IVF0012297 (gene) Melon (IVF77) v1

Overview


Name	IVF0012297
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	60S ribosomal protein L8
Location	chr08: 5860106 .. 5861980 (-)
RNA-Seq Expression	IVF0012297
Synteny	IVF0012297

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCTTTTATCGCTGCGGTACCGAACTGAAAATCTCCGATCTCGCGGAGCCGCCATGGGAAGAGTCATTCGTGCTCAACGTAAGGGAGCGGGATCTGTCTTCAGGTCCCATACACATCATCGGAAGGGTCCGGCCAGGTTTAGAAGTCTTGATTTCGGCGAACGAAATGGTTATCTGAAAGGAGTCGTCACTGAGATTATTCACGACCCTGGCCGTGGAGCGCCACTTGCTCGAGTTTCCTTCCGCCATCCTTTCAGGTATAAGAAACAGAATGAGCTGTTCGTTGCGGCCGAGGGTATGTACACTGGCCAATTTGTTTACTGCGGGAAGAAAGCAAATCTTGTGGTTGGAAATGTCTTGCCCATCAGGTCGATCCCTGAAGGTGCCGTCGTCTGCAACGTTGAACACCATGTTGGTGATCGTGGTGTTTTTGCCAGGTGTTCGGGAGACTACGCTATTGTTATCAGTCACAATCCCGATAACGACACATCCAGGTTTGGTGATGAGTTATTGGTTTTTGTTTAATTCGTTTGATATCATCTATAAACATACTTTTTCTTATCGCGTTTGTATGTTATTTTGCGTTAATATTATGTTTAATTGTTGCACCAACGTAGCTAATAAGTCTAATCTAATGAGTGTAGTTAACCTTTCACCTATACGAACAAATTTAGTACAAGAAGATGTATTGCCTTGACATCTCGAAGAGGCTCGAGAAGGTTTTTGAGAGAGGAAGAGAAAGGCGAATGAGAGTGGAACGGGATAAATATGAAAAGAGGAGAATTAATAAACGAGAACAAAAATTAGGGTGAGAAGTAAAAGCAGAAGAAATCAAATAAAGAACCGTCAAGGAGAGATAATAGATCCAAAATTGAGATTAGGGTTGAATTTTGACTGAAAAATTATTGACCTACCTGAAGTTTGACAGTTAATTTTCGCATGACTCTTGATGGGTTGTTCTGTGAACTTTATCTCTTGTAATGATCTTAATTGATATGGCAATAAAATTGCAAACTTTTGGTGCTTGCAAGATAGGTTCTAATTGATTGTCCAGGTTGAATAACTATCGTAGGCTCCATTCCCGGTTGTTGGAATTTAATAATTTAAGTTATTGATTCTTTTCTATTTTTGTTGTTTGGTGTTGGGTGCTGAACTGTATTGATGTTTAATTCTTGTTTTAAACTTTGCTGCCTTATGGTATTTTATCTTTTTGTGTGTGATTGATTGGTAATTAACAGATTGGTGACATTTGATTCTAGCTTGTGTGGATTCATTCAAACATTTTGTCTGATGTTCGTTTCTTAATAACAATCAGGATCAAGCTTCCATCCGGTGCGAAGAAAATAGTTCCAAGTGGGTGCCGTGCCATGGTTGGTCAGGTTGCAGGTGGAGGCAGGACTGAGAAGCCCCTCTTGAAGGCTGGTAATGCTTACCATAAATTTAGAGTGAAGAGGAACTGCTGGCCGAAGGTCCGTGGTGTTGCAATGAATCCCGTTGAGCATCCTCATGGAGGAGGTAACCATCAACACATTGGACATGCCAGCACAGTCAGACGGGATGCTCCTCCGGGTCAAAAGGTTGGTCTCATTGCAGCAAGAAGAACTGGTAGGCTCAGAGGACAAGCTGCAGCAACTGCCGCTAAAGCCGATAAGGCATAGACAGTATTATAATTTAGATTGTTACTTCGGTTTTGAGATCATTTCATTTTACTTTTATCTATCAATTTTTCCAAGACTAGTCGTGTACGACCAATATAACTTTTTGAGAAACTGTTATCGAGTTCCTGTCTTCACAAATTTGAAATTTTGGTTTGTTTTTTCCCGTATGAGTTTGTTACGATAAATATTTGGCTGATTCTTATTTCCATTTTGTTTG

mRNA sequence

TCTCTTTTATCGCTGCGGTACCGAACTGAAAATCTCCGATCTCGCGGAGCCGCCATGGGAAGAGTCATTCGTGCTCAACGTAAGGGAGCGGGATCTGTCTTCAGGTCCCATACACATCATCGGAAGGGTCCGGCCAGGTTTAGAAGTCTTGATTTCGGCGAACGAAATGGTTATCTGAAAGGAGTCGTCACTGAGATTATTCACGACCCTGGCCGTGGAGCGCCACTTGCTCGAGTTTCCTTCCGCCATCCTTTCAGGTATAAGAAACAGAATGAGCTGTTCGTTGCGGCCGAGGGTATGTACACTGGCCAATTTGTTTACTGCGGGAAGAAAGCAAATCTTGTGGTTGGAAATGTCTTGCCCATCAGGTCGATCCCTGAAGGTGCCGTCGTCTGCAACGTTGAACACCATGTTGGTGATCGTGGTGTTTTTGCCAGGTGTTCGGGAGACTACGCTATTGTTATCAGTCACAATCCCGATAACGACACATCCAGGATCAAGCTTCCATCCGGTGCGAAGAAAATAGTTCCAAGTGGGTGCCGTGCCATGGTTGGTCAGGTTGCAGGTGGAGGCAGGACTGAGAAGCCCCTCTTGAAGGCTGGTAATGCTTACCATAAATTTAGAGTGAAGAGGAACTGCTGGCCGAAGGTCCGTGGTGTTGCAATGAATCCCGTTGAGCATCCTCATGGAGGAGGTAACCATCAACACATTGGACATGCCAGCACAGTCAGACGGGATGCTCCTCCGGGTCAAAAGGTTGGTCTCATTGCAGCAAGAAGAACTGGTAGGCTCAGAGGACAAGCTGCAGCAACTGCCGCTAAAGCCGATAAGGCATAGACAGTATTATAATTTAGATTGTTACTTCGGTTTTGAGATCATTTCATTTTACTTTTATCTATCAATTTTTCCAAGACTAGTCGTGTACGACCAATATAACTTTTTGAGAAACTGTTATCGAGTTCCTGTCTTCACAAATTTGAAATTTTGGTTTGTTTTTTCCCGTATGAGTTTGTTACGATAAATATTTGGCTGATTCTTATTTCCATTTTGTTTG

Coding sequence (CDS)

ATGGGAAGAGTCATTCGTGCTCAACGTAAGGGAGCGGGATCTGTCTTCAGGTCCCATACACATCATCGGAAGGGTCCGGCCAGGTTTAGAAGTCTTGATTTCGGCGAACGAAATGGTTATCTGAAAGGAGTCGTCACTGAGATTATTCACGACCCTGGCCGTGGAGCGCCACTTGCTCGAGTTTCCTTCCGCCATCCTTTCAGGTATAAGAAACAGAATGAGCTGTTCGTTGCGGCCGAGGGTATGTACACTGGCCAATTTGTTTACTGCGGGAAGAAAGCAAATCTTGTGGTTGGAAATGTCTTGCCCATCAGGTCGATCCCTGAAGGTGCCGTCGTCTGCAACGTTGAACACCATGTTGGTGATCGTGGTGTTTTTGCCAGGTGTTCGGGAGACTACGCTATTGTTATCAGTCACAATCCCGATAACGACACATCCAGGATCAAGCTTCCATCCGGTGCGAAGAAAATAGTTCCAAGTGGGTGCCGTGCCATGGTTGGTCAGGTTGCAGGTGGAGGCAGGACTGAGAAGCCCCTCTTGAAGGCTGGTAATGCTTACCATAAATTTAGAGTGAAGAGGAACTGCTGGCCGAAGGTCCGTGGTGTTGCAATGAATCCCGTTGAGCATCCTCATGGAGGAGGTAACCATCAACACATTGGACATGCCAGCACAGTCAGACGGGATGCTCCTCCGGGTCAAAAGGTTGGTCTCATTGCAGCAAGAAGAACTGGTAGGCTCAGAGGACAAGCTGCAGCAACTGCCGCTAAAGCCGATAAGGCATAG

Protein sequence

MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA

Homology

[Close]

BLAST of IVF0012297 vs. ExPASy Swiss-Prot
Match: P29766 (60S ribosomal protein L8 OS=Solanum lycopersicum OX=4081 GN=RPL8 PE=2 SV=1)

HSP 1 Score: 509.6 bits (1311), Expect = 2.1e-143
Identity = 242/260 (93.08%), Postives = 254/260 (97.69%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVF+SHTHHRKGPARFR+LDFGERNGYLKGV+TE+IHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRTLDFGERNGYLKGVITEVIHDPGRGAPLAR 60

Query: 61  VSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRSIPEGAVVCNVEHHV 120
           V+FRHPFRYK Q ELFVAAEGMYTGQFVYCGKKA L+VGNVLP+RSIPEGAVVCNVEH V
Sbjct: 61  VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKATLMVGNVLPLRSIPEGAVVCNVEHKV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDN T+R+KLPSGAKKIVPSGCRAM+GQVAGGGRTEKP+L
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNGTTRVKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPML 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATAAKADKA 261
           RRTGRLRGQA ATAAKADKA
Sbjct: 241 RRTGRLRGQARATAAKADKA 260

[Close]

BLAST of IVF0012297 vs. ExPASy Swiss-Prot
Match: Q42064 (60S ribosomal protein L8-3 OS=Arabidopsis thaliana OX=3702 GN=RPL8C PE=2 SV=2)

HSP 1 Score: 506.9 bits (1304), Expect = 1.3e-142
Identity = 240/258 (93.02%), Postives = 254/258 (98.45%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVF+SHTHHRKGPA+FRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 61  VSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRSIPEGAVVCNVEHHV 120
           V+FRHPFR+KKQ ELFVAAEGMYTGQF+YCGKKA LVVGNVLP+RSIPEGAV+CNVEHHV
Sbjct: 61  VAFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVICNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGVFAR SGDYAIVI+HNPDNDTSRIKLPSG+KKIVPSGCRAM+GQVAGGGRTEKP+L
Sbjct: 121 GDRGVFARASGDYAIVIAHNPDNDTSRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPML 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPG+KVGLIAA
Sbjct: 181 KAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGKKVGLIAA 240

Query: 241 RRTGRLRGQAAATAAKAD 259
           RRTGRLRGQAAA A+KAD
Sbjct: 241 RRTGRLRGQAAALASKAD 258

[Close]

BLAST of IVF0012297 vs. ExPASy Swiss-Prot
Match: P46286 (60S ribosomal protein L8-1 OS=Arabidopsis thaliana OX=3702 GN=RPL8A PE=1 SV=2)

HSP 1 Score: 501.5 bits (1290), Expect = 5.7e-141
Identity = 239/258 (92.64%), Postives = 253/258 (98.06%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVF+SHTHHRKGPA+FRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 61  VSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRSIPEGAVVCNVEHHV 120
           V+FRHPFR+KKQ ELFVAAEGMYTGQF+YCGKKA LVVGNVLP+RSIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGV AR SGDYAIVI+HNPD+DT+RIKLPSG+KKIVPSGCRAM+GQVAGGGRTEKP+L
Sbjct: 121 GDRGVLARASGDYAIVIAHNPDSDTTRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPML 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHK+RVKRN WPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATAAKAD 259
           RRTGRLRGQAAA+AAKAD
Sbjct: 241 RRTGRLRGQAAASAAKAD 258

[Close]

BLAST of IVF0012297 vs. ExPASy Swiss-Prot
Match: P25998 (60S ribosomal protein L8 OS=Nicotiana tabacum OX=4097 GN=RPL8 PE=2 SV=1)

HSP 1 Score: 497.7 bits (1280), Expect = 8.2e-140
Identity = 237/260 (91.15%), Postives = 250/260 (96.15%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60
           MGR+IRAQRKGAGSVF+SHTHHRKGPARFRSLDFGERNGYLKGV+TE+IHDPGRGAPLAR
Sbjct: 1   MGRLIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEVIHDPGRGAPLAR 60

Query: 61  VSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRSIPEGAVVCNVEHHV 120
           V+FR+PFRY  Q ELFVAAEGMYTGQFVYCGKKA L+VGNVLP+RSIPEGAVVCNVEH V
Sbjct: 61  VTFRYPFRYNHQKELFVAAEGMYTGQFVYCGKKATLMVGNVLPLRSIPEGAVVCNVEHKV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGVFARCSG YAIVISHNPDN T+RIKLPSG+KKIVPSGCR M+GQVAGGGRTEKP+L
Sbjct: 121 GDRGVFARCSGAYAIVISHNPDNGTTRIKLPSGSKKIVPSGCRRMIGQVAGGGRTEKPML 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTV RDAPPGQKVGLIA 
Sbjct: 181 KAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVARDAPPGQKVGLIAG 240

Query: 241 RRTGRLRGQAAATAAKADKA 261
           RRTGRLRGQAAATAAKADKA
Sbjct: 241 RRTGRLRGQAAATAAKADKA 260

[Close]

BLAST of IVF0012297 vs. ExPASy Swiss-Prot
Match: Q4PSL7 (60S ribosomal protein L8-2 OS=Arabidopsis thaliana OX=3702 GN=RPL8B PE=2 SV=3)

HSP 1 Score: 457.2 bits (1175), Expect = 1.2e-127
Identity = 218/259 (84.17%), Postives = 239/259 (92.28%), Query Frame = 0


Query: 1   MGRVIRAQRKG-AGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLA 60
           MGRVIRAQRKG AGSVF+SHTHHRKGPA+FRSLD+GERNGYLKG+VTEIIHDPGRGAPLA
Sbjct: 1   MGRVIRAQRKGAAGSVFKSHTHHRKGPAKFRSLDYGERNGYLKGLVTEIIHDPGRGAPLA 60

Query: 61  RVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRSIPEGAVVCNVEHH 120
           RV+FRHPFRY KQ ELFVAAEGMYTGQ++YCGKKANL+VGNVLP+ SIPEGAV+CNVE H
Sbjct: 61  RVAFRHPFRYMKQKELFVAAEGMYTGQYLYCGKKANLMVGNVLPLGSIPEGAVICNVELH 120

Query: 121 VGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMVGQVAGGGRTEKPL 180
           VGDRG  AR SGDYAIVI+HNP+++T+R+KLPSG+KKI+PS CRAM+GQVAGGGRTEKPL
Sbjct: 121 VGDRGALARASGDYAIVIAHNPESNTTRVKLPSGSKKILPSACRAMIGQVAGGGRTEKPL 180

Query: 181 LKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIA 240
           LKAGNAYHK++ KRNCWP VRGVAMNPVEHPHGGGNHQHIGHASTVRRD   G KVG IA
Sbjct: 181 LKAGNAYHKYKAKRNCWPVVRGVAMNPVEHPHGGGNHQHIGHASTVRRDKSAGAKVGQIA 240

Query: 241 ARRTGRLRGQAAATAAKAD 259
           ARRTGR RG AA  AAKAD
Sbjct: 241 ARRTGRRRGAAATLAAKAD 259

[Close]

BLAST of IVF0012297 vs. ExPASy TrEMBL
Match: A0A5D3CL65 (60S ribosomal protein L8-3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001430 PE=3 SV=1)

HSP 1 Score: 534.6 bits (1376), Expect = 2.2e-148
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 61  VSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRSIPEGAVVCNVEHHV 120
           VSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRSIPEGAVVCNVEHHV
Sbjct: 61  VSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRSIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMVGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMVGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATAAKADKA 261
           RRTGRLRGQAAATAAKADKA
Sbjct: 241 RRTGRLRGQAAATAAKADKA 260

[Close]

BLAST of IVF0012297 vs. ExPASy TrEMBL
Match: A0A1S3B1I8 (60S ribosomal protein L8-3 OS=Cucumis melo OX=3656 GN=LOC103485115 PE=3 SV=1)

HSP 1 Score: 534.6 bits (1376), Expect = 2.2e-148
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 61  VSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRSIPEGAVVCNVEHHV 120
           VSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRSIPEGAVVCNVEHHV
Sbjct: 61  VSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRSIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMVGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMVGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATAAKADKA 261
           RRTGRLRGQAAATAAKADKA
Sbjct: 241 RRTGRLRGQAAATAAKADKA 260

[Close]

BLAST of IVF0012297 vs. ExPASy TrEMBL
Match: A0A0A0KKM7 (Ribosomal_L2_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G505310 PE=3 SV=1)

HSP 1 Score: 533.1 bits (1372), Expect = 6.5e-148
Identity = 258/260 (99.23%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVF+SHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 61  VSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRSIPEGAVVCNVEHHV 120
           VSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGNVLP+RSIPEGAVVCNVEHHV
Sbjct: 61  VSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGNVLPVRSIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMVGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMVGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATAAKADKA 261
           RRTGRLRGQAAATAAKADKA
Sbjct: 241 RRTGRLRGQAAATAAKADKA 260

[Close]

BLAST of IVF0012297 vs. ExPASy TrEMBL
Match: A0A6J1BUD7 (60S ribosomal protein L8 OS=Momordica charantia OX=3673 GN=LOC111005865 PE=3 SV=1)

HSP 1 Score: 528.1 bits (1359), Expect = 2.1e-146
Identity = 252/260 (96.92%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVF+SHTHHRKGPARFRSLDFGERNGYLKGV+TEI+HDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIVHDPGRGAPLAR 60

Query: 61  VSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRSIPEGAVVCNVEHHV 120
           V+FRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANL+VGNVLP+RSIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSG+KK+VPSGCRAMVGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATAAKADKA 261
           RRTGRLRGQAAATAAKADKA
Sbjct: 241 RRTGRLRGQAAATAAKADKA 260

[Close]

BLAST of IVF0012297 vs. ExPASy TrEMBL
Match: W9T0U7 (60S ribosomal protein L8 OS=Morus notabilis OX=981085 GN=L484_026700 PE=3 SV=1)

HSP 1 Score: 527.3 bits (1357), Expect = 3.6e-146
Identity = 252/260 (96.92%), Postives = 259/260 (99.62%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVF+SHTHHRKGPARFRSLDFGERNGYLKGV+T+IIHDPGRGAPLA+
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITDIIHDPGRGAPLAK 60

Query: 61  VSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRSIPEGAVVCNVEHHV 120
           VSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKA LVVGNVLPIRSIPEGAV+CNVEHHV
Sbjct: 61  VSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKATLVVGNVLPIRSIPEGAVICNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYA+VISHNPDNDTSRIKLPSGAKKIVPSGCRAM+GQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAVVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATAAKADKA 261
           RRTGRLRGQAAATAAKADKA
Sbjct: 241 RRTGRLRGQAAATAAKADKA 260

[Close]

BLAST of IVF0012297 vs. NCBI nr
Match: XP_008440805.1 (PREDICTED: 60S ribosomal protein L8-3 [Cucumis melo] >KAA0025686.1 60S ribosomal protein L8-3 [Cucumis melo var. makuwa] >TYK12561.1 60S ribosomal protein L8-3 [Cucumis melo var. makuwa])

HSP 1 Score: 533 bits (1372), Expect = 4.65e-191
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 61  VSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRSIPEGAVVCNVEHHV 120
           VSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRSIPEGAVVCNVEHHV
Sbjct: 61  VSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRSIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMVGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMVGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATAAKADKA 260
           RRTGRLRGQAAATAAKADKA
Sbjct: 241 RRTGRLRGQAAATAAKADKA 260

[Close]

BLAST of IVF0012297 vs. NCBI nr
Match: XP_004134871.1 (60S ribosomal protein L8-3 [Cucumis sativus] >XP_038883668.1 60S ribosomal protein L8-3 [Benincasa hispida] >KGN48902.1 hypothetical protein Csa_004176 [Cucumis sativus])

HSP 1 Score: 531 bits (1368), Expect = 1.89e-190
Identity = 258/260 (99.23%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVF+SHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 61  VSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRSIPEGAVVCNVEHHV 120
           VSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGNVLP+RSIPEGAVVCNVEHHV
Sbjct: 61  VSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGNVLPVRSIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMVGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMVGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATAAKADKA 260
           RRTGRLRGQAAATAAKADKA
Sbjct: 241 RRTGRLRGQAAATAAKADKA 260

[Close]

BLAST of IVF0012297 vs. NCBI nr
Match: XP_022133211.1 (60S ribosomal protein L8 [Momordica charantia])

HSP 1 Score: 526 bits (1355), Expect = 1.82e-188
Identity = 252/260 (96.92%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVF+SHTHHRKGPARFRSLDFGERNGYLKGV+TEI+HDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIVHDPGRGAPLAR 60

Query: 61  VSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRSIPEGAVVCNVEHHV 120
           V+FRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANL+VGNVLP+RSIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSG+KK+VPSGCRAMVGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATAAKADKA 260
           RRTGRLRGQAAATAAKADKA
Sbjct: 241 RRTGRLRGQAAATAAKADKA 260

[Close]

BLAST of IVF0012297 vs. NCBI nr
Match: XP_010113368.1 (60S ribosomal protein L8-3 [Morus notabilis] >EXC35375.1 60S ribosomal protein L8 [Morus notabilis])

HSP 1 Score: 525 bits (1353), Expect = 3.67e-188
Identity = 252/260 (96.92%), Postives = 259/260 (99.62%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVF+SHTHHRKGPARFRSLDFGERNGYLKGV+T+IIHDPGRGAPLA+
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITDIIHDPGRGAPLAK 60

Query: 61  VSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRSIPEGAVVCNVEHHV 120
           VSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKA LVVGNVLPIRSIPEGAV+CNVEHHV
Sbjct: 61  VSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKATLVVGNVLPIRSIPEGAVICNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYA+VISHNPDNDTSRIKLPSGAKKIVPSGCRAM+GQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAVVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATAAKADKA 260
           RRTGRLRGQAAATAAKADKA
Sbjct: 241 RRTGRLRGQAAATAAKADKA 260

[Close]

BLAST of IVF0012297 vs. NCBI nr
Match: XP_023873292.1 (60S ribosomal protein L8-3 [Quercus suber] >XP_023874783.1 60S ribosomal protein L8-3 [Quercus suber] >XP_023874791.1 60S ribosomal protein L8-3 [Quercus suber] >XP_030944521.1 60S ribosomal protein L8-3 [Quercus lobata] >KAF3957341.1 hypothetical protein CMV_017639 [Castanea mollissima] >KAF3963308.1 hypothetical protein CMV_012282 [Castanea mollissima] >KAF3963310.1 hypothetical protein CMV_012284 [Castanea mollissima])

HSP 1 Score: 525 bits (1352), Expect = 5.21e-188
Identity = 252/260 (96.92%), Postives = 259/260 (99.62%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVF+SHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 61  VSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRSIPEGAVVCNVEHHV 120
           ++FRHPFRYKKQNELFVAAEGMYTGQFVYCGKKA LVVGNVLP+RSIPEGAVVCNVEHHV
Sbjct: 61  ITFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKATLVVGNVLPLRSIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSR+KLPSGAKKIVPSGCRAM+GQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRVKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATAAKADKA 260
           RRTGRLRGQAAATA+KADKA
Sbjct: 241 RRTGRLRGQAAATASKADKA 260

[Close]

BLAST of IVF0012297 vs. TAIR 10
Match: AT4G36130.1 (Ribosomal protein L2 family )

HSP 1 Score: 506.9 bits (1304), Expect = 9.6e-144
Identity = 240/258 (93.02%), Postives = 254/258 (98.45%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVF+SHTHHRKGPA+FRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 61  VSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRSIPEGAVVCNVEHHV 120
           V+FRHPFR+KKQ ELFVAAEGMYTGQF+YCGKKA LVVGNVLP+RSIPEGAV+CNVEHHV
Sbjct: 61  VAFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVICNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGVFAR SGDYAIVI+HNPDNDTSRIKLPSG+KKIVPSGCRAM+GQVAGGGRTEKP+L
Sbjct: 121 GDRGVFARASGDYAIVIAHNPDNDTSRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPML 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPG+KVGLIAA
Sbjct: 181 KAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGKKVGLIAA 240

Query: 241 RRTGRLRGQAAATAAKAD 259
           RRTGRLRGQAAA A+KAD
Sbjct: 241 RRTGRLRGQAAALASKAD 258

[Close]

BLAST of IVF0012297 vs. TAIR 10
Match: AT2G18020.1 (Ribosomal protein L2 family )

HSP 1 Score: 501.5 bits (1290), Expect = 4.0e-142
Identity = 239/258 (92.64%), Postives = 253/258 (98.06%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVF+SHTHHRKGPA+FRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 61  VSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRSIPEGAVVCNVEHHV 120
           V+FRHPFR+KKQ ELFVAAEGMYTGQF+YCGKKA LVVGNVLP+RSIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGV AR SGDYAIVI+HNPD+DT+RIKLPSG+KKIVPSGCRAM+GQVAGGGRTEKP+L
Sbjct: 121 GDRGVLARASGDYAIVIAHNPDSDTTRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPML 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHK+RVKRN WPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATAAKAD 259
           RRTGRLRGQAAA+AAKAD
Sbjct: 241 RRTGRLRGQAAASAAKAD 258

[Close]

BLAST of IVF0012297 vs. TAIR 10
Match: AT3G51190.1 (Ribosomal protein L2 family )

HSP 1 Score: 457.2 bits (1175), Expect = 8.7e-129
Identity = 218/259 (84.17%), Postives = 239/259 (92.28%), Query Frame = 0


Query: 1   MGRVIRAQRKG-AGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLA 60
           MGRVIRAQRKG AGSVF+SHTHHRKGPA+FRSLD+GERNGYLKG+VTEIIHDPGRGAPLA
Sbjct: 1   MGRVIRAQRKGAAGSVFKSHTHHRKGPAKFRSLDYGERNGYLKGLVTEIIHDPGRGAPLA 60

Query: 61  RVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRSIPEGAVVCNVEHH 120
           RV+FRHPFRY KQ ELFVAAEGMYTGQ++YCGKKANL+VGNVLP+ SIPEGAV+CNVE H
Sbjct: 61  RVAFRHPFRYMKQKELFVAAEGMYTGQYLYCGKKANLMVGNVLPLGSIPEGAVICNVELH 120

Query: 121 VGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMVGQVAGGGRTEKPL 180
           VGDRG  AR SGDYAIVI+HNP+++T+R+KLPSG+KKI+PS CRAM+GQVAGGGRTEKPL
Sbjct: 121 VGDRGALARASGDYAIVIAHNPESNTTRVKLPSGSKKILPSACRAMIGQVAGGGRTEKPL 180

Query: 181 LKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIA 240
           LKAGNAYHK++ KRNCWP VRGVAMNPVEHPHGGGNHQHIGHASTVRRD   G KVG IA
Sbjct: 181 LKAGNAYHKYKAKRNCWPVVRGVAMNPVEHPHGGGNHQHIGHASTVRRDKSAGAKVGQIA 240

Query: 241 ARRTGRLRGQAAATAAKAD 259
           ARRTGR RG AA  AAKAD
Sbjct: 241 ARRTGRRRGAAATLAAKAD 259

[Close]

BLAST of IVF0012297 vs. TAIR 10
Match: ATCG00830.1 (ribosomal protein L2 )

HSP 1 Score: 103.6 bits (257), Expect = 2.4e-22
Identity = 65/215 (30.23%), Postives = 103/215 (47.91%), Query Frame = 0


Query: 4   VIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSF 63
           +I A+ +G G        H++    +R +DF      + G +  I +DP R A +  + +
Sbjct: 46  IITARHRGGG--------HKR---LYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHY 105

Query: 64  RHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRSIPEGAVVCNVEHHVGDR 123
                   +    +   G   G  +  G +  + +GN LP+  +P G  + N+E  +G  
Sbjct: 106 G-----DGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRG 165

Query: 124 GVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMVGQVAGGGRTEKPLLKAG 183
           G  AR +G  A +I+   +  ++ +KLPSG  +++   C A VGQV   G  +K L +AG
Sbjct: 166 GQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAG 225

Query: 184 NAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 215
           +          CW    P VRGV MNPV+HPHGGG
Sbjct: 226 S---------KCWLGKRPVVRGVVMNPVDHPHGGG 233

[Close]

BLAST of IVF0012297 vs. TAIR 10
Match: ATCG01310.1 (ribosomal protein L2 )

HSP 1 Score: 103.6 bits (257), Expect = 2.4e-22
Identity = 65/215 (30.23%), Postives = 103/215 (47.91%), Query Frame = 0


Query: 4   VIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSF 63
           +I A+ +G G        H++    +R +DF      + G +  I +DP R A +  + +
Sbjct: 46  IITARHRGGG--------HKR---LYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHY 105

Query: 64  RHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRSIPEGAVVCNVEHHVGDR 123
                   +    +   G   G  +  G +  + +GN LP+  +P G  + N+E  +G  
Sbjct: 106 G-----DGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRG 165

Query: 124 GVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMVGQVAGGGRTEKPLLKAG 183
           G  AR +G  A +I+   +  ++ +KLPSG  +++   C A VGQV   G  +K L +AG
Sbjct: 166 GQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAG 225

Query: 184 NAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 215
           +          CW    P VRGV MNPV+HPHGGG
Sbjct: 226 S---------KCWLGKRPVVRGVVMNPVDHPHGGG 233

The following BLAST results are available for this feature:

BLAST of IVF0012297 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P29766	2.1e-143	93.08	60S ribosomal protein L8 OS=Solanum lycopersicum OX=4081 GN=RPL8 PE=2 SV=1	[more]
Q42064	1.3e-142	93.02	60S ribosomal protein L8-3 OS=Arabidopsis thaliana OX=3702 GN=RPL8C PE=2 SV=2	[more]
P46286	5.7e-141	92.64	60S ribosomal protein L8-1 OS=Arabidopsis thaliana OX=3702 GN=RPL8A PE=1 SV=2	[more]
P25998	8.2e-140	91.15	60S ribosomal protein L8 OS=Nicotiana tabacum OX=4097 GN=RPL8 PE=2 SV=1	[more]
Q4PSL7	1.2e-127	84.17	60S ribosomal protein L8-2 OS=Arabidopsis thaliana OX=3702 GN=RPL8B PE=2 SV=3	[more]

BLAST of IVF0012297 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CL65	2.2e-148	100.00	60S ribosomal protein L8-3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3B1I8	2.2e-148	100.00	60S ribosomal protein L8-3 OS=Cucumis melo OX=3656 GN=LOC103485115 PE=3 SV=1	[more]
A0A0A0KKM7	6.5e-148	99.23	Ribosomal_L2_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G505...	[more]
A0A6J1BUD7	2.1e-146	96.92	60S ribosomal protein L8 OS=Momordica charantia OX=3673 GN=LOC111005865 PE=3 SV=...	[more]
W9T0U7	3.6e-146	96.92	60S ribosomal protein L8 OS=Morus notabilis OX=981085 GN=L484_026700 PE=3 SV=1	[more]

BLAST of IVF0012297 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008440805.1	4.65e-191	100.00	PREDICTED: 60S ribosomal protein L8-3 [Cucumis melo] >KAA0025686.1 60S ribosomal...	[more]
XP_004134871.1	1.89e-190	99.23	60S ribosomal protein L8-3 [Cucumis sativus] >XP_038883668.1 60S ribosomal prote...	[more]
XP_022133211.1	1.82e-188	96.92	60S ribosomal protein L8 [Momordica charantia]	[more]
XP_010113368.1	3.67e-188	96.92	60S ribosomal protein L8-3 [Morus notabilis] >EXC35375.1 60S ribosomal protein L...	[more]
XP_023873292.1	5.21e-188	96.92	60S ribosomal protein L8-3 [Quercus suber] >XP_023874783.1 60S ribosomal protein...	[more]

BLAST of IVF0012297 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G36130.1	9.6e-144	93.02	Ribosomal protein L2 family	[more]
AT2G18020.1	4.0e-142	92.64	Ribosomal protein L2 family	[more]
AT3G51190.1	8.7e-129	84.17	Ribosomal protein L2 family	[more]
ATCG00830.1	2.4e-22	30.23	ribosomal protein L2	[more]
ATCG01310.1	2.4e-22	30.23	ribosomal protein L2	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022669	Ribosomal protein L2, C-terminal	SMART	SM01382	Ribosomal_L2_C_2	coord: 96..231 e-value: 6.1E-68 score: 241.7
IPR022669	Ribosomal protein L2, C-terminal	PFAM	PF03947	Ribosomal_L2_C	coord: 98..224 e-value: 1.2E-44 score: 151.5
IPR002171	Ribosomal protein L2	SMART	SM01383	Ribosomal_L2_2	coord: 11..90 e-value: 9.0E-34 score: 128.2
IPR002171	Ribosomal protein L2	PIRSF	PIRSF002158	RPL2p_RPL2a_RPL8e_RPL2o	coord: 1..255 e-value: 3.1E-70 score: 234.5
IPR002171	Ribosomal protein L2	PANTHER	PTHR13691	RIBOSOMAL PROTEIN L2	coord: 1..260
IPR022666	Ribosomal Proteins L2, RNA binding domain	PFAM	PF00181	Ribosomal_L2	coord: 13..90 e-value: 3.7E-18 score: 65.3
None	No IPR available	GENE3D	2.40.50.140		coord: 1..86 e-value: 9.9E-41 score: 139.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 210..230
None	No IPR available	PANTHER	PTHR13691:SF48	60S RIBOSOMAL PROTEIN L8	coord: 1..260
IPR014726	Ribosomal protein L2, domain 3	GENE3D	4.10.950.10	Ribosomal protein L2, domain 3	coord: 170..247 e-value: 1.9E-43 score: 148.7
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 90..169 e-value: 2.6E-25 score: 90.1
IPR022671	Ribosomal protein L2, conserved site	PROSITE	PS00467	RIBOSOMAL_L2	coord: 197..208
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 99..246
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 1..97

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0012297.2	IVF0012297.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome