IVF0012379 (gene) Melon (IVF77) v1

Overview


Name	IVF0012379
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	DUF4219 domain-containing protein
Location	chr02: 15254044 .. 15254325 (-)
RNA-Seq Expression	IVF0012379
Synteny	IVF0012379

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGGCTGTGATTATTGGAAAACAATTGAGCAAGACTATAAGATTGCTCCACTTTATGATAATCCAACATTAAATCAGATCAAGACTCACAAGGAAAGGATCACCATGAAGGCAAATGCAAGAGCTTACCTTTATGTAGTCGTGTATTCTACTATATTTAATAGACTTATGGCCTTGGAGTCAGCAAAGGAGATCTGGAAGTTTCTTAAAAGTGAGTATGAAGGTGATGAAAGGATTAAAGGCATGAAGGTGTTGAACTTGGTGCGAGAATTAGAGTGA

mRNA sequence

ATGGAGGGCTGTGATTATTGGAAAACAATTGAGCAAGACTATAAGATTGCTCCACTTTATGATAATCCAACATTAAATCAGATCAAGACTCACAAGGAAAGGATCACCATGAAGGCAAATGCAAGAGCTTACCTTTATGTAGTCGTGTATTCTACTATATTTAATAGACTTATGGCCTTGGAGTCAGCAAAGGAGATCTGGAAGTTTCTTAAAAGTGAGTATGAAGGTGATGAAAGGATTAAAGGCATGAAGGTGTTGAACTTGGTGCGAGAATTAGAGTGA

Coding sequence (CDS)

ATGGAGGGCTGTGATTATTGGAAAACAATTGAGCAAGACTATAAGATTGCTCCACTTTATGATAATCCAACATTAAATCAGATCAAGACTCACAAGGAAAGGATCACCATGAAGGCAAATGCAAGAGCTTACCTTTATGTAGTCGTGTATTCTACTATATTTAATAGACTTATGGCCTTGGAGTCAGCAAAGGAGATCTGGAAGTTTCTTAAAAGTGAGTATGAAGGTGATGAAAGGATTAAAGGCATGAAGGTGTTGAACTTGGTGCGAGAATTAGAGTGA

Protein sequence

MEGCDYWKTIEQDYKIAPLYDNPTLNQIKTHKERITMKANARAYLYVVVYSTIFNRLMALESAKEIWKFLKSEYEGDERIKGMKVLNLVRELE

Homology

[Close]

BLAST of IVF0012379 vs. ExPASy TrEMBL
Match: A0A5D3BE46 (Putative transposon Ty5-1 protein YCL075W family OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold222G00220 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.6e-40
Identity = 85/92 (92.39%), Postives = 87/92 (94.57%), Query Frame = 0


Query: 1  MEGCDYWKTIEQDYKIAPLYDNPTLNQIKTHKERITMKANARAYLYVVVYSTIFNRLMAL 60
          MEGCDYWKTIEQDYKIAPLYDNPTLNQIKTHK+RITMKANARAYLYVVVYSTIFNRLMAL
Sbjct: 5  MEGCDYWKTIEQDYKIAPLYDNPTLNQIKTHKKRITMKANARAYLYVVVYSTIFNRLMAL 64

Query: 61 ESAKEIWKFLKSEYEGDERIKGMKVLNLVREL 93
          ESAKEIWKFLKSEYEGDERIKGMK   L  +L
Sbjct: 65 ESAKEIWKFLKSEYEGDERIKGMKARALGTDL 96

[Close]

BLAST of IVF0012379 vs. ExPASy TrEMBL
Match: A0A6J1DWT9 (uncharacterized protein LOC111025149 OS=Momordica charantia OX=3673 GN=LOC111025149 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 1.0e-34
Identity = 74/93 (79.57%), Postives = 82/93 (88.17%), Query Frame = 0


Query: 1   MEGCDYWKTIEQDYKIAPLYDNPTLNQIKTHKERITMKANARAYLYVVVYSTIFNRLMAL 60
           MEGCDYW+ IEQDY+IAPL DNPT++QIKTHKER+T KA ARA LY  V   IFNR+MAL
Sbjct: 32  MEGCDYWEAIEQDYEIAPLPDNPTMHQIKTHKERVTRKAKARACLYAAVSPAIFNRIMAL 91

Query: 61  ESAKEIWKFLKSEYEGDERIKGMKVLNLVRELE 94
           +SAKEIW+FLKSEYEGDERIKGMKVLNLVRE E
Sbjct: 92  KSAKEIWEFLKSEYEGDERIKGMKVLNLVREFE 124

[Close]

BLAST of IVF0012379 vs. ExPASy TrEMBL
Match: A0A6J1DXX3 (uncharacterized protein LOC111024525 OS=Momordica charantia OX=3673 GN=LOC111024525 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.7e-34
Identity = 73/93 (78.49%), Postives = 82/93 (88.17%), Query Frame = 0


Query: 1   MEGCDYWKTIEQDYKIAPLYDNPTLNQIKTHKERITMKANARAYLYVVVYSTIFNRLMAL 60
           MEGCDYW+ IEQDY+I+PL DNPT++QIKTHKER+T KA AR  LY  V  TIFNR+MAL
Sbjct: 32  MEGCDYWEAIEQDYEISPLPDNPTMHQIKTHKERVTRKAKARTCLYAAVSPTIFNRIMAL 91

Query: 61  ESAKEIWKFLKSEYEGDERIKGMKVLNLVRELE 94
           +SAKEIW+FLKSEYEGDERIKGMKVLNLVRE E
Sbjct: 92  KSAKEIWEFLKSEYEGDERIKGMKVLNLVREFE 124

[Close]

BLAST of IVF0012379 vs. ExPASy TrEMBL
Match: A0A6J1DDR0 (uncharacterized protein LOC111020109 OS=Momordica charantia OX=3673 GN=LOC111020109 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 3.8e-34
Identity = 73/93 (78.49%), Postives = 82/93 (88.17%), Query Frame = 0


Query: 1   MEGCDYWKTIEQDYKIAPLYDNPTLNQIKTHKERITMKANARAYLYVVVYSTIFNRLMAL 60
           MEGC+YW+ IEQDY+IAPL DNPT++QIKTHKER+T KA ARA LY  V   IFNR+MAL
Sbjct: 32  MEGCNYWEAIEQDYEIAPLPDNPTMHQIKTHKERVTRKAKARACLYAAVSPAIFNRIMAL 91

Query: 61  ESAKEIWKFLKSEYEGDERIKGMKVLNLVRELE 94
           +SAKEIW+FLKSEYEGDERIKGMKVLNLVRE E
Sbjct: 92  KSAKEIWEFLKSEYEGDERIKGMKVLNLVREFE 124

[Close]

BLAST of IVF0012379 vs. ExPASy TrEMBL
Match: A0A5A7TMU3 (DUF4219 domain-containing protein/UBN2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold588G00260 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.9e-33
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 0


Query: 1  MEGCDYWKTIEQDYKIAPLYDNPTLNQIKTHKERITMKANARAYLYVVVYSTIFNRLMAL 60
          MEGCDYWKTIEQDYKIAPLYDNPTLNQIKTHKERITMKANARAYLYVVVYSTIFNRLMAL
Sbjct: 5  MEGCDYWKTIEQDYKIAPLYDNPTLNQIKTHKERITMKANARAYLYVVVYSTIFNRLMAL 64

Query: 61 ESAKEIWKFLKSEYEG 77
          ESAKEIWKFLK++  G
Sbjct: 65 ESAKEIWKFLKNKLIG 80

[Close]

BLAST of IVF0012379 vs. NCBI nr
Match: TYJ98110.1 (putative transposon Ty5-1 protein YCL075W family [Cucumis melo var. makuwa])

HSP 1 Score: 175 bits (444), Expect = 1.64e-52
Identity = 85/92 (92.39%), Postives = 87/92 (94.57%), Query Frame = 0


Query: 1  MEGCDYWKTIEQDYKIAPLYDNPTLNQIKTHKERITMKANARAYLYVVVYSTIFNRLMAL 60
          MEGCDYWKTIEQDYKIAPLYDNPTLNQIKTHK+RITMKANARAYLYVVVYSTIFNRLMAL
Sbjct: 5  MEGCDYWKTIEQDYKIAPLYDNPTLNQIKTHKKRITMKANARAYLYVVVYSTIFNRLMAL 64

Query: 61 ESAKEIWKFLKSEYEGDERIKGMKVLNLVREL 92
          ESAKEIWKFLKSEYEGDERIKGMK   L  +L
Sbjct: 65 ESAKEIWKFLKSEYEGDERIKGMKARALGTDL 96

[Close]

BLAST of IVF0012379 vs. NCBI nr
Match: XP_022157914.1 (uncharacterized protein LOC111024525 [Momordica charantia])

HSP 1 Score: 155 bits (391), Expect = 5.03e-46
Identity = 73/93 (78.49%), Postives = 82/93 (88.17%), Query Frame = 0


Query: 1   MEGCDYWKTIEQDYKIAPLYDNPTLNQIKTHKERITMKANARAYLYVVVYSTIFNRLMAL 60
           MEGCDYW+ IEQDY+I+PL DNPT++QIKTHKER+T KA AR  LY  V  TIFNR+MAL
Sbjct: 32  MEGCDYWEAIEQDYEISPLPDNPTMHQIKTHKERVTRKAKARTCLYAAVSPTIFNRIMAL 91

Query: 61  ESAKEIWKFLKSEYEGDERIKGMKVLNLVRELE 93
           +SAKEIW+FLKSEYEGDERIKGMKVLNLVRE E
Sbjct: 92  KSAKEIWEFLKSEYEGDERIKGMKVLNLVREFE 124

[Close]

BLAST of IVF0012379 vs. NCBI nr
Match: XP_038902321.1 (uncharacterized protein LOC120088957 [Benincasa hispida])

HSP 1 Score: 155 bits (392), Expect = 1.05e-45
Identity = 72/93 (77.42%), Postives = 82/93 (88.17%), Query Frame = 0


Query: 1   MEGCDYWKTIEQDYKIAPLYDNPTLNQIKTHKERITMKANARAYLYVVVYSTIFNRLMAL 60
           MEGCDYW+ IEQDY+IAP  DNPT++QIKTHKER+T KA +RA LY  V+ TIFN++M L
Sbjct: 32  MEGCDYWEAIEQDYEIAPFPDNPTIHQIKTHKERVTRKAKSRACLYTAVFPTIFNKIMVL 91

Query: 61  ESAKEIWKFLKSEYEGDERIKGMKVLNLVRELE 93
           +SAKEIWKFLKSEYEGDERIKGMKVLNLV ELE
Sbjct: 92  KSAKEIWKFLKSEYEGDERIKGMKVLNLVHELE 124

[Close]

BLAST of IVF0012379 vs. NCBI nr
Match: KAA0043366.1 (DUF4219 domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 152 bits (384), Expect = 1.10e-45
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 0


Query: 1  MEGCDYWKTIEQDYKIAPLYDNPTLNQIKTHKERITMKANARAYLYVVVYSTIFNRLMAL 60
          MEGCDYWKTIEQDYKIAPLYDNPTLNQIKTHKERITMKANARAYLYVVVYSTIFNRLMAL
Sbjct: 5  MEGCDYWKTIEQDYKIAPLYDNPTLNQIKTHKERITMKANARAYLYVVVYSTIFNRLMAL 64

Query: 61 ESAKEIWKFLKSEYEG 76
          ESAKEIWKFLK++  G
Sbjct: 65 ESAKEIWKFLKNKLIG 80

[Close]

BLAST of IVF0012379 vs. NCBI nr
Match: XP_022152365.1 (uncharacterized protein LOC111020109 [Momordica charantia])

HSP 1 Score: 154 bits (388), Expect = 7.22e-45
Identity = 73/93 (78.49%), Postives = 82/93 (88.17%), Query Frame = 0


Query: 1   MEGCDYWKTIEQDYKIAPLYDNPTLNQIKTHKERITMKANARAYLYVVVYSTIFNRLMAL 60
           MEGC+YW+ IEQDY+IAPL DNPT++QIKTHKER+T KA ARA LY  V   IFNR+MAL
Sbjct: 32  MEGCNYWEAIEQDYEIAPLPDNPTMHQIKTHKERVTRKAKARACLYAAVSPAIFNRIMAL 91

Query: 61  ESAKEIWKFLKSEYEGDERIKGMKVLNLVRELE 93
           +SAKEIW+FLKSEYEGDERIKGMKVLNLVRE E
Sbjct: 92  KSAKEIWEFLKSEYEGDERIKGMKVLNLVREFE 124

The following BLAST results are available for this feature:

BLAST of IVF0012379 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0012379 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BE46	1.6e-40	92.39	Putative transposon Ty5-1 protein YCL075W family OS=Cucumis melo var. makuwa OX=...	[more]
A0A6J1DWT9	1.0e-34	79.57	uncharacterized protein LOC111025149 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DXX3	1.7e-34	78.49	uncharacterized protein LOC111024525 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A6J1DDR0	3.8e-34	78.49	uncharacterized protein LOC111020109 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A5A7TMU3	1.9e-33	94.74	DUF4219 domain-containing protein/UBN2 domain-containing protein OS=Cucumis melo...	[more]

BLAST of IVF0012379 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ98110.1	1.64e-52	92.39	putative transposon Ty5-1 protein YCL075W family [Cucumis melo var. makuwa]	[more]
XP_022157914.1	5.03e-46	78.49	uncharacterized protein LOC111024525 [Momordica charantia]	[more]
XP_038902321.1	1.05e-45	77.42	uncharacterized protein LOC120088957 [Benincasa hispida]	[more]
KAA0043366.1	1.10e-45	94.74	DUF4219 domain-containing protein/UBN2 domain-containing protein [Cucumis melo v...	[more]
XP_022152365.1	7.22e-45	78.49	uncharacterized protein LOC111020109 [Momordica charantia]	[more]

BLAST of IVF0012379 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35317	OS04G0629600 PROTEIN	coord: 1..93
None	No IPR available	PANTHER	PTHR35317:SF11	SUBFAMILY NOT NAMED	coord: 1..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0012379.2	IVF0012379.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding