IVF0012433 (gene) Melon (IVF77) v1

Overview
NameIVF0012433
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionglycine-rich cell wall structural protein 1
Locationchr05: 5695675 .. 5697141 (+)
RNA-Seq ExpressionIVF0012433
SyntenyIVF0012433
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTATTATATTCTTCATTGCCCTCCACCTGCAAGATGGCAAGTGGTTGGAAGAGAGTGGCTTTGTTATCTTTGTTGTGTTTTCACGTTCTTGTGTACAATGTGGTTGCGAAGGAAGATGGAAAGGAAGAGAAGTTTCTGTTCTTTGGCAAGAGTGGTGGACTAGGGGGTGGATTTGGTGGTGGGAGTGGATTCGGAGGTGGTTTTGGAGGAGGTGGAGGTGGCGGTGGAGGCGGCGGTGGTGGTGGAGGCGGAGGTTTTGGAGGTGGTGGAGGATATGGAGGAGGTCACGGAATCGGTGGTGGATTTGGTAAAGGTGGCGGTGTTGGTGGCGGAATAGGAGGAGGCGCTGGTGGTGGCGGTGGAGTAGGAGGTGGCATTGGAAAAGGTGGAGGATTAGGTGGCGGTGCAGGAGGTGGGTTTGGAAAAGGTGGAGGTCTAGGAGGTGGTGCTGGTGGCGGGTTTGGTAAAGGTGGTGGACTTGGTGGTGGCATTGGAAAAGGTGGAGGCTTAGGTGGTGGTGCTGGTGCTGGTGGAGGATTTGGAAAAGGTGGTGGACTCGGTGGTGGAATTGGTAAAGGTGGAGGCTTAGGTGGTGGTGCTGGTGCTGGTGGAGGATTTGGAAAAGGTGGTGGACTCGGTGGTGGAATTGGTAAAGGTGGAGGCTTAGGTGGTGGTGCCGGTGGAGGAATTGGTAAAGGTGGTGGACTTGGTGGTGGCATTGGAAAGGGTGGAGGCTTAGGTGGTGGTGCTGGCGGAGGAATTGGTAAAGGTGGTGTAATTGGTAAGGGTGGAGGTCTTGGTGGCGGAGTAGGAGGTGGTGCTGGTGGAGGGTTTGGAAAGGGTGGCGGACTTGGTGGTGGCATTGGAAAAGGTGGAGGTCTAGGTGGTGGAGTTGGAGGTGGTGCTGGTGGAGGGTTTGGAAAAGGTGGTGGACTCGGTGGTGGCATTGGGAAAGGCGGAGGACTAGGTGGTGGAGTTGGAGGTGGTGCTGGTGGAGGTTTTGGCAAGGGTGGAGGACTTGGTGGTGGAATTGGAAAAGGTGGAGGACTTGGTGGTGGTGCTGGTGGAGGGTTTGGCAAAGGTGGAGGACTTGGTGGTGGAATCGGAAAAGGTGGAGGGCTCGGTGGTGGCGCCGGCGGAGGGTTCGGCAAAGGTGGAGGACTTGGTGGTGGAATTGGTAAAGGCGGTGGATTTGGTGGTGGTGCTGGAGGAGGGTTTGGTAAGGGTGGTGGAGTTGGAGGAGGATTCGGTAAGGGCGGAGGATTTGGTGGTGGAGTAGGAGGCGGTGCTGGTGGTGGTGGCGGCGGAGGAGGAGGCGGAGGCGGTGGGGGTGGGGGTGGCTTTGGAAAAGGTGGAGGCTTTGGTAGTGGATTTGGAGCGGGTTCGGTGGTGGTGTTGGTGGAGGTGGCGGAGGAGGCTTTGGTGGTGGTGGCGGATTTGGTGGAGGCGGAATTGGACACCACTAA

mRNA sequence

ATTATTATATTCTTCATTGCCCTCCACCTGCAAGATGGCAAGTGGTTGGAAGAGAGTGGCTTTGTTATCTTTGTTGTGTTTTCACGTTCTTGTGTACAATGTGGTTGCGAAGGAAGATGGAAAGGAAGAGAAGTTTCTGTTCTTTGGCAAGAGTGGTGGACTAGGGGGTGGATTTGGTGGTGGGAGTGGATTCGGAGGTGGTTTTGGAGGAGGTGGAGGTGGCGGTGGAGGCGGCGGTGGTGGTGGAGGCGGAGGTTTTGGAGGTGGTGGAGGATATGGAGGAGGTCACGGAATCGGTGGTGGATTTGGTAAAGGTGGCGGTGTTGGTGGCGGAATAGGAGGAGGCGCTGGTGGTGGCGGTGGAGTAGGAGGTGGCATTGGAAAAGGTGGAGGATTAGGTGGCGGTGCAGGAGGTGGGTTTGGAAAAGGTGGAGGTCTAGGAGGTGGTGCTGGTGGCGGGTTTGGTAAAGGTGGTGGACTTGGTGGTGGCATTGGAAAAGGTGGAGGGCTCGGTGGTGGCGCCGGCGGAGGGTTCGGCAAAGGTGGAGGACTTGGTGGTGGAATTGGTAAAGGCGGTGGATTTGGTGGTGGTGCTGGAGGAGGGTTTGGTAAGGGTGGTGGAGTTGGAGGAGGATTCGGTAAGGGCGGAGGATTTGGTGGTGGAGTAGGAGGCGGTGCTGGTGGTGGTGGCGGCGGAGGAGGAGGCGGAGGCGGTGGGGGTGGGGGTGGCTTTGGAAAAGGTGGAGGCTTTGGTAGTGGCGGAGGAGGCTTTGGTGGTGGTGGCGGATTTGGTGGAGGCGGAATTGGACACCACTAA

Coding sequence (CDS)

ATGGCAAGTGGTTGGAAGAGAGTGGCTTTGTTATCTTTGTTGTGTTTTCACGTTCTTGTGTACAATGTGGTTGCGAAGGAAGATGGAAAGGAAGAGAAGTTTCTGTTCTTTGGCAAGAGTGGTGGACTAGGGGGTGGATTTGGTGGTGGGAGTGGATTCGGAGGTGGTTTTGGAGGAGGTGGAGGTGGCGGTGGAGGCGGCGGTGGTGGTGGAGGCGGAGGTTTTGGAGGTGGTGGAGGATATGGAGGAGGTCACGGAATCGGTGGTGGATTTGGTAAAGGTGGCGGTGTTGGTGGCGGAATAGGAGGAGGCGCTGGTGGTGGCGGTGGAGTAGGAGGTGGCATTGGAAAAGGTGGAGGATTAGGTGGCGGTGCAGGAGGTGGGTTTGGAAAAGGTGGAGGTCTAGGAGGTGGTGCTGGTGGCGGGTTTGGTAAAGGTGGTGGACTTGGTGGTGGCATTGGAAAAGGTGGAGGGCTCGGTGGTGGCGCCGGCGGAGGGTTCGGCAAAGGTGGAGGACTTGGTGGTGGAATTGGTAAAGGCGGTGGATTTGGTGGTGGTGCTGGAGGAGGGTTTGGTAAGGGTGGTGGAGTTGGAGGAGGATTCGGTAAGGGCGGAGGATTTGGTGGTGGAGTAGGAGGCGGTGCTGGTGGTGGTGGCGGCGGAGGAGGAGGCGGAGGCGGTGGGGGTGGGGGTGGCTTTGGAAAAGGTGGAGGCTTTGGTAGTGGCGGAGGAGGCTTTGGTGGTGGTGGCGGATTTGGTGGAGGCGGAATTGGACACCACTAA

Protein sequence

MASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFGGGGGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKGGGLGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGFGGGAGGGFGKGGGVGGGFGKGGGFGGGVGGGAGGGGGGGGGGGGGGGGGFGKGGGFGSGGGGFGGGGGFGGGGIGHH
Homology
BLAST of IVF0012433 vs. ExPASy TrEMBL
Match: A0A1S4E2X3 (glycine-rich cell wall structural protein 1 OS=Cucumis melo OX=3656 GN=LOC103499434 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 2.5e-59
Identity = 260/280 (92.86%), Postives = 260/280 (92.86%), Query Frame = 0

Query: 1   MASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFGGG 60
           MASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFGGG
Sbjct: 22  MASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFGGG 81

Query: 61  GGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKGGG 120
           GGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKGGG
Sbjct: 82  GGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKGGG 141

Query: 121 LGGGAGGGFGKGGGLGGGAGGGFGKGGGL-------GGGIGKGGGLGGGAGGGFGKGGGL 180
           LGGGAGGGFGKGGGLGGGAGGGFGKGGGL       GGGIGKGGGLGGGAGGGFGKGGGL
Sbjct: 142 LGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKVGGGIGKGGGLGGGAGGGFGKGGGL 201

Query: 181 GGGIGKGGGFGGGAGGGFGKGGGVGGGFGKGGGFGGGVGGGAGGGGGGGGGGGGGGGGGF 240
           GGGIGKGGGFGGGAGGGFGKGGGVGGGFGKGGGFGGGVGGGAGGGGGGGGGGGGGGGGGF
Sbjct: 202 GGGIGKGGGFGGGAGGGFGKGGGVGGGFGKGGGFGGGVGGGAGGGGGGGGGGGGGGGGGF 261

Query: 241 GKGGGFGS-------------GGGGFGGGGGFGGGGIGHH 261
           GKGGGFGS             GGGGFGGGGGFGGGGIGHH
Sbjct: 262 GKGGGFGSGFGSGFGGGVGGGGGGGFGGGGGFGGGGIGHH 301

BLAST of IVF0012433 vs. ExPASy TrEMBL
Match: A0A0A0LIH7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G173020 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 1.9e-43
Identity = 236/285 (82.81%), Postives = 240/285 (84.21%), Query Frame = 0

Query: 1   MASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFGGG 60
           MASGWKRVALLSLLCF V+VYNVVAKEDGKEEKFLFFGKSGGLG GFGGGSGFGG  GGG
Sbjct: 1   MASGWKRVALLSLLCFQVIVYNVVAKEDGKEEKFLFFGKSGGLGSGFGGGSGFGG--GGG 60

Query: 61  GGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKGGG 120
           GGGGGGGGGGGGGGFGGG G+GGGHGIGGGFGKGGGVGGG+GGGAGGG GVGGGIGKGGG
Sbjct: 61  GGGGGGGGGGGGGGFGGGVGFGGGHGIGGGFGKGGGVGGGVGGGAGGGSGVGGGIGKGGG 120

Query: 121 LGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKG 180
           LGGG+GGGFGKGGGLGGGAGGGF          GKGGGLGGGAGGGFGKGGGLGGGIGKG
Sbjct: 121 LGGGSGGGFGKGGGLGGGAGGGF----------GKGGGLGGGAGGGFGKGGGLGGGIGKG 180

Query: 181 GGF--GGGAGGGFGKGGGVGGGFGKGGGFGGGVGGGAGGGGGGGGGGGGGGGGGFGKGGG 240
           GG   GGGAGGGFGKGGGVGGGFGKGGGFGGGVGGGA GGGGGGGGGGGGGGGGFG GGG
Sbjct: 181 GGLGGGGGAGGGFGKGGGVGGGFGKGGGFGGGVGGGA-GGGGGGGGGGGGGGGGFGNGGG 240

Query: 241 FG-----------------------SGGGGFGGGGGFGGGGIGHH 261
           FG                        GGGGFGGGGGFGGGGIGHH
Sbjct: 241 FGGGFGKGFGGGIGGGSGSGFGGGVGGGGGFGGGGGFGGGGIGHH 272

BLAST of IVF0012433 vs. ExPASy TrEMBL
Match: A0A5D3BTN6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold772G00390 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 6.3e-42
Identity = 241/274 (87.96%), Postives = 243/274 (88.69%), Query Frame = 0

Query: 1   MASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFGGG 60
           MASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFGGG
Sbjct: 1   MASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFGGG 60

Query: 61  GGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKGGG 120
           GGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKGGG
Sbjct: 61  GGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKGGG 120

Query: 121 LGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGG--GAGGGFGKGGGLGGGIG 180
           LGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGG  GAGGGFGKGGGLGGGIG
Sbjct: 121 LGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGAGGGFGKGGGLGGGIG 180

Query: 181 KGGGFGG--GAGGGFGKGGGVGGGFGKGGGFGGGVGGGAGGGG------GGGGGGGGGGG 240
           KGGG GG  GAGGGFGKGGG+GGG GKGGG GGG GGG G GG      G GGG GGG G
Sbjct: 181 KGGGLGGGAGAGGGFGKGGGLGGGIGKGGGLGGGAGGGIGKGGGLGGGIGKGGGLGGGAG 240

Query: 241 GGFGKGGGFGSGGG-----GFGGGGGFG-GGGIG 259
           GG GKGG  G GGG     G G GGGFG GGG+G
Sbjct: 241 GGIGKGGVIGKGGGLGGGVGGGAGGGFGKGGGLG 274

BLAST of IVF0012433 vs. ExPASy TrEMBL
Match: A0A6J1H3F4 (glycine-rich cell wall structural protein-like isoform X8 OS=Cucurbita moschata OX=3662 GN=LOC111460136 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 7.9e-21
Identity = 228/340 (67.06%), Postives = 240/340 (70.59%), Query Frame = 0

Query: 1   MASGWKRVALLSLLCFHVLVYNVVAKE--DGKEEKFLFFGKSGGLGGGFGGGSGFGGGFG 60
           MA+G  RVALLSL CF+VLV++VVAK+  +G+EEKFLFFGKSGGLG GFGGGSGFGGGFG
Sbjct: 1   MATGCNRVALLSLFCFYVLVFSVVAKDVTNGEEEKFLFFGKSGGLGVGFGGGSGFGGGFG 60

Query: 61  GGGGGGG-----------GGGGGGGGGFGGGGGYGG--------GHGIGGGFGKGGGVGG 120
           GGGGGGG           GGG GGG GFG GGG GG        G G+GGG GKGGG+GG
Sbjct: 61  GGGGGGGFGGGSGIGGGAGGGVGGGAGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGG 120

Query: 121 GIGGGAGG------------GGGVGGGIGKGGGLGGGAGGGF----------GKGGGLGG 180
           G GGG GG            GGG+GGGIGKGGGLGGGAGGG+          GKGGGLGG
Sbjct: 121 GAGGGLGGGIGKGGGLGGGAGGGLGGGIGKGGGLGGGAGGGYGKGGGLGGGIGKGGGLGG 180

Query: 181 GAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGFGGGAGGGFGK---- 240
           GAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGGG G GAGGGFGK    
Sbjct: 181 GAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGSGAGGGFGKGGGL 240

Query: 241 ----------------------GGGVGGGFGKGGGFGGGV--GGGAGGGGGGGGGGGGGG 259
                                 GGGVGGGFGKGGG GGG+  GGG GGGGGGGGGGGGGG
Sbjct: 241 GGGNEKGGGLGGGVGGGAGGGLGGGVGGGFGKGGGLGGGIGSGGGLGGGGGGGGGGGGGG 300

BLAST of IVF0012433 vs. ExPASy TrEMBL
Match: A0A6J1H6S7 (glycine-rich cell wall structural protein-like isoform X5 OS=Cucurbita moschata OX=3662 GN=LOC111460136 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 5.2e-20
Identity = 217/314 (69.11%), Postives = 229/314 (72.93%), Query Frame = 0

Query: 1   MASGWKRVALLSLLCFHVLVYNVVAKE--DGKEEKFLFFGKSGGLGGGFGGGSGFGGGFG 60
           MA+G  RVALLSL CF+VLV++VVAK+  +G+EEKFLFFGKSGGLG GFGGGSGFGGGFG
Sbjct: 1   MATGCNRVALLSLFCFYVLVFSVVAKDVTNGEEEKFLFFGKSGGLGVGFGGGSGFGGGFG 60

Query: 61  GGGGGGG-----------GGGGGGGGGFGGGGGYGG--------GHGIGGGFGKGGGVGG 120
           GGGGGGG           GGG GGG GFG GGG GG        G G+GGG GKGGG+GG
Sbjct: 61  GGGGGGGFGGGSGIGGGAGGGVGGGAGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGG 120

Query: 121 GIGGGAGG--------------GGGVGGGIGKGGGLGGGAGGGFGKGGGLGGGAGGGFGK 180
           G GGG GG              GGG+GGGIGKGGGLGGG GGG GKGGGLGGGAGGG+GK
Sbjct: 121 GAGGGLGGGIGKGGGLGGGYGKGGGLGGGIGKGGGLGGGLGGGIGKGGGLGGGAGGGYGK 180

Query: 181 GGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGFGGGAGGGFGKGGGVGGGFGKGG 240
           GGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGGG GGGAGGGFGKGGG+GGG GKGG
Sbjct: 181 GGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGG 240

Query: 241 GFGGGVGG------------------GAGGGGGGGGGGGGGGGGGFGKGGGFGSG---GG 259
           G G G GG                  G G GGG GGG GGG GGGFGKGGG G G   GG
Sbjct: 241 GLGSGAGGGFGKGGGLGGGNEKGGGLGGGVGGGAGGGLGGGVGGGFGKGGGLGGGIGSGG 300

BLAST of IVF0012433 vs. NCBI nr
Match: XP_016902584.1 (PREDICTED: glycine-rich cell wall structural protein 1 [Cucumis melo])

HSP 1 Score: 240 bits (613), Expect = 5.04e-75
Identity = 260/280 (92.86%), Postives = 260/280 (92.86%), Query Frame = 0

Query: 1   MASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFGGG 60
           MASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFGGG
Sbjct: 22  MASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFGGG 81

Query: 61  GGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKGGG 120
           GGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKGGG
Sbjct: 82  GGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKGGG 141

Query: 121 LGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGK-------GGGLGGGAGGGFGKGGGL 180
           LGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGK       GGGLGGGAGGGFGKGGGL
Sbjct: 142 LGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKVGGGIGKGGGLGGGAGGGFGKGGGL 201

Query: 181 GGGIGKGGGFGGGAGGGFGKGGGVGGGFGKGGGFGGGVGGGAGGGGGGGGGGGGGGGGGF 240
           GGGIGKGGGFGGGAGGGFGKGGGVGGGFGKGGGFGGGVGGGAGGGGGGGGGGGGGGGGGF
Sbjct: 202 GGGIGKGGGFGGGAGGGFGKGGGVGGGFGKGGGFGGGVGGGAGGGGGGGGGGGGGGGGGF 261

Query: 241 GKGGGFGSG-------------GGGFGGGGGFGGGGIGHH 260
           GKGGGFGSG             GGGFGGGGGFGGGGIGHH
Sbjct: 262 GKGGGFGSGFGSGFGGGVGGGGGGGFGGGGGFGGGGIGHH 301

BLAST of IVF0012433 vs. NCBI nr
Match: KAA0050716.1 (hypothetical protein E6C27_scaffold560G00130 [Cucumis melo var. makuwa] >TYK01449.1 hypothetical protein E5676_scaffold772G00390 [Cucumis melo var. makuwa])

HSP 1 Score: 207 bits (528), Expect = 3.35e-60
Identity = 206/215 (95.81%), Postives = 207/215 (96.28%), Query Frame = 0

Query: 1   MASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFGGG 60
           MASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFGGG
Sbjct: 1   MASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFGGG 60

Query: 61  GGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKGGG 120
           GGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKGGG
Sbjct: 61  GGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKGGG 120

Query: 121 LGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAG--GGFGKGGGLGGGIG 180
           LGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAG  GGFGKGGGLGGGIG
Sbjct: 121 LGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGAGGGFGKGGGLGGGIG 180

Query: 181 KGGGFGGGAG--GGFGKGGGVGGGFGKGGGFGGGV 211
           KGGG GGGAG  GGFGKGGG+GGG GKGGG GGG 
Sbjct: 181 KGGGLGGGAGAGGGFGKGGGLGGGIGKGGGLGGGA 215

BLAST of IVF0012433 vs. NCBI nr
Match: KAE8651806.1 (hypothetical protein Csa_006078 [Cucumis sativus])

HSP 1 Score: 195 bits (496), Expect = 1.14e-55
Identity = 196/211 (92.89%), Postives = 201/211 (95.26%), Query Frame = 0

Query: 1   MASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFGGG 60
           MASGWKRVALLSLLCF V+VYNVVAKEDGKEEKFLFFGKSGGLG GFGGGSGFGGG  GG
Sbjct: 1   MASGWKRVALLSLLCFQVIVYNVVAKEDGKEEKFLFFGKSGGLGSGFGGGSGFGGG--GG 60

Query: 61  GGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKGGG 120
           GGGGGGGGGGGGGGFGGG G+GGGHGIGGGFGKGGGVGGG+GGGAGGG GVGGGIGKGGG
Sbjct: 61  GGGGGGGGGGGGGGFGGGVGFGGGHGIGGGFGKGGGVGGGVGGGAGGGSGVGGGIGKGGG 120

Query: 121 LGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKG 180
           LGGG+GGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKG
Sbjct: 121 LGGGSGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKG 180

Query: 181 GGFGGGAGGGFGKGGGVGGGFGKGGGFGGGV 211
           GG GGGAGGGFGKGGG+GGG GKGGG GGG 
Sbjct: 181 GGLGGGAGGGFGKGGGLGGGIGKGGGLGGGA 209

BLAST of IVF0012433 vs. NCBI nr
Match: XP_031737441.1 (LOW QUALITY PROTEIN: glycine-rich cell wall structural protein [Cucumis sativus])

HSP 1 Score: 195 bits (496), Expect = 2.35e-55
Identity = 196/211 (92.89%), Postives = 201/211 (95.26%), Query Frame = 0

Query: 1   MASGWKRVALLSLLCFHVLVYNVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFGGG 60
           MASGWKRVALLSLLCF V+VYNVVAKEDGKEEKFLFFGKSGGLG GFGGGSGFGGG  GG
Sbjct: 1   MASGWKRVALLSLLCFQVIVYNVVAKEDGKEEKFLFFGKSGGLGSGFGGGSGFGGG--GG 60

Query: 61  GGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKGGG 120
           GGGGGGGGGGGGGGFGGG G+GGGHGIGGGFGKGGGVGGG+GGGAGGG GVGGGIGKGGG
Sbjct: 61  GGGGGGGGGGGGGGFGGGVGFGGGHGIGGGFGKGGGVGGGVGGGAGGGSGVGGGIGKGGG 120

Query: 121 LGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKG 180
           LGGG+GGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKG
Sbjct: 121 LGGGSGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKG 180

Query: 181 GGFGGGAGGGFGKGGGVGGGFGKGGGFGGGV 211
           GG GGGAGGGFGKGGG+GGG GKGGG GGG 
Sbjct: 181 GGLGGGAGGGFGKGGGLGGGIGKGGGLGGGA 209

BLAST of IVF0012433 vs. NCBI nr
Match: XP_038906572.1 (glycine-rich cell wall structural protein isoform X3 [Benincasa hispida] >XP_038906573.1 glycine-rich cell wall structural protein isoform X4 [Benincasa hispida])

HSP 1 Score: 154 bits (390), Expect = 4.94e-41
Identity = 187/238 (78.57%), Postives = 194/238 (81.51%), Query Frame = 0

Query: 1   MASGWKRVALLSLLCFHVLVY--NVVAKEDGKEEKFLFFGKSGGLGGGFGGGSGFGGGFG 60
           MASG+KRVALLSLLCFHV+VY  NVVAKEDGKEEKFLFFGKSGGLGGGFGGG G  GGFG
Sbjct: 1   MASGFKRVALLSLLCFHVIVYSNNVVAKEDGKEEKFLFFGKSGGLGGGFGGGGG--GGFG 60

Query: 61  GGGGGGGGGGGGGGGGFGGG--GGYGGGHGIGGG--------------------FGKGGG 120
           GGGG GGGGG GGGGGFGGG  GG+GGGHGIGGG                    FGKGGG
Sbjct: 61  GGGGFGGGGGAGGGGGFGGGSGGGFGGGHGIGGGIGGGGGAGGGFGKGGGIGGGFGKGGG 120

Query: 121 VGGGIGGGAGGGGGVGGGIGKGGGLGGGAGGGFGKGGGLGGG----------AGGGFGKG 180
           +GGG+GGGAGGGGG+GGGIGKGGGLGGGAGGGFGKGGGLGGG          AGGGFGKG
Sbjct: 121 IGGGVGGGAGGGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKG 180

Query: 181 GGLGGGIGKGGGLGGG----AGGGFGKGGGLGGGIGKGGGFGGGAGGGFGKGGGVGGG 200
           GGLGGGIGKGGGLGGG    AGGGFGKGGGLGGGIGKGGG GGGAGGGFGKGGG+GGG
Sbjct: 181 GGLGGGIGKGGGLGGGVGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGG 236

BLAST of IVF0012433 vs. TAIR 10
Match: AT3G23450.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; Has 694543 Blast hits to 47111 proteins in 2535 species: Archae - 1794; Bacteria - 163056; Metazoa - 258989; Fungi - 49151; Plants - 70496; Viruses - 8919; Other Eukaryotes - 142138 (source: NCBI BLink). )

HSP 1 Score: 55.8 bits (133), Expect = 5.8e-08
Identity = 201/346 (58.09%), Postives = 217/346 (62.72%), Query Frame = 0

Query: 10  LLSLLCFHVLVYNVVAKE-----DGKEEKFLFFGKSGGLGGGFGGGS------------- 69
           LL+LLCFHV V NVVA++     D  E+  +  GK GG GGGFGGG+             
Sbjct: 10  LLALLCFHVFVVNVVARDVSSGRDEDEKTLVGGGKGGGFGGGFGGGAGGGVGGGAGGGFG 69

Query: 70  -GFGGGFGGGGGGGGGGGGGGGGGFGGGGGYGGGH--------------GIGGGFGKGGG 129
            G GGGFGGGGGGGGGGGGGGGGGFGGGGG+GGGH              G+GGGFGKGGG
Sbjct: 70  GGAGGGFGGGGGGGGGGGGGGGGGFGGGGGFGGGHGGGVGGGVGGGHGGGVGGGFGKGGG 129

Query: 130 V----------------GGGIGGGAGGGGGVGGGIGKGGGL----------------GGG 189
           +                GGGIGGG G GGGVGGGIGKGGG+                GGG
Sbjct: 130 IGGGIGKGGGVGGGIGKGGGIGGGIGKGGGVGGGIGKGGGIGGGIGKGGGIGGGIGKGGG 189

Query: 190 AGGGFGKGGGL------GGGAGGGFGKGGGLGGGIGKGGGL------GGGAGGGFGKGGG 249
            GGG GKGGG+      GGG GGGFGKGGG+GGGIGKGGG+      GGG GGG GKGGG
Sbjct: 190 IGGGIGKGGGIGGGIGKGGGVGGGFGKGGGVGGGIGKGGGVGGGFGKGGGVGGGIGKGGG 249

Query: 250 LGGGIGKGGGF----------------GGGAGGGFGKGGGVGGGFGKGGGFGGGVGGGAG 259
           +GGGIGKGGG                 GGG GGG GKGGG+GGG GKGGG GGG+G G G
Sbjct: 250 IGGGIGKGGGIGGGIGKGGGIGGGIGKGGGIGGGIGKGGGIGGGIGKGGGIGGGIGKGGG 309

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S4E2X32.5e-5992.86glycine-rich cell wall structural protein 1 OS=Cucumis melo OX=3656 GN=LOC103499... [more]
A0A0A0LIH71.9e-4382.81Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G173020 PE=4 SV=1[more]
A0A5D3BTN66.3e-4287.96Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1H3F47.9e-2167.06glycine-rich cell wall structural protein-like isoform X8 OS=Cucurbita moschata ... [more]
A0A6J1H6S75.2e-2069.11glycine-rich cell wall structural protein-like isoform X5 OS=Cucurbita moschata ... [more]
Match NameE-valueIdentityDescription
XP_016902584.15.04e-7592.86PREDICTED: glycine-rich cell wall structural protein 1 [Cucumis melo][more]
KAA0050716.13.35e-6095.81hypothetical protein E6C27_scaffold560G00130 [Cucumis melo var. makuwa] >TYK0144... [more]
KAE8651806.11.14e-5592.89hypothetical protein Csa_006078 [Cucumis sativus][more]
XP_031737441.12.35e-5592.89LOW QUALITY PROTEIN: glycine-rich cell wall structural protein [Cucumis sativus][more]
XP_038906572.14.94e-4178.57glycine-rich cell wall structural protein isoform X3 [Benincasa hispida] >XP_038... [more]
Match NameE-valueIdentityDescription
AT3G23450.15.8e-0858.09unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR39110TRANSMEMBRANE PROTEINcoord: 1..188

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0012433.1IVF0012433.1mRNA