Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAAGAAAAGTTGAAGATGAATCAGTACTTTCAATAGAAACTGATCAAACTATAAATGAAAAGGATAAAGAAAATCAAAAGAAGAAGAAGAAGAAGGAAGGAGAAGGAAGGGATAGGGATTTTCTAATGGTAGCAACAACATTCATTGCAGCCATGGCTTTCCAAGCCGGGACGAATCCTCCAGGCGGCGTATGGCAAGACGACAACAGCCCGAACTACGAAGCAGGCAAATCCATAATGGCTACGAAATCTCCTTCTTTATTCATCAGTTTCATGAGCGGCGTAACTGTTTGTTTCGCGTGCTCGGCGATGCAGTTTATAGTGTTGTTGGGTAAGTCTTCCGAAAAAAGTTGGTCTGTTTCTAAGAGTTTCATTTACTTCACAATGGGGTCTGGAATATCAGCCATCGTTGTTGCTTATTGGTCCGCCATTAAAGCTTTGACTCCCGAAGCTCAAATGTCTCATGTCATTGTTATGCTCAAAACTACTCTTGTTCTTAGTGTTGTTGTGCTCCCTATTTCTATGTATATCGAAAAAAAACGACTTGCATCTCGTTAG
mRNA sequence
ATGTCAAGAAAAGTTGAAGATGAATCAGTACTTTCAATAGAAACTGATCAAACTATAAATGAAAAGGATAAAGAAAATCAAAAGAAGAAGAAGAAGAAGGAAGGAGAAGGAAGGGATAGGGATTTTCTAATGGTAGCAACAACATTCATTGCAGCCATGGCTTTCCAAGCCGGGACGAATCCTCCAGGCGGCGTATGGCAAGACGACAACAGCCCGAACTACGAAGCAGGCAAATCCATAATGGCTACGAAATCTCCTTCTTTATTCATCAGTTTCATGAGCGGCGTAACTGTTTGTTTCGCGTGCTCGGCGATGCAGTTTATAGTGTTGTTGGGTAAGTCTTCCGAAAAAAGTTGGTCTGTTTCTAAGAGTTTCATTTACTTCACAATGGGGTCTGGAATATCAGCCATCGTTGTTGCTTATTGGTCCGCCATTAAAGCTTTGACTCCCGAAGCTCAAATGTCTCATGTCATTGTTATGCTCAAAACTACTCTTGTTCTTAGTGTTGTTGTGCTCCCTATTTCTATGTATATCGAAAAAAAACGACTTGCATCTCGTTAG
Coding sequence (CDS)
ATGTCAAGAAAAGTTGAAGATGAATCAGTACTTTCAATAGAAACTGATCAAACTATAAATGAAAAGGATAAAGAAAATCAAAAGAAGAAGAAGAAGAAGGAAGGAGAAGGAAGGGATAGGGATTTTCTAATGGTAGCAACAACATTCATTGCAGCCATGGCTTTCCAAGCCGGGACGAATCCTCCAGGCGGCGTATGGCAAGACGACAACAGCCCGAACTACGAAGCAGGCAAATCCATAATGGCTACGAAATCTCCTTCTTTATTCATCAGTTTCATGAGCGGCGTAACTGTTTGTTTCGCGTGCTCGGCGATGCAGTTTATAGTGTTGTTGGGTAAGTCTTCCGAAAAAAGTTGGTCTGTTTCTAAGAGTTTCATTTACTTCACAATGGGGTCTGGAATATCAGCCATCGTTGTTGCTTATTGGTCCGCCATTAAAGCTTTGACTCCCGAAGCTCAAATGTCTCATGTCATTGTTATGCTCAAAACTACTCTTGTTCTTAGTGTTGTTGTGCTCCCTATTTCTATGTATATCGAAAAAAAACGACTTGCATCTCGTTAG
Protein sequence
MSRKVEDESVLSIETDQTINEKDKENQKKKKKKEGEGRDRDFLMVATTFIAAMAFQAGTNPPGGVWQDDNSPNYEAGKSIMATKSPSLFISFMSGVTVCFACSAMQFIVLLGKSSEKSWSVSKSFIYFTMGSGISAIVVAYWSAIKALTPEAQMSHVIVMLKTTLVLSVVVLPISMYIEKKRLASR
Homology
BLAST of IVF0012429 vs. ExPASy TrEMBL
Match:
A0A1S4DVA8 (uncharacterized protein LOC107990705 OS=Cucumis melo OX=3656 GN=LOC107990705 PE=4 SV=1)
HSP 1 Score: 346.3 bits (887), Expect = 8.0e-92
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0
Query: 1 MSRKVEDESVLSIETDQTINEKDKENQKKKKKKEGEGRDRDFLMVATTFIAAMAFQAGTN 60
MSRKVEDESVLSIETDQTINEKDKENQKKKKKKEGEGRDRDFLMVATTFIAAMAFQAGTN
Sbjct: 1 MSRKVEDESVLSIETDQTINEKDKENQKKKKKKEGEGRDRDFLMVATTFIAAMAFQAGTN 60
Query: 61 PPGGVWQDDNSPNYEAGKSIMATKSPSLFISFMSGVTVCFACSAMQFIVLLGKSSEKSWS 120
PPGGVWQDDNSPNYEAGKSIMATKSPSLFISFMSGVTVCFACSAMQFIVLLGKSSEKSWS
Sbjct: 61 PPGGVWQDDNSPNYEAGKSIMATKSPSLFISFMSGVTVCFACSAMQFIVLLGKSSEKSWS 120
Query: 121 VSKSFIYFTMGSGISAIVVAYWSAIKALTPEAQMSHVIVMLKTTLVLSVVVLPISMYIEK 180
VSKSFIYFTMGSGISAIVVAYWSAIKALTPEAQMSHVIVMLKTTLVLSVVVLPISMYIEK
Sbjct: 121 VSKSFIYFTMGSGISAIVVAYWSAIKALTPEAQMSHVIVMLKTTLVLSVVVLPISMYIEK 180
Query: 181 KRLASR 187
KRLASR
Sbjct: 181 KRLASR 186
BLAST of IVF0012429 vs. ExPASy TrEMBL
Match:
A0A5D3BRK9 (Ankyrin repeat-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold187G00290 PE=4 SV=1)
HSP 1 Score: 271.2 bits (692), Expect = 3.3e-69
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0
Query: 44 MVATTFIAAMAFQAGTNPPGGVWQDDNSPNYEAGKSIMATKSPSLFISFMSGVTVCFACS 103
MVATTFIAAMAFQAGTNPPGGVWQDDNSPNYEAGKSIMATKSPSLFISFMSGVTVCFACS
Sbjct: 1 MVATTFIAAMAFQAGTNPPGGVWQDDNSPNYEAGKSIMATKSPSLFISFMSGVTVCFACS 60
Query: 104 AMQFIVLLGKSSEKSWSVSKSFIYFTMGSGISAIVVAYWSAIKALTPEAQMSHVIVMLKT 163
AMQFIVLLGKSSEKSWSVSKSFIYFTMGSGISAIVVAYWSAIKALTPEAQMSHVIVMLKT
Sbjct: 61 AMQFIVLLGKSSEKSWSVSKSFIYFTMGSGISAIVVAYWSAIKALTPEAQMSHVIVMLKT 120
Query: 164 TLVLSVVVLPISMYIEKKRLASR 187
TLVLSVVVLPISMYIEKKRLASR
Sbjct: 121 TLVLSVVVLPISMYIEKKRLASR 143
BLAST of IVF0012429 vs. ExPASy TrEMBL
Match:
A0A5A7VAU9 (Ankyrin repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold187G00280 PE=4 SV=1)
HSP 1 Score: 123.6 bits (309), Expect = 8.5e-25
Identity = 82/178 (46.07%), Postives = 112/178 (62.92%), Query Frame = 0
Query: 8 ESV-LSIETDQTINEKDKENQKKKKKKEGEGRDRDFLMVATTFIAAMAFQAGTNPPGGVW 67
ESV ++I+T +T +EK+K +E D DFLMV TTFIA +AFQ GTNPPGGVW
Sbjct: 9 ESVAITIDTTETGHEKNKMMNNNNWIRE----DTDFLMVVTTFIATVAFQIGTNPPGGVW 68
Query: 68 Q-DDNSPNYEAGKSIMATKSPSLFISFMSGVTVCFACSAMQFIVLLGKS---SEKSWSVS 127
Q DD Y AGKSIMATKSPS F ++ +T CF SAMQF VL K K+WS S
Sbjct: 69 QEDDKQGKYFAGKSIMATKSPSDFSGYLVTITACFVFSAMQFAVLFLKKWPVGAKNWSFS 128
Query: 128 KSFIYFTMGSGISAIVVAYWSAIKALTPEA-QMSHVIVMLKTTLVLSVVVLPISMYIE 180
+ +Y TMG IS++ +AY +++A TP++ + + ++ T L + + IS+Y+E
Sbjct: 129 RFILYSTMGLAISSMGIAYGCSVRAYTPDSEEKTRYVISFITMLGFPIGLAAISLYLE 182
BLAST of IVF0012429 vs. ExPASy TrEMBL
Match:
A0A1S3BD33 (uncharacterized protein LOC103488576 OS=Cucumis melo OX=3656 GN=LOC103488576 PE=4 SV=1)
HSP 1 Score: 123.6 bits (309), Expect = 8.5e-25
Identity = 82/178 (46.07%), Postives = 112/178 (62.92%), Query Frame = 0
Query: 8 ESV-LSIETDQTINEKDKENQKKKKKKEGEGRDRDFLMVATTFIAAMAFQAGTNPPGGVW 67
ESV ++I+T +T +EK+K +E D DFLMV TTFIA +AFQ GTNPPGGVW
Sbjct: 9 ESVAITIDTTETGHEKNKMMNNNNWIRE----DTDFLMVVTTFIATVAFQIGTNPPGGVW 68
Query: 68 Q-DDNSPNYEAGKSIMATKSPSLFISFMSGVTVCFACSAMQFIVLLGKS---SEKSWSVS 127
Q DD Y AGKSIMATKSPS F ++ +T CF SAMQF VL K K+WS S
Sbjct: 69 QEDDKQGKYFAGKSIMATKSPSDFSGYLVTITACFVFSAMQFAVLFLKKWPVGAKNWSFS 128
Query: 128 KSFIYFTMGSGISAIVVAYWSAIKALTPEA-QMSHVIVMLKTTLVLSVVVLPISMYIE 180
+ +Y TMG IS++ +AY +++A TP++ + + ++ T L + + IS+Y+E
Sbjct: 129 RFILYSTMGLAISSMGIAYGCSVRAYTPDSEEKTRYVISFITMLGFPIGLAAISLYLE 182
BLAST of IVF0012429 vs. ExPASy TrEMBL
Match:
A0A0A0KGU1 (PGG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G363530 PE=4 SV=1)
HSP 1 Score: 123.2 bits (308), Expect = 1.1e-24
Identity = 79/170 (46.47%), Postives = 106/170 (62.35%), Query Frame = 0
Query: 15 TDQTINEKDKENQKKKKKKEGEGRDRDFLMVATTFIAAMAFQAGTNPPGGVWQ-DDNSPN 74
TD T +EK+K +E D DFLMV TTFIA +AFQ GTNPPGGVWQ DD
Sbjct: 19 TDDTGHEKNKMMNNNNWMRE----DTDFLMVVTTFIATVAFQIGTNPPGGVWQEDDKQGK 78
Query: 75 YEAGKSIMATKSPSLFISFMSGVTVCFACSAMQFIVLLGKS---SEKSWSVSKSFIYFTM 134
Y AGKSIMATKSPS FI F+ +T CF SAMQF VL K K+WS S+ +Y TM
Sbjct: 79 YFAGKSIMATKSPSDFIGFLVTITACFVFSAMQFAVLFLKKWPVGAKNWSFSRFILYSTM 138
Query: 135 GSGISAIVVAYWSAIKALTPEAQMSHV-IVMLKTTLVLSVVVLPISMYIE 180
G +S++ AY +++A TP+++ + + ++ T L + + IS+Y++
Sbjct: 139 GLAVSSMGFAYGCSVRAYTPDSEENTLFVISFITMLGFPISLAAISIYLQ 184
BLAST of IVF0012429 vs. NCBI nr
Match:
XP_016899921.1 (PREDICTED: uncharacterized protein LOC107990705 [Cucumis melo])
HSP 1 Score: 348 bits (894), Expect = 1.20e-120
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0
Query: 1 MSRKVEDESVLSIETDQTINEKDKENQKKKKKKEGEGRDRDFLMVATTFIAAMAFQAGTN 60
MSRKVEDESVLSIETDQTINEKDKENQKKKKKKEGEGRDRDFLMVATTFIAAMAFQAGTN
Sbjct: 1 MSRKVEDESVLSIETDQTINEKDKENQKKKKKKEGEGRDRDFLMVATTFIAAMAFQAGTN 60
Query: 61 PPGGVWQDDNSPNYEAGKSIMATKSPSLFISFMSGVTVCFACSAMQFIVLLGKSSEKSWS 120
PPGGVWQDDNSPNYEAGKSIMATKSPSLFISFMSGVTVCFACSAMQFIVLLGKSSEKSWS
Sbjct: 61 PPGGVWQDDNSPNYEAGKSIMATKSPSLFISFMSGVTVCFACSAMQFIVLLGKSSEKSWS 120
Query: 121 VSKSFIYFTMGSGISAIVVAYWSAIKALTPEAQMSHVIVMLKTTLVLSVVVLPISMYIEK 180
VSKSFIYFTMGSGISAIVVAYWSAIKALTPEAQMSHVIVMLKTTLVLSVVVLPISMYIEK
Sbjct: 121 VSKSFIYFTMGSGISAIVVAYWSAIKALTPEAQMSHVIVMLKTTLVLSVVVLPISMYIEK 180
Query: 181 KRLASR 186
KRLASR
Sbjct: 181 KRLASR 186
BLAST of IVF0012429 vs. NCBI nr
Match:
KAA0064719.1 (ankyrin repeat-containing protein-like [Cucumis melo var. makuwa] >TYK00739.1 ankyrin repeat-containing protein-like [Cucumis melo var. makuwa])
HSP 1 Score: 273 bits (697), Expect = 2.90e-91
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0
Query: 44 MVATTFIAAMAFQAGTNPPGGVWQDDNSPNYEAGKSIMATKSPSLFISFMSGVTVCFACS 103
MVATTFIAAMAFQAGTNPPGGVWQDDNSPNYEAGKSIMATKSPSLFISFMSGVTVCFACS
Sbjct: 1 MVATTFIAAMAFQAGTNPPGGVWQDDNSPNYEAGKSIMATKSPSLFISFMSGVTVCFACS 60
Query: 104 AMQFIVLLGKSSEKSWSVSKSFIYFTMGSGISAIVVAYWSAIKALTPEAQMSHVIVMLKT 163
AMQFIVLLGKSSEKSWSVSKSFIYFTMGSGISAIVVAYWSAIKALTPEAQMSHVIVMLKT
Sbjct: 61 AMQFIVLLGKSSEKSWSVSKSFIYFTMGSGISAIVVAYWSAIKALTPEAQMSHVIVMLKT 120
Query: 164 TLVLSVVVLPISMYIEKKRLASR 186
TLVLSVVVLPISMYIEKKRLASR
Sbjct: 121 TLVLSVVVLPISMYIEKKRLASR 143
BLAST of IVF0012429 vs. NCBI nr
Match:
XP_038884181.1 (uncharacterized protein LOC120075089 [Benincasa hispida])
HSP 1 Score: 135 bits (340), Expect = 1.95e-36
Identity = 76/149 (51.01%), Postives = 101/149 (67.79%), Query Frame = 0
Query: 38 RDRDFLMVATTFIAAMAFQAGTNPPGGVWQDD---NSPNYEAGKSIMATKSPSLFISFMS 97
RD DF+MV TFIA +AFQAGTNPPGGVWQ+D N +Y AGKSIM TKSPS +I FM
Sbjct: 37 RDVDFVMVIVTFIATVAFQAGTNPPGGVWQEDKKVNGTDYIAGKSIMGTKSPSEYIKFMV 96
Query: 98 GVTVCFACSAMQFIVLLGKSSEKSWSVSKSFIYFTMGSGISAIVVAYWSAIKALTPEAQM 157
GVTVC A S +Q IV+L KSWS+ ++ +Y M I+ +VVA+WS++ ALTP M
Sbjct: 97 GVTVCLAFSVIQLIVMLFNWYLKSWSIRRAILYMLMLLTITPMVVAFWSSLLALTPADLM 156
Query: 158 SHVIVMLKTTLVLSVVVLPISM--YIEKK 181
+ + + + +S++VLP + Y+ KK
Sbjct: 157 TEIKAGFWSVIGVSLIVLPFVLLYYLTKK 185
BLAST of IVF0012429 vs. NCBI nr
Match:
XP_011657373.1 (uncharacterized protein LOC105435852 [Cucumis sativus] >KGN47597.1 hypothetical protein Csa_019050 [Cucumis sativus])
HSP 1 Score: 127 bits (319), Expect = 3.25e-33
Identity = 67/119 (56.30%), Postives = 82/119 (68.91%), Query Frame = 0
Query: 39 DRDFLMVATTFIAAMAFQAGTNPPGGVWQ-DDNSPNYEAGKSIMATKSPSLFISFMSGVT 98
D DFLMV TTFIA +AFQ GTNPPGGVWQ DD Y AGKSIMATKSPS FI F+ +T
Sbjct: 39 DTDFLMVVTTFIATVAFQIGTNPPGGVWQEDDKQGKYFAGKSIMATKSPSDFIGFLVTIT 98
Query: 99 VCFACSAMQFIVLLGKS---SEKSWSVSKSFIYFTMGSGISAIVVAYWSAIKALTPEAQ 153
CF SAMQF VL K K+WS S+ +Y TMG +S++ AY +++A TP+++
Sbjct: 99 ACFVFSAMQFAVLFLKKWPVGAKNWSFSRFILYSTMGLAVSSMGFAYGCSVRAYTPDSE 157
BLAST of IVF0012429 vs. NCBI nr
Match:
XP_008445596.1 (PREDICTED: uncharacterized protein LOC103488576 [Cucumis melo] >KAA0064718.1 ankyrin repeat-containing protein [Cucumis melo var. makuwa] >TYK00738.1 ankyrin repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 126 bits (317), Expect = 6.14e-33
Identity = 72/146 (49.32%), Postives = 95/146 (65.07%), Query Frame = 0
Query: 39 DRDFLMVATTFIAAMAFQAGTNPPGGVWQ-DDNSPNYEAGKSIMATKSPSLFISFMSGVT 98
D DFLMV TTFIA +AFQ GTNPPGGVWQ DD Y AGKSIMATKSPS F ++ +T
Sbjct: 37 DTDFLMVVTTFIATVAFQIGTNPPGGVWQEDDKQGKYFAGKSIMATKSPSDFSGYLVTIT 96
Query: 99 VCFACSAMQFIVLLGKS---SEKSWSVSKSFIYFTMGSGISAIVVAYWSAIKALTPEAQ- 158
CF SAMQF VL K K+WS S+ +Y TMG IS++ +AY +++A TP+++
Sbjct: 97 ACFVFSAMQFAVLFLKKWPVGAKNWSFSRFILYSTMGLAISSMGIAYGCSVRAYTPDSEE 156
Query: 159 MSHVIVMLKTTLVLSVVVLPISMYIE 179
+ ++ T L + + IS+Y+E
Sbjct: 157 KTRYVISFITMLGFPIGLAAISLYLE 182
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A1S4DVA8 | 8.0e-92 | 100.00 | uncharacterized protein LOC107990705 OS=Cucumis melo OX=3656 GN=LOC107990705 PE=... | [more] |
| A0A5D3BRK9 | 3.3e-69 | 100.00 | Ankyrin repeat-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN... | [more] |
| A0A5A7VAU9 | 8.5e-25 | 46.07 | Ankyrin repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
| A0A1S3BD33 | 8.5e-25 | 46.07 | uncharacterized protein LOC103488576 OS=Cucumis melo OX=3656 GN=LOC103488576 PE=... | [more] |
| A0A0A0KGU1 | 1.1e-24 | 46.47 | PGG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G363530 PE=4 SV... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_016899921.1 | 1.20e-120 | 100.00 | PREDICTED: uncharacterized protein LOC107990705 [Cucumis melo] | [more] |
| KAA0064719.1 | 2.90e-91 | 100.00 | ankyrin repeat-containing protein-like [Cucumis melo var. makuwa] >TYK00739.1 an... | [more] |
| XP_038884181.1 | 1.95e-36 | 51.01 | uncharacterized protein LOC120075089 [Benincasa hispida] | [more] |
| XP_011657373.1 | 3.25e-33 | 56.30 | uncharacterized protein LOC105435852 [Cucumis sativus] >KGN47597.1 hypothetical ... | [more] |
| XP_008445596.1 | 6.14e-33 | 49.32 | PREDICTED: uncharacterized protein LOC103488576 [Cucumis melo] >KAA0064718.1 ank... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
