IVF0012292 (gene) Melon (IVF77) v1

Overview


Name	IVF0012292
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	60S ribosomal protein L6
Location	chr01: 30516417 .. 30518192 (-)
RNA-Seq Expression	IVF0012292
Synteny	IVF0012292

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGTTCCAAAAAAACCCTAATATATAAATGCCCTGACTTGTGAATTAGGGTTTCTGTCGTCCCTCGTCTTTCTCTCGTTGCCAAGAAGAGCACACACCAGGGAAACGTCAATGGCGCCCAAAACACCGCGAGTTACCAGAAACCCGGATCTCATCCGAGGAGTCGGCAAGTACTCGAGGTCTAAGATGTATCACAAGCGTGGTCTTTGGGCCATCAAGGCCAAAAACGGCGGCGTGTTCCCTCGTCACGATGCCAAGCCCAAAGCTGCTGTCCCAGCTGAGAAGCCGCCGAAGTTTTACCCTGCCGATGATGTGAAGAAGCCCCTTGTTAACAAGCGCAAGGCCAAGCTCACGAAGCTCAGGTATGATTGCTCCGCTTTTTTTTTTTTTTTCTTTCTGCATTGAGGTCTTTGATTATTTTCGAAATTTGTGGAATCCGGTCCTACGACGTTTTTGTAACTCAAACCTTTGTTCGGATTTTAGAGCTAGCATTACTCCTGGTACTGTGTTGATTATTCTTGCTGGGAGGTTCAAGGGGAAGAGAGTTGTGTTTTTGAAACAGCTGCCATCTGGGTTGCTCCTGGTTACTGGTGAGTTGGTTCCTTGTGAAATAATGGTGATTGTTTCTTGCTGTTATATTGTATTTATCCGGTTTTGATTGGAAGGTTATGTTTTAATCTGCTGTTATCTGTTGGGTCTCGTCTGTTTCTTTTCACTCATACGTAATTTTACCTGGTTTTGCTACCAACTCGAATCAGTTCTTCTATGTAATGTTTGCATTTTGGAAGTTTTAGTGTGATCTAGTTCGGTTTGCTGTATATTAAAATGCTAAATTTTTCCTTCACTTTATTGCATGCTTAGTTAAAATCACTACTGTCATTTTCAGTATCTGTAAAAAGTATTGTTGTAATCATTCATAATCAGTTTTAATAGTATGATAAAATGTATCCACAAGTGTACAACTGGACACTAGATTGAGTGATTTTGAACACTACAAATGTGATTTTAACTAGTTAAAATCACTCCTAAATATGCATATGCCGAAGATATAGTACGGAGTGCATCTGCTGAACAATTTATTCCGTTGCACACTTTCAAACTGAAATACATGAATGCTGTTCCTCATCTATTTATTGCAAAGTTGAATCTTTTTTATACTGAAGGTTAAATATTTATGCCTATAGGGCCTTTTAAGATTAATGGTGTTCCTCTGAGACGGGTGAATCAATCGTATGTGATTGCAACCTCCACCAAAGTTGACATCTCTGGAGTGAACTCCGAAAAGTTTGACGACAAGTACTTCTCCAAGGAAGCCCAGAAGAAGAAGAAGAAGAGTGAAGGGGAATTTTTCGAGGCAGAGAAAGAGGTAGGAATAGCTGGATTTACACCTCTGTCTTTCATTCTTTTCGTTGTTTACCTTTTTGCTGTCCTAATTTTTTGACTCCAACTTATTATTATAGGAGAAAAGTGCTCTCCCAGCTGAGAAGAAGGATGACCAGAAAGCCGTGGATACACCATTGATAAAGTCTATTGAGGCGGTTCCGGAGTTGAAGGCATACTTGGGAGCAAGATTTTCTCTCAAGGCTGGAATGAAACCTCATGAGCTTGTCTTTTAGATAAGGGATTTGGTTCTTTTTTCTTTTTTCTTTTTAATTTTTATTATCGTTTCTTCTTACAAAAATTATTACTTTGTTTTTATGTTCATCTGAACTTGGTATGACTTGTAGTAATTGCCTAGTCCCAAATTTTGATTCTAATAGAGATTCCATGTCTCGT

mRNA sequence

TTTGTTCCAAAAAAACCCTAATATATAAATGCCCTGACTTGTGAATTAGGGTTTCTGTCGTCCCTCGTCTTTCTCTCGTTGCCAAGAAGAGCACACACCAGGGAAACGTCAATGGCGCCCAAAACACCGCGAGTTACCAGAAACCCGGATCTCATCCGAGGAGTCGGCAAGTACTCGAGGTCTAAGATGTATCACAAGCGTGGTCTTTGGGCCATCAAGGCCAAAAACGGCGGCGTGTTCCCTCGTCACGATGCCAAGCCCAAAGCTGCTGTCCCAGCTGAGAAGCCGCCGAAGTTTTACCCTGCCGATGATGTGAAGAAGCCCCTTGTTAACAAGCGCAAGGCCAAGCTCACGAAGCTCAGAGCTAGCATTACTCCTGGTACTGTGTTGATTATTCTTGCTGGGAGGTTCAAGGGGAAGAGAGTTGTGTTTTTGAAACAGCTGCCATCTGGGTTGCTCCTGGTTACTGGGCCTTTTAAGATTAATGGTGTTCCTCTGAGACGGGTGAATCAATCGTATGTGATTGCAACCTCCACCAAAGTTGACATCTCTGGAGTGAACTCCGAAAAGTTTGACGACAAGTACTTCTCCAAGGAAGCCCAGAAGAAGAAGAAGAAGAGTGAAGGGGAATTTTTCGAGGCAGAGAAAGAGGAGAAAAGTGCTCTCCCAGCTGAGAAGAAGGATGACCAGAAAGCCGTGGATACACCATTGATAAAGTCTATTGAGGCGGTTCCGGAGTTGAAGGCATACTTGGGAGCAAGATTTTCTCTCAAGGCTGGAATGAAACCTCATGAGCTTGTCTTTTAGATAAGGGATTTGGTTCTTTTTTCTTTTTTCTTTTTAATTTTTATTATCGTTTCTTCTTACAAAAATTATTACTTTGTTTTTATGTTCATCTGAACTTGGTATGACTTGTAGTAATTGCCTAGTCCCAAATTTTGATTCTAATAGAGATTCCATGTCTCGT

Coding sequence (CDS)

ATGGCGCCCAAAACACCGCGAGTTACCAGAAACCCGGATCTCATCCGAGGAGTCGGCAAGTACTCGAGGTCTAAGATGTATCACAAGCGTGGTCTTTGGGCCATCAAGGCCAAAAACGGCGGCGTGTTCCCTCGTCACGATGCCAAGCCCAAAGCTGCTGTCCCAGCTGAGAAGCCGCCGAAGTTTTACCCTGCCGATGATGTGAAGAAGCCCCTTGTTAACAAGCGCAAGGCCAAGCTCACGAAGCTCAGAGCTAGCATTACTCCTGGTACTGTGTTGATTATTCTTGCTGGGAGGTTCAAGGGGAAGAGAGTTGTGTTTTTGAAACAGCTGCCATCTGGGTTGCTCCTGGTTACTGGGCCTTTTAAGATTAATGGTGTTCCTCTGAGACGGGTGAATCAATCGTATGTGATTGCAACCTCCACCAAAGTTGACATCTCTGGAGTGAACTCCGAAAAGTTTGACGACAAGTACTTCTCCAAGGAAGCCCAGAAGAAGAAGAAGAAGAGTGAAGGGGAATTTTTCGAGGCAGAGAAAGAGGAGAAAAGTGCTCTCCCAGCTGAGAAGAAGGATGACCAGAAAGCCGTGGATACACCATTGATAAAGTCTATTGAGGCGGTTCCGGAGTTGAAGGCATACTTGGGAGCAAGATTTTCTCTCAAGGCTGGAATGAAACCTCATGAGCTTGTCTTTTAG

Protein sequence

MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAAVPAEKPPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKSEGEFFEAEKEEKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF

Homology

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BLAST of IVF0012292 vs. ExPASy Swiss-Prot
Match: Q9FZ76 (60S ribosomal protein L6-1 OS=Arabidopsis thaliana OX=3702 GN=RPL6A PE=2 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 2.2e-104
Identity = 194/230 (84.35%), Postives = 208/230 (90.43%), Query Frame = 0


Query: 2   APKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAAVPAEKPPK 61
           A +TP+V RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+PK   P EKP K
Sbjct: 4   AKRTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAQPKVDAPVEKPAK 63

Query: 62  FYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGP 121
           FYPA+DVKKPLVN+RK K TKL+ASITPGTVLIILAGRFKGKRVVFLKQL SGLLLVTGP
Sbjct: 64  FYPAEDVKKPLVNRRKPKPTKLKASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGP 123

Query: 122 FKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKSEGEFFEAEKEE 181
           FKINGVPLRRVNQ+YVI TSTK+DISGVN+EKFDDKYF K A+KKKKK+EGEFFEAEKEE
Sbjct: 124 FKINGVPLRRVNQAYVIGTSTKIDISGVNTEKFDDKYFGKVAEKKKKKTEGEFFEAEKEE 183

Query: 182 KSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 232
           K  +P EKK+DQK VD  LIKSIEAVPELK YLGARFSL  GMKPHELVF
Sbjct: 184 KKEIPQEKKEDQKTVDAALIKSIEAVPELKVYLGARFSLSQGMKPHELVF 233

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BLAST of IVF0012292 vs. ExPASy Swiss-Prot
Match: Q9C9C5 (60S ribosomal protein L6-3 OS=Arabidopsis thaliana OX=3702 GN=RPL6C PE=2 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 4.2e-103
Identity = 194/228 (85.09%), Postives = 205/228 (89.91%), Query Frame = 0


Query: 4   KTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAAVPAEKPPKFY 63
           +TP+V RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K   P EKPPKFY
Sbjct: 6   RTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PA+DVKKPL N+R AK TKLRASITPGTVLIILAGRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 INGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKSEGEFFEAEKEEKS 183
           INGVPLRRVNQ+YVI TSTKVDISGV  +KFDDKYF K A+KKKKK+EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 232
            +P  KKDDQKAVD  LIK+IEAVPELK YLGARFSLK GMKPHELVF
Sbjct: 186 EIPQVKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

[Close]

BLAST of IVF0012292 vs. ExPASy Swiss-Prot
Match: Q9C9C6 (60S ribosomal protein L6-2 OS=Arabidopsis thaliana OX=3702 GN=RPL6B PE=2 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 1.3e-101
Identity = 192/228 (84.21%), Postives = 203/228 (89.04%), Query Frame = 0


Query: 4   KTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAAVPAEKPPKFY 63
           +T +V RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K   P EKPPKFY
Sbjct: 6   RTAKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PA+DVKKPL N+R AK  KLRASITPGTVLIILAGRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPAKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 INGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKSEGEFFEAEKEEKS 183
           INGVPLRRVNQ+YVI TSTKVDISGV  +KFDDKYF K A+KKKKK+EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 232
            +P  KKDDQKAVD  LIK+IEAVPELK YLGARFSLK GMKPHELVF
Sbjct: 186 EIPQGKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

[Close]

BLAST of IVF0012292 vs. ExPASy Swiss-Prot
Match: P34091 (60S ribosomal protein L6 OS=Mesembryanthemum crystallinum OX=3544 GN=RPL6 PE=2 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 2.3e-101
Identity = 189/228 (82.89%), Postives = 205/228 (89.91%), Query Frame = 0


Query: 4   KTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAAVPAEKPPKFY 63
           + P V+RNP+L+RG+GKYSRSKMYHKRGLWAIKAKNGGVFP+H  K   +   EKPPKFY
Sbjct: 7   RKPHVSRNPELVRGIGKYSRSKMYHKRGLWAIKAKNGGVFPKHAPKSADSKAVEKPPKFY 66

Query: 64  PADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PADDVKKPL+NKRK K TKLRASITPGTVLIILAGRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 67  PADDVKKPLINKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGPFK 126

Query: 124 INGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKSEGEFFEAEKEEKS 183
           +NGVPLRRVNQ+YVIATSTKVDISGVN EKFDDKYF K+A+KK KK EGEFFEAEK+E +
Sbjct: 127 VNGVPLRRVNQAYVIATSTKVDISGVNVEKFDDKYFGKKAEKKNKKGEGEFFEAEKKEVN 186

Query: 184 ALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 232
            LP EKKDDQKAVD  L+K+IE VPELKAYLGARFSLKAGMKPHELVF
Sbjct: 187 VLPQEKKDDQKAVDVALLKAIEGVPELKAYLGARFSLKAGMKPHELVF 234

[Close]

BLAST of IVF0012292 vs. ExPASy Swiss-Prot
Match: Q2YGT9 (60S ribosomal protein L6 OS=Sus scrofa OX=9823 GN=RPL6 PE=1 SV=3)

HSP 1 Score: 194.5 bits (493), Expect = 1.3e-48
Identity = 118/250 (47.20%), Postives = 159/250 (63.60%), Query Frame = 0


Query: 6   PRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAAVPA--------- 65
           P  +RNP L+RG+G+YSRS MY ++ L+  K K      + + K K  V A         
Sbjct: 38  PHCSRNPVLVRGIGRYSRSAMYSRKALY--KRKYSAAKSKVEKKKKVRVLATVTKPVGGD 97

Query: 66  ----------EKPPKFYPADDVKKPLVNKRKAKLT----KLRASITPGTVLIILAGRFKG 125
                      K P++YP +DV + L++  K   +    KLRASITPGT+LIIL GR +G
Sbjct: 98  KNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSKHVRKLRASITPGTILIILTGRHRG 157

Query: 126 KRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVN-SEKFDDKYFSK 185
           KRV+FLKQL SGLLLVTGP  +N VPLRR +Q +VIATSTK+DISGV   E   D YF K
Sbjct: 158 KRVIFLKQLSSGLLLVTGPLSLNRVPLRRTHQKFVIATSTKIDISGVKIPEHLTDAYFKK 217

Query: 186 EAQKKKKKSEGEFFEAEKEEKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLK 232
           +  +K +  EGE F+ EK EK  +  ++K DQKAVD+ +++ I+AVP+L+ YL + F+L 
Sbjct: 218 KKLRKPRHQEGEIFDTEK-EKYEISEQRKVDQKAVDSQILRRIKAVPQLQGYLRSVFALT 277

[Close]

BLAST of IVF0012292 vs. ExPASy TrEMBL
Match: A0A1S3CEA6 (60S ribosomal protein L6 OS=Cucumis melo OX=3656 GN=LOC103499900 PE=3 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 2.7e-121
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0


Query: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAAVPAEKPP 60
           MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAAVPAEKPP
Sbjct: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAAVPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKSEGEFFEAEKE 180
           PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKSEGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKSEGEFFEAEKE 180

Query: 181 EKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 232
           EKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF
Sbjct: 181 EKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 231

[Close]

BLAST of IVF0012292 vs. ExPASy TrEMBL
Match: A0A0A0K9V0 (60S ribosomal protein L6 OS=Cucumis sativus OX=3659 GN=Csa_7G428940 PE=3 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 6.6e-120
Identity = 228/231 (98.70%), Postives = 229/231 (99.13%), Query Frame = 0


Query: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAAVPAEKPP 60
           MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PKAA PAEKPP
Sbjct: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKAAAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKSEGEFFEAEKE 180
           PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKK EGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 232
           EKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF
Sbjct: 181 EKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 231

[Close]

BLAST of IVF0012292 vs. ExPASy TrEMBL
Match: A0A6J1JS55 (60S ribosomal protein L6-1-like OS=Cucurbita maxima OX=3661 GN=LOC111488421 PE=3 SV=1)

HSP 1 Score: 424.5 bits (1090), Expect = 2.9e-115
Identity = 219/231 (94.81%), Postives = 223/231 (96.54%), Query Frame = 0


Query: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAAVPAEKPP 60
           MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKA  PAEK P
Sbjct: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKSP 60

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKA+LTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKSEGEFFEAEKE 180
           PFKINGVPLRRVNQSY IATSTKVDISGVN+EKFDDKYFSKE QKKKKK EGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 232
           EKSALPA++KDDQKAVDTPLIKSIE VPELKAYL ARFSLKAGMKPHELVF
Sbjct: 181 EKSALPADRKDDQKAVDTPLIKSIEGVPELKAYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of IVF0012292 vs. ExPASy TrEMBL
Match: A0A6J1H5C5 (60S ribosomal protein L6 OS=Cucurbita moschata OX=3662 GN=LOC111460710 PE=3 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 2.4e-114
Identity = 217/231 (93.94%), Postives = 223/231 (96.54%), Query Frame = 0


Query: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAAVPAEKPP 60
           MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PKA    EKPP
Sbjct: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKADAAVEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKA+LTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKSEGEFFEAEKE 180
           PFKINGVPLRRVNQSYVIATSTKV+ISGVN+EKFDDKYFSKE QKKKKKSEGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYVIATSTKVEISGVNTEKFDDKYFSKEVQKKKKKSEGEFFEAEKE 180

Query: 181 EKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 232
           EKSALPA+KKDDQKAVDTPLIKSIE VPELKAYL ARFSLK+GMKPHEL F
Sbjct: 181 EKSALPADKKDDQKAVDTPLIKSIEGVPELKAYLAARFSLKSGMKPHELAF 231

[Close]

BLAST of IVF0012292 vs. ExPASy TrEMBL
Match: A0A6J1KWW3 (60S ribosomal protein L6 OS=Cucurbita maxima OX=3661 GN=LOC111497875 PE=3 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 7.1e-114
Identity = 216/231 (93.51%), Postives = 222/231 (96.10%), Query Frame = 0


Query: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAAVPAEKPP 60
           MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PKA    EKPP
Sbjct: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKADAAVEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKA+LTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKSEGEFFEAEKE 180
           PFKINGVPLRRVNQSYVIATSTKV+ SGVN+EKFDDKYFSKE QKKKKKSEGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYVIATSTKVEFSGVNTEKFDDKYFSKEVQKKKKKSEGEFFEAEKE 180

Query: 181 EKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 232
           EKSALPA+KKDDQKAVDTPLIKSIE VPELKAYL ARFSLK+GMKPHEL F
Sbjct: 181 EKSALPADKKDDQKAVDTPLIKSIEGVPELKAYLAARFSLKSGMKPHELTF 231

[Close]

BLAST of IVF0012292 vs. NCBI nr
Match: XP_008461261.1 (PREDICTED: 60S ribosomal protein L6-1 [Cucumis melo])

HSP 1 Score: 442 bits (1137), Expect = 3.35e-156
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0


Query: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAAVPAEKPP 60
           MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAAVPAEKPP
Sbjct: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAAVPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKSEGEFFEAEKE 180
           PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKSEGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKSEGEFFEAEKE 180

Query: 181 EKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 231
           EKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF
Sbjct: 181 EKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 231

[Close]

BLAST of IVF0012292 vs. NCBI nr
Match: XP_011659463.1 (60S ribosomal protein L6-1 [Cucumis sativus] >KGN45157.1 hypothetical protein Csa_015877 [Cucumis sativus])

HSP 1 Score: 437 bits (1125), Expect = 2.26e-154
Identity = 228/231 (98.70%), Postives = 229/231 (99.13%), Query Frame = 0


Query: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAAVPAEKPP 60
           MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PKAA PAEKPP
Sbjct: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKAAAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKSEGEFFEAEKE 180
           PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKK EGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 231
           EKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF
Sbjct: 181 EKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 231

[Close]

BLAST of IVF0012292 vs. NCBI nr
Match: XP_038896966.1 (60S ribosomal protein L6-1-like [Benincasa hispida])

HSP 1 Score: 428 bits (1100), Expect = 1.46e-150
Identity = 222/231 (96.10%), Postives = 224/231 (96.97%), Query Frame = 0


Query: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAAVPAEKPP 60
           MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKA  P EKPP
Sbjct: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPTEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRK KLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKPKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKSEGEFFEAEKE 180
           PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKE QKKKKK EGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 231
           EKS LPA+KKDDQ+AVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF
Sbjct: 181 EKSGLPADKKDDQRAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 231

[Close]

BLAST of IVF0012292 vs. NCBI nr
Match: XP_022991926.1 (60S ribosomal protein L6-1-like [Cucurbita maxima])

HSP 1 Score: 422 bits (1085), Expect = 2.83e-148
Identity = 219/231 (94.81%), Postives = 223/231 (96.54%), Query Frame = 0


Query: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAAVPAEKPP 60
           MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKA  PAEK P
Sbjct: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKSP 60

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKA+LTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKSEGEFFEAEKE 180
           PFKINGVPLRRVNQSY IATSTKVDISGVN+EKFDDKYFSKE QKKKKK EGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 231
           EKSALPA++KDDQKAVDTPLIKSIE VPELKAYL ARFSLKAGMKPHELVF
Sbjct: 181 EKSALPADRKDDQKAVDTPLIKSIEGVPELKAYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of IVF0012292 vs. NCBI nr
Match: XP_022959727.1 (60S ribosomal protein L6-1-like [Cucurbita moschata] >XP_023513505.1 60S ribosomal protein L6-1-like [Cucurbita pepo subsp. pepo] >KAG6593324.1 60S ribosomal protein L6, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025671.1 60S ribosomal protein L6 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 419 bits (1077), Expect = 4.69e-147
Identity = 217/231 (93.94%), Postives = 223/231 (96.54%), Query Frame = 0


Query: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAAVPAEKPP 60
           MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PKA    EKPP
Sbjct: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKADAAVEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKA+LTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKSEGEFFEAEKE 180
           PFKINGVPLRRVNQSYVIATSTKV+ISGVN+EKFDDKYFSKE QKKKKKSEGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYVIATSTKVEISGVNTEKFDDKYFSKEVQKKKKKSEGEFFEAEKE 180

Query: 181 EKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 231
           EKSALPA+KKDDQKAVDTPLIKSIE VPELKAYL ARFSLK+GMKPHEL F
Sbjct: 181 EKSALPADKKDDQKAVDTPLIKSIEGVPELKAYLAARFSLKSGMKPHELAF 231

[Close]

BLAST of IVF0012292 vs. TAIR 10
Match: AT1G18540.1 (Ribosomal protein L6 family protein )

HSP 1 Score: 379.8 bits (974), Expect = 1.6e-105
Identity = 194/230 (84.35%), Postives = 208/230 (90.43%), Query Frame = 0


Query: 2   APKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAAVPAEKPPK 61
           A +TP+V RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+PK   P EKP K
Sbjct: 4   AKRTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAQPKVDAPVEKPAK 63

Query: 62  FYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGP 121
           FYPA+DVKKPLVN+RK K TKL+ASITPGTVLIILAGRFKGKRVVFLKQL SGLLLVTGP
Sbjct: 64  FYPAEDVKKPLVNRRKPKPTKLKASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGP 123

Query: 122 FKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKSEGEFFEAEKEE 181
           FKINGVPLRRVNQ+YVI TSTK+DISGVN+EKFDDKYF K A+KKKKK+EGEFFEAEKEE
Sbjct: 124 FKINGVPLRRVNQAYVIGTSTKIDISGVNTEKFDDKYFGKVAEKKKKKTEGEFFEAEKEE 183

Query: 182 KSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 232
           K  +P EKK+DQK VD  LIKSIEAVPELK YLGARFSL  GMKPHELVF
Sbjct: 184 KKEIPQEKKEDQKTVDAALIKSIEAVPELKVYLGARFSLSQGMKPHELVF 233

[Close]

BLAST of IVF0012292 vs. TAIR 10
Match: AT1G74050.1 (Ribosomal protein L6 family protein )

HSP 1 Score: 375.6 bits (963), Expect = 3.0e-104
Identity = 194/228 (85.09%), Postives = 205/228 (89.91%), Query Frame = 0


Query: 4   KTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAAVPAEKPPKFY 63
           +TP+V RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K   P EKPPKFY
Sbjct: 6   RTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PA+DVKKPL N+R AK TKLRASITPGTVLIILAGRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 INGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKSEGEFFEAEKEEKS 183
           INGVPLRRVNQ+YVI TSTKVDISGV  +KFDDKYF K A+KKKKK+EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 232
            +P  KKDDQKAVD  LIK+IEAVPELK YLGARFSLK GMKPHELVF
Sbjct: 186 EIPQVKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

[Close]

BLAST of IVF0012292 vs. TAIR 10
Match: AT1G74060.1 (Ribosomal protein L6 family protein )

HSP 1 Score: 370.5 bits (950), Expect = 9.5e-103
Identity = 192/228 (84.21%), Postives = 203/228 (89.04%), Query Frame = 0


Query: 4   KTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAAVPAEKPPKFY 63
           +T +V RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K   P EKPPKFY
Sbjct: 6   RTAKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PA+DVKKPL N+R AK  KLRASITPGTVLIILAGRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPAKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 INGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKSEGEFFEAEKEEKS 183
           INGVPLRRVNQ+YVI TSTKVDISGV  +KFDDKYF K A+KKKKK+EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 232
            +P  KKDDQKAVD  LIK+IEAVPELK YLGARFSLK GMKPHELVF
Sbjct: 186 EIPQGKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

The following BLAST results are available for this feature:

BLAST of IVF0012292 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FZ76	2.2e-104	84.35	60S ribosomal protein L6-1 OS=Arabidopsis thaliana OX=3702 GN=RPL6A PE=2 SV=1	[more]
Q9C9C5	4.2e-103	85.09	60S ribosomal protein L6-3 OS=Arabidopsis thaliana OX=3702 GN=RPL6C PE=2 SV=1	[more]
Q9C9C6	1.3e-101	84.21	60S ribosomal protein L6-2 OS=Arabidopsis thaliana OX=3702 GN=RPL6B PE=2 SV=1	[more]
P34091	2.3e-101	82.89	60S ribosomal protein L6 OS=Mesembryanthemum crystallinum OX=3544 GN=RPL6 PE=2 S...	[more]
Q2YGT9	1.3e-48	47.20	60S ribosomal protein L6 OS=Sus scrofa OX=9823 GN=RPL6 PE=1 SV=3	[more]

BLAST of IVF0012292 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CEA6	2.7e-121	100.00	60S ribosomal protein L6 OS=Cucumis melo OX=3656 GN=LOC103499900 PE=3 SV=1	[more]
A0A0A0K9V0	6.6e-120	98.70	60S ribosomal protein L6 OS=Cucumis sativus OX=3659 GN=Csa_7G428940 PE=3 SV=1	[more]
A0A6J1JS55	2.9e-115	94.81	60S ribosomal protein L6-1-like OS=Cucurbita maxima OX=3661 GN=LOC111488421 PE=3...	[more]
A0A6J1H5C5	2.4e-114	93.94	60S ribosomal protein L6 OS=Cucurbita moschata OX=3662 GN=LOC111460710 PE=3 SV=1	[more]
A0A6J1KWW3	7.1e-114	93.51	60S ribosomal protein L6 OS=Cucurbita maxima OX=3661 GN=LOC111497875 PE=3 SV=1	[more]

BLAST of IVF0012292 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008461261.1	3.35e-156	100.00	PREDICTED: 60S ribosomal protein L6-1 [Cucumis melo]	[more]
XP_011659463.1	2.26e-154	98.70	60S ribosomal protein L6-1 [Cucumis sativus] >KGN45157.1 hypothetical protein Cs...	[more]
XP_038896966.1	1.46e-150	96.10	60S ribosomal protein L6-1-like [Benincasa hispida]	[more]
XP_022991926.1	2.83e-148	94.81	60S ribosomal protein L6-1-like [Cucurbita maxima]	[more]
XP_022959727.1	4.69e-147	93.94	60S ribosomal protein L6-1-like [Cucurbita moschata] >XP_023513505.1 60S ribosom...	[more]

BLAST of IVF0012292 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G18540.1	1.6e-105	84.35	Ribosomal protein L6 family protein	[more]
AT1G74050.1	3.0e-104	85.09	Ribosomal protein L6 family protein	[more]
AT1G74060.1	9.5e-103	84.21	Ribosomal protein L6 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 160..180
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 168..195
None	No IPR available	PANTHER	PTHR10715:SF9	60S RIBOSOMAL PROTEIN L6	coord: 1..231
IPR005568	Ribosomal protein L6, N-terminal	PFAM	PF03868	Ribosomal_L6e_N	coord: 5..59 e-value: 3.8E-16 score: 59.1
IPR000915	60S ribosomal protein L6E	PFAM	PF01159	Ribosomal_L6e	coord: 124..231 e-value: 1.7E-40 score: 138.1
IPR000915	60S ribosomal protein L6E	PANTHER	PTHR10715	60S RIBOSOMAL PROTEIN L6	coord: 1..231
IPR000915	60S ribosomal protein L6E	PROSITE	PS01170	RIBOSOMAL_L6E	coord: 125..143
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 85..169 e-value: 1.1E-17 score: 65.7
IPR041997	Ribosomal Protein L6, KOW domain	CDD	cd13156	KOW_RPL6	coord: 79..231 e-value: 5.14972E-81 score: 237.061
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 85..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0012292.2	IVF0012292.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0000027	ribosomal large subunit assembly
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome