Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTATTATATTCTTCATTGCCCTCCACCTGCAAGATGGCAAGTGGTTGGAAGAGAGTGGCTTTGTTATCTTTGTTGTGTTTTCACGTTCTTGTGTACAATGTGGTTGCGAAGGAAGATGGAAAGGAAGAGAAGTTTCTGTTCTTTGGCAAGAGTGGTGGACTAGGGGGTGGATTTGGTGGTGGGAGTGGATTCGGAGGTGGTTTTGGAGGAGGTGGAGGTGGCGGTGGAGGCGGCGGTGGTGGTGGAGGCGGAGGTTTTGGAGGTGGTGGAGGATATGGAGGAGGTCACGGAATCGGTGGTGGATTTGGTAAAGGTGGCGGTGTTGGTGGCGGAATAGGAGGAGGCGCTGGTGGTGGCGGTGGAGTAGGAGGTGGCATTGGAAAAGGTGGAGGATTAGGTGGCGGTGCAGGAGGTGGGTTTGGAAAAGGTGGAGGTCTAGGAGGTGGTGCTGGTGGCGGGTTTGGTAAAGGTGGTGGACTTGGTGGTGGCATTGGAAAAGGTGGAGGCTTAGGTGGTGGTGCTGGTGCTGGTGGAGGATTTGGAAAAGGTGGTGGACTCGGTGGTGGAATTGGTAAAGGTGGAGGCTTAGGTGGTGGTGCTGGTGCTGGTGGAGGATTTGGAAAAGGTGGTGGACTCGGTGGTGGAATTGGTAAAGGTGGAGGCTTAGGTGGTGGTGCCGGTGGAGGAATTGGTAAAGGTGGTGGACTTGGTGGTGGCATTGGAAAGGGTGGAGGCTTAGGTGGTGGTGCTGGCGGAGGAATTGGTAAAGGTGGTGTAATTGGTAAGGGTGGAGGTCTTGGTGGCGGAGTAGGAGGTGGTGCTGGTGGAGGGTTTGGAAAGGGTGGCGGACTTGGTGGTGGCATTGGAAAAGGTGGAGGTCTAGGTGGTGGAGTTGGAGGTGGTGCTGGTGGAGGGTTTGGAAAAGGTGGTGGACTCGGTGGTGGCATTGGGAAAGGCGGAGGACTAGGTGGTGGAGTTGGAGGTGGTGCTGGTGGAGGTTTTGGCAAGGGTGGAGGACTTGGTGGTGGAATTGGAAAAGGTGGAGGACTTGGTGGTGGTGCTGGTGGAGGGTTTGGCAAAGGTGGAGGACTTGGTGGTGGAATCGGAAAAGGTGGAGGGCTCGGTGGTGGCGCCGGCGGAGGGTTCGGCAAAGGTGGAGGACTTGGTGGTGGAATTGGTAAAGGCGGTGGATTTGGTGGTGGTGCTGGAGGAGGGTTTGGTAAGGGTGGTGGAGTTGGAGGAGGATTCGGTAAGGGCGGAGGATTTGGTGGTGGAGTAGGAGGCGGTGCTGGTGGTGGTGGCGGCGGAGGAGGAGGCGGAGGCGGTGGGGGTGGGGGTGGCTTTGGAAAAGGTGGAGGCTTTGGTAGTGGATTTGGAGCGGGTTCGGTGGTGGTGTTGGTGGAGGTGGCGGAGGAGGCTTTGGTGGTGGTGGCGGATTTGGTGGAGGCGGAATTGGACACCACTAA
mRNA sequence
ATTATTATATTCTTCATTGCCCTCCACCTGCAAGATGGCAAGTGGTTGGAAGAGAGTGGCTTTGTTATCTTTGTTGTGTTTTCACGTTCTTGTGTACAATGTGGTTGCGAAGGAAGATGGAAAGGAAGAGAAGTTTCTGTTCTTTGGCAAGAGTGGTGGACTAGGGGGTGGATTTGGTGGTGGGAGTGGATTCGGAGGTGGTTTTGGAGGAGGTGGAGGTGGCGGTGGAGGCGGCGGTGGTGGTGGAGGCGGAGGTTTTGGAGGTGGTGGAGGATATGGAGGAGGTCACGGAATCGGTGGTGGATTTGGTAAAGGTGGCGGTGTTGGTGGCGGAATAGGAGGAGGCGCTGGTGGTGGCGGTGGAGTAGGAGGTGGCATTGGAAAAGGTGGAGGATTAGGTGGCGGTGCAGGAGGTGGGTTTGGAAAAGGTGGAGGTCTAGGAGGTGGTGCTGGTGGCGGGTTTGGTAAAGGTGGTGGACTTGGTGGTGGCATTGGAAAAGGTGGAGGGCTCGGTGGTGGCGCCGGCGGAGGGTTCGGCAAAGGTGGAGGACTTGGTGGTGGAATTGGTAAAGGCGGTGGATTTGGTGGTGGTGCTGGAGGAGGGTTTGGTAAGGGTGGTGGAGTTGGAGGAGGATTCGGTAAGGGCGGAGGATTTGGTGGTGGAGTAGGAGGCGGTGCTGGTGGTGGTGGCGGCGGAGGAGGAGGCGGAGGCGGTGGGGGTGGGGGTGGCTTTGGAAAAGGTGGAGGCTTTGGTAGTGGCGGAGGAGGCTTTGGTGGTGGTGGCGGATTTGGTGGAGGCGGAATTGGACACCACTAA
Coding sequence (CDS)
ATGGCAAGTGGTTGGAAGAGAGTGGCTTTGTTATCTTTGTTGTGTTTTCACGTTCTTGTGTACAATGTGGTTGCGAAGGAAGATGGAAAGGAAGAGAAGTTTCTGTTCTTTGGCAAGAGTGGTGGACTAGGGGGTGGATTTGGTGGTGGGAGTGGATTCGGAGGTGGTTTTGGAGGAGGTGGAGGTGGCGGTGGAGGCGGCGGTGGTGGTGGAGGCGGAGGTTTTGGAGGTGGTGGAGGATATGGAGGAGGTCACGGAATCGGTGGTGGATTTGGTAAAGGTGGCGGTGTTGGTGGCGGAATAGGAGGAGGCGCTGGTGGTGGCGGTGGAGTAGGAGGTGGCATTGGAAAAGGTGGAGGATTAGGTGGCGGTGCAGGAGGTGGGTTTGGAAAAGGTGGAGGTCTAGGAGGTGGTGCTGGTGGCGGGTTTGGTAAAGGTGGTGGACTTGGTGGTGGCATTGGAAAAGGTGGAGGGCTCGGTGGTGGCGCCGGCGGAGGGTTCGGCAAAGGTGGAGGACTTGGTGGTGGAATTGGTAAAGGCGGTGGATTTGGTGGTGGTGCTGGAGGAGGGTTTGGTAAGGGTGGTGGAGTTGGAGGAGGATTCGGTAAGGGCGGAGGATTTGGTGGTGGAGTAGGAGGCGGTGCTGGTGGTGGTGGCGGCGGAGGAGGAGGCGGAGGCGGTGGGGGTGGGGGTGGCTTTGGAAAAGGTGGAGGCTTTGGTAGTGGCGGAGGAGGCTTTGGTGGTGGTGGCGGATTTGGTGGAGGCGGAATTGGACACCACTAA
Protein sequence
MASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFGGGGGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKGGGLGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGFGGGAGGGFGKGGGVGGGFGKGGGFGGGVGGGAGGGGGGGGGGGGGGGGGFGKGGGFGSGGGGFGGGGGFGGGGIGHH
Homology
BLAST of IVF0012433 vs. ExPASy TrEMBL
Match:
A0A1S4E2X3 (glycine-rich cell wall structural protein 1 OS=Cucumis melo OX=3656 GN=LOC103499434 PE=4 SV=1)
HSP 1 Score: 238.8 bits (608), Expect = 2.5e-59
Identity = 260/280 (92.86%), Postives = 260/280 (92.86%), Query Frame = 0
Query: 1 MASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFGGG 60
MASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFGGG
Sbjct: 22 MASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFGGG 81
Query: 61 GGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKGGG 120
GGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKGGG
Sbjct: 82 GGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKGGG 141
Query: 121 LGGGAGGGFGKGGGLGGGAGGGFGKGGGL-------GGGIGKGGGLGGGAGGGFGKGGGL 180
LGGGAGGGFGKGGGLGGGAGGGFGKGGGL GGGIGKGGGLGGGAGGGFGKGGGL
Sbjct: 142 LGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKVGGGIGKGGGLGGGAGGGFGKGGGL 201
Query: 181 GGGIGKGGGFGGGAGGGFGKGGGVGGGFGKGGGFGGGVGGGAGGGGGGGGGGGGGGGGGF 240
GGGIGKGGGFGGGAGGGFGKGGGVGGGFGKGGGFGGGVGGGAGGGGGGGGGGGGGGGGGF
Sbjct: 202 GGGIGKGGGFGGGAGGGFGKGGGVGGGFGKGGGFGGGVGGGAGGGGGGGGGGGGGGGGGF 261
Query: 241 GKGGGFGS-------------GGGGFGGGGGFGGGGIGHH 261
GKGGGFGS GGGGFGGGGGFGGGGIGHH
Sbjct: 262 GKGGGFGSGFGSGFGGGVGGGGGGGFGGGGGFGGGGIGHH 301
BLAST of IVF0012433 vs. ExPASy TrEMBL
Match:
A0A0A0LIH7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G173020 PE=4 SV=1)
HSP 1 Score: 186.0 bits (471), Expect = 1.9e-43
Identity = 236/285 (82.81%), Postives = 240/285 (84.21%), Query Frame = 0
Query: 1 MASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFGGG 60
MASGWKRVALLSLLCF V+VYNVVAKEDGKEEKFLFFGKSGGLG GFGGGSGFGG GGG
Sbjct: 1 MASGWKRVALLSLLCFQVIVYNVVAKEDGKEEKFLFFGKSGGLGSGFGGGSGFGG--GGG 60
Query: 61 GGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKGGG 120
GGGGGGGGGGGGGGFGGG G+GGGHGIGGGFGKGGGVGGG+GGGAGGG GVGGGIGKGGG
Sbjct: 61 GGGGGGGGGGGGGGFGGGVGFGGGHGIGGGFGKGGGVGGGVGGGAGGGSGVGGGIGKGGG 120
Query: 121 LGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKG 180
LGGG+GGGFGKGGGLGGGAGGGF GKGGGLGGGAGGGFGKGGGLGGGIGKG
Sbjct: 121 LGGGSGGGFGKGGGLGGGAGGGF----------GKGGGLGGGAGGGFGKGGGLGGGIGKG 180
Query: 181 GGF--GGGAGGGFGKGGGVGGGFGKGGGFGGGVGGGAGGGGGGGGGGGGGGGGGFGKGGG 240
GG GGGAGGGFGKGGGVGGGFGKGGGFGGGVGGGA GGGGGGGGGGGGGGGGFG GGG
Sbjct: 181 GGLGGGGGAGGGFGKGGGVGGGFGKGGGFGGGVGGGA-GGGGGGGGGGGGGGGGFGNGGG 240
Query: 241 FG-----------------------SGGGGFGGGGGFGGGGIGHH 261
FG GGGGFGGGGGFGGGGIGHH
Sbjct: 241 FGGGFGKGFGGGIGGGSGSGFGGGVGGGGGFGGGGGFGGGGIGHH 272
BLAST of IVF0012433 vs. ExPASy TrEMBL
Match:
A0A5D3BTN6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold772G00390 PE=4 SV=1)
HSP 1 Score: 181.0 bits (458), Expect = 6.3e-42
Identity = 241/274 (87.96%), Postives = 243/274 (88.69%), Query Frame = 0
Query: 1 MASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFGGG 60
MASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFGGG
Sbjct: 1 MASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFGGG 60
Query: 61 GGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKGGG 120
GGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKGGG
Sbjct: 61 GGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKGGG 120
Query: 121 LGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGG--GAGGGFGKGGGLGGGIG 180
LGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGG GAGGGFGKGGGLGGGIG
Sbjct: 121 LGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGAGGGFGKGGGLGGGIG 180
Query: 181 KGGGFGG--GAGGGFGKGGGVGGGFGKGGGFGGGVGGGAGGGG------GGGGGGGGGGG 240
KGGG GG GAGGGFGKGGG+GGG GKGGG GGG GGG G GG G GGG GGG G
Sbjct: 181 KGGGLGGGAGAGGGFGKGGGLGGGIGKGGGLGGGAGGGIGKGGGLGGGIGKGGGLGGGAG 240
Query: 241 GGFGKGGGFGSGGG-----GFGGGGGFG-GGGIG 259
GG GKGG G GGG G G GGGFG GGG+G
Sbjct: 241 GGIGKGGVIGKGGGLGGGVGGGAGGGFGKGGGLG 274
BLAST of IVF0012433 vs. ExPASy TrEMBL
Match:
A0A6J1H3F4 (glycine-rich cell wall structural protein-like isoform X8 OS=Cucurbita moschata OX=3662 GN=LOC111460136 PE=4 SV=1)
HSP 1 Score: 110.9 bits (276), Expect = 7.9e-21
Identity = 228/340 (67.06%), Postives = 240/340 (70.59%), Query Frame = 0
Query: 1 MASGWKRVALLSLLCFHVLVYNVVAKE--DGKEEKFLFFGKSGGLGGGFGGGSGFGGGFG 60
MA+G RVALLSL CF+VLV++VVAK+ +G+EEKFLFFGKSGGLG GFGGGSGFGGGFG
Sbjct: 1 MATGCNRVALLSLFCFYVLVFSVVAKDVTNGEEEKFLFFGKSGGLGVGFGGGSGFGGGFG 60
Query: 61 GGGGGGG-----------GGGGGGGGGFGGGGGYGG--------GHGIGGGFGKGGGVGG 120
GGGGGGG GGG GGG GFG GGG GG G G+GGG GKGGG+GG
Sbjct: 61 GGGGGGGFGGGSGIGGGAGGGVGGGAGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGG 120
Query: 121 GIGGGAGG------------GGGVGGGIGKGGGLGGGAGGGF----------GKGGGLGG 180
G GGG GG GGG+GGGIGKGGGLGGGAGGG+ GKGGGLGG
Sbjct: 121 GAGGGLGGGIGKGGGLGGGAGGGLGGGIGKGGGLGGGAGGGYGKGGGLGGGIGKGGGLGG 180
Query: 181 GAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGFGGGAGGGFGK---- 240
GAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGGG G GAGGGFGK
Sbjct: 181 GAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGSGAGGGFGKGGGL 240
Query: 241 ----------------------GGGVGGGFGKGGGFGGGV--GGGAGGGGGGGGGGGGGG 259
GGGVGGGFGKGGG GGG+ GGG GGGGGGGGGGGGGG
Sbjct: 241 GGGNEKGGGLGGGVGGGAGGGLGGGVGGGFGKGGGLGGGIGSGGGLGGGGGGGGGGGGGG 300
BLAST of IVF0012433 vs. ExPASy TrEMBL
Match:
A0A6J1H6S7 (glycine-rich cell wall structural protein-like isoform X5 OS=Cucurbita moschata OX=3662 GN=LOC111460136 PE=4 SV=1)
HSP 1 Score: 108.2 bits (269), Expect = 5.2e-20
Identity = 217/314 (69.11%), Postives = 229/314 (72.93%), Query Frame = 0
Query: 1 MASGWKRVALLSLLCFHVLVYNVVAKE--DGKEEKFLFFGKSGGLGGGFGGGSGFGGGFG 60
MA+G RVALLSL CF+VLV++VVAK+ +G+EEKFLFFGKSGGLG GFGGGSGFGGGFG
Sbjct: 1 MATGCNRVALLSLFCFYVLVFSVVAKDVTNGEEEKFLFFGKSGGLGVGFGGGSGFGGGFG 60
Query: 61 GGGGGGG-----------GGGGGGGGGFGGGGGYGG--------GHGIGGGFGKGGGVGG 120
GGGGGGG GGG GGG GFG GGG GG G G+GGG GKGGG+GG
Sbjct: 61 GGGGGGGFGGGSGIGGGAGGGVGGGAGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGG 120
Query: 121 GIGGGAGG--------------GGGVGGGIGKGGGLGGGAGGGFGKGGGLGGGAGGGFGK 180
G GGG GG GGG+GGGIGKGGGLGGG GGG GKGGGLGGGAGGG+GK
Sbjct: 121 GAGGGLGGGIGKGGGLGGGYGKGGGLGGGIGKGGGLGGGLGGGIGKGGGLGGGAGGGYGK 180
Query: 181 GGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGFGGGAGGGFGKGGGVGGGFGKGG 240
GGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGGG GGGAGGGFGKGGG+GGG GKGG
Sbjct: 181 GGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGG 240
Query: 241 GFGGGVGG------------------GAGGGGGGGGGGGGGGGGGFGKGGGFGSG---GG 259
G G G GG G G GGG GGG GGG GGGFGKGGG G G GG
Sbjct: 241 GLGSGAGGGFGKGGGLGGGNEKGGGLGGGVGGGAGGGLGGGVGGGFGKGGGLGGGIGSGG 300
BLAST of IVF0012433 vs. NCBI nr
Match:
XP_016902584.1 (PREDICTED: glycine-rich cell wall structural protein 1 [Cucumis melo])
HSP 1 Score: 240 bits (613), Expect = 5.04e-75
Identity = 260/280 (92.86%), Postives = 260/280 (92.86%), Query Frame = 0
Query: 1 MASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFGGG 60
MASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFGGG
Sbjct: 22 MASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFGGG 81
Query: 61 GGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKGGG 120
GGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKGGG
Sbjct: 82 GGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKGGG 141
Query: 121 LGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGK-------GGGLGGGAGGGFGKGGGL 180
LGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGK GGGLGGGAGGGFGKGGGL
Sbjct: 142 LGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKVGGGIGKGGGLGGGAGGGFGKGGGL 201
Query: 181 GGGIGKGGGFGGGAGGGFGKGGGVGGGFGKGGGFGGGVGGGAGGGGGGGGGGGGGGGGGF 240
GGGIGKGGGFGGGAGGGFGKGGGVGGGFGKGGGFGGGVGGGAGGGGGGGGGGGGGGGGGF
Sbjct: 202 GGGIGKGGGFGGGAGGGFGKGGGVGGGFGKGGGFGGGVGGGAGGGGGGGGGGGGGGGGGF 261
Query: 241 GKGGGFGSG-------------GGGFGGGGGFGGGGIGHH 260
GKGGGFGSG GGGFGGGGGFGGGGIGHH
Sbjct: 262 GKGGGFGSGFGSGFGGGVGGGGGGGFGGGGGFGGGGIGHH 301
BLAST of IVF0012433 vs. NCBI nr
Match:
KAA0050716.1 (hypothetical protein E6C27_scaffold560G00130 [Cucumis melo var. makuwa] >TYK01449.1 hypothetical protein E5676_scaffold772G00390 [Cucumis melo var. makuwa])
HSP 1 Score: 207 bits (528), Expect = 3.35e-60
Identity = 206/215 (95.81%), Postives = 207/215 (96.28%), Query Frame = 0
Query: 1 MASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFGGG 60
MASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFGGG
Sbjct: 1 MASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFGGG 60
Query: 61 GGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKGGG 120
GGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKGGG
Sbjct: 61 GGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKGGG 120
Query: 121 LGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAG--GGFGKGGGLGGGIG 180
LGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAG GGFGKGGGLGGGIG
Sbjct: 121 LGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGAGGGFGKGGGLGGGIG 180
Query: 181 KGGGFGGGAG--GGFGKGGGVGGGFGKGGGFGGGV 211
KGGG GGGAG GGFGKGGG+GGG GKGGG GGG
Sbjct: 181 KGGGLGGGAGAGGGFGKGGGLGGGIGKGGGLGGGA 215
BLAST of IVF0012433 vs. NCBI nr
Match:
KAE8651806.1 (hypothetical protein Csa_006078 [Cucumis sativus])
HSP 1 Score: 195 bits (496), Expect = 1.14e-55
Identity = 196/211 (92.89%), Postives = 201/211 (95.26%), Query Frame = 0
Query: 1 MASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFGGG 60
MASGWKRVALLSLLCF V+VYNVVAKEDGKEEKFLFFGKSGGLG GFGGGSGFGGG GG
Sbjct: 1 MASGWKRVALLSLLCFQVIVYNVVAKEDGKEEKFLFFGKSGGLGSGFGGGSGFGGG--GG 60
Query: 61 GGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKGGG 120
GGGGGGGGGGGGGGFGGG G+GGGHGIGGGFGKGGGVGGG+GGGAGGG GVGGGIGKGGG
Sbjct: 61 GGGGGGGGGGGGGGFGGGVGFGGGHGIGGGFGKGGGVGGGVGGGAGGGSGVGGGIGKGGG 120
Query: 121 LGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKG 180
LGGG+GGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKG
Sbjct: 121 LGGGSGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKG 180
Query: 181 GGFGGGAGGGFGKGGGVGGGFGKGGGFGGGV 211
GG GGGAGGGFGKGGG+GGG GKGGG GGG
Sbjct: 181 GGLGGGAGGGFGKGGGLGGGIGKGGGLGGGA 209
BLAST of IVF0012433 vs. NCBI nr
Match:
XP_031737441.1 (LOW QUALITY PROTEIN: glycine-rich cell wall structural protein [Cucumis sativus])
HSP 1 Score: 195 bits (496), Expect = 2.35e-55
Identity = 196/211 (92.89%), Postives = 201/211 (95.26%), Query Frame = 0
Query: 1 MASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFGGG 60
MASGWKRVALLSLLCF V+VYNVVAKEDGKEEKFLFFGKSGGLG GFGGGSGFGGG GG
Sbjct: 1 MASGWKRVALLSLLCFQVIVYNVVAKEDGKEEKFLFFGKSGGLGSGFGGGSGFGGG--GG 60
Query: 61 GGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKGGG 120
GGGGGGGGGGGGGGFGGG G+GGGHGIGGGFGKGGGVGGG+GGGAGGG GVGGGIGKGGG
Sbjct: 61 GGGGGGGGGGGGGGFGGGVGFGGGHGIGGGFGKGGGVGGGVGGGAGGGSGVGGGIGKGGG 120
Query: 121 LGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKG 180
LGGG+GGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKG
Sbjct: 121 LGGGSGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKG 180
Query: 181 GGFGGGAGGGFGKGGGVGGGFGKGGGFGGGV 211
GG GGGAGGGFGKGGG+GGG GKGGG GGG
Sbjct: 181 GGLGGGAGGGFGKGGGLGGGIGKGGGLGGGA 209
BLAST of IVF0012433 vs. NCBI nr
Match:
XP_038906572.1 (glycine-rich cell wall structural protein isoform X3 [Benincasa hispida] >XP_038906573.1 glycine-rich cell wall structural protein isoform X4 [Benincasa hispida])
HSP 1 Score: 154 bits (390), Expect = 4.94e-41
Identity = 187/238 (78.57%), Postives = 194/238 (81.51%), Query Frame = 0
Query: 1 MASGWKRVALLSLLCFHVLVY--NVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFG 60
MASG+KRVALLSLLCFHV+VY NVVAKEDGKEEKFLFFGKSGGLGGGFGGG G GGFG
Sbjct: 1 MASGFKRVALLSLLCFHVIVYSNNVVAKEDGKEEKFLFFGKSGGLGGGFGGGGG--GGFG 60
Query: 61 GGGGGGGGGGGGGGGGFGGG--GGYGGGHGIGGG--------------------FGKGGG 120
GGGG GGGGG GGGGGFGGG GG+GGGHGIGGG FGKGGG
Sbjct: 61 GGGGFGGGGGAGGGGGFGGGSGGGFGGGHGIGGGIGGGGGAGGGFGKGGGIGGGFGKGGG 120
Query: 121 VGGGIGGGAGGGGGVGGGIGKGGGLGGGAGGGFGKGGGLGGG----------AGGGFGKG 180
+GGG+GGGAGGGGG+GGGIGKGGGLGGGAGGGFGKGGGLGGG AGGGFGKG
Sbjct: 121 IGGGVGGGAGGGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKG 180
Query: 181 GGLGGGIGKGGGLGGG----AGGGFGKGGGLGGGIGKGGGFGGGAGGGFGKGGGVGGG 200
GGLGGGIGKGGGLGGG AGGGFGKGGGLGGGIGKGGG GGGAGGGFGKGGG+GGG
Sbjct: 181 GGLGGGIGKGGGLGGGVGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGG 236
BLAST of IVF0012433 vs. TAIR 10
Match:
AT3G23450.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; Has 694543 Blast hits to 47111 proteins in 2535 species: Archae - 1794; Bacteria - 163056; Metazoa - 258989; Fungi - 49151; Plants - 70496; Viruses - 8919; Other Eukaryotes - 142138 (source: NCBI BLink). )
HSP 1 Score: 55.8 bits (133), Expect = 5.8e-08
Identity = 201/346 (58.09%), Postives = 217/346 (62.72%), Query Frame = 0
Query: 10 LLSLLCFHVLVYNVVAKE-----DGKEEKFLFFGKSGGLGGGFGGGS------------- 69
LL+LLCFHV V NVVA++ D E+ + GK GG GGGFGGG+
Sbjct: 10 LLALLCFHVFVVNVVARDVSSGRDEDEKTLVGGGKGGGFGGGFGGGAGGGVGGGAGGGFG 69
Query: 70 -GFGGGFGGGGGGGGGGGGGGGGGFGGGGGYGGGH--------------GIGGGFGKGGG 129
G GGGFGGGGGGGGGGGGGGGGGFGGGGG+GGGH G+GGGFGKGGG
Sbjct: 70 GGAGGGFGGGGGGGGGGGGGGGGGFGGGGGFGGGHGGGVGGGVGGGHGGGVGGGFGKGGG 129
Query: 130 V----------------GGGIGGGAGGGGGVGGGIGKGGGL----------------GGG 189
+ GGGIGGG G GGGVGGGIGKGGG+ GGG
Sbjct: 130 IGGGIGKGGGVGGGIGKGGGIGGGIGKGGGVGGGIGKGGGIGGGIGKGGGIGGGIGKGGG 189
Query: 190 AGGGFGKGGGL------GGGAGGGFGKGGGLGGGIGKGGGL------GGGAGGGFGKGGG 249
GGG GKGGG+ GGG GGGFGKGGG+GGGIGKGGG+ GGG GGG GKGGG
Sbjct: 190 IGGGIGKGGGIGGGIGKGGGVGGGFGKGGGVGGGIGKGGGVGGGFGKGGGVGGGIGKGGG 249
Query: 250 LGGGIGKGGGF----------------GGGAGGGFGKGGGVGGGFGKGGGFGGGVGGGAG 259
+GGGIGKGGG GGG GGG GKGGG+GGG GKGGG GGG+G G G
Sbjct: 250 IGGGIGKGGGIGGGIGKGGGIGGGIGKGGGIGGGIGKGGGIGGGIGKGGGIGGGIGKGGG 309
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A1S4E2X3 | 2.5e-59 | 92.86 | glycine-rich cell wall structural protein 1 OS=Cucumis melo OX=3656 GN=LOC103499... | [more] |
A0A0A0LIH7 | 1.9e-43 | 82.81 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G173020 PE=4 SV=1 | [more] |
A0A5D3BTN6 | 6.3e-42 | 87.96 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A6J1H3F4 | 7.9e-21 | 67.06 | glycine-rich cell wall structural protein-like isoform X8 OS=Cucurbita moschata ... | [more] |
A0A6J1H6S7 | 5.2e-20 | 69.11 | glycine-rich cell wall structural protein-like isoform X5 OS=Cucurbita moschata ... | [more] |
Match Name | E-value | Identity | Description | |
XP_016902584.1 | 5.04e-75 | 92.86 | PREDICTED: glycine-rich cell wall structural protein 1 [Cucumis melo] | [more] |
KAA0050716.1 | 3.35e-60 | 95.81 | hypothetical protein E6C27_scaffold560G00130 [Cucumis melo var. makuwa] >TYK0144... | [more] |
KAE8651806.1 | 1.14e-55 | 92.89 | hypothetical protein Csa_006078 [Cucumis sativus] | [more] |
XP_031737441.1 | 2.35e-55 | 92.89 | LOW QUALITY PROTEIN: glycine-rich cell wall structural protein [Cucumis sativus] | [more] |
XP_038906572.1 | 4.94e-41 | 78.57 | glycine-rich cell wall structural protein isoform X3 [Benincasa hispida] >XP_038... | [more] |
Match Name | E-value | Identity | Description | |
AT3G23450.1 | 5.8e-08 | 58.09 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |