGGTCATATGAAAAGCACATCTCTTGAGCCATCACTCAATGAAGTTTCAATTACTGAGCTCCGACCTCGCTAG

Protein sequence

MASVVLMLSSFSLTLSVPSDPAFFMHSNIEESNSVVKPNGGHMKSTSLEPSLNEVSITELRPR

Homology

[Close]

BLAST of IVF0012455 vs. ExPASy TrEMBL
Match: A0A5A7SHP3 (Cysteine-rich repeat secretory protein 38-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001240 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 4.1e-24
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0


Query: 1   MASVVLMLSSFSLTLSVPSDPAFFMHSNIEESNSVVKPNGGHMKSTSLEPSLNEVSITEL 60
           MASVVLMLSSFSLTLSVPSDPAFFMHSNIEESNSVVKPNGGHMKSTSLEPSLNEVSITEL
Sbjct: 371 MASVVLMLSSFSLTLSVPSDPAFFMHSNIEESNSVVKPNGGHMKSTSLEPSLNEVSITEL 430

Query: 61  RPR 64
           RPR
Sbjct: 431 RPR 433

[Close]

BLAST of IVF0012455 vs. ExPASy TrEMBL
Match: A0A0A0KMG4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G505980 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 3.1e-19
Identity = 54/63 (85.71%), Postives = 59/63 (93.65%), Query Frame = 0


Query: 1  MASVVLMLSSFSLTLSVPSDPAFFMHSNIEESNSVVKPNGGHMKSTSLEPSLNEVSITEL 60
          MASVVLML+S S TLSVPS+PAFFMHSNIEE+N+VVKPN GHMKSTSLEPS+NEVSIT L
Sbjct: 1  MASVVLMLNSSSFTLSVPSEPAFFMHSNIEEANNVVKPNDGHMKSTSLEPSVNEVSITVL 60

Query: 61 RPR 64
          RPR
Sbjct: 61 RPR 63

[Close]

BLAST of IVF0012455 vs. ExPASy TrEMBL
Match: A0A6J1KV13 (putative receptor-like protein kinase At4g00960 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111496690 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 4.9e-09
Identity = 40/64 (62.50%), Postives = 50/64 (78.12%), Query Frame = 0


Query: 1   MASVVLMLSSFSLTLSVPSDPAFFMHSNIEESNSVVKPNGG-HMKSTSLEPSLNEVSITE 60
           MASVV MLSS SLTL +PS PAFFMHS   ESN+++KP+GG H ++ SL+ S N+ SI+E
Sbjct: 619 MASVVTMLSSSSLTLPIPSRPAFFMHSITGESNTMLKPDGGTHSEARSLQNSNNDASISE 678

Query: 61  LRPR 64
           L PR
Sbjct: 679 LLPR 682

[Close]

BLAST of IVF0012455 vs. ExPASy TrEMBL
Match: A0A6J1KMP7 (cysteine-rich receptor-like protein kinase 29 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496690 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 4.9e-09
Identity = 40/64 (62.50%), Postives = 50/64 (78.12%), Query Frame = 0


Query: 1   MASVVLMLSSFSLTLSVPSDPAFFMHSNIEESNSVVKPNGG-HMKSTSLEPSLNEVSITE 60
           MASVV MLSS SLTL +PS PAFFMHS   ESN+++KP+GG H ++ SL+ S N+ SI+E
Sbjct: 622 MASVVTMLSSSSLTLPIPSRPAFFMHSITGESNTMLKPDGGTHSEARSLQNSNNDASISE 681

Query: 61  LRPR 64
           L PR
Sbjct: 682 LLPR 685

[Close]

BLAST of IVF0012455 vs. ExPASy TrEMBL
Match: A0A6J1CKX7 (putative receptor-like protein kinase At4g00960 OS=Momordica charantia OX=3673 GN=LOC111012379 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 6.4e-09
Identity = 42/71 (59.15%), Postives = 51/71 (71.83%), Query Frame = 0


Query: 1   MASVVLMLSSFSLTLSVPSDPAFFMHSNIEESNSVVKPN-------GGHMKSTSLEP-SL 60
           MASV+LMLSS SLTL VPS+PAFFMHS  +ESN+++K +         H +ST L+P S 
Sbjct: 611 MASVILMLSSSSLTLLVPSEPAFFMHSKTDESNTLLKSDHRLEMIKASHSESTPLQPYSE 670

Query: 61  NEVSITELRPR 64
           NE SITEL PR
Sbjct: 671 NEASITELHPR 681

[Close]

BLAST of IVF0012455 vs. NCBI nr
Match: KAA0025670.1 (cysteine-rich repeat secretory protein 38-like [Cucumis melo var. makuwa] >TYK12542.1 cysteine-rich repeat secretory protein 38-like [Cucumis melo var. makuwa])

HSP 1 Score: 120 bits (302), Expect = 1.35e-30
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0


Query: 1   MASVVLMLSSFSLTLSVPSDPAFFMHSNIEESNSVVKPNGGHMKSTSLEPSLNEVSITEL 60
           MASVVLMLSSFSLTLSVPSDPAFFMHSNIEESNSVVKPNGGHMKSTSLEPSLNEVSITEL
Sbjct: 371 MASVVLMLSSFSLTLSVPSDPAFFMHSNIEESNSVVKPNGGHMKSTSLEPSLNEVSITEL 430

Query: 61  RPR 63
           RPR
Sbjct: 431 RPR 433

[Close]

BLAST of IVF0012455 vs. NCBI nr
Match: XP_004135028.1 (cysteine-rich receptor-like protein kinase 26 [Cucumis sativus])

HSP 1 Score: 104 bits (260), Expect = 2.08e-25
Identity = 54/63 (85.71%), Postives = 59/63 (93.65%), Query Frame = 0


Query: 1   MASVVLMLSSFSLTLSVPSDPAFFMHSNIEESNSVVKPNGGHMKSTSLEPSLNEVSITEL 60
           MASVVLML+S S TLSVPS+PAFFMHSNIEE+N+VVKPN GHMKSTSLEPS+NEVSIT L
Sbjct: 227 MASVVLMLNSSSFTLSVPSEPAFFMHSNIEEANNVVKPNDGHMKSTSLEPSVNEVSITVL 286

Query: 61  RPR 63
           RPR
Sbjct: 287 RPR 289

[Close]

BLAST of IVF0012455 vs. NCBI nr
Match: XP_023002933.1 (putative receptor-like protein kinase At4g00960 isoform X3 [Cucurbita maxima])

HSP 1 Score: 70.9 bits (172), Expect = 2.51e-12
Identity = 40/64 (62.50%), Postives = 50/64 (78.12%), Query Frame = 0


Query: 1   MASVVLMLSSFSLTLSVPSDPAFFMHSNIEESNSVVKPNGG-HMKSTSLEPSLNEVSITE 60
           MASVV MLSS SLTL +PS PAFFMHS   ESN+++KP+GG H ++ SL+ S N+ SI+E
Sbjct: 619 MASVVTMLSSSSLTLPIPSRPAFFMHSITGESNTMLKPDGGTHSEARSLQNSNNDASISE 678

Query: 61  LRPR 63
           L PR
Sbjct: 679 LLPR 682

[Close]

BLAST of IVF0012455 vs. NCBI nr
Match: XP_023002931.1 (cysteine-rich receptor-like protein kinase 29 isoform X1 [Cucurbita maxima])

HSP 1 Score: 70.9 bits (172), Expect = 2.51e-12
Identity = 40/64 (62.50%), Postives = 50/64 (78.12%), Query Frame = 0


Query: 1   MASVVLMLSSFSLTLSVPSDPAFFMHSNIEESNSVVKPNGG-HMKSTSLEPSLNEVSITE 60
           MASVV MLSS SLTL +PS PAFFMHS   ESN+++KP+GG H ++ SL+ S N+ SI+E
Sbjct: 622 MASVVTMLSSSSLTLPIPSRPAFFMHSITGESNTMLKPDGGTHSEARSLQNSNNDASISE 681

Query: 61  LRPR 63
           L PR
Sbjct: 682 LLPR 685

[Close]

BLAST of IVF0012455 vs. NCBI nr
Match: XP_022142209.1 (putative receptor-like protein kinase At4g00960 [Momordica charantia])

HSP 1 Score: 70.5 bits (171), Expect = 3.43e-12
Identity = 42/71 (59.15%), Postives = 51/71 (71.83%), Query Frame = 0


Query: 1   MASVVLMLSSFSLTLSVPSDPAFFMHSNIEESNSVVKPN-------GGHMKSTSLEP-SL 60
           MASV+LMLSS SLTL VPS+PAFFMHS  +ESN+++K +         H +ST L+P S 
Sbjct: 611 MASVILMLSSSSLTLLVPSEPAFFMHSKTDESNTLLKSDHRLEMIKASHSESTPLQPYSE 670

Query: 61  NEVSITELRPR 63
           NE SITEL PR
Sbjct: 671 NEASITELHPR 681

[Close]

BLAST of IVF0012455 vs. TAIR 10
Match: AT4G38830.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 26 )

HSP 1 Score: 42.0 bits (97), Expect = 2.1e-04
Identity = 32/64 (50.00%), Postives = 38/64 (59.38%), Query Frame = 0


Query: 1   MASVVLMLSSFSLTLSVPSDPAFFMHSN-IEESNSVVKPNGGHMKSTSLEPSLNEVSITE 60
           MASVVLML   ++ LS PS PAFF HSN + +S+S +    GH   TS     N  S TE
Sbjct: 611 MASVVLMLDGHTIALSEPSKPAFFSHSNAVSDSSSSL----GHNAKTS-----NYNSNTE 665

Query: 61  LRPR 64
           L PR
Sbjct: 671 LYPR 665

[Close]

BLAST of IVF0012455 vs. TAIR 10
Match: AT4G21400.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 28 )

HSP 1 Score: 40.0 bits (92), Expect = 8.0e-04
Identity = 29/66 (43.94%), Postives = 38/66 (57.58%), Query Frame = 0


Query: 1   MASVVLMLSSFSLTLSVPSDPAFFMHSNIEESNSVVKPNGGHMKSTSLEP---SLNEVSI 60
           M SV LML+S+S TL  PS PAF + S +   N           S+S EP   SLN+V++
Sbjct: 656 MDSVALMLNSYSYTLPTPSRPAFALESVMPSMN----------VSSSTEPLLMSLNDVTV 711

Query: 61  TELRPR 64
           +EL PR
Sbjct: 716 SELSPR 711

The following BLAST results are available for this feature:

BLAST of IVF0012455 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0012455 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SHP3	4.1e-24	100.00	Cysteine-rich repeat secretory protein 38-like OS=Cucumis melo var. makuwa OX=11...	[more]
A0A0A0KMG4	3.1e-19	85.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G505980 PE=4 SV=1	[more]
A0A6J1KV13	4.9e-09	62.50	putative receptor-like protein kinase At4g00960 isoform X3 OS=Cucurbita maxima O...	[more]
A0A6J1KMP7	4.9e-09	62.50	cysteine-rich receptor-like protein kinase 29 isoform X1 OS=Cucurbita maxima OX=...	[more]
A0A6J1CKX7	6.4e-09	59.15	putative receptor-like protein kinase At4g00960 OS=Momordica charantia OX=3673 G...	[more]

BLAST of IVF0012455 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0025670.1	1.35e-30	100.00	cysteine-rich repeat secretory protein 38-like [Cucumis melo var. makuwa] >TYK12...	[more]
XP_004135028.1	2.08e-25	85.71	cysteine-rich receptor-like protein kinase 26 [Cucumis sativus]	[more]
XP_023002933.1	2.51e-12	62.50	putative receptor-like protein kinase At4g00960 isoform X3 [Cucurbita maxima]	[more]
XP_023002931.1	2.51e-12	62.50	cysteine-rich receptor-like protein kinase 29 isoform X1 [Cucurbita maxima]	[more]
XP_022142209.1	3.43e-12	59.15	putative receptor-like protein kinase At4g00960 [Momordica charantia]	[more]

BLAST of IVF0012455 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38830.1	2.1e-04	50.00	cysteine-rich RLK (RECEPTOR-like protein kinase) 26	[more]
AT4G21400.1	8.0e-04	43.94	cysteine-rich RLK (RECEPTOR-like protein kinase) 28	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..63

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0012455.1	IVF0012455.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity