IVF0012330 (gene) Melon (IVF77) v1

Overview


Name	IVF0012330
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Ty1-copia retrotransposon protein
Location	chr12: 4028658 .. 4032698 (-)
RNA-Seq Expression	IVF0012330
Synteny	IVF0012330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGATCAAGACTTCCAACAAAATCCTACCGGACCTGTCTAAACTTGAGCCACTCGACGGAACAAACTACCGCCGTTGGTCCCAAAAGTTGCTAATCTTCTTTGAGCAACTTGAAGTCGATTATGTCCTCACCACAGATCTCCCAACATCTGACCCCCCAACTACCACGTCAACATCCTCTGATCCAGAATCATCTACGGGACCTCTTACAGCTGTTGCTGTCACTGATCAAGTAAAGAAGGACCAAGTGATTGATCCTGAAAAATATGCAAAGGACAACAAGACCGTTCGAGGACACCTGTTAAATCATATGTCTGATCCGATGTTTGATCTCTTCGTAGTCCAAAAATCTGCCAAGGACATCTGGAGCACCCTGGAATCACGGTATGGAGGAGATGATGCTGGACGGAAAAAATATGTGGTTGGAAAATGGCTACAATTCCAGATGAATGACGACAAACCAGTCGTGGAACAAATTCATGAGTACGAGAACTTGGTGGCAAACGTCCTGTCTGAAGGCATGAAGATGTGCGAAATACTTCAAGCAAATGTCCTGTTGGAAAAATTTCCTCCGTCCTGGAATGACTACCGTAATCATCTCAAGCACAAGAAGAAGGATCTAAGGCTCCCAGAACTCATCAGTCATATGCGCACGGAAGAAGCCAACAGACTGAAAGATAAGTTAGCCTCCCAAAATTTAAATTCAGTTAATGCTAACTTAGTCGAATCATCCTTTGTGAACAGAGACAGAACGAAGCAGGAAAAAGGACATAAAGGGAAAAACTCAGAGAAGAGACAATTCAAGACCACTGGGGGACAAATTAAGAAGAAAAAGCTGGTCTGCTACGTGTGCGGAAAGGAAGGGCACAAATCATACCAGTGCAACCAGAGGAAAGGGAGGCCAAGTCAGAAACCAACACCTCAAGCCAATCTAGCAGAGCAAGACAGTGAGATCATAGCAGCCATAGTAGAAGCCAATCTGATAGAAAACAAGACGGACTGGATTCTCGACACTGGAGCCTCGAGACACTTCTGCACCAATCGTGAACTACTCCATGACTACGAAGACACTGCTGATGGAGAATGCGTGTTCATGGGAAACTCAGCCACTGCAGGAGTAATCGGGAAAGGGAAGGTTATTTTAAAGTTAACTTCTGGCAAAACTTTATCTTTAAGTAATGTTCTATATGTCCCTTCCCTACGTAGGAACCTGGTGTCTGGGAGTCTGTTGAATCGGGCCGGGCTTAAAATTGTGCTAGAAGGTGACAAAGTTGTCCTCACGAAAAATGGAGATTTTGTCGGTAAGGGGTATCTGTCTAATGGCCTGTTTGTGCTGAACACTATTTCTATGAATGCAAATGCTTCCAGTTCTGCTTACTTGATTGAATCTGCAAACTTATGGCATGGTAGACTAGGACATGTGAACTTTGCATCAATTAGAAAACTTAAAGACATGAGACTCATTAATACCTCTGAGACGCATGAAACTGGTAAATGTTCTATTTGCATAGAAAGTAAATTCCATAAGAAGCCCTTCAAACCAGTTGAATATAGAACTACTGAGTTGTTAGAATTAATTCACTCAGATCTAGCCGACTTTAGAACCACTGCCAGTAGAGGTGGTAAAAACTACTATGTATCCTTTGTTGATGATTACTCTAGATACACTAAGATATACCTGATAAGAACAAAAAATGAAGCTGTCAGTATGTTTATAAAATTCAAGGCAGAATCTGAGAATCAGTTAGGAAAAAGGATAAAAAGATTAAGATCAGATAGAGGTGGTGAGTATTCCGATAAAACTCTTAAAGAATTTTGTGAATCAAATGGTATCATCCATGAATTTACTGCACCCTACTCACCACAACAAAATGGCATAGCAGAACGAAAAAATAGAACTCTTAAAGAAATGATGAATGCCATGTTATTAAGCTCTGGTCTATCTGATAATATGTGGGGGGAAGCCGTGTTGTCTGCATGTTTTATTCTTAACAGGATTCCCCACAAAAGGCTAGACAAAACTCCATACGAACTCTGGAAAGGACATGCACCAAATCTTTCCTACCTCAAGGTCTGGGGATGCTTGGCTAAGGTACCACTTCCTGCATTGAAGAAAACTACGGTAGGACCTAAAACCTTTGACTGCATTTTTATCGGGTATGCTCAAAATAGTGCTGCATATAGGTTTATGTGTTTAAATGACAAAACTATAAATGAATCTAGAGATGCAGAATTCTTTGAGCATGTTTTTCCGTTAAAACAATCATTGTATGCTCCTAGCCTTTCTAACAGAATGCATGATCCTGAAATTGTTAGTGAAATACCTGTTTCTGAAACTGTTGATACACCAAACCTAAGTTGTGAATTAGAACCTAGGAGAAGTAAAAGACAAAGAACTGAGAAAAGTTTCGGTCCAGATTTCCTAAGCACCTTCATAGTGGAAAGGCGTGATGAAATTGACTGTAACTTCACAAACTTGTTCTTAATAGATGAGGATCCCAAAACTTACCAAGAAGCGCTAAACTCTGTAGATTCAAGGATGTGGAAAGAGGCCATTAAAAGTGAATTGGACTCACTGGCCATGAATCATACATGGGAACTGGTGGATCTTCCTATGGGAAACAAGCCAATTAGATGTAAGTGGATCTTTAAAAGGAAAACAAAACCAAATGGATTAATAGAAAGATACAAGGCTAGATTAGTGGTAGTAGGATATACCCAAAAACAAGGTGTTGACTATTTCGACACCTATTCCCCTGTAACTAAAATAACCACAATTAGGGCCTTGATTGCTTTGGCCGCAATACATAATCTTCTTATTCATCAAATGGACGTAAAAACAGCCTTTTTAAATGGCAACTTAGAAGAAGAAATTTATATGACACAACCAGAAGGCTTTAAAATCTCTGGGCAAGAAAACAAAGTGTGTAAACTGAGAAAGTCCTTATACGGTCTCAAACAAGCTCCCAAACAGTGGTACGAAAAATTTAACAACACGTTGATAACCAATGGATTTAAAATAAATTCCTCTGACACGTGTGTTTATTCAAAGATGGTTGGAGCTGATTGCATACTAATATGTCTATACGTTGACGACATGTTAATCTTTGGAACAAACATGGAGCTAATAACTGACACTAAATATTTCCTCTCGTCACACTTTGAAATGAAAGACCTGGGAGAAGCAGACGTAATTCTAGGTGTTAAAATCAGGAAAAACAAAACCAGTTTGTCTCTATGTCAATCCCATTACGTAGAGAAAATACTAAAGAAGTTTGACTCCTTTGATGTTTCTCCTGTGAGAACTCCCTTTGATGCTAGTAAACATCTTAAGAAGAATAAAGGAGATAGTGTGTCTCAACCAGAATATGCAAAGATCATCGGCAGTGTGATGTATTTAATGAACTACACTAGACCAGATATTGCATATGCTGTCAGTAGATTGAGTAGATATACACACAATCCTAATAGATACCACTGGGATGCCTTGCGCCATCTGTTGAGATATCTTAAAGGAACGATAGATTACTGTCTACACTTCAAGAAATTTCCTGCCGTGCTAGAAGGATATTGTGATGCAAACTGGGTCACAGACAATGATGAGGTTAACTCCACTAGTGGGTATGTATTTTTACTCGGAGGTGGAGCTATATCTTGGAAGTCTACAAAACAGACTTGTATAGCCAGATCCACGATGGAATCCGAGTTCATAGCACTAGAGTTGGCAGGACAGGAGGCTGAGTGGATCAAAAACCTACTAGGAGATGTACCATTGTGGGGGACATCTGTACCGGTGTCCATACAGTGTGATTCGCAAGCCGCGATATGTACTGCCAAGAACAGTGTTTATAATGGTAAAAGTAGACACGTACGTCTTAGGCATGCAGTAGTAAAACAACTGCTAAAGGAAGGAACCATCTCCTTGGAATTTGTTCGATCTGAGAAGAACTTGGCTGATCCTTTAACCAAAGGACTAACAAGGAAAATGGTATTAGATTCCTCTGTGAACATGGGCCTAAAGCCCTTCGGAGATCCATAG

mRNA sequence

ATGTCGATCAAGACTTCCAACAAAATCCTACCGGACCTGTCTAAACTTGAGCCACTCGACGGAACAAACTACCGCCGTTGGTCCCAAAAGTTGCTAATCTTCTTTGAGCAACTTGAAGTCGATTATGTCCTCACCACAGATCTCCCAACATCTGACCCCCCAACTACCACGTCAACATCCTCTGATCCAGAATCATCTACGGGACCTCTTACAGCTGTTGCTGTCACTGATCAAGTAAAGAAGGACCAAGTGATTGATCCTGAAAAATATGCAAAGGACAACAAGACCGTTCGAGGACACCTGTTAAATCATATGTCTGATCCGATGTTTGATCTCTTCGTAGTCCAAAAATCTGCCAAGGACATCTGGAGCACCCTGGAATCACGGTATGGAGGAGATGATGCTGGACGGAAAAAATATGTGGTTGGAAAATGGCTACAATTCCAGATGAATGACGACAAACCAGTCGTGGAACAAATTCATGAGTACGAGAACTTGGTGGCAAACGTCCTGTCTGAAGGCATGAAGATGTGCGAAATACTTCAAGCAAATGTCCTGTTGGAAAAATTTCCTCCGTCCTGGAATGACTACCGTAATCATCTCAAGCACAAGAAGAAGGATCTAAGGCTCCCAGAACTCATCAGTCATATGCGCACGGAAGAAGCCAACAGACTGAAAGATAAGTTAGCCTCCCAAAATTTAAATTCAGTTAATGCTAACTTAGTCGAATCATCCTTTGTGAACAGAGACAGAACGAAGCAGGAAAAAGGACATAAAGGGAAAAACTCAGAGAAGAGACAATTCAAGACCACTGGGGGACAAATTAAGAAGAAAAAGCTGGTCTGCTACGTGTGCGGAAAGGAAGGGCACAAATCATACCAGTGCAACCAGAGGAAAGGGAGGCCAAGTCAGAAACCAACACCTCAAGCCAATCTAGCAGAGCAAGACAGTGAGATCATAGCAGCCATAGTAGAAGCCAATCTGATAGAAAACAAGACGGACTGGATTCTCGACACTGGAGCCTCGAGACACTTCTGCACCAATCGTGAACTACTCCATGACTACGAAGACACTGCTGATGGAGAATGCGTGTTCATGGGAAACTCAGCCACTGCAGGAGTAATCGGGAAAGGGAAGGTTATTTTAAAGTTAACTTCTGGCAAAACTTTATCTTTAAGTAATGTTCTATATGTCCCTTCCCTACGTAGGAACCTGGTGTCTGGGAGTCTGTTGAATCGGGCCGGGCTTAAAATTGTGCTAGAAGGTGACAAAGTTGTCCTCACGAAAAATGGAGATTTTGTCGGTAAGGGGTATCTGTCTAATGGCCTGTTTGTGCTGAACACTATTTCTATGAATGCAAATGCTTCCAGTTCTGCTTACTTGATTGAATCTGCAAACTTATGGCATGGTAGACTAGGACATGTGAACTTTGCATCAATTAGAAAACTTAAAGACATGAGACTCATTAATACCTCTGAGACGCATGAAACTGGTAAATGTTCTATTTGCATAGAAAGTAAATTCCATAAGAAGCCCTTCAAACCAGTTGAATATAGAACTACTGAGTTGTTAGAATTAATTCACTCAGATCTAGCCGACTTTAGAACCACTGCCAGTAGAGGTGGTAAAAACTACTATGTATCCTTTGTTGATGATTACTCTAGATACACTAAGATATACCTGATAAGAACAAAAAATGAAGCTGTCAGTATGTTTATAAAATTCAAGGCAGAATCTGAGAATCAGTTAGGAAAAAGGATAAAAAGATTAAGATCAGATAGAGGTGGTGAGTATTCCGATAAAACTCTTAAAGAATTTTGTGAATCAAATGGTATCATCCATGAATTTACTGCACCCTACTCACCACAACAAAATGGCATAGCAGAACGAAAAAATAGAACTCTTAAAGAAATGATGAATGCCATGTTATTAAGCTCTGGTCTATCTGATAATATGTGGGGGGAAGCCGTGTTGTCTGCATGTTTTATTCTTAACAGGATTCCCCACAAAAGGCTAGACAAAACTCCATACGAACTCTGGAAAGGACATGCACCAAATCTTTCCTACCTCAAGGTCTGGGGATGCTTGGCTAAGGTACCACTTCCTGCATTGAAGAAAACTACGGTAGGACCTAAAACCTTTGACTGCATTTTTATCGGGTATGCTCAAAATAGTGCTGCATATAGGTTTATGTGTTTAAATGACAAAACTATAAATGAATCTAGAGATGCAGAATTCTTTGAGCATGTTTTTCCGTTAAAACAATCATTGTATGCTCCTAGCCTTTCTAACAGAATGCATGATCCTGAAATTGTTAGTGAAATACCTGTTTCTGAAACTGTTGATACACCAAACCTAAGTTGTGAATTAGAACCTAGGAGAAGTAAAAGACAAAGAACTGAGAAAAGTTTCGGTCCAGATTTCCTAAGCACCTTCATAGTGGAAAGGCGTGATGAAATTGACTGTAACTTCACAAACTTGTTCTTAATAGATGAGGATCCCAAAACTTACCAAGAAGCGCTAAACTCTGTAGATTCAAGGATGTGGAAAGAGGCCATTAAAAGTGAATTGGACTCACTGGCCATGAATCATACATGGGAACTGGTGGATCTTCCTATGGGAAACAAGCCAATTAGATGTAAGTGGATCTTTAAAAGGAAAACAAAACCAAATGGATTAATAGAAAGATACAAGGCTAGATTAGTGGTAGTAGGATATACCCAAAAACAAGGTGTTGACTATTTCGACACCTATTCCCCTGTAACTAAAATAACCACAATTAGGGCCTTGATTGCTTTGGCCGCAATACATAATCTTCTTATTCATCAAATGGACGTAAAAACAGCCTTTTTAAATGGCAACTTAGAAGAAGAAATTTATATGACACAACCAGAAGGCTTTAAAATCTCTGGGCAAGAAAACAAAGTGTGTAAACTGAGAAAGTCCTTATACGGTCTCAAACAAGCTCCCAAACAGTGGTACGAAAAATTTAACAACACGTTGATAACCAATGGATTTAAAATAAATTCCTCTGACACGTGTGTTTATTCAAAGATGGTTGGAGCTGATTGCATACTAATATGTCTATACGTTGACGACATGTTAATCTTTGGAACAAACATGGAGCTAATAACTGACACTAAATATTTCCTCTCGTCACACTTTGAAATGAAAGACCTGGGAGAAGCAGACGTAATTCTAGGTGTTAAAATCAGGAAAAACAAAACCAGTTTGTCTCTATGTCAATCCCATTACGTAGAGAAAATACTAAAGAAGTTTGACTCCTTTGATGTTTCTCCTGTGAGAACTCCCTTTGATGCTAGTAAACATCTTAAGAAGAATAAAGGAGATAGTGTGTCTCAACCAGAATATGCAAAGATCATCGGCAGTGTGATGTATTTAATGAACTACACTAGACCAGATATTGCATATGCTGTCAGTAGATTGAGTAGATATACACACAATCCTAATAGATACCACTGGGATGCCTTGCGCCATCTGTTGAGATATCTTAAAGGAACGATAGATTACTGTCTACACTTCAAGAAATTTCCTGCCGTGCTAGAAGGATATTGTGATGCAAACTGGGTCACAGACAATGATGAGGTTAACTCCACTAGTGGGTATGTATTTTTACTCGGAGGTGGAGCTATATCTTGGAAGTCTACAAAACAGACTTGTATAGCCAGATCCACGATGGAATCCGAGTTCATAGCACTAGAGTTGGCAGGACAGGAGGCTGAGTGGATCAAAAACCTACTAGGAGATGTACCATTGTGGGGGACATCTGTACCGGTGTCCATACAGTGTGATTCGCAAGCCGCGATATGTACTGCCAAGAACAGTGTTTATAATGGTAAAAGTAGACACGTACGTCTTAGGCATGCAGTAGTAAAACAACTGCTAAAGGAAGGAACCATCTCCTTGGAATTTGTTCGATCTGAGAAGAACTTGGCTGATCCTTTAACCAAAGGACTAACAAGGAAAATGGTATTAGATTCCTCTGTGAACATGGGCCTAAAGCCCTTCGGAGATCCATAG

Coding sequence (CDS)

ATGTCGATCAAGACTTCCAACAAAATCCTACCGGACCTGTCTAAACTTGAGCCACTCGACGGAACAAACTACCGCCGTTGGTCCCAAAAGTTGCTAATCTTCTTTGAGCAACTTGAAGTCGATTATGTCCTCACCACAGATCTCCCAACATCTGACCCCCCAACTACCACGTCAACATCCTCTGATCCAGAATCATCTACGGGACCTCTTACAGCTGTTGCTGTCACTGATCAAGTAAAGAAGGACCAAGTGATTGATCCTGAAAAATATGCAAAGGACAACAAGACCGTTCGAGGACACCTGTTAAATCATATGTCTGATCCGATGTTTGATCTCTTCGTAGTCCAAAAATCTGCCAAGGACATCTGGAGCACCCTGGAATCACGGTATGGAGGAGATGATGCTGGACGGAAAAAATATGTGGTTGGAAAATGGCTACAATTCCAGATGAATGACGACAAACCAGTCGTGGAACAAATTCATGAGTACGAGAACTTGGTGGCAAACGTCCTGTCTGAAGGCATGAAGATGTGCGAAATACTTCAAGCAAATGTCCTGTTGGAAAAATTTCCTCCGTCCTGGAATGACTACCGTAATCATCTCAAGCACAAGAAGAAGGATCTAAGGCTCCCAGAACTCATCAGTCATATGCGCACGGAAGAAGCCAACAGACTGAAAGATAAGTTAGCCTCCCAAAATTTAAATTCAGTTAATGCTAACTTAGTCGAATCATCCTTTGTGAACAGAGACAGAACGAAGCAGGAAAAAGGACATAAAGGGAAAAACTCAGAGAAGAGACAATTCAAGACCACTGGGGGACAAATTAAGAAGAAAAAGCTGGTCTGCTACGTGTGCGGAAAGGAAGGGCACAAATCATACCAGTGCAACCAGAGGAAAGGGAGGCCAAGTCAGAAACCAACACCTCAAGCCAATCTAGCAGAGCAAGACAGTGAGATCATAGCAGCCATAGTAGAAGCCAATCTGATAGAAAACAAGACGGACTGGATTCTCGACACTGGAGCCTCGAGACACTTCTGCACCAATCGTGAACTACTCCATGACTACGAAGACACTGCTGATGGAGAATGCGTGTTCATGGGAAACTCAGCCACTGCAGGAGTAATCGGGAAAGGGAAGGTTATTTTAAAGTTAACTTCTGGCAAAACTTTATCTTTAAGTAATGTTCTATATGTCCCTTCCCTACGTAGGAACCTGGTGTCTGGGAGTCTGTTGAATCGGGCCGGGCTTAAAATTGTGCTAGAAGGTGACAAAGTTGTCCTCACGAAAAATGGAGATTTTGTCGGTAAGGGGTATCTGTCTAATGGCCTGTTTGTGCTGAACACTATTTCTATGAATGCAAATGCTTCCAGTTCTGCTTACTTGATTGAATCTGCAAACTTATGGCATGGTAGACTAGGACATGTGAACTTTGCATCAATTAGAAAACTTAAAGACATGAGACTCATTAATACCTCTGAGACGCATGAAACTGGTAAATGTTCTATTTGCATAGAAAGTAAATTCCATAAGAAGCCCTTCAAACCAGTTGAATATAGAACTACTGAGTTGTTAGAATTAATTCACTCAGATCTAGCCGACTTTAGAACCACTGCCAGTAGAGGTGGTAAAAACTACTATGTATCCTTTGTTGATGATTACTCTAGATACACTAAGATATACCTGATAAGAACAAAAAATGAAGCTGTCAGTATGTTTATAAAATTCAAGGCAGAATCTGAGAATCAGTTAGGAAAAAGGATAAAAAGATTAAGATCAGATAGAGGTGGTGAGTATTCCGATAAAACTCTTAAAGAATTTTGTGAATCAAATGGTATCATCCATGAATTTACTGCACCCTACTCACCACAACAAAATGGCATAGCAGAACGAAAAAATAGAACTCTTAAAGAAATGATGAATGCCATGTTATTAAGCTCTGGTCTATCTGATAATATGTGGGGGGAAGCCGTGTTGTCTGCATGTTTTATTCTTAACAGGATTCCCCACAAAAGGCTAGACAAAACTCCATACGAACTCTGGAAAGGACATGCACCAAATCTTTCCTACCTCAAGGTCTGGGGATGCTTGGCTAAGGTACCACTTCCTGCATTGAAGAAAACTACGGTAGGACCTAAAACCTTTGACTGCATTTTTATCGGGTATGCTCAAAATAGTGCTGCATATAGGTTTATGTGTTTAAATGACAAAACTATAAATGAATCTAGAGATGCAGAATTCTTTGAGCATGTTTTTCCGTTAAAACAATCATTGTATGCTCCTAGCCTTTCTAACAGAATGCATGATCCTGAAATTGTTAGTGAAATACCTGTTTCTGAAACTGTTGATACACCAAACCTAAGTTGTGAATTAGAACCTAGGAGAAGTAAAAGACAAAGAACTGAGAAAAGTTTCGGTCCAGATTTCCTAAGCACCTTCATAGTGGAAAGGCGTGATGAAATTGACTGTAACTTCACAAACTTGTTCTTAATAGATGAGGATCCCAAAACTTACCAAGAAGCGCTAAACTCTGTAGATTCAAGGATGTGGAAAGAGGCCATTAAAAGTGAATTGGACTCACTGGCCATGAATCATACATGGGAACTGGTGGATCTTCCTATGGGAAACAAGCCAATTAGATGTAAGTGGATCTTTAAAAGGAAAACAAAACCAAATGGATTAATAGAAAGATACAAGGCTAGATTAGTGGTAGTAGGATATACCCAAAAACAAGGTGTTGACTATTTCGACACCTATTCCCCTGTAACTAAAATAACCACAATTAGGGCCTTGATTGCTTTGGCCGCAATACATAATCTTCTTATTCATCAAATGGACGTAAAAACAGCCTTTTTAAATGGCAACTTAGAAGAAGAAATTTATATGACACAACCAGAAGGCTTTAAAATCTCTGGGCAAGAAAACAAAGTGTGTAAACTGAGAAAGTCCTTATACGGTCTCAAACAAGCTCCCAAACAGTGGTACGAAAAATTTAACAACACGTTGATAACCAATGGATTTAAAATAAATTCCTCTGACACGTGTGTTTATTCAAAGATGGTTGGAGCTGATTGCATACTAATATGTCTATACGTTGACGACATGTTAATCTTTGGAACAAACATGGAGCTAATAACTGACACTAAATATTTCCTCTCGTCACACTTTGAAATGAAAGACCTGGGAGAAGCAGACGTAATTCTAGGTGTTAAAATCAGGAAAAACAAAACCAGTTTGTCTCTATGTCAATCCCATTACGTAGAGAAAATACTAAAGAAGTTTGACTCCTTTGATGTTTCTCCTGTGAGAACTCCCTTTGATGCTAGTAAACATCTTAAGAAGAATAAAGGAGATAGTGTGTCTCAACCAGAATATGCAAAGATCATCGGCAGTGTGATGTATTTAATGAACTACACTAGACCAGATATTGCATATGCTGTCAGTAGATTGAGTAGATATACACACAATCCTAATAGATACCACTGGGATGCCTTGCGCCATCTGTTGAGATATCTTAAAGGAACGATAGATTACTGTCTACACTTCAAGAAATTTCCTGCCGTGCTAGAAGGATATTGTGATGCAAACTGGGTCACAGACAATGATGAGGTTAACTCCACTAGTGGGTATGTATTTTTACTCGGAGGTGGAGCTATATCTTGGAAGTCTACAAAACAGACTTGTATAGCCAGATCCACGATGGAATCCGAGTTCATAGCACTAGAGTTGGCAGGACAGGAGGCTGAGTGGATCAAAAACCTACTAGGAGATGTACCATTGTGGGGGACATCTGTACCGGTGTCCATACAGTGTGATTCGCAAGCCGCGATATGTACTGCCAAGAACAGTGTTTATAATGGTAAAAGTAGACACGTACGTCTTAGGCATGCAGTAGTAAAACAACTGCTAAAGGAAGGAACCATCTCCTTGGAATTTGTTCGATCTGAGAAGAACTTGGCTGATCCTTTAACCAAAGGACTAACAAGGAAAATGGTATTAGATTCCTCTGTGAACATGGGCCTAAAGCCCTTCGGAGATCCATAG

Protein sequence

MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTAVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMNDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPPSWNDYRNHLKHKKKDLRLPELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNRDRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDDYSRYTKIYLIRTKNEAVSMFIKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSACFILNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSETVDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVDSRMWKEAIKSELDSLAMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGNLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLYVDDMLIFGTNMELITDTKYFLSSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFKKFPAVLEGYCDANWVTDNDEVNSTSGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEAEWIKNLLGDVPLWGTSVPVSIQCDSQAAICTAKNSVYNGKSRHVRLRHAVVKQLLKEGTISLEFVRSEKNLADPLTKGLTRKMVLDSSVNMGLKPFGDP

Homology

[Close]

BLAST of IVF0012330 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 722.6 bits (1864), Expect = 8.1e-207
Identity = 448/1305 (34.33%), Postives = 702/1305 (53.79%), Query Frame = 0


Query: 80   KKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKK 139
            KK   +  E +A  ++     +  H+SD + +  + + +A+ IW+ LES Y       K 
Sbjct: 42   KKPDTMKAEDWADLDERAASAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKL 101

Query: 140  YVVGKWLQFQMNDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPPSWNDYRN 199
            Y+  +     M++    +  ++ +  L+  + + G+K+ E  +A +LL   P S+++   
Sbjct: 102  YLKKQLYALHMSEGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLAT 161

Query: 200  HLKHKKKDLRLPELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNRDRTKQEKGHK 259
             + H K  + L ++ S      A  L +K+  +  N   A + E    +  R+    G  
Sbjct: 162  TILHGKTTIELKDVTS------ALLLNEKMRKKPENQGQALITEGRGRSYQRSSNNYGRS 221

Query: 260  GKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQC-NQRKGR----PSQKPTPQANLAE 319
            G   + +       + K +   CY C + GH    C N RKG+      +     A + +
Sbjct: 222  GARGKSK------NRSKSRVRNCYNCNQPGHFKRDCPNPRKGKGETSGQKNDDNTAAMVQ 281

Query: 320  QDSEIIAAIVE----ANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSA 379
             +  ++  I E     +L   +++W++DT AS H    R+L   Y    D   V MGN++
Sbjct: 282  NNDNVVLFINEEEECMHLSGPESEWVVDTAASHHATPVRDLFCRYV-AGDFGTVKMGNTS 341

Query: 380  TAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKN 439
             + + G G + +K   G TL L +V +VP LR NL+SG  L+R G +      K  LTK 
Sbjct: 342  YSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMNLISGIALDRDGYESYFANQKWRLTKG 401

Query: 440  GDFVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLKDMRLIN 499
               + KG     L+  N        +++   I S +LWH R+GH++   ++ L    LI+
Sbjct: 402  SLVIAKGVARGTLYRTNAEICQGELNAAQDEI-SVDLWHKRMGHMSEKGLQILAKKSLIS 461

Query: 500  TSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFV 559
             ++      C  C+  K H+  F+    R   +L+L++SD+       S GG  Y+V+F+
Sbjct: 462  YAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFI 521

Query: 560  DDYSRYTKIYLIRTKNEAVSMFIKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESN 619
            DD SR   +Y+++TK++   +F KF A  E + G+++KRLRSD GGEY+ +  +E+C S+
Sbjct: 522  DDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSH 581

Query: 620  GIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSACFILNRIPHK 679
            GI HE T P +PQ NG+AER NRT+ E + +ML  + L  + WGEAV +AC+++NR P  
Sbjct: 582  GIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSV 641

Query: 680  RLD-KTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYR 739
             L  + P  +W     + S+LKV+GC A   +P  ++T +  K+  CIFIGY      YR
Sbjct: 642  PLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYR 701

Query: 740  FMCLNDKTINESRDAEFFEHVFP-------------LKQSLYAPSLSNRMHDPEIVSEIP 799
                  K +  SRD  F E                 +   +  PS SN     E  ++  
Sbjct: 702  LWDPVKKKVIRSRDVVFRESEVRTAADMSEKVKNGIIPNFVTIPSTSNNPTSAESTTD-E 761

Query: 800  VSETVDTPNLSCEL---------------------EP-RRSKRQRTEKSFGPDFLSTFIV 859
            VSE  + P    E                      +P RRS+R R E    P   ST  V
Sbjct: 762  VSEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQPLRRSERPRVESRRYP---STEYV 821

Query: 860  ERRDEIDCNFTNLFLIDEDPKTYQEALNSVDSRMWKEAIKSELDSLAMNHTWELVDLPMG 919
                        L   D +P++ +E L+  +     +A++ E++SL  N T++LV+LP G
Sbjct: 822  ------------LISDDREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKG 881

Query: 920  NKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALA 979
             +P++CKW+FK K   +  + RYKARLVV G+ QK+G+D+ + +SPV K+T+IR +++LA
Sbjct: 882  KRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLA 941

Query: 980  AIHNLLIHQMDVKTAFLNGNLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWY 1039
            A  +L + Q+DVKTAFL+G+LEEEIYM QPEGF+++G+++ VCKL KSLYGLKQAP+QWY
Sbjct: 942  ASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWY 1001

Query: 1040 EKFNNTLITNGFKINSSDTCVYSKMVGA-DCILICLYVDDMLIFGTNMELITDTKYFLSS 1099
             KF++ + +  +    SD CVY K     + I++ LYVDDMLI G +  LI   K  LS 
Sbjct: 1002 MKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSK 1061

Query: 1100 HFEMKDLGEADVILGVKIRKNKTS--LSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHL 1159
             F+MKDLG A  ILG+KI + +TS  L L Q  Y+E++L++F+  +  PV TP      L
Sbjct: 1062 SFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKL 1121

Query: 1160 KK--------NKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPNRYHWDA 1219
             K         KG+    P Y+  +GS+MY M  TRPDIA+AV  +SR+  NP + HW+A
Sbjct: 1122 SKKMCPTTVEEKGNMAKVP-YSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEA 1181

Query: 1220 LRHLLRYLKGTIDYCLHFKKFPAVLEGYCDANWVTDNDEVNSTSGYVFLLGGGAISWKST 1279
            ++ +LRYL+GT   CL F     +L+GY DA+   D D   S++GY+F   GGAISW+S 
Sbjct: 1182 VKWILRYLRGTTGDCLCFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSK 1241

Query: 1280 KQTCIARSTMESEFIALELAGQEAEWIKNLLGDVPLWGTSVPVSIQCDSQAAICTAKNSV 1329
             Q C+A ST E+E+IA    G+E  W+K  L ++ L      V   CDSQ+AI  +KNS+
Sbjct: 1242 LQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQKEYVV--YCDSQSAIDLSKNSM 1301

[Close]

BLAST of IVF0012330 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 522.3 bits (1344), Expect = 1.6e-146
Identity = 388/1390 (27.91%), Postives = 658/1390 (47.34%), Query Frame = 0


Query: 75   VTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAKDIWSTLESRYGGDD 134
            V D +  ++V D   + K  +  +  ++ ++SD   +      +A+ I   L++ Y    
Sbjct: 35   VVDGLMPNEVDD--SWKKAERCAKSTIIEYLSDSFLNFATSDITARQILENLDAVYERKS 94

Query: 135  AGRKKYVVGKWLQFQMNDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPPSW 194
               +  +  + L  +++ +  ++   H ++ L++ +L+ G K+ E+ + + LL   P  +
Sbjct: 95   LASQLALRKRLLSLKLSSEMSLLSHFHIFDELISELLAAGAKIEEMDKISHLLITLPSCY 154

Query: 195  NDYRNHLKHKKKDLRLPELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNRDRTKQ 254
            +     ++   ++      + +   ++  ++K+     + N  +  ++ +   N + T +
Sbjct: 155  DGIITAIETLSEENLTLAFVKNRLLDQEIKIKN-----DHNDTSKKVMNAIVHNNNNTYK 214

Query: 255  EKGHKGK-NSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQC------NQRKGRPSQKPT 314
                K +    K+ FK       K K+ C+ CG+EGH    C         K + ++K  
Sbjct: 215  NNLFKNRVTKPKKIFKGN----SKYKVKCHHCGREGHIKKDCFHYKRILNNKNKENEKQV 274

Query: 315  PQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMG 374
             Q   +   + ++  +   ++++N   ++LD+GAS H   +  L  D  +      + + 
Sbjct: 275  -QTATSHGIAFMVKEVNNTSVMDN-CGFVLDSGASDHLINDESLYTDSVEVVPPLKIAVA 334

Query: 375  NSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVL 434
                  +    + I++L +   ++L +VL+      NL+S   L  AG+ I  +   V +
Sbjct: 335  KQGEF-IYATKRGIVRLRNDHEITLEDVLFCKEAAGNLMSVKRLQEAGMSIEFDKSGVTI 394

Query: 435  TKNGDFVGKGY-LSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLK-- 494
            +KNG  V K   + N + V+N  + + NA        +  LWH R GH++   + ++K  
Sbjct: 395  SKNGLMVVKNSGMLNNVPVINFQAYSINAKHK----NNFRLWHERFGHISDGKLLEIKRK 454

Query: 495  ----DMRLINTSETHETGKCSICIESKFHKKPFKPVEYRT--TELLELIHSDLADFRTTA 554
                D  L+N  E      C  C+  K  + PFK ++ +T     L ++HSD+    T  
Sbjct: 455  NMFSDQSLLNNLEL-SCEICEPCLNGKQARLPFKQLKDKTHIKRPLFVVHSDVCGPITPV 514

Query: 555  SRGGKNYYVSFVDDYSRYTKIYLIRTKNEAVSMFIKFKAESENQLGKRIKRLRSDRGGEY 614
            +   KNY+V FVD ++ Y   YLI+ K++  SMF  F A+SE     ++  L  D G EY
Sbjct: 515  TLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREY 574

Query: 615  SDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVL 674
                +++FC   GI +  T P++PQ NG++ER  RT+ E    M+  + L  + WGEAVL
Sbjct: 575  LSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVL 634

Query: 675  SACFILNRIPHKRL---DKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFD 734
            +A +++NRIP + L    KTPYE+W    P L +L+V+G    V +   K+     K+F 
Sbjct: 635  TATYLINRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFGATVYVHIKN-KQGKFDDKSFK 694

Query: 735  CIFIGYAQN------SAAYRFMCLNDKTINESR----DAEFFEHVFPLKQSLYA------ 794
             IF+GY  N      +   +F+   D  ++E+      A  FE VF LK S  +      
Sbjct: 695  SIFVGYEPNGFKLWDAVNEKFIVARDVVVDETNMVNSRAVKFETVF-LKDSKESENKNFP 754

Query: 795  -----------PSLSNRMHDPEIVSEIPVSETVDTPNLSCEL------------------ 854
                       P+ S    + + + +   SE  + PN S ++                  
Sbjct: 755  NDSRKIIQTEFPNESKECDNIQFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFL 814

Query: 855  ---------------------------------EPRRSKRQRTEKSFGPDFLS----TFI 914
                                             E R S+     K  G D  +      I
Sbjct: 815  KDSKESNKYFLNESKKRKRDDHLNESKGSGNPNESRESETAEHLKEIGIDNPTKNDGIEI 874

Query: 915  VERR------------DEIDCNFTNLFL-----IDEDPKTYQEALNSVDSRMWKEAIKSE 974
            + RR            +E D +   + L      ++ P ++ E     D   W+EAI +E
Sbjct: 875  INRRSERLKTKPQISYNEEDNSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTE 934

Query: 975  LDSLAMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFD 1034
            L++  +N+TW +   P     +  +W+F  K    G   RYKARLV  G+TQK  +DY +
Sbjct: 935  LNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEE 994

Query: 1035 TYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGNLEEEIYMTQPEGFKISGQENKV 1094
            T++PV +I++ R +++L   +NL +HQMDVKTAFLNG L+EEIYM  P+G  IS   + V
Sbjct: 995  TFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQG--ISCNSDNV 1054

Query: 1095 CKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVG--ADCILICLYVDDM 1154
            CKL K++YGLKQA + W+E F   L    F  +S D C+Y    G   + I + LYVDD+
Sbjct: 1055 CKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDV 1114

Query: 1155 LIFGTNMELITDTKYFLSSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFD 1214
            +I   +M  + + K +L   F M DL E    +G++I   +  + L QS YV+KIL KF+
Sbjct: 1115 VIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFN 1174

Query: 1215 SFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTH 1274
              + + V TP  +  + +    D         +IG +MY+M  TRPD+  AV+ LSRY+ 
Sbjct: 1175 MENCNAVSTPLPSKINYELLNSDEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSS 1234

Query: 1275 NPNRYHWDALRHLLRYLKGTIDYCLHFKK---FPAVLEGYCDANWVTDNDEVNSTSGYVF 1334
              N   W  L+ +LRYLKGTID  L FKK   F   + GY D++W     +  ST+GY+F
Sbjct: 1235 KNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLF 1294

Query: 1335 -LLGGGAISWKSTKQTCIARSTMESEFIALELAGQEAEWIKNLLGDVPLWGTSVPVSIQC 1341
             +     I W + +Q  +A S+ E+E++AL  A +EA W+K LL  + +     P+ I  
Sbjct: 1295 KMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINI-KLENPIKIYE 1354

[Close]

BLAST of IVF0012330 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 514.2 bits (1323), Expect = 4.4e-144
Identity = 412/1505 (27.38%), Postives = 669/1505 (44.45%), Query Frame = 0


Query: 6    SNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPES 65
            +N +  ++S +  L  TNY  WS+++   F+  E+   L  D  T  PP T  T + P  
Sbjct: 13   TNILNVNMSNVTKLTSTNYLMWSRQVHALFDGYELAGFL--DGSTPMPPATIGTDAVPRV 72

Query: 66   STGPLTAVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAKDIWST 125
            +                   D  ++ + +K +   +L  +S  +        +A  IW T
Sbjct: 73   NP------------------DYTRWRRQDKLIYSAILGAISMSVQPAVSRATTAAQIWET 132

Query: 126  LESRYGGDDAGRKKYVVGKWLQFQMNDDKPVVEQIHEYENLVANVLSEGMKMCEILQANV 185
            L   Y     G         L+F           I  ++ L   +L + M   E  Q   
Sbjct: 133  LRKIYANPSYGHVTQ-----LRF-----------ITRFDQLA--LLGKPMDHDE--QVER 192

Query: 186  LLEKFPPSWNDYRNHLKHKKKDLRLPELISHMRTEEANRLKDKLASQNLNSVNANLVESS 245
            +LE  P  +    + +  K     L E+   +   E+  L   L S  +  + AN+V   
Sbjct: 193  VLENLPDDYKPVIDQIAAKDTPPSLTEIHERLINRESKLL--ALNSAEVVPITANVVTHR 252

Query: 246  FVNRDRTKQEKG------------------HKGKNSEKRQFKTTGGQIKKKKLVCYVCGK 305
              N +R +  +G                    G  S+ RQ K   G+       C +C  
Sbjct: 253  NTNTNRNQNNRGDNRNYNNNNNRSNSWQPSSSGSRSDNRQPKPYLGR-------CQICSV 312

Query: 306  EGHKSYQC-----------NQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWI 365
            +GH + +C            Q+   P     P+ANLA             N   N  +W+
Sbjct: 313  QGHSAKRCPQLHQFQSTTNQQQSTSPFTPWQPRANLA------------VNSPYNANNWL 372

Query: 366  LDTGASRHFCTNRELLHDYEDTADGECVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVL 425
            LD+GA+ H  ++   L  ++    G+ V + + +T  +   G   L  TS ++L L+ VL
Sbjct: 373  LDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLP-TSSRSLDLNKVL 432

Query: 426  YVPSLRRNLVSGSLL---NRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLF-----VLNT 485
            YVP++ +NL+S   L   NR  ++      +V     G  + +G   + L+         
Sbjct: 433  YVPNIHKNLISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQA 492

Query: 486  ISMNANASSSAYLIESANLWHGRLGHVNFASIRK-LKDMRLINTSETHETGKCSICIESK 545
            +SM A+  S A    + + WH RLGH + A +   + +  L   + +H+   CS C  +K
Sbjct: 493  VSMFASPCSKA----THSSWHSRLGHPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINK 552

Query: 546  FHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDDYSRYTKIYLIRTKNE 605
             HK PF      +++ LE I+SD+       S     YYV FVD ++RYT +Y ++ K++
Sbjct: 553  SHKVPFSNSTITSSKPLEYIYSDVWS-SPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQ 612

Query: 606  AVSMFIKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGI 665
                FI FK+  EN+   RI  L SD GGE+    L+++   +GI H  + P++P+ NG+
Sbjct: 613  VKDTFIIFKSLVENRFQTRIGTLYSDNGGEF--VVLRDYLSQHGISHFTSPPHTPEHNGL 672

Query: 666  AERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSACFILNRIPHKRLD-KTPYELWKGHAPN 725
            +ERK+R + EM   +L  + +    W  A   A +++NR+P   L  ++P++   G  PN
Sbjct: 673  SERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPN 732

Query: 726  LSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKTINESRDAEF 785
               LKV+GC     L    +  +  K+  C F+GY+   +AY  + +    +  SR  +F
Sbjct: 733  YEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQF 792

Query: 786  FEHVFPL----------------------------------------------------- 845
             E  FP                                                      
Sbjct: 793  DERCFPFSTTNFGVSTSQEQRSDSAPNWPSHTTLPTTPLVLPAPPCLGPHLDTSPRPPSS 852

Query: 846  ---------------KQSLYAPSLS---------------------NRMHDPEIVSEIPV 905
                             S+ +PS S                     +  + P + +  P 
Sbjct: 853  PSPLCTTQVSSSNLPSSSISSPSSSEPTAPSHNGPQPTAQPHQTQNSNSNSPILNNPNPN 912

Query: 906  SETVDTPNLSCEL------------------EPRRSKRQRTEKSFGPDFL-STFIVE--- 965
            S + ++PN +  L                  EP       T     P  L +  I++   
Sbjct: 913  SPSPNSPNQNSPLPQSPISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQVNA 972

Query: 966  -----------------RRDEIDCNFTNLFLIDEDPKTYQEALNSVDSRMWKEAIKSELD 1025
                             R+     ++      + +P+T   A+ ++    W++A+ SE++
Sbjct: 973  QAPVNTHSMATRAKDGIRKPNQKYSYATSLAANSEPRT---AIQAMKDDRWRQAMGSEIN 1032

Query: 1026 SLAMNHTWELVDLPMGNKPI-RCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDT 1085
            +   NHTW+LV  P  +  I  C+WIF +K   +G + RYKARLV  GY Q+ G+DY +T
Sbjct: 1033 AQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAET 1092

Query: 1086 YSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGNLEEEIYMTQPEGFKISGQENKVC 1145
            +SPV K T+IR ++ +A   +  I Q+DV  AFL G L +E+YM+QP GF    + + VC
Sbjct: 1093 FSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVC 1152

Query: 1146 KLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLYVDDMLIF 1205
            +LRK++YGLKQAP+ WY +    L+T GF  + SDT ++    G   I + +YVDD+LI 
Sbjct: 1153 RLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILIT 1212

Query: 1206 GTNMELITDTKYFLSSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSFD 1265
            G +  L+  T   LS  F +K+  +    LG++ ++    L L Q  Y   +L + +   
Sbjct: 1213 GNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLT 1272

Query: 1266 VSPVRTPFDASKHLKKNKGDSVSQP-EYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNP 1325
              PV TP   S  L  + G  +  P EY  I+GS+ YL  +TRPD++YAV+RLS+Y H P
Sbjct: 1273 AKPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLA-FTRPDLSYAVNRLSQYMHMP 1332

Query: 1326 NRYHWDALRHLLRYLKGTIDYCLHFKKFPAV-LEGYCDANWVTDNDEVNSTSGYVFLLGG 1341
               HW+AL+ +LRYL GT D+ +  KK   + L  Y DA+W  D D+  ST+GY+  LG 
Sbjct: 1333 TDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGH 1392

[Close]

BLAST of IVF0012330 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 513.5 bits (1321), Expect = 7.5e-144
Identity = 405/1484 (27.29%), Postives = 669/1484 (45.08%), Query Frame = 0


Query: 12   DLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLT 71
            ++S +  L  TNY  WS+++   F+  E+   L  D  T+ PP T  T + P  +     
Sbjct: 19   NMSNVTKLTSTNYLMWSRQVHALFDGYELAGFL--DGSTTMPPATIGTDAAPRVNP---- 78

Query: 72   AVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAKDIWSTLESRYG 131
                          D  ++ + +K +   +L  +S  +        +A  IW TL   Y 
Sbjct: 79   --------------DYTRWKRQDKLIYSAVLGAISMSVQPAVSRATTAAQIWETLRKIYA 138

Query: 132  GDDAG---RKKYVVGKWLQFQMNDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVLLE 191
                G   + +  + +W +     D  +   +  ++ L   +L + M   E  Q   +LE
Sbjct: 139  NPSYGHVTQLRTQLKQWTKGTKTIDDYMQGLVTRFDQLA--LLGKPMDHDE--QVERVLE 198

Query: 192  KFPPSWNDYRNHLKHKKKDLRLPELISHMRTEEANRLKDKLASQNLNSVNANLVE----- 251
              P  +    + +  K     L E+   +   E+  L   ++S  +  + AN V      
Sbjct: 199  NLPEEYKPVIDQIAAKDTPPTLTEIHERLLNHESKIL--AVSSATVIPITANAVSHRNTT 258

Query: 252  --SSFVNRDRTKQEKGHKGKNSEK------RQFKTTGGQIKKKKLVCYVCGKEGHKSYQC 311
              ++  N +R  +       N+ K        F     Q K     C +CG +GH + +C
Sbjct: 259  TTNNNNNGNRNNRYDNRNNNNNSKPWQQSSTNFHPNNNQSKPYLGKCQICGVQGHSAKRC 318

Query: 312  NQRKG-----RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRE 371
            +Q +         Q P+P      + +  + +   +N      +W+LD+GA+ H  ++  
Sbjct: 319  SQLQHFLSSVNSQQPPSPFTPWQPRANLALGSPYSSN------NWLLDSGATHHITSDFN 378

Query: 372  LLHDYEDTADGECVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSL 431
             L  ++    G+ V + + +T  +   G   L  T  + L+L N+LYVP++ +NL+S   
Sbjct: 379  NLSLHQPYTGGDDVMVADGSTIPISHTGSTSLS-TKSRPLNLHNILYVPNIHKNLISVYR 438

Query: 432  L---NRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLF-----VLNTISMNANASSSAYLI 491
            L   N   ++      +V     G  + +G   + L+         +S+ A+ SS A   
Sbjct: 439  LCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQPVSLFASPSSKA--- 498

Query: 492  ESANLWHGRLGHVNFASIRK-LKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTT 551
             + + WH RLGH   + +   + +  L   + +H+   CS C+ +K +K PF      +T
Sbjct: 499  -THSSWHARLGHPAPSILNSVISNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTINST 558

Query: 552  ELLELIHSDLADFRTTASRGGKNYYVSFVDDYSRYTKIYLIRTKNEAVSMFIKFKAESEN 611
              LE I+SD+       S     YYV FVD ++RYT +Y ++ K++    FI FK   EN
Sbjct: 559  RPLEYIYSDVWS-SPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLEN 618

Query: 612  QLGKRIKRLRSDRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNA 671
            +   RI    SD GGE+    L E+   +GI H  + P++P+ NG++ERK+R + E    
Sbjct: 619  RFQTRIGTFYSDNGGEF--VALWEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLT 678

Query: 672  MLLSSGLSDNMWGEAVLSACFILNRIPHKRLD-KTPYELWKGHAPNLSYLKVWGCLAKVP 731
            +L  + +    W  A   A +++NR+P   L  ++P++   G +PN   L+V+GC     
Sbjct: 679  LLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPW 738

Query: 732  LPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLY-- 791
            L    +  +  K+  C+F+GY+   +AY  + L    +  SR   F E+ FP    L   
Sbjct: 739  LRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFDENCFPFSNYLATL 798

Query: 792  ----------------------------APSLSNRMH----------------------D 851
                                        APS S+  H                      D
Sbjct: 799  SPVQEQRRESSCVWSPHTTLPTRTPVLPAPSCSDPHHAATPPSSPSAPFRNSQVSSSNLD 858

Query: 852  PEIVSEIP--------------------------------------------VSETVDTP 911
                S  P                                            +++++ TP
Sbjct: 859  SSFSSSFPSSPEPTAPRQNGPQPTTQPTQTQTQTHSSQNTSQNNPTNESPSQLAQSLSTP 918

Query: 912  --NLSCELEPRRSKRQRTEKSFGPDFL------STFIVERRDEIDCNFTNL------FLI 971
              + S    P  S    +     P  L         IV   ++   N  ++       +I
Sbjct: 919  AQSSSSSPSPTTSASSSSTSPTPPSILIHPPPPLAQIVNNNNQAPLNTHSMGTRAKAGII 978

Query: 972  DEDPK-----------TYQEALNSVDSRMWKEAIKSELDSLAMNHTWELVDLPMGNKPI- 1031
              +PK             + A+ ++    W+ A+ SE+++   NHTW+LV  P  +  I 
Sbjct: 979  KPNPKYSLAVSLAAESEPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIV 1038

Query: 1032 RCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHN 1091
             C+WIF +K   +G + RYKARLV  GY Q+ G+DY +T+SPV K T+IR ++ +A   +
Sbjct: 1039 GCRWIFTKKYNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRS 1098

Query: 1092 LLIHQMDVKTAFLNGNLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYEKFN 1151
              I Q+DV  AFL G L +++YM+QP GF    + N VCKLRK+LYGLKQAP+ WY +  
Sbjct: 1099 WPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELR 1158

Query: 1152 NTLITNGFKINSSDTCVYSKMVGADCILICLYVDDMLIFGTNMELITDTKYFLSSHFEMK 1211
            N L+T GF  + SDT ++    G   + + +YVDD+LI G +  L+ +T   LS  F +K
Sbjct: 1159 NYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVK 1218

Query: 1212 DLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDS 1271
            D  E    LG++ ++  T L L Q  Y+  +L + +     PV TP   S  L    G  
Sbjct: 1219 DHEELHYFLGIEAKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTK 1278

Query: 1272 VSQP-EYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDY 1331
            ++ P EY  I+GS+ YL  +TRPDI+YAV+RLS++ H P   H  AL+ +LRYL GT ++
Sbjct: 1279 LTDPTEYRGIVGSLQYLA-FTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNH 1338

Query: 1332 CLHFKKFPAV-LEGYCDANWVTDNDEVNSTSGYVFLLGGGAISWKSTKQTCIARSTMESE 1341
             +  KK   + L  Y DA+W  D D+  ST+GY+  LG   ISW S KQ  + RS+ E+E
Sbjct: 1339 GIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAE 1398

[Close]

BLAST of IVF0012330 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 168.7 bits (426), Expect = 4.5e-40
Identity = 104/299 (34.78%), Postives = 154/299 (51.51%), Query Frame = 0


Query: 944  MDVKTAFLNGNLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLIT 1003
            MDV TAFLN  ++E IY+ QP GF      + V +L   +YGLKQAP  W E  NNTL  
Sbjct: 1    MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 1004 NGFKINSSDTCVYSKMVGADCILICLYVDDMLIFGTNMELITDTKYFLSSHFEMKDLGEA 1063
             GF  +  +  +Y +      I I +YVDD+L+   + ++    K  L+  + MKDLG+ 
Sbjct: 61   IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120

Query: 1064 DVILGVKIRKNKT-SLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQ- 1123
            D  LG+ I ++    ++L    Y+ K   + +       +TP   SK L +     +   
Sbjct: 121  DKFLGLNIHQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLKDI 180

Query: 1124 PEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHF 1183
              Y  I+G +++  N  RPDI+Y VS LSR+   P   H ++ R +LRYL  T   CL +
Sbjct: 181  TPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTTRSMCLKY 240

Query: 1184 KK-FPAVLEGYCDANWVTDNDEVNSTSGYVFLLGGGAISWKSTK-QTCIARSTMESEFI 1239
            +      L  YCDA+    +D  +ST GYV LL G  ++W S K +  I   + E+E+I
Sbjct: 241  RSGSQLALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPSTEAEYI 299

[Close]

BLAST of IVF0012330 vs. ExPASy TrEMBL
Match: A0A5D3C5T2 (Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold70G00500 PE=4 SV=1)

HSP 1 Score: 2708.7 bits (7020), Expect = 0.0e+00
Identity = 1346/1346 (100.00%), Postives = 1346/1346 (100.00%), Query Frame = 0


Query: 1    MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTS 60
            MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTS
Sbjct: 1    MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTS 60

Query: 61   SDPESSTGPLTAVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAK 120
            SDPESSTGPLTAVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAK
Sbjct: 61   SDPESSTGPLTAVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAK 120

Query: 121  DIWSTLESRYGGDDAGRKKYVVGKWLQFQMNDDKPVVEQIHEYENLVANVLSEGMKMCEI 180
            DIWSTLESRYGGDDAGRKKYVVGKWLQFQMNDDKPVVEQIHEYENLVANVLSEGMKMCEI
Sbjct: 121  DIWSTLESRYGGDDAGRKKYVVGKWLQFQMNDDKPVVEQIHEYENLVANVLSEGMKMCEI 180

Query: 181  LQANVLLEKFPPSWNDYRNHLKHKKKDLRLPELISHMRTEEANRLKDKLASQNLNSVNAN 240
            LQANVLLEKFPPSWNDYRNHLKHKKKDLRLPELISHMRTEEANRLKDKLASQNLNSVNAN
Sbjct: 181  LQANVLLEKFPPSWNDYRNHLKHKKKDLRLPELISHMRTEEANRLKDKLASQNLNSVNAN 240

Query: 241  LVESSFVNRDRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG 300
            LVESSFVNRDRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG
Sbjct: 241  LVESSFVNRDRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG 300

Query: 301  RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTAD 360
            RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTAD
Sbjct: 301  RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTAD 360

Query: 361  GECVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVL 420
            GECVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVL
Sbjct: 361  GECVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVL 420

Query: 421  EGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASI 480
            EGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASI
Sbjct: 421  EGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASI 480

Query: 481  RKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASR 540
            RKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASR
Sbjct: 481  RKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASR 540

Query: 541  GGKNYYVSFVDDYSRYTKIYLIRTKNEAVSMFIKFKAESENQLGKRIKRLRSDRGGEYSD 600
            GGKNYYVSFVDDYSRYTKIYLIRTKNEAVSMFIKFKAESENQLGKRIKRLRSDRGGEYSD
Sbjct: 541  GGKNYYVSFVDDYSRYTKIYLIRTKNEAVSMFIKFKAESENQLGKRIKRLRSDRGGEYSD 600

Query: 601  KTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSA 660
            KTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSA
Sbjct: 601  KTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSA 660

Query: 661  CFILNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIG 720
            CFILNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIG
Sbjct: 661  CFILNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIG 720

Query: 721  YAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSET 780
            YAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSET
Sbjct: 721  YAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSET 780

Query: 781  VDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEA 840
            VDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEA
Sbjct: 781  VDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEA 840

Query: 841  LNSVDSRMWKEAIKSELDSLAMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKAR 900
            LNSVDSRMWKEAIKSELDSLAMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKAR
Sbjct: 841  LNSVDSRMWKEAIKSELDSLAMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKAR 900

Query: 901  LVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGNLEEEIY 960
            LVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGNLEEEIY
Sbjct: 901  LVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGNLEEEIY 960

Query: 961  MTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMV 1020
            MTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMV
Sbjct: 961  MTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMV 1020

Query: 1021 GADCILICLYVDDMLIFGTNMELITDTKYFLSSHFEMKDLGEADVILGVKIRKNKTSLSL 1080
            GADCILICLYVDDMLIFGTNMELITDTKYFLSSHFEMKDLGEADVILGVKIRKNKTSLSL
Sbjct: 1021 GADCILICLYVDDMLIFGTNMELITDTKYFLSSHFEMKDLGEADVILGVKIRKNKTSLSL 1080

Query: 1081 CQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRP 1140
            CQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRP
Sbjct: 1081 CQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRP 1140

Query: 1141 DIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFKKFPAVLEGYCDANWVTDN 1200
            DIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFKKFPAVLEGYCDANWVTDN
Sbjct: 1141 DIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFKKFPAVLEGYCDANWVTDN 1200

Query: 1201 DEVNSTSGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEAEWIKNLLGDVPLW 1260
            DEVNSTSGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEAEWIKNLLGDVPLW
Sbjct: 1201 DEVNSTSGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEAEWIKNLLGDVPLW 1260

Query: 1261 GTSVPVSIQCDSQAAICTAKNSVYNGKSRHVRLRHAVVKQLLKEGTISLEFVRSEKNLAD 1320
            GTSVPVSIQCDSQAAICTAKNSVYNGKSRHVRLRHAVVKQLLKEGTISLEFVRSEKNLAD
Sbjct: 1261 GTSVPVSIQCDSQAAICTAKNSVYNGKSRHVRLRHAVVKQLLKEGTISLEFVRSEKNLAD 1320

Query: 1321 PLTKGLTRKMVLDSSVNMGLKPFGDP 1347
            PLTKGLTRKMVLDSSVNMGLKPFGDP
Sbjct: 1321 PLTKGLTRKMVLDSSVNMGLKPFGDP 1346

[Close]

BLAST of IVF0012330 vs. ExPASy TrEMBL
Match: A0A5A7UTD6 (Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold486G00390 PE=4 SV=1)

HSP 1 Score: 2271.1 bits (5884), Expect = 0.0e+00
Identity = 1166/1346 (86.63%), Postives = 1166/1346 (86.63%), Query Frame = 0


Query: 1    MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTS 60
            MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTS
Sbjct: 1    MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTS 60

Query: 61   SDPESSTGPLTAVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAK 120
            SDPESSTGPLTAVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAK
Sbjct: 61   SDPESSTGPLTAVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAK 120

Query: 121  DIWSTLESRYGGDDAGRKKYVVGKWLQFQMNDDKPVVEQIHEYENLVANVLSEGMKMCEI 180
            DIWSTLESRYGGDDAGRKKYVVGKWLQFQMNDDKPVVEQIHEYENLVANVLSEGMKMCEI
Sbjct: 121  DIWSTLESRYGGDDAGRKKYVVGKWLQFQMNDDKPVVEQIHEYENLVANVLSEGMKMCEI 180

Query: 181  LQANVLLEKFPPSWNDYRNHLKHKKKDLRLPELISHMRTEEANRLKDKLASQNLNSVNAN 240
            LQANVLLEKFPPSWNDYRNHLKHKKKDLRLPELISHMRTEEANRLKDKLASQNLNSVNAN
Sbjct: 181  LQANVLLEKFPPSWNDYRNHLKHKKKDLRLPELISHMRTEEANRLKDKLASQNLNSVNAN 240

Query: 241  LVESSFVNRDRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG 300
            LVESSFVNRDRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG
Sbjct: 241  LVESSFVNRDRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG 300

Query: 301  RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTAD 360
            RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTAD
Sbjct: 301  RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTAD 360

Query: 361  GECVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVL 420
            GECVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVL
Sbjct: 361  GECVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVL 420

Query: 421  EGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASI 480
            EGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASI
Sbjct: 421  EGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASI 480

Query: 481  RKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASR 540
            RKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASR
Sbjct: 481  RKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASR 540

Query: 541  GGKNYYVSFVDDYSRYTKIYLIRTKNEAVSMFIKFKAESENQLGKRIKRLRSDRGGEYSD 600
            GGKNYYVSFVDDYSRYTKIYLIRTKNEAVSMFIKFKAESENQLGKRIKRLRSDRGGEYSD
Sbjct: 541  GGKNYYVSFVDDYSRYTKIYLIRTKNEAVSMFIKFKAESENQLGKRIKRLRSDRGGEYSD 600

Query: 601  KTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSA 660
            KTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSA
Sbjct: 601  KTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSA 660

Query: 661  CFILNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIG 720
            CFILNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIG
Sbjct: 661  CFILNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIG 720

Query: 721  YAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSET 780
            YAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSET
Sbjct: 721  YAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSET 780

Query: 781  VDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEA 840
            VDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEA
Sbjct: 781  VDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEA 840

Query: 841  LNSVDSRMWKEAIKSELDSLAMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKAR 900
            LNSVDSRMWKEAIKSELDSLAMNHTWELVDLPMGNKPIR                     
Sbjct: 841  LNSVDSRMWKEAIKSELDSLAMNHTWELVDLPMGNKPIRY-------------------- 900

Query: 901  LVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGNLEEEIY 960
                                                                        
Sbjct: 901  ------------------------------------------------------------ 960

Query: 961  MTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMV 1020
                                                                        
Sbjct: 961  ------------------------------------------------------------ 1020

Query: 1021 GADCILICLYVDDMLIFGTNMELITDTKYFLSSHFEMKDLGEADVILGVKIRKNKTSLSL 1080
                                                   LGEADVILGVKIRKNKTSLSL
Sbjct: 1021 ---------------------------------------LGEADVILGVKIRKNKTSLSL 1080

Query: 1081 CQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRP 1140
            CQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRP
Sbjct: 1081 CQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRP 1140

Query: 1141 DIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFKKFPAVLEGYCDANWVTDN 1200
            DIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFKKFPAVLEGYCDANWVTDN
Sbjct: 1141 DIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFKKFPAVLEGYCDANWVTDN 1167

Query: 1201 DEVNSTSGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEAEWIKNLLGDVPLW 1260
            DEVNSTSGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEAEWIKNLLGDVPLW
Sbjct: 1201 DEVNSTSGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEAEWIKNLLGDVPLW 1167

Query: 1261 GTSVPVSIQCDSQAAICTAKNSVYNGKSRHVRLRHAVVKQLLKEGTISLEFVRSEKNLAD 1320
            GTSVPVSIQCDSQAAICTAKNSVYNGKSRHVRLRHAVVKQLLKEGTISLEFVRSEKNLAD
Sbjct: 1261 GTSVPVSIQCDSQAAICTAKNSVYNGKSRHVRLRHAVVKQLLKEGTISLEFVRSEKNLAD 1167

Query: 1321 PLTKGLTRKMVLDSSVNMGLKPFGDP 1347
            PLTKGLTRKMVLDSSVNMGLKPFGDP
Sbjct: 1321 PLTKGLTRKMVLDSSVNMGLKPFGDP 1167

[Close]

BLAST of IVF0012330 vs. ExPASy TrEMBL
Match: A0A5D3BWR7 (Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1734G00230 PE=4 SV=1)

HSP 1 Score: 2265.3 bits (5869), Expect = 0.0e+00
Identity = 1163/1346 (86.40%), Postives = 1164/1346 (86.48%), Query Frame = 0


Query: 1    MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTS 60
            MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPT DPPTTTSTS
Sbjct: 1    MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTPDPPTTTSTS 60

Query: 61   SDPESSTGPLTAVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAK 120
            SDPESSTGPLTAVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAK
Sbjct: 61   SDPESSTGPLTAVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAK 120

Query: 121  DIWSTLESRYGGDDAGRKKYVVGKWLQFQMNDDKPVVEQIHEYENLVANVLSEGMKMCEI 180
            DIWSTL+SRYGGDDAGRKKYVVGKWLQFQM DDKPVVEQIHEYENLVANVLSEGMKMCEI
Sbjct: 121  DIWSTLKSRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEI 180

Query: 181  LQANVLLEKFPPSWNDYRNHLKHKKKDLRLPELISHMRTEEANRLKDKLASQNLNSVNAN 240
            LQANVLLEKFPPSWNDYRNHLKHKKKDLRLPELISHMRTEEANRLKDKLASQNLNSVNAN
Sbjct: 181  LQANVLLEKFPPSWNDYRNHLKHKKKDLRLPELISHMRTEEANRLKDKLASQNLNSVNAN 240

Query: 241  LVESSFVNRDRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG 300
            LVESSFVNRDRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG
Sbjct: 241  LVESSFVNRDRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG 300

Query: 301  RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTAD 360
            RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTAD
Sbjct: 301  RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTAD 360

Query: 361  GECVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVL 420
            GECVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVL
Sbjct: 361  GECVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVL 420

Query: 421  EGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASI 480
            EGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASI
Sbjct: 421  EGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASI 480

Query: 481  RKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASR 540
            RKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASR
Sbjct: 481  RKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASR 540

Query: 541  GGKNYYVSFVDDYSRYTKIYLIRTKNEAVSMFIKFKAESENQLGKRIKRLRSDRGGEYSD 600
            GGKNYYVSFVDDYSRYTKIYLIRTKNEAVSMFIKFKAESENQLGKRIKRLRSDRGGEYSD
Sbjct: 541  GGKNYYVSFVDDYSRYTKIYLIRTKNEAVSMFIKFKAESENQLGKRIKRLRSDRGGEYSD 600

Query: 601  KTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSA 660
            KTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSA
Sbjct: 601  KTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSA 660

Query: 661  CFILNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIG 720
            CFILNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIG
Sbjct: 661  CFILNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIG 720

Query: 721  YAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSET 780
            YAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSET
Sbjct: 721  YAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSET 780

Query: 781  VDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEA 840
            VDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEA
Sbjct: 781  VDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEA 840

Query: 841  LNSVDSRMWKEAIKSELDSLAMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKAR 900
            LNSVDSRMWKEAIKSELDSLAMNHTWELVDLPMGNKPIR                     
Sbjct: 841  LNSVDSRMWKEAIKSELDSLAMNHTWELVDLPMGNKPIRY-------------------- 900

Query: 901  LVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGNLEEEIY 960
                                                                        
Sbjct: 901  ------------------------------------------------------------ 960

Query: 961  MTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMV 1020
                                                                        
Sbjct: 961  ------------------------------------------------------------ 1020

Query: 1021 GADCILICLYVDDMLIFGTNMELITDTKYFLSSHFEMKDLGEADVILGVKIRKNKTSLSL 1080
                                                   LGEADVILGVKIRKNKTSLSL
Sbjct: 1021 ---------------------------------------LGEADVILGVKIRKNKTSLSL 1080

Query: 1081 CQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRP 1140
            CQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRP
Sbjct: 1081 CQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRP 1140

Query: 1141 DIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFKKFPAVLEGYCDANWVTDN 1200
            DIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFKKFPAVLEGYCDANWVTDN
Sbjct: 1141 DIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFKKFPAVLEGYCDANWVTDN 1167

Query: 1201 DEVNSTSGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEAEWIKNLLGDVPLW 1260
            DEVNSTSGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEAEWIKNLLGDVPLW
Sbjct: 1201 DEVNSTSGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEAEWIKNLLGDVPLW 1167

Query: 1261 GTSVPVSIQCDSQAAICTAKNSVYNGKSRHVRLRHAVVKQLLKEGTISLEFVRSEKNLAD 1320
            GTSVPVSIQCDSQAAICTAKNSVYNGKSRHVRLRHAVVKQLLKEGTISLEFVRSEKNLAD
Sbjct: 1261 GTSVPVSIQCDSQAAICTAKNSVYNGKSRHVRLRHAVVKQLLKEGTISLEFVRSEKNLAD 1167

Query: 1321 PLTKGLTRKMVLDSSVNMGLKPFGDP 1347
            PLTKGLTRKMVLDSSVNMGLKPFGDP
Sbjct: 1321 PLTKGLTRKMVLDSSVNMGLKPFGDP 1167

[Close]

BLAST of IVF0012330 vs. ExPASy TrEMBL
Match: A0A5D3DHN5 (Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G00440 PE=4 SV=1)

HSP 1 Score: 2265.0 bits (5868), Expect = 0.0e+00
Identity = 1163/1346 (86.40%), Postives = 1164/1346 (86.48%), Query Frame = 0


Query: 1    MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTS 60
            M IKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTS
Sbjct: 1    MLIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTS 60

Query: 61   SDPESSTGPLTAVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAK 120
            SDPESSTGPLTAVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAK
Sbjct: 61   SDPESSTGPLTAVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAK 120

Query: 121  DIWSTLESRYGGDDAGRKKYVVGKWLQFQMNDDKPVVEQIHEYENLVANVLSEGMKMCEI 180
            DIWSTLESRYGGDDAGRKKYVVGKWLQFQMNDDKPVVEQIHEYENLVANVLSEGMKMCEI
Sbjct: 121  DIWSTLESRYGGDDAGRKKYVVGKWLQFQMNDDKPVVEQIHEYENLVANVLSEGMKMCEI 180

Query: 181  LQANVLLEKFPPSWNDYRNHLKHKKKDLRLPELISHMRTEEANRLKDKLASQNLNSVNAN 240
            LQANVLLEKFPPSWNDYRNHLKHKKKDLRLPELISHMRTEEANRLKDKLASQNLNSVNAN
Sbjct: 181  LQANVLLEKFPPSWNDYRNHLKHKKKDLRLPELISHMRTEEANRLKDKLASQNLNSVNAN 240

Query: 241  LVESSFVNRDRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG 300
            LVESSFVNRDRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG
Sbjct: 241  LVESSFVNRDRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG 300

Query: 301  RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTAD 360
            RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTAD
Sbjct: 301  RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTAD 360

Query: 361  GECVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVL 420
            GECVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVL
Sbjct: 361  GECVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVL 420

Query: 421  EGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASI 480
            EGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASI
Sbjct: 421  EGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASI 480

Query: 481  RKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASR 540
            RKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASR
Sbjct: 481  RKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASR 540

Query: 541  GGKNYYVSFVDDYSRYTKIYLIRTKNEAVSMFIKFKAESENQLGKRIKRLRSDRGGEYSD 600
            GGKNYYVSFVDDYSRYTKIYLIRTKNEAVSMFIKFKAESENQLGKRIKRLRSDRGGEYSD
Sbjct: 541  GGKNYYVSFVDDYSRYTKIYLIRTKNEAVSMFIKFKAESENQLGKRIKRLRSDRGGEYSD 600

Query: 601  KTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSA 660
            KTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSA
Sbjct: 601  KTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSA 660

Query: 661  CFILNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIG 720
            CFILNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIG
Sbjct: 661  CFILNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIG 720

Query: 721  YAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSET 780
            YAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSET
Sbjct: 721  YAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSET 780

Query: 781  VDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEA 840
            VDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEA
Sbjct: 781  VDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEA 840

Query: 841  LNSVDSRMWKEAIKSELDSLAMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKAR 900
            LNSVDSRMWKEAIKSELDSLAMNHTWELVDLPMGNKPIR                     
Sbjct: 841  LNSVDSRMWKEAIKSELDSLAMNHTWELVDLPMGNKPIRY-------------------- 900

Query: 901  LVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGNLEEEIY 960
                                                                        
Sbjct: 901  ------------------------------------------------------------ 960

Query: 961  MTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMV 1020
                                                                        
Sbjct: 961  ------------------------------------------------------------ 1020

Query: 1021 GADCILICLYVDDMLIFGTNMELITDTKYFLSSHFEMKDLGEADVILGVKIRKNKTSLSL 1080
                                                   LGEADVILGVKIRKNKTSLSL
Sbjct: 1021 ---------------------------------------LGEADVILGVKIRKNKTSLSL 1080

Query: 1081 CQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRP 1140
            CQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRP
Sbjct: 1081 CQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRP 1140

Query: 1141 DIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFKKFPAVLEGYCDANWVTDN 1200
            DIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFKKFPAVLEGYCDANWVTDN
Sbjct: 1141 DIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFKKFPAVLEGYCDANWVTDN 1167

Query: 1201 DEVNSTSGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEAEWIKNLLGDVPLW 1260
            DEVNSTSGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEAEWIKNLLGDVPLW
Sbjct: 1201 DEVNSTSGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEAEWIKNLLGDVPLW 1167

Query: 1261 GTSVPVSIQCDSQAAICTAKNSVYNGKSRHVRLRHAVVKQLLKEGTISLEFVRSEKNLAD 1320
            GTSVPVSIQC SQAAICTAKNSVYNGKSRH+RLRHAVVKQLLKEGTISLEFVRSEKNLAD
Sbjct: 1261 GTSVPVSIQCVSQAAICTAKNSVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRSEKNLAD 1167

Query: 1321 PLTKGLTRKMVLDSSVNMGLKPFGDP 1347
            PLTKGLTRKMVLDSSVNMGLKPFGDP
Sbjct: 1321 PLTKGLTRKMVLDSSVNMGLKPFGDP 1167

[Close]

BLAST of IVF0012330 vs. ExPASy TrEMBL
Match: A0A5D3C7Z8 (Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G001160 PE=4 SV=1)

HSP 1 Score: 2262.3 bits (5861), Expect = 0.0e+00
Identity = 1161/1346 (86.26%), Postives = 1162/1346 (86.33%), Query Frame = 0


Query: 1    MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTS 60
            MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPT DPPTTTSTS
Sbjct: 1    MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTFDPPTTTSTS 60

Query: 61   SDPESSTGPLTAVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAK 120
            SDPESSTGPLT VAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAK
Sbjct: 61   SDPESSTGPLTTVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAK 120

Query: 121  DIWSTLESRYGGDDAGRKKYVVGKWLQFQMNDDKPVVEQIHEYENLVANVLSEGMKMCEI 180
            DIWSTLESRYGGDDAGRKKYVVGKWLQFQMNDDKPVVEQIHEYENLVANVLSEGMKMCEI
Sbjct: 121  DIWSTLESRYGGDDAGRKKYVVGKWLQFQMNDDKPVVEQIHEYENLVANVLSEGMKMCEI 180

Query: 181  LQANVLLEKFPPSWNDYRNHLKHKKKDLRLPELISHMRTEEANRLKDKLASQNLNSVNAN 240
            LQANVLLEKFPPSWNDYRNHLKHKKKDLRLPELISHMRTEEANRLKDKLASQNLNSVNAN
Sbjct: 181  LQANVLLEKFPPSWNDYRNHLKHKKKDLRLPELISHMRTEEANRLKDKLASQNLNSVNAN 240

Query: 241  LVESSFVNRDRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG 300
            LVESSFVNRDRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG
Sbjct: 241  LVESSFVNRDRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG 300

Query: 301  RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTAD 360
            RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTAD
Sbjct: 301  RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTAD 360

Query: 361  GECVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVL 420
            GECVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVL
Sbjct: 361  GECVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVL 420

Query: 421  EGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASI 480
            EGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASI
Sbjct: 421  EGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASI 480

Query: 481  RKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASR 540
            RKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASR
Sbjct: 481  RKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASR 540

Query: 541  GGKNYYVSFVDDYSRYTKIYLIRTKNEAVSMFIKFKAESENQLGKRIKRLRSDRGGEYSD 600
            GGKNYYVSFVDDYSRYTKIYLIRTKNEAVSMFIKFKAESENQLGKRIKRLRSDRGGEYSD
Sbjct: 541  GGKNYYVSFVDDYSRYTKIYLIRTKNEAVSMFIKFKAESENQLGKRIKRLRSDRGGEYSD 600

Query: 601  KTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSA 660
            KTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSA
Sbjct: 601  KTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSA 660

Query: 661  CFILNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIG 720
            CFILNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIG
Sbjct: 661  CFILNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIG 720

Query: 721  YAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSET 780
            YAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSET
Sbjct: 721  YAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSET 780

Query: 781  VDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEA 840
            VDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEA
Sbjct: 781  VDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEA 840

Query: 841  LNSVDSRMWKEAIKSELDSLAMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKAR 900
            LNSVDSRMWKEAIKSELDSLAMNHTWELVDLPMGNKPIR                     
Sbjct: 841  LNSVDSRMWKEAIKSELDSLAMNHTWELVDLPMGNKPIRY-------------------- 900

Query: 901  LVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGNLEEEIY 960
                                                                        
Sbjct: 901  ------------------------------------------------------------ 960

Query: 961  MTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMV 1020
                                                                        
Sbjct: 961  ------------------------------------------------------------ 1020

Query: 1021 GADCILICLYVDDMLIFGTNMELITDTKYFLSSHFEMKDLGEADVILGVKIRKNKTSLSL 1080
                                                   LGEADVILGVKIRKNKTSLSL
Sbjct: 1021 ---------------------------------------LGEADVILGVKIRKNKTSLSL 1080

Query: 1081 CQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRP 1140
            CQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRP
Sbjct: 1081 CQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRP 1140

Query: 1141 DIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFKKFPAVLEGYCDANWVTDN 1200
            DIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHF KFPAVLEGYCDANWVTDN
Sbjct: 1141 DIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDN 1167

Query: 1201 DEVNSTSGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEAEWIKNLLGDVPLW 1260
            DEVNSTSGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEAEWIKNLLGDVPLW
Sbjct: 1201 DEVNSTSGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEAEWIKNLLGDVPLW 1167

Query: 1261 GTSVPVSIQCDSQAAICTAKNSVYNGKSRHVRLRHAVVKQLLKEGTISLEFVRSEKNLAD 1320
            GTSVPVSIQCDSQAAICTAKNSVYNGKSRH+RLRHAVVKQLLKEGTISLEFVRSEKNLAD
Sbjct: 1261 GTSVPVSIQCDSQAAICTAKNSVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRSEKNLAD 1167

Query: 1321 PLTKGLTRKMVLDSSVNMGLKPFGDP 1347
            PLTKGLTRKMVLDSSVNM LKPFGDP
Sbjct: 1321 PLTKGLTRKMVLDSSVNMDLKPFGDP 1167

[Close]

BLAST of IVF0012330 vs. NCBI nr
Match: TYK06518.1 (ty1-copia retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 2701 bits (7000), Expect = 0.0
Identity = 1346/1346 (100.00%), Postives = 1346/1346 (100.00%), Query Frame = 0


Query: 1    MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTS 60
            MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTS
Sbjct: 1    MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTS 60

Query: 61   SDPESSTGPLTAVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAK 120
            SDPESSTGPLTAVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAK
Sbjct: 61   SDPESSTGPLTAVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAK 120

Query: 121  DIWSTLESRYGGDDAGRKKYVVGKWLQFQMNDDKPVVEQIHEYENLVANVLSEGMKMCEI 180
            DIWSTLESRYGGDDAGRKKYVVGKWLQFQMNDDKPVVEQIHEYENLVANVLSEGMKMCEI
Sbjct: 121  DIWSTLESRYGGDDAGRKKYVVGKWLQFQMNDDKPVVEQIHEYENLVANVLSEGMKMCEI 180

Query: 181  LQANVLLEKFPPSWNDYRNHLKHKKKDLRLPELISHMRTEEANRLKDKLASQNLNSVNAN 240
            LQANVLLEKFPPSWNDYRNHLKHKKKDLRLPELISHMRTEEANRLKDKLASQNLNSVNAN
Sbjct: 181  LQANVLLEKFPPSWNDYRNHLKHKKKDLRLPELISHMRTEEANRLKDKLASQNLNSVNAN 240

Query: 241  LVESSFVNRDRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG 300
            LVESSFVNRDRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG
Sbjct: 241  LVESSFVNRDRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG 300

Query: 301  RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTAD 360
            RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTAD
Sbjct: 301  RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTAD 360

Query: 361  GECVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVL 420
            GECVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVL
Sbjct: 361  GECVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVL 420

Query: 421  EGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASI 480
            EGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASI
Sbjct: 421  EGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASI 480

Query: 481  RKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASR 540
            RKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASR
Sbjct: 481  RKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASR 540

Query: 541  GGKNYYVSFVDDYSRYTKIYLIRTKNEAVSMFIKFKAESENQLGKRIKRLRSDRGGEYSD 600
            GGKNYYVSFVDDYSRYTKIYLIRTKNEAVSMFIKFKAESENQLGKRIKRLRSDRGGEYSD
Sbjct: 541  GGKNYYVSFVDDYSRYTKIYLIRTKNEAVSMFIKFKAESENQLGKRIKRLRSDRGGEYSD 600

Query: 601  KTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSA 660
            KTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSA
Sbjct: 601  KTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSA 660

Query: 661  CFILNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIG 720
            CFILNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIG
Sbjct: 661  CFILNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIG 720

Query: 721  YAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSET 780
            YAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSET
Sbjct: 721  YAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSET 780

Query: 781  VDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEA 840
            VDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEA
Sbjct: 781  VDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEA 840

Query: 841  LNSVDSRMWKEAIKSELDSLAMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKAR 900
            LNSVDSRMWKEAIKSELDSLAMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKAR
Sbjct: 841  LNSVDSRMWKEAIKSELDSLAMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKAR 900

Query: 901  LVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGNLEEEIY 960
            LVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGNLEEEIY
Sbjct: 901  LVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGNLEEEIY 960

Query: 961  MTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMV 1020
            MTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMV
Sbjct: 961  MTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMV 1020

Query: 1021 GADCILICLYVDDMLIFGTNMELITDTKYFLSSHFEMKDLGEADVILGVKIRKNKTSLSL 1080
            GADCILICLYVDDMLIFGTNMELITDTKYFLSSHFEMKDLGEADVILGVKIRKNKTSLSL
Sbjct: 1021 GADCILICLYVDDMLIFGTNMELITDTKYFLSSHFEMKDLGEADVILGVKIRKNKTSLSL 1080

Query: 1081 CQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRP 1140
            CQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRP
Sbjct: 1081 CQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRP 1140

Query: 1141 DIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFKKFPAVLEGYCDANWVTDN 1200
            DIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFKKFPAVLEGYCDANWVTDN
Sbjct: 1141 DIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFKKFPAVLEGYCDANWVTDN 1200

Query: 1201 DEVNSTSGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEAEWIKNLLGDVPLW 1260
            DEVNSTSGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEAEWIKNLLGDVPLW
Sbjct: 1201 DEVNSTSGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEAEWIKNLLGDVPLW 1260

Query: 1261 GTSVPVSIQCDSQAAICTAKNSVYNGKSRHVRLRHAVVKQLLKEGTISLEFVRSEKNLAD 1320
            GTSVPVSIQCDSQAAICTAKNSVYNGKSRHVRLRHAVVKQLLKEGTISLEFVRSEKNLAD
Sbjct: 1261 GTSVPVSIQCDSQAAICTAKNSVYNGKSRHVRLRHAVVKQLLKEGTISLEFVRSEKNLAD 1320

Query: 1321 PLTKGLTRKMVLDSSVNMGLKPFGDP 1346
            PLTKGLTRKMVLDSSVNMGLKPFGDP
Sbjct: 1321 PLTKGLTRKMVLDSSVNMGLKPFGDP 1346

[Close]

BLAST of IVF0012330 vs. NCBI nr
Match: KAA0056761.1 (ty1-copia retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 2266 bits (5871), Expect = 0.0
Identity = 1166/1346 (86.63%), Postives = 1166/1346 (86.63%), Query Frame = 0


Query: 1    MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTS 60
            MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTS
Sbjct: 1    MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTS 60

Query: 61   SDPESSTGPLTAVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAK 120
            SDPESSTGPLTAVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAK
Sbjct: 61   SDPESSTGPLTAVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAK 120

Query: 121  DIWSTLESRYGGDDAGRKKYVVGKWLQFQMNDDKPVVEQIHEYENLVANVLSEGMKMCEI 180
            DIWSTLESRYGGDDAGRKKYVVGKWLQFQMNDDKPVVEQIHEYENLVANVLSEGMKMCEI
Sbjct: 121  DIWSTLESRYGGDDAGRKKYVVGKWLQFQMNDDKPVVEQIHEYENLVANVLSEGMKMCEI 180

Query: 181  LQANVLLEKFPPSWNDYRNHLKHKKKDLRLPELISHMRTEEANRLKDKLASQNLNSVNAN 240
            LQANVLLEKFPPSWNDYRNHLKHKKKDLRLPELISHMRTEEANRLKDKLASQNLNSVNAN
Sbjct: 181  LQANVLLEKFPPSWNDYRNHLKHKKKDLRLPELISHMRTEEANRLKDKLASQNLNSVNAN 240

Query: 241  LVESSFVNRDRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG 300
            LVESSFVNRDRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG
Sbjct: 241  LVESSFVNRDRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG 300

Query: 301  RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTAD 360
            RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTAD
Sbjct: 301  RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTAD 360

Query: 361  GECVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVL 420
            GECVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVL
Sbjct: 361  GECVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVL 420

Query: 421  EGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASI 480
            EGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASI
Sbjct: 421  EGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASI 480

Query: 481  RKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASR 540
            RKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASR
Sbjct: 481  RKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASR 540

Query: 541  GGKNYYVSFVDDYSRYTKIYLIRTKNEAVSMFIKFKAESENQLGKRIKRLRSDRGGEYSD 600
            GGKNYYVSFVDDYSRYTKIYLIRTKNEAVSMFIKFKAESENQLGKRIKRLRSDRGGEYSD
Sbjct: 541  GGKNYYVSFVDDYSRYTKIYLIRTKNEAVSMFIKFKAESENQLGKRIKRLRSDRGGEYSD 600

Query: 601  KTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSA 660
            KTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSA
Sbjct: 601  KTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSA 660

Query: 661  CFILNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIG 720
            CFILNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIG
Sbjct: 661  CFILNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIG 720

Query: 721  YAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSET 780
            YAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSET
Sbjct: 721  YAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSET 780

Query: 781  VDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEA 840
            VDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEA
Sbjct: 781  VDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEA 840

Query: 841  LNSVDSRMWKEAIKSELDSLAMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKAR 900
            LNSVDSRMWKEAIKSELDSLAMNHTWELVDLPMGNKPIR                     
Sbjct: 841  LNSVDSRMWKEAIKSELDSLAMNHTWELVDLPMGNKPIRY-------------------- 900

Query: 901  LVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGNLEEEIY 960
                                                                        
Sbjct: 901  ------------------------------------------------------------ 960

Query: 961  MTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMV 1020
                                                                        
Sbjct: 961  ------------------------------------------------------------ 1020

Query: 1021 GADCILICLYVDDMLIFGTNMELITDTKYFLSSHFEMKDLGEADVILGVKIRKNKTSLSL 1080
                                                   LGEADVILGVKIRKNKTSLSL
Sbjct: 1021 ---------------------------------------LGEADVILGVKIRKNKTSLSL 1080

Query: 1081 CQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRP 1140
            CQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRP
Sbjct: 1081 CQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRP 1140

Query: 1141 DIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFKKFPAVLEGYCDANWVTDN 1200
            DIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFKKFPAVLEGYCDANWVTDN
Sbjct: 1141 DIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFKKFPAVLEGYCDANWVTDN 1167

Query: 1201 DEVNSTSGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEAEWIKNLLGDVPLW 1260
            DEVNSTSGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEAEWIKNLLGDVPLW
Sbjct: 1201 DEVNSTSGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEAEWIKNLLGDVPLW 1167

Query: 1261 GTSVPVSIQCDSQAAICTAKNSVYNGKSRHVRLRHAVVKQLLKEGTISLEFVRSEKNLAD 1320
            GTSVPVSIQCDSQAAICTAKNSVYNGKSRHVRLRHAVVKQLLKEGTISLEFVRSEKNLAD
Sbjct: 1261 GTSVPVSIQCDSQAAICTAKNSVYNGKSRHVRLRHAVVKQLLKEGTISLEFVRSEKNLAD 1167

Query: 1321 PLTKGLTRKMVLDSSVNMGLKPFGDP 1346
            PLTKGLTRKMVLDSSVNMGLKPFGDP
Sbjct: 1321 PLTKGLTRKMVLDSSVNMGLKPFGDP 1167

[Close]

BLAST of IVF0012330 vs. NCBI nr
Match: TYK02676.1 (ty1-copia retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 2260 bits (5856), Expect = 0.0
Identity = 1163/1346 (86.40%), Postives = 1164/1346 (86.48%), Query Frame = 0


Query: 1    MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTS 60
            MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPT DPPTTTSTS
Sbjct: 1    MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTPDPPTTTSTS 60

Query: 61   SDPESSTGPLTAVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAK 120
            SDPESSTGPLTAVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAK
Sbjct: 61   SDPESSTGPLTAVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAK 120

Query: 121  DIWSTLESRYGGDDAGRKKYVVGKWLQFQMNDDKPVVEQIHEYENLVANVLSEGMKMCEI 180
            DIWSTL+SRYGGDDAGRKKYVVGKWLQFQM DDKPVVEQIHEYENLVANVLSEGMKMCEI
Sbjct: 121  DIWSTLKSRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEI 180

Query: 181  LQANVLLEKFPPSWNDYRNHLKHKKKDLRLPELISHMRTEEANRLKDKLASQNLNSVNAN 240
            LQANVLLEKFPPSWNDYRNHLKHKKKDLRLPELISHMRTEEANRLKDKLASQNLNSVNAN
Sbjct: 181  LQANVLLEKFPPSWNDYRNHLKHKKKDLRLPELISHMRTEEANRLKDKLASQNLNSVNAN 240

Query: 241  LVESSFVNRDRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG 300
            LVESSFVNRDRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG
Sbjct: 241  LVESSFVNRDRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG 300

Query: 301  RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTAD 360
            RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTAD
Sbjct: 301  RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTAD 360

Query: 361  GECVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVL 420
            GECVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVL
Sbjct: 361  GECVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVL 420

Query: 421  EGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASI 480
            EGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASI
Sbjct: 421  EGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASI 480

Query: 481  RKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASR 540
            RKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASR
Sbjct: 481  RKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASR 540

Query: 541  GGKNYYVSFVDDYSRYTKIYLIRTKNEAVSMFIKFKAESENQLGKRIKRLRSDRGGEYSD 600
            GGKNYYVSFVDDYSRYTKIYLIRTKNEAVSMFIKFKAESENQLGKRIKRLRSDRGGEYSD
Sbjct: 541  GGKNYYVSFVDDYSRYTKIYLIRTKNEAVSMFIKFKAESENQLGKRIKRLRSDRGGEYSD 600

Query: 601  KTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSA 660
            KTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSA
Sbjct: 601  KTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSA 660

Query: 661  CFILNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIG 720
            CFILNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIG
Sbjct: 661  CFILNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIG 720

Query: 721  YAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSET 780
            YAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSET
Sbjct: 721  YAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSET 780

Query: 781  VDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEA 840
            VDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEA
Sbjct: 781  VDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEA 840

Query: 841  LNSVDSRMWKEAIKSELDSLAMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKAR 900
            LNSVDSRMWKEAIKSELDSLAMNHTWELVDLPMGNKPIR                     
Sbjct: 841  LNSVDSRMWKEAIKSELDSLAMNHTWELVDLPMGNKPIRY-------------------- 900

Query: 901  LVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGNLEEEIY 960
                                                                        
Sbjct: 901  ------------------------------------------------------------ 960

Query: 961  MTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMV 1020
                                                                        
Sbjct: 961  ------------------------------------------------------------ 1020

Query: 1021 GADCILICLYVDDMLIFGTNMELITDTKYFLSSHFEMKDLGEADVILGVKIRKNKTSLSL 1080
                                                   LGEADVILGVKIRKNKTSLSL
Sbjct: 1021 ---------------------------------------LGEADVILGVKIRKNKTSLSL 1080

Query: 1081 CQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRP 1140
            CQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRP
Sbjct: 1081 CQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRP 1140

Query: 1141 DIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFKKFPAVLEGYCDANWVTDN 1200
            DIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFKKFPAVLEGYCDANWVTDN
Sbjct: 1141 DIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFKKFPAVLEGYCDANWVTDN 1167

Query: 1201 DEVNSTSGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEAEWIKNLLGDVPLW 1260
            DEVNSTSGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEAEWIKNLLGDVPLW
Sbjct: 1201 DEVNSTSGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEAEWIKNLLGDVPLW 1167

Query: 1261 GTSVPVSIQCDSQAAICTAKNSVYNGKSRHVRLRHAVVKQLLKEGTISLEFVRSEKNLAD 1320
            GTSVPVSIQCDSQAAICTAKNSVYNGKSRHVRLRHAVVKQLLKEGTISLEFVRSEKNLAD
Sbjct: 1261 GTSVPVSIQCDSQAAICTAKNSVYNGKSRHVRLRHAVVKQLLKEGTISLEFVRSEKNLAD 1167

Query: 1321 PLTKGLTRKMVLDSSVNMGLKPFGDP 1346
            PLTKGLTRKMVLDSSVNMGLKPFGDP
Sbjct: 1321 PLTKGLTRKMVLDSSVNMGLKPFGDP 1167

[Close]

BLAST of IVF0012330 vs. NCBI nr
Match: TYK23072.1 (ty1-copia retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 2259 bits (5855), Expect = 0.0
Identity = 1163/1346 (86.40%), Postives = 1164/1346 (86.48%), Query Frame = 0


Query: 1    MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTS 60
            M IKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTS
Sbjct: 1    MLIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTS 60

Query: 61   SDPESSTGPLTAVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAK 120
            SDPESSTGPLTAVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAK
Sbjct: 61   SDPESSTGPLTAVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAK 120

Query: 121  DIWSTLESRYGGDDAGRKKYVVGKWLQFQMNDDKPVVEQIHEYENLVANVLSEGMKMCEI 180
            DIWSTLESRYGGDDAGRKKYVVGKWLQFQMNDDKPVVEQIHEYENLVANVLSEGMKMCEI
Sbjct: 121  DIWSTLESRYGGDDAGRKKYVVGKWLQFQMNDDKPVVEQIHEYENLVANVLSEGMKMCEI 180

Query: 181  LQANVLLEKFPPSWNDYRNHLKHKKKDLRLPELISHMRTEEANRLKDKLASQNLNSVNAN 240
            LQANVLLEKFPPSWNDYRNHLKHKKKDLRLPELISHMRTEEANRLKDKLASQNLNSVNAN
Sbjct: 181  LQANVLLEKFPPSWNDYRNHLKHKKKDLRLPELISHMRTEEANRLKDKLASQNLNSVNAN 240

Query: 241  LVESSFVNRDRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG 300
            LVESSFVNRDRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG
Sbjct: 241  LVESSFVNRDRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG 300

Query: 301  RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTAD 360
            RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTAD
Sbjct: 301  RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTAD 360

Query: 361  GECVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVL 420
            GECVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVL
Sbjct: 361  GECVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVL 420

Query: 421  EGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASI 480
            EGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASI
Sbjct: 421  EGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASI 480

Query: 481  RKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASR 540
            RKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASR
Sbjct: 481  RKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASR 540

Query: 541  GGKNYYVSFVDDYSRYTKIYLIRTKNEAVSMFIKFKAESENQLGKRIKRLRSDRGGEYSD 600
            GGKNYYVSFVDDYSRYTKIYLIRTKNEAVSMFIKFKAESENQLGKRIKRLRSDRGGEYSD
Sbjct: 541  GGKNYYVSFVDDYSRYTKIYLIRTKNEAVSMFIKFKAESENQLGKRIKRLRSDRGGEYSD 600

Query: 601  KTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSA 660
            KTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSA
Sbjct: 601  KTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSA 660

Query: 661  CFILNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIG 720
            CFILNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIG
Sbjct: 661  CFILNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIG 720

Query: 721  YAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSET 780
            YAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSET
Sbjct: 721  YAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSET 780

Query: 781  VDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEA 840
            VDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEA
Sbjct: 781  VDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEA 840

Query: 841  LNSVDSRMWKEAIKSELDSLAMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKAR 900
            LNSVDSRMWKEAIKSELDSLAMNHTWELVDLPMGNKPIR                     
Sbjct: 841  LNSVDSRMWKEAIKSELDSLAMNHTWELVDLPMGNKPIRY-------------------- 900

Query: 901  LVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGNLEEEIY 960
                                                                        
Sbjct: 901  ------------------------------------------------------------ 960

Query: 961  MTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMV 1020
                                                                        
Sbjct: 961  ------------------------------------------------------------ 1020

Query: 1021 GADCILICLYVDDMLIFGTNMELITDTKYFLSSHFEMKDLGEADVILGVKIRKNKTSLSL 1080
                                                   LGEADVILGVKIRKNKTSLSL
Sbjct: 1021 ---------------------------------------LGEADVILGVKIRKNKTSLSL 1080

Query: 1081 CQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRP 1140
            CQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRP
Sbjct: 1081 CQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRP 1140

Query: 1141 DIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFKKFPAVLEGYCDANWVTDN 1200
            DIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFKKFPAVLEGYCDANWVTDN
Sbjct: 1141 DIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFKKFPAVLEGYCDANWVTDN 1167

Query: 1201 DEVNSTSGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEAEWIKNLLGDVPLW 1260
            DEVNSTSGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEAEWIKNLLGDVPLW
Sbjct: 1201 DEVNSTSGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEAEWIKNLLGDVPLW 1167

Query: 1261 GTSVPVSIQCDSQAAICTAKNSVYNGKSRHVRLRHAVVKQLLKEGTISLEFVRSEKNLAD 1320
            GTSVPVSIQC SQAAICTAKNSVYNGKSRH+RLRHAVVKQLLKEGTISLEFVRSEKNLAD
Sbjct: 1261 GTSVPVSIQCVSQAAICTAKNSVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRSEKNLAD 1167

Query: 1321 PLTKGLTRKMVLDSSVNMGLKPFGDP 1346
            PLTKGLTRKMVLDSSVNMGLKPFGDP
Sbjct: 1321 PLTKGLTRKMVLDSSVNMGLKPFGDP 1167

[Close]

BLAST of IVF0012330 vs. NCBI nr
Match: TYK07981.1 (ty1-copia retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 2257 bits (5848), Expect = 0.0
Identity = 1161/1346 (86.26%), Postives = 1162/1346 (86.33%), Query Frame = 0


Query: 1    MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTS 60
            MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPT DPPTTTSTS
Sbjct: 1    MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTFDPPTTTSTS 60

Query: 61   SDPESSTGPLTAVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAK 120
            SDPESSTGPLT VAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAK
Sbjct: 61   SDPESSTGPLTTVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAK 120

Query: 121  DIWSTLESRYGGDDAGRKKYVVGKWLQFQMNDDKPVVEQIHEYENLVANVLSEGMKMCEI 180
            DIWSTLESRYGGDDAGRKKYVVGKWLQFQMNDDKPVVEQIHEYENLVANVLSEGMKMCEI
Sbjct: 121  DIWSTLESRYGGDDAGRKKYVVGKWLQFQMNDDKPVVEQIHEYENLVANVLSEGMKMCEI 180

Query: 181  LQANVLLEKFPPSWNDYRNHLKHKKKDLRLPELISHMRTEEANRLKDKLASQNLNSVNAN 240
            LQANVLLEKFPPSWNDYRNHLKHKKKDLRLPELISHMRTEEANRLKDKLASQNLNSVNAN
Sbjct: 181  LQANVLLEKFPPSWNDYRNHLKHKKKDLRLPELISHMRTEEANRLKDKLASQNLNSVNAN 240

Query: 241  LVESSFVNRDRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG 300
            LVESSFVNRDRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG
Sbjct: 241  LVESSFVNRDRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG 300

Query: 301  RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTAD 360
            RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTAD
Sbjct: 301  RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTAD 360

Query: 361  GECVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVL 420
            GECVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVL
Sbjct: 361  GECVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVL 420

Query: 421  EGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASI 480
            EGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASI
Sbjct: 421  EGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASI 480

Query: 481  RKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASR 540
            RKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASR
Sbjct: 481  RKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASR 540

Query: 541  GGKNYYVSFVDDYSRYTKIYLIRTKNEAVSMFIKFKAESENQLGKRIKRLRSDRGGEYSD 600
            GGKNYYVSFVDDYSRYTKIYLIRTKNEAVSMFIKFKAESENQLGKRIKRLRSDRGGEYSD
Sbjct: 541  GGKNYYVSFVDDYSRYTKIYLIRTKNEAVSMFIKFKAESENQLGKRIKRLRSDRGGEYSD 600

Query: 601  KTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSA 660
            KTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSA
Sbjct: 601  KTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSA 660

Query: 661  CFILNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIG 720
            CFILNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIG
Sbjct: 661  CFILNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIG 720

Query: 721  YAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSET 780
            YAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSET
Sbjct: 721  YAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSET 780

Query: 781  VDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEA 840
            VDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEA
Sbjct: 781  VDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEA 840

Query: 841  LNSVDSRMWKEAIKSELDSLAMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKAR 900
            LNSVDSRMWKEAIKSELDSLAMNHTWELVDLPMGNKPIR                     
Sbjct: 841  LNSVDSRMWKEAIKSELDSLAMNHTWELVDLPMGNKPIRY-------------------- 900

Query: 901  LVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGNLEEEIY 960
                                                                        
Sbjct: 901  ------------------------------------------------------------ 960

Query: 961  MTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMV 1020
                                                                        
Sbjct: 961  ------------------------------------------------------------ 1020

Query: 1021 GADCILICLYVDDMLIFGTNMELITDTKYFLSSHFEMKDLGEADVILGVKIRKNKTSLSL 1080
                                                   LGEADVILGVKIRKNKTSLSL
Sbjct: 1021 ---------------------------------------LGEADVILGVKIRKNKTSLSL 1080

Query: 1081 CQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRP 1140
            CQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRP
Sbjct: 1081 CQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRP 1140

Query: 1141 DIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFKKFPAVLEGYCDANWVTDN 1200
            DIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHF KFPAVLEGYCDANWVTDN
Sbjct: 1141 DIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDN 1167

Query: 1201 DEVNSTSGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEAEWIKNLLGDVPLW 1260
            DEVNSTSGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEAEWIKNLLGDVPLW
Sbjct: 1201 DEVNSTSGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEAEWIKNLLGDVPLW 1167

Query: 1261 GTSVPVSIQCDSQAAICTAKNSVYNGKSRHVRLRHAVVKQLLKEGTISLEFVRSEKNLAD 1320
            GTSVPVSIQCDSQAAICTAKNSVYNGKSRH+RLRHAVVKQLLKEGTISLEFVRSEKNLAD
Sbjct: 1261 GTSVPVSIQCDSQAAICTAKNSVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRSEKNLAD 1167

Query: 1321 PLTKGLTRKMVLDSSVNMGLKPFGDP 1346
            PLTKGLTRKMVLDSSVNM LKPFGDP
Sbjct: 1321 PLTKGLTRKMVLDSSVNMDLKPFGDP 1167

[Close]

BLAST of IVF0012330 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 339.0 bits (868), Expect = 1.8e-92
Identity = 181/487 (37.17%), Postives = 288/487 (59.14%), Query Frame = 0


Query: 832  EDPKTYQEALNSVDSRMWKEAIKSELDSLAMNHTWELVDLPMGNKPIRCKWIFKRKTKPN 891
            ++P TY EA   +   +W  A+  E+ ++   HTWE+  LP   KPI CKW++K K   +
Sbjct: 84   KEPSTYNEAKEFL---VWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSD 143

Query: 892  GLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFL 951
            G IERYKARLV  GYTQ++G+D+ +T+SPV K+T+++ ++A++AI+N  +HQ+D+  AFL
Sbjct: 144  GTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFL 203

Query: 952  NGNLEEEIYMTQPEGFKI----SGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFK 1011
            NG+L+EEIYM  P G+      S   N VC L+KS+YGLKQA +QW+ KF+ TLI  GF 
Sbjct: 204  NGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFV 263

Query: 1012 INSSDTCVYSKMVGADCILICLYVDDMLIFGTNMELITDTKYFLSSHFEMKDLGEADVIL 1071
             + SD   + K+     + + +YVDD++I   N   + + K  L S F+++DLG     L
Sbjct: 264  QSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFL 323

Query: 1072 GVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNK-GDSVSQPEYAK 1131
            G++I ++   +++CQ  Y   +L +       P   P D S     +  GD V    Y +
Sbjct: 324  GLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRR 383

Query: 1132 IIGSVMYLMNYTRPDIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFKKFPA 1191
            +IG +MYL   TR DI++AV++LS+++  P   H  A+  +L Y+KGT+   L +     
Sbjct: 384  LIGRLMYL-QITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAE 443

Query: 1192 V-LEGYCDANWVTDNDEVNSTSGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQ 1251
            + L+ + DA++ +  D   ST+GY   LG   ISWKS KQ  +++S+ E+E+ AL  A  
Sbjct: 444  MQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATD 503

Query: 1252 EAEWIKNLLGDVPLWGTSVPVSIQCDSQAAICTAKNSVYNGKSRHVRLR-HAVVKQLLKE 1311
            E  W+     ++ L   S P  + CD+ AAI  A N+V++ +++H+    H+V ++ + +
Sbjct: 504  EMMWLAQFFRELQL-PLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQ 563

[Close]

BLAST of IVF0012330 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 143.7 bits (361), Expect = 1.1e-33
Identity = 77/224 (34.38%), Postives = 124/224 (55.36%), Query Frame = 0


Query: 1027 ICLYVDDMLIFGTNMELITDTKYFLSSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYV 1086
            + LYVDD+L+ G++  L+    + LSS F MKDLG     LG++I+ + + L L Q+ Y 
Sbjct: 3    LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 1087 EKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAV 1146
            E+IL      D  P+ TP     +   +        ++  I+G++ YL   TRPDI+YAV
Sbjct: 63   EQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYL-TLTRPDISYAV 122

Query: 1147 SRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFKKFPAV-LEGYCDANWVTDNDEVNS 1206
            + + +  H P    +D L+ +LRY+KGTI + L+  K   + ++ +CD++W        S
Sbjct: 123  NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRS 182

Query: 1207 TSGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEAEW 1250
            T+G+   LG   ISW + +Q  ++RS+ E+E+ AL L   E  W
Sbjct: 183  TTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of IVF0012330 vs. TAIR 10
Match: AT4G00980.1 (zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 95.1 bits (235), Expect = 4.5e-19
Identity = 70/284 (24.65%), Postives = 139/284 (48.94%), Query Frame = 0


Query: 15  KLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTAVA 74
           K+   DG +Y  W+ ++ +F +QL++ YVL      S+P  +  +S  PE++   +T   
Sbjct: 194 KISRFDGKSYLYWASQMELFLKQLKLTYVL------SEPCPSIGSSQGPETNPREITRAD 253

Query: 75  VTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQ-KSAKDIWSTLESRYGGD 134
            T           +K+ +D+     HL+N +SD ++  +  + K AK++W  L+  Y  D
Sbjct: 254 ATG----------KKWLRDDYLCYTHLMNSLSDHLYRRYSQKFKHAKELWDELKWVYQCD 313

Query: 135 DAGRKKYVVGKWLQFQMNDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPPS 194
           ++  K+  V K+++F+M +++P++EQ+  +  +  +++S GM + E    + ++ KFPPS
Sbjct: 314 ESKSKRSQVRKYIEFRMVEERPILEQVQVFNKIADSIVSAGMFLDEAFHVSTIISKFPPS 373

Query: 195 WNDYRNHLKHKKKDLRLPELISHMRTEEANRLKDKLASQNLNSVNANLVE--SSFVNRDR 254
           W  +   L  +++ L +  L+  ++ EE              +  ++ +E   S     R
Sbjct: 374 WRGFCTRLM-EEEYLPVWMLMERVKAEEELLRNGAKGVTYRPATGSSQMERTPSLGTTHR 433

Query: 255 TKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQC 296
             Q  G K K  E+ +         +  +VC  CG++GH +  C
Sbjct: 434 GSQSVGWKRKEPERDE---------RVIIVCDNCGRKGHLAKHC 451

[Close]

BLAST of IVF0012330 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 87.4 bits (215), Expect = 9.4e-17
Identity = 42/105 (40.00%), Postives = 66/105 (62.86%), Query Frame = 0


Query: 830 IDEDPKTYQEALNSVDSRMWKEAIKSELDSLAMNHTWELVDLPMGNKPIRCKWIFKRKTK 889
           I ++PK+   AL       W +A++ ELD+L+ N TW LV  P+    + CKW+FK K  
Sbjct: 24  IKKEPKSVIFALKDPG---WCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLH 83

Query: 890 PNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALA 935
            +G ++R KARLV  G+ Q++G+ + +TYSPV +  TIR ++ +A
Sbjct: 84  SDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125

[Close]

BLAST of IVF0012330 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 47.8 bits (112), Expect = 8.2e-05
Identity = 26/83 (31.33%), Postives = 46/83 (55.42%), Query Frame = 0


Query: 1132 MYLMNYTRPDIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFKKFPAV-LEG 1191
            MYL   TRPD+ +AV+RLS+++         A+  +L Y+KGT+   L +     + L+ 
Sbjct: 1    MYL-TITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKA 60

Query: 1192 YCDANWVTDNDEVNSTSGYVFLL 1214
            + D++W +  D   S +G+  L+
Sbjct: 61   FADSDWASCPDTRRSVTGFCSLV 82

The following BLAST results are available for this feature:

BLAST of IVF0012330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	8.1e-207	34.33	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	1.6e-146	27.91	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	4.4e-144	27.38	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	7.5e-144	27.29	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P25600	4.5e-40	34.78	Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT...	[more]

BLAST of IVF0012330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C5T2	0.0e+00	100.00	Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7UTD6	0.0e+00	86.63	Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3BWR7	0.0e+00	86.40	Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3DHN5	0.0e+00	86.40	Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3C7Z8	0.0e+00	86.26	Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of IVF0012330 vs. NCBI nr


Match Name	Identity	Description
TYK06518.1	100.00	ty1-copia retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0056761.1	86.63	ty1-copia retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK02676.1	86.40	ty1-copia retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK23072.1	86.40	ty1-copia retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK07981.1	86.26	ty1-copia retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of IVF0012330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	1.8e-92	37.17	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	1.1e-33	34.38	DNA/RNA polymerases superfamily protein	[more]
AT4G00980.1	4.5e-19	24.65	zinc knuckle (CCHC-type) family protein	[more]
ATMG00820.1	9.4e-17	40.00	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
ATMG00240.1	8.2e-05	31.33	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 281..297 e-value: 0.0059 score: 25.0
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 282..297 score: 9.504374
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 517..692 e-value: 2.2E-44 score: 153.1
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 442..507 e-value: 1.7E-11 score: 43.8
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 863..1105 e-value: 6.9E-80 score: 268.1
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 524..622 e-value: 9.2E-14 score: 51.6
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 511..684 score: 25.738873
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 92..224 e-value: 5.0E-17 score: 62.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 248..272
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 296..312
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 293..312
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 248..266
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..71
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 335..1216
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 1189..1329 e-value: 1.25595E-57 score: 193.454
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 525..692
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 863..1293
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 265..303

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0012330.1	IVF0012330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding