Homology
BLAST of IVF0012244 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 511.9 bits (1317), Expect = 1.9e-143
Identity = 370/1288 (28.73%), Postives = 605/1288 (46.97%), Query Frame = 0
Query: 70 QKDQVIDSEKYAKDTKTVRGHLLNHMSDPMFDLFVVQKSAKDIWSTLESRYGGDDAGQKK 129
+K + +E +A + + H+SD + + + + +A+ IW+ LES Y K
Sbjct: 42 KKPDTMKAEDWADLDERAASAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKL 101
Query: 130 YVVGKWLQFQMTDDKPVVEQIHEYENLV---------------ANVLLEKFPPSWNDYRN 189
Y+ + M++ + ++ + L+ A +LL P S+++
Sbjct: 102 YLKKQLYALHMSEGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLAT 161
Query: 190 HLKHKKKDLKLQELISHMRTEEANRLKDKLACKNLNSVNANLVESSFVNRDRTKQEKGHK 249
+ H K ++L+++ S A L +K+ K N A + E + R+ G
Sbjct: 162 TILHGKTTIELKDVTS------ALLLNEKMRKKPENQGQALITEGRGRSYQRSSNNYGRS 221
Query: 250 GKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQC-NQRKGR----PSQKPTPQAHLAE 309
G + + + K + CY C + GH C N RKG+ + A + +
Sbjct: 222 GARGKSK------NRSKSRVRNCYNCNQPGHFKRDCPNPRKGKGETSGQKNDDNTAAMVQ 281
Query: 310 QDSEIIAAIVE----ANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSA 369
+ ++ I E +L +++W++DT AS H R+L Y D V MGN++
Sbjct: 282 NNDNVVLFINEEEECMHLSGPESEWVVDTAASHHATPVRDLFCRYV-AGDFGTVKMGNTS 341
Query: 370 TAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVFGSLLNRAGLKIVLEGDKVVFTKN 429
+ + G G + +K G TL L +V +VP LR NL+ G L+R G + K TK
Sbjct: 342 YSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMNLISGIALDRDGYESYFANQKWRLTKG 401
Query: 430 GDFVGKGYLSNGLFVLNTISMNENASSSAYLIESANLWHGRLGHVNFASIRKLKDLRLIN 489
+ KG L+ N + + ++A S +LWH R+GH++ ++ L LI+
Sbjct: 402 SLVIAKGVARGTLYRTNA-EICQGELNAAQDEISVDLWHKRMGHMSEKGLQILAKKSLIS 461
Query: 490 TSETHETGKCPVCIESKFHKKPFKPVEYKTTELLELIHSNLADFRTTTSRGGKNYYVSFV 549
++ C C+ K H+ F+ + +L+L++S++ S GG Y+V+F+
Sbjct: 462 YAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFI 521
Query: 550 DDYSRFTKIYLIKTKNEAVTMFVKFKAESENQLEKRIKRLRSDRG--------------- 609
DD SR +Y++KTK++ +F KF A E + +++KRLRSD G
Sbjct: 522 DDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSH 581
Query: 610 ------------------ERKNRTLKEMMNAMLLSSGLSDNMWREAVLSACFILNRIPHK 669
ER NRT+ E + +ML + L + W EAV +AC+++NR P
Sbjct: 582 GIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSV 641
Query: 670 RLD-KTPYELWKGHAPNLSYLKVWGCLAKVPFPALKKTTVGPKTFDCIFIGMHDPEIVSE 729
L + P +W + S+LKV+GC A P ++T + K+ CIFIG D E
Sbjct: 642 PLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYR 701
Query: 730 --TPVSETV----DTPNLSCELELRRSKRQRTEKSFGPDFLST----------------- 789
PV + V D E+ ++ + P+F++
Sbjct: 702 LWDPVKKKVIRSRDVVFRESEVRTAADMSEKVKNGIIPNFVTIPSTSNNPTSAESTTDEV 761
Query: 790 --------FIVERRDEID-------------------------------CKFTNLYLI-- 849
++E+ +++D T LI
Sbjct: 762 SEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQPLRRSERPRVESRRYPSTEYVLISD 821
Query: 850 DEDPKTYQEVLNFVDSSMWKEAIKSKLDLLVMNHTWELVDLPMGNKPIRCKWIFKRKTKP 909
D +P++ +EVL+ + + +A++ +++ L N T++LV+LP G +P++CKW+FK K
Sbjct: 822 DREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDG 881
Query: 910 NGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAF 969
+ + RYKARLVV G+ QK+G+D+ + +SPV K+T+IR +++LAA +L + Q+DVKTAF
Sbjct: 882 DCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAF 941
Query: 970 LNGDLEEEIYMTQLEDFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINS 1029
L+GDLEEEIYM Q E F+++G+++ VCKL KSLYGLKQAP+QWY KF++ + + +
Sbjct: 942 LHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTY 1001
Query: 1030 SDTCVYSKMVGA-DCILICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDMGEADVILGV 1089
SD CVY K + I++ LYVDDMLI G + LI K LS F+MKD+G A ILG+
Sbjct: 1002 SDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGM 1061
Query: 1090 KIRKNKTS--LSLCQSHYVEKILKKFDSFDVSPVRTPFDA-------------------- 1145
KI + +TS L L Q Y+E++L++F+ + PV TP
Sbjct: 1062 KIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMA 1121
BLAST of IVF0012244 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 343.6 bits (880), Expect = 8.8e-93
Identity = 337/1385 (24.33%), Postives = 559/1385 (40.36%), Query Frame = 0
Query: 65 VTDQVQKDQVIDSEKYAKDTKTVRGHLLNHMSDPMFDLFVVQKSAKDIWSTLESRYGGDD 124
V D + ++V DS K A+ + + ++ ++SD + +A+ I L++ Y
Sbjct: 35 VVDGLMPNEVDDSWKKAE--RCAKSTIIEYLSDSFLNFATSDITARQILENLDAVYERKS 94
Query: 125 AGQKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLLEKFPPSWNDYRNHLKHKKKD-- 184
+ + + L +++ + ++ H ++ L++ +L D +HL
Sbjct: 95 LASQLALRKRLLSLKLSSEMSLLSHFHIFDELISELLAAGAKIEEMDKISHLLITLPSCY 154
Query: 185 ---LKLQELISHMRTEEA---NRLKD-KLACKNLNSVNANLVESSFVNRDRTKQEKGHKG 244
+ E +S A NRL D ++ KN ++ + V ++ V+ + K +
Sbjct: 155 DGIITAIETLSEENLTLAFVKNRLLDQEIKIKNDHNDTSKKVMNAIVHNNNNTY-KNNLF 214
Query: 245 KNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQC--------NQRKGRPSQKPTPQAHL 304
KN + K G K K+ C+ CG+EGH C N+ K Q T +H
Sbjct: 215 KNRVTKPKKIFKGN-SKYKVKCHHCGREGHIKKDCFHYKRILNNKNKENEKQVQTATSH- 274
Query: 305 AEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATA 364
+ V + + ++LD+GAS H + L D + + +
Sbjct: 275 ---GIAFMVKEVNNTSVMDNCGFVLDSGASDHLINDESLYTDSVEVVPPLKIAVAKQGEF 334
Query: 365 GVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVFGSLLNRAGLKIVLEGDKVVFTKNGD 424
+ + I++L + ++L +VL+ NL+ L AG+ I + V +KNG
Sbjct: 335 -IYATKRGIVRLRNDHEITLEDVLFCKEAAGNLMSVKRLQEAGMSIEFDKSGVTISKNGL 394
Query: 425 FVGKGY-LSNGLFVLNTISMNENASSSAYLIESANLWHGRLGHVNFASIRKLK------D 484
V K + N + V+N + + NA + LWH R GH++ + ++K D
Sbjct: 395 MVVKNSGMLNNVPVINFQAYSINAKHK----NNFRLWHERFGHISDGKLLEIKRKNMFSD 454
Query: 485 LRLINTSETHETGKCPVCIESKFHKKPFKPVEYKT--TELLELIHSNLADFRTTTSRGGK 544
L+N E C C+ K + PFK ++ KT L ++HS++ T + K
Sbjct: 455 QSLLNNLEL-SCEICEPCLNGKQARLPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLDDK 514
Query: 545 NYYVSFVDDYSRFTKIYLIKTKNEAVTMFVKFKAESENQLEKRIKRLRSDRG-------- 604
NY+V FVD ++ + YLIK K++ +MF F A+SE ++ L D G
Sbjct: 515 NYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEM 574
Query: 605 -------------------------ERKNRTLKEMMNAMLLSSGLSDNMWREAVLSACFI 664
ER RT+ E M+ + L + W EAVL+A ++
Sbjct: 575 RQFCVKKGISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYL 634
Query: 665 LNRIPHKRL---DKTPYELWKGHAPNLSYLKVWGCLAKVPFPALKKTTVGPKTFDCIFIG 724
+NRIP + L KTPYE+W P L +L+V+G V K+ K+F IF+G
Sbjct: 635 INRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFGATVYVHIKN-KQGKFDDKSFKSIFVG 694
Query: 725 MHDPE------------------IVSETPV------------------SETVDTPNLS-- 784
++P +V ET + SE + PN S
Sbjct: 695 -YEPNGFKLWDAVNEKFIVARDVVVDETNMVNSRAVKFETVFLKDSKESENKNFPNDSRK 754
Query: 785 ------------CE-LELRRSKRQRTEKSFGPDFLSTFIVERRDEI----------DCKF 844
C+ ++ + ++ K+F D E +E D K
Sbjct: 755 IIQTEFPNESKECDNIQFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKE 814
Query: 845 TNLYLIDED--------------------------------------------------- 904
+N Y ++E
Sbjct: 815 SNKYFLNESKKRKRDDHLNESKGSGNPNESRESETAEHLKEIGIDNPTKNDGIEIINRRS 874
Query: 905 --------------------------------PKTYQEVLNFVDSSMWKEAIKSKLDLLV 964
P ++ E+ D S W+EAI ++L+
Sbjct: 875 ERLKTKPQISYNEEDNSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNAHK 934
Query: 965 MNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPV 1024
+N+TW + P + +W+F K G RYKARLV G+TQK +DY +T++PV
Sbjct: 935 INNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPV 994
Query: 1025 TKITTIRALIALAAIHNLLIHQMDVKTAFLNGDLEEEIYMTQLEDFKISGQENKVCKLRK 1084
+I++ R +++L +NL +HQMDVKTAFLNG L+EEIYM + IS + VCKL K
Sbjct: 995 ARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQG--ISCNSDNVCKLNK 1054
Query: 1085 SLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVG--ADCILICLYVDDMLIFGT 1144
++YGLKQA + W+E F L F +S D C+Y G + I + LYVDD++I
Sbjct: 1055 AIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATG 1114
Query: 1145 NMELITDTKFFLSSHFEMKDMGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSFDVS 1157
+M + + K +L F M D+ E +G++I + + L QS YV+KIL KF+ + +
Sbjct: 1115 DMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCN 1174
BLAST of IVF0012244 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 327.4 bits (838), Expect = 6.5e-88
Identity = 344/1480 (23.24%), Postives = 577/1480 (38.99%), Query Frame = 0
Query: 1 MTLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPL 60
+ +S + L TNY WS+++ F+ E+ L D T+ PP T T + P +
Sbjct: 18 VNMSNVTKLTSTNYLMWSRQVHALFDGYELAGFL--DGSTTMPPATIGTDAAPRVNP--- 77
Query: 61 TTVAVTDQVQKDQVIDSEKYAKDTKTVRGHLLNHMSDPMFDLFVVQKSAKDIWSTLESRY 120
D ++ + K + +L +S + +A IW TL Y
Sbjct: 78 ---------------DYTRWKRQDKLIYSAVLGAISMSVQPAVSRATTAAQIWETLRKIY 137
Query: 121 GGDDAG---QKKYVVGKWLQFQMTDD-----------------KPV-----VEQI----- 180
G Q + + +W + T D KP+ VE++
Sbjct: 138 ANPSYGHVTQLRTQLKQWTKGTKTIDDYMQGLVTRFDQLALLGKPMDHDEQVERVLENLP 197
Query: 181 HEYENLVANVLLEKFPPSWND-YRNHLKHKKKDLKLQELISHMRTEEANRLKDKLACKNL 240
EY+ ++ + + PP+ + + L H+ K L + T A ++ N
Sbjct: 198 EEYKPVIDQIAAKDTPPTLTEIHERLLNHESKILAVSSATVIPITANAVSHRNTTTTNNN 257
Query: 241 NSVNANLVESSFVNRDRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQ 300
N+ N N + + NR+ K + ++ F Q K C +CG +GH + +
Sbjct: 258 NNGNRN---NRYDNRNNNNNSKPWQQSST---NFHPNNNQSKPYLGKCQICGVQGHSAKR 317
Query: 301 CNQRKG-----RPSQKPTPQAHLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNR 360
C+Q + Q P+P + + + + +N +W+LD+GA+ H ++
Sbjct: 318 CSQLQHFLSSVNSQQPPSPFTPWQPRANLALGSPYSSN------NWLLDSGATHHITSDF 377
Query: 361 ELLHDYEDTADGECVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLV-FG 420
L ++ G+ V + + +T + G L T + L+L N+LYVP++ +NL+
Sbjct: 378 NNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLS-TKSRPLNLHNILYVPNIHKNLISVY 437
Query: 421 SLLNRAGLKIVL--EGDKVVFTKNGDFVGKGYLSNGLF---VLNTISMNENASSSAYLIE 480
L N G+ + +V G + +G + L+ + ++ ++ AS S+
Sbjct: 438 RLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQPVSLFASPSSKATH 497
Query: 481 SANLWHGRLGHVNFASIRK-LKDLRLINTSETHETGKCPVCIESKFHKKPFKPVEYKTTE 540
S+ WH RLGH + + + + L + +H+ C C+ +K +K PF +T
Sbjct: 498 SS--WHARLGHPAPSILNSVISNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTINSTR 557
Query: 541 LLELIHSNLADFRTTTSRGGKNYYVSFVDDYSRFTKIYLIKTKNEAVTMFVKFKAESENQ 600
LE I+S++ S YYV FVD ++R+T +Y +K K++ F+ FK EN+
Sbjct: 558 PLEYIYSDVWS-SPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENR 617
Query: 601 LEKRIKRLRSDRG-------------------------------ERKNRTLKEMMNAMLL 660
+ RI SD G ERK+R + E +L
Sbjct: 618 FQTRIGTFYSDNGGEFVALWEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLS 677
Query: 661 SSGLSDNMWREAVLSACFILNRIPHKRLD-KTPYELWKGHAPNLSYLKVWGCLAKVPFPA 720
+ + W A A +++NR+P L ++P++ G +PN L+V+GC
Sbjct: 678 HASIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRP 737
Query: 721 LKKTTVGPKTFDCIFIG----------MH---------------------DPEIVSETPV 780
+ + K+ C+F+G +H + + +PV
Sbjct: 738 YNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFDENCFPFSNYLATLSPV 797
Query: 781 SET-------------------------------VDTPNLSCELELRRSK--RQRTEKSF 840
E TP S R S+ + SF
Sbjct: 798 QEQRRESSCVWSPHTTLPTRTPVLPAPSCSDPHHAATPPSSPSAPFRNSQVSSSNLDSSF 857
Query: 841 GPDF-------------------------------------------------LST---- 900
F LST
Sbjct: 858 SSSFPSSPEPTAPRQNGPQPTTQPTQTQTQTHSSQNTSQNNPTNESPSQLAQSLSTPAQS 917
Query: 901 --------------------------------FIVERRDEIDCKFTNL------YLIDED 960
IV ++ ++ +I +
Sbjct: 918 SSSSPSPTTSASSSSTSPTPPSILIHPPPPLAQIVNNNNQAPLNTHSMGTRAKAGIIKPN 977
Query: 961 PKTYQEV-----------LNFVDSSMWKEAIKSKLDLLVMNHTWELVDLPMGNKPI-RCK 1020
PK V + + W+ A+ S+++ + NHTW+LV P + I C+
Sbjct: 978 PKYSLAVSLAAESEPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCR 1037
Query: 1021 WIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLI 1080
WIF +K +G + RYKARLV GY Q+ G+DY +T+SPV K T+IR ++ +A + I
Sbjct: 1038 WIFTKKYNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPI 1097
Query: 1081 HQMDVKTAFLNGDLEEEIYMTQLEDFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTL 1140
Q+DV AFL G L +++YM+Q F + N VCKLRK+LYGLKQAP+ WY + N L
Sbjct: 1098 RQLDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYL 1157
Query: 1141 ITNGFKINSSDTCVYSKMVGADCILICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDMG 1157
+T GF + SDT ++ G + + +YVDD+LI G + L+ +T LS F +KD
Sbjct: 1158 LTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHE 1217
BLAST of IVF0012244 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 320.5 bits (820), Expect = 8.0e-86
Identity = 334/1477 (22.61%), Postives = 568/1477 (38.46%), Query Frame = 0
Query: 1 MTLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPL 60
+ +S + L TNY WS+++ F+ E+ L D T PP T T + P +
Sbjct: 18 VNMSNVTKLTSTNYLMWSRQVHALFDGYELAGFL--DGSTPMPPATIGTDAVPRVNP--- 77
Query: 61 TTVAVTDQVQKDQVIDSEKYAKDTKTVRGHLLNHMSDPMFDLFVVQKSAKDIWSTLESRY 120
D ++ + K + +L +S + +A IW TL Y
Sbjct: 78 ---------------DYTRWRRQDKLIYSAILGAISMSVQPAVSRATTAAQIWETLRKIY 137
Query: 121 GGDDAG---QKKYV--------VGKWLQFQMTDDKPVVEQIHEYENLVANVLLEKFPPSW 180
G Q +++ +GK + ++ + +Y+ ++ + + PPS
Sbjct: 138 ANPSYGHVTQLRFITRFDQLALLGKPMDHDEQVERVLENLPDDYKPVIDQIAAKDTPPSL 197
Query: 181 NDYRNHLKHKKKDLK----------LQELISHMRTEEANRLKDKLACKNLNSVNANLVES 240
+ L +++ L +++H T ++ +N N+ N
Sbjct: 198 TEIHERLINRESKLLALNSAEVVPITANVVTHRNTNTNRNQNNRGDNRNYNNNN------ 257
Query: 241 SFVNRDRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQC---NQRKGR 300
NR + Q G S+ RQ K G+ C +C +GH + +C +Q +
Sbjct: 258 ---NRSNSWQPSS-SGSRSDNRQPKPYLGR-------CQICSVQGHSAKRCPQLHQFQST 317
Query: 301 PSQKPTPQAHLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADG 360
+Q+ + Q +A N N +W+LD+GA+ H ++ L ++ G
Sbjct: 318 TNQQQSTSPFTPWQPRANLA----VNSPYNANNWLLDSGATHHITSDFNNLSFHQPYTGG 377
Query: 361 ECVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVFGSLL---NRAGLKI 420
+ V + + +T + G L TS ++L L+ VLYVP++ +NL+ L NR ++
Sbjct: 378 DDVMIADGSTIPITHTGSASLP-TSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVSVEF 437
Query: 421 VLEGDKVVFTKNGDFVGKGYLSNGLF---VLNTISMNENASSSAYLIESANLWHGRLGHV 480
+V G + +G + L+ + ++ +++ AS + S+ WH RLGH
Sbjct: 438 FPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHSS--WHSRLGHP 497
Query: 481 NFA---SIRKLKDLRLINTSETHETGKCPVCIESKFHKKPFKPVEYKTTELLELIHSNLA 540
+ A S+ L ++N S H+ C C +K HK PF +++ LE I+S++
Sbjct: 498 SLAILNSVISNHSLPVLNPS--HKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVW 557
Query: 541 DFRTTTSRGGKNYYVSFVDDYSRFTKIYLIKTKNEAVTMFVKFKAESENQLEKRIKRLRS 600
S YYV FVD ++R+T +Y +K K++ F+ FK+ EN+ + RI L S
Sbjct: 558 S-SPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYS 617
Query: 601 DRG-------------------------------ERKNRTLKEMMNAMLLSSGLSDNMWR 660
D G ERK+R + EM +L + + W
Sbjct: 618 DNGGEFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWP 677
Query: 661 EAVLSACFILNRIPHKRLD-KTPYELWKGHAPNLSYLKVWGCLAKVPFPALKKTTVGPKT 720
A A +++NR+P L ++P++ G PN LKV+GC + + K+
Sbjct: 678 YAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKS 737
Query: 721 FDCIFIG----------MHDP--------------------------------------- 780
C F+G +H P
Sbjct: 738 KQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTSQEQRSDSAPN 797
Query: 781 ------------------------------------------------------------ 840
Sbjct: 798 WPSHTTLPTTPLVLPAPPCLGPHLDTSPRPPSSPSPLCTTQVSSSNLPSSSISSPSSSEP 857
Query: 841 -------------------------------------------EIVSETPVSET-VDTPN 900
+ ++P+S + TP+
Sbjct: 858 TAPSHNGPQPTAQPHQTQNSNSNSPILNNPNPNSPSPNSPNQNSPLPQSPISSPHIPTPS 917
Query: 901 LSCELELRRSKRQRTEKSFGPDFLSTFIVE--------------------RRDEIDCKFT 960
S S + P + I++ R+ +
Sbjct: 918 TSISEPNSPSSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYA 977
Query: 961 NLYLIDEDPKTYQEVLNFVDSSMWKEAIKSKLDLLVMNHTWELVDLPMGNKPI-RCKWIF 1020
+ +P+T + + W++A+ S+++ + NHTW+LV P + I C+WIF
Sbjct: 978 TSLAANSEPRT---AIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIF 1037
Query: 1021 KRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQM 1080
+K +G + RYKARLV GY Q+ G+DY +T+SPV K T+IR ++ +A + I Q+
Sbjct: 1038 TKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQL 1097
Query: 1081 DVKTAFLNGDLEEEIYMTQLEDFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITN 1140
DV AFL G L +E+YM+Q F + + VC+LRK++YGLKQAP+ WY + L+T
Sbjct: 1098 DVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTV 1157
Query: 1141 GFKINSSDTCVYSKMVGADCILICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDMGEAD 1157
GF + SDT ++ G I + +YVDD+LI G + L+ T LS F +K+ +
Sbjct: 1158 GFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLH 1217
BLAST of IVF0012244 vs. ExPASy Swiss-Prot
Match:
P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)
HSP 1 Score: 87.4 bits (215), Expect = 1.1e-15
Identity = 53/162 (32.72%), Postives = 82/162 (50.62%), Query Frame = 0
Query: 841 MDVKTAFLNGDLEEEIYMTQLEDFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLIT 900
MDV TAFLN ++E IY+ Q F + V +L +YGLKQAP W E NNTL
Sbjct: 1 MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60
Query: 901 NGFKINSSDTCVYSKMVGADCILICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDMGEA 960
GF + + +Y + I I +YVDD+L+ + ++ K L+ + MKD+G+
Sbjct: 61 IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120
Query: 961 DVILGVKIRKNKT-SLSLCQSHYVEKILKKFDSFDVSPVRTP 1002
D LG+ I ++ ++L Y+ K + + +TP
Sbjct: 121 DKFLGLNIHQSSNGDITLSLQDYIAKAASESEINTFKLTQTP 162
BLAST of IVF0012244 vs. ExPASy TrEMBL
Match:
A0A5D3C5T2 (Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold70G00500 PE=4 SV=1)
HSP 1 Score: 2147.1 bits (5562), Expect = 0.0e+00
Identity = 1112/1333 (83.42%), Postives = 1133/1333 (85.00%), Query Frame = 0
Query: 3 LSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTT 62
LSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLT
Sbjct: 13 LSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTA 72
Query: 63 VAVTDQVQKDQVIDSEKYAKDTKTVRGHLLNHMSDPMFDLFVVQKSAKDIWSTLESRYGG 122
VAVTDQV+KDQVID EKYAKD KTVRGHLLNHMSDPMFDLFVVQKSAKDIWSTLESRYGG
Sbjct: 73 VAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAKDIWSTLESRYGG 132
Query: 123 DDAGQKKYVVGKWLQFQMTDDKPVVEQIHEYENLV---------------ANVLLEKFPP 182
DDAG+KKYVVGKWLQFQM DDKPVVEQIHEYENLV ANVLLEKFPP
Sbjct: 133 DDAGRKKYVVGKWLQFQMNDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPP 192
Query: 183 SWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLACKNLNSVNANLVESSFVNRDRT 242
SWNDYRNHLKHKKKDL+L ELISHMRTEEANRLKDKLA +NLNSVNANLVESSFVNRDRT
Sbjct: 193 SWNDYRNHLKHKKKDLRLPELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNRDRT 252
Query: 243 KQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQAHL 302
KQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQA+L
Sbjct: 253 KQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANL 312
Query: 303 AEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATA 362
AEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATA
Sbjct: 313 AEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATA 372
Query: 363 GVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVFGSLLNRAGLKIVLEGDKVVFTKNGD 422
GVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLV GSLLNRAGLKIVLEGDKVV TKNGD
Sbjct: 373 GVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGD 432
Query: 423 FVGKGYLSNGLFVLNTISMNENASSSAYLIESANLWHGRLGHVNFASIRKLKDLRLINTS 482
FVGKGYLSNGLFVLNTISMN NASSSAYLIESANLWHGRLGHVNFASIRKLKD+RLINTS
Sbjct: 433 FVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLKDMRLINTS 492
Query: 483 ETHETGKCPVCIESKFHKKPFKPVEYKTTELLELIHSNLADFRTTTSRGGKNYYVSFVDD 542
ETHETGKC +CIESKFHKKPFKPVEY+TTELLELIHS+LADFRTT SRGGKNYYVSFVDD
Sbjct: 493 ETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDD 552
Query: 543 YSRFTKIYLIKTKNEAVTMFVKFKAESENQLEKRIKRLRSDRG----------------- 602
YSR+TKIYLI+TKNEAV+MF+KFKAESENQL KRIKRLRSDRG
Sbjct: 553 YSRYTKIYLIRTKNEAVSMFIKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGI 612
Query: 603 ----------------ERKNRTLKEMMNAMLLSSGLSDNMWREAVLSACFILNRIPHKRL 662
ERKNRTLKEMMNAMLLSSGLSDNMW EAVLSACFILNRIPHKRL
Sbjct: 613 IHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSACFILNRIPHKRL 672
Query: 663 DKTPYELWKGHAPNLSYLKVWGCLAKVPFPALKKTTVGPKTFDCIFIG------------ 722
DKTPYELWKGHAPNLSYLKVWGCLAKVP PALKKTTVGPKTFDCIFIG
Sbjct: 673 DKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMC 732
Query: 723 ---------------------------------MHDPEIVSETPVSETVDTPNLSCELEL 782
MHDPEIVSE PVSETVDTPNLSCELE
Sbjct: 733 LNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSETVDTPNLSCELEP 792
Query: 783 RRSKRQRTEKSFGPDFLSTFIVERRDEIDCKFTNLYLIDEDPKTYQEVLNFVDSSMWKEA 842
RRSKRQRTEKSFGPDFLSTFIVERRDEIDC FTNL+LIDEDPKTYQE LN VDS MWKEA
Sbjct: 793 RRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVDSRMWKEA 852
Query: 843 IKSKLDLLVMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGV 902
IKS+LD L MNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGV
Sbjct: 853 IKSELDSLAMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGV 912
Query: 903 DYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGDLEEEIYMTQLEDFKISGQ 962
DYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNG+LEEEIYMTQ E FKISGQ
Sbjct: 913 DYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGNLEEEIYMTQPEGFKISGQ 972
Query: 963 ENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLYVD 1022
ENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLYVD
Sbjct: 973 ENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLYVD 1032
Query: 1023 DMLIFGTNMELITDTKFFLSSHFEMKDMGEADVILGVKIRKNKTSLSLCQSHYVEKILKK 1082
DMLIFGTNMELITDTK+FLSSHFEMKD+GEADVILGVKIRKNKTSLSLCQSHYVEKILKK
Sbjct: 1033 DMLIFGTNMELITDTKYFLSSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKK 1092
Query: 1083 FDSFDVSPVRTPFDA--------------------------------------------- 1142
FDSFDVSPVRTPFDA
Sbjct: 1093 FDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRY 1152
Query: 1143 ------------------------------------KGYCDANWVTDNDEVNSTSGYVFL 1162
+GYCDANWVTDNDEVNSTSGYVFL
Sbjct: 1153 THNPNRYHWDALRHLLRYLKGTIDYCLHFKKFPAVLEGYCDANWVTDNDEVNSTSGYVFL 1212
BLAST of IVF0012244 vs. ExPASy TrEMBL
Match:
A0A5D3BZI1 (Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold675G00770 PE=4 SV=1)
HSP 1 Score: 1729.1 bits (4477), Expect = 0.0e+00
Identity = 941/1333 (70.59%), Postives = 958/1333 (71.87%), Query Frame = 0
Query: 3 LSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTT 62
LSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLT
Sbjct: 13 LSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTA 72
Query: 63 VAVTDQVQKDQVIDSEKYAKDTKTVRGHLLNHMSDPMFDLFVVQKSAKDIWSTLESRYGG 122
VAVTDQV+KDQVID EKYAKD KTVRGHLLNHMSDPMFDLFVVQKSAKDIWSTLESRYGG
Sbjct: 73 VAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAKDIWSTLESRYGG 132
Query: 123 DDAGQKKYVVGKWLQFQMTDDKPVVEQIHEYENLV---------------ANVLLEKFPP 182
DDAG+KKYVVGKWLQFQMTDDKPV+EQIHEYENLV ANVLLEKFPP
Sbjct: 133 DDAGRKKYVVGKWLQFQMTDDKPVMEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPP 192
Query: 183 SWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLACKNLNSVNANLVESSFVNRDRT 242
SWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLA +NLNSVNANLVESSFVNRDRT
Sbjct: 193 SWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNRDRT 252
Query: 243 KQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQAHL 302
KQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQA+L
Sbjct: 253 KQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANL 312
Query: 303 AEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATA 362
AEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATA
Sbjct: 313 AEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATA 372
Query: 363 GVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVFGSLLNRAGLKIVLEGDKVVFTKNGD 422
GVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLV GSLLNRAGLKIVLEGDKVV TKNGD
Sbjct: 373 GVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGD 432
Query: 423 FVGKGYLSNGLFVLNTISMNENASSSAYLIESANLWHGRLGHVNFASIRKLKDLRLINTS 482
FVGKGYLSNGLFVLNTISMN NASSSAYLIESANLWHGRLGHVNFASIRKLKD+RLINTS
Sbjct: 433 FVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLKDMRLINTS 492
Query: 483 ETHETGKCPVCIESKFHKKPFKPVEYKTTELLELIHSNLADFRTTTSRGGKNYYVSFVDD 542
ETHETGKCP+CIESKFHKKPFKPVEY+TTELLELIHS+LADFRTT SRGGKNYYVSFVDD
Sbjct: 493 ETHETGKCPICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDD 552
Query: 543 YSRFTKIYLIKTKNEAVTMFVKFKAESENQLEKRIKRLRSDRG----------------- 602
YSRFTKIYLI+TKNEAV+MFVKFKAESENQL KRIKRLRSDRG
Sbjct: 553 YSRFTKIYLIRTKNEAVSMFVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGI 612
Query: 603 ----------------ERKNRTLKEMMNAMLLSSGLSDNMWREAVLSACFILNRIPHKRL 662
ERKNRTLKEMMNAMLLSSGLSDNMW EAVLSACFILNRIPHKRL
Sbjct: 613 IHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSACFILNRIPHKRL 672
Query: 663 DKTPYELWKGHAPNLSYLKVWGCLAKVPFPALKKTTVGPKTFDCIFIG------------ 722
DKTPYELWKGHAPNLSYLKVWGCLAKVP PALKKTTVGPKTFDCIFIG
Sbjct: 673 DKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMC 732
Query: 723 ---------------------------------MHDPEIVSETPVSETVDTPNLSCELEL 782
MHDPEIVSE PVSETVDTPNLSCELE
Sbjct: 733 LNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSETVDTPNLSCELEP 792
Query: 783 RRSKRQRTEKSFGPDFLSTFIVERRDEIDCKFTNLYLIDEDPKTYQEVLNFVDSSMWKEA 842
RRSKRQRTEKSFGPDFLSTFIVERRDEIDC FTNL+LIDEDPKTYQE LN VDS MWKEA
Sbjct: 793 RRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVDSRMWKEA 852
Query: 843 IKSKLDLLVMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGV 902
IKS+LD L MNHTWELVDLPMGNKPIR
Sbjct: 853 IKSELDSLAMNHTWELVDLPMGNKPIRY-------------------------------- 912
Query: 903 DYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGDLEEEIYMTQLEDFKISGQ 962
Sbjct: 913 ------------------------------------------------------------ 972
Query: 963 ENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLYVD 1022
Sbjct: 973 ------------------------------------------------------------ 1032
Query: 1023 DMLIFGTNMELITDTKFFLSSHFEMKDMGEADVILGVKIRKNKTSLSLCQSHYVEKILKK 1082
+GEADVILGVKIRKNKTSLSLCQSHYVEKILKK
Sbjct: 1033 ---------------------------LGEADVILGVKIRKNKTSLSLCQSHYVEKILKK 1092
Query: 1083 FDSFDVSPVRTPFDA--------------------------------------------- 1142
FDSFDVSPVRTPFDA
Sbjct: 1093 FDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRY 1152
Query: 1143 ------------------------------------KGYCDANWVTDNDEVNSTSGYVFL 1162
+GYCDANWVTDNDEVNSTSGYVFL
Sbjct: 1153 THNPNRYHWDALRHLLRYLKGTIDYCLHFKKFPAVLEGYCDANWVTDNDEVNSTSGYVFL 1166
BLAST of IVF0012244 vs. ExPASy TrEMBL
Match:
A0A5D3DSQ3 (Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold124G00930 PE=4 SV=1)
HSP 1 Score: 1720.3 bits (4454), Expect = 0.0e+00
Identity = 937/1333 (70.29%), Postives = 955/1333 (71.64%), Query Frame = 0
Query: 3 LSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTT 62
LSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPT DPPTTTSTSSDPESSTGPLT
Sbjct: 13 LSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTFDPPTTTSTSSDPESSTGPLTA 72
Query: 63 VAVTDQVQKDQVIDSEKYAKDTKTVRGHLLNHMSDPMFDLFVVQKSAKDIWSTLESRYGG 122
+AVTDQV+KDQVID EKYAKD KTVRGHLLNHMSDPMFDLFVVQKSAKDIWSTLESRYGG
Sbjct: 73 IAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAKDIWSTLESRYGG 132
Query: 123 DDAGQKKYVVGKWLQFQMTDDKPVVEQIHEYENLV---------------ANVLLEKFPP 182
DDAG+KKYVVGKWLQFQMTDDKPVVEQIHEYENLV ANVLLEKFPP
Sbjct: 133 DDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPP 192
Query: 183 SWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLACKNLNSVNANLVESSFVNRDRT 242
SWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLA +NLNSVNANLVESSFVNRDRT
Sbjct: 193 SWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNRDRT 252
Query: 243 KQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQAHL 302
KQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQA+L
Sbjct: 253 KQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANL 312
Query: 303 AEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATA 362
AEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATA
Sbjct: 313 AEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATA 372
Query: 363 GVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVFGSLLNRAGLKIVLEGDKVVFTKNGD 422
GVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLV GSLLNRAGLKIVLEGDKVV TKNGD
Sbjct: 373 GVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGD 432
Query: 423 FVGKGYLSNGLFVLNTISMNENASSSAYLIESANLWHGRLGHVNFASIRKLKDLRLINTS 482
FVGKGYLSNGLFVLNTISMN NASSSAYLIESANLWHGRLGHVNFASIRKLKD+RLINTS
Sbjct: 433 FVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLKDMRLINTS 492
Query: 483 ETHETGKCPVCIESKFHKKPFKPVEYKTTELLELIHSNLADFRTTTSRGGKNYYVSFVDD 542
ETHETGKC +CIESKFHKKPFKPVEY+TTELLELIHS+LADFRTT SRGGKNYYVSFVDD
Sbjct: 493 ETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDD 552
Query: 543 YSRFTKIYLIKTKNEAVTMFVKFKAESENQLEKRIKRLRSDRG----------------- 602
YSR+TKIYLI+TKNEAV+MF+KFKAESENQL KRIKRLRSDRG
Sbjct: 553 YSRYTKIYLIRTKNEAVSMFIKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGI 612
Query: 603 ----------------ERKNRTLKEMMNAMLLSSGLSDNMWREAVLSACFILNRIPHKRL 662
ERKNRTLKEMMNAMLLSSGLSDNMW EAVLSACFILNRIPHKRL
Sbjct: 613 IHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSACFILNRIPHKRL 672
Query: 663 DKTPYELWKGHAPNLSYLKVWGCLAKVPFPALKKTTVGPKTFDCIFIG------------ 722
DKTPYELWKGHAPNLSYLKVWGCLAKVP PALKKTTVGPKTFDCIFIG
Sbjct: 673 DKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMC 732
Query: 723 ---------------------------------MHDPEIVSETPVSETVDTPNLSCELEL 782
MHDPEIVSE PVSETVDTPNLSCELE
Sbjct: 733 LNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSETVDTPNLSCELEP 792
Query: 783 RRSKRQRTEKSFGPDFLSTFIVERRDEIDCKFTNLYLIDEDPKTYQEVLNFVDSSMWKEA 842
RRSKRQRTEKSFGPDFLSTFIVERRDEIDC FTNL+LIDEDPKTYQE LN VDS MWKEA
Sbjct: 793 RRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVDSRMWKEA 852
Query: 843 IKSKLDLLVMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGV 902
IKS+LD L MNHTWELVDLPMGNKPIR
Sbjct: 853 IKSELDSLAMNHTWELVDLPMGNKPIRY-------------------------------- 912
Query: 903 DYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGDLEEEIYMTQLEDFKISGQ 962
Sbjct: 913 ------------------------------------------------------------ 972
Query: 963 ENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLYVD 1022
Sbjct: 973 ------------------------------------------------------------ 1032
Query: 1023 DMLIFGTNMELITDTKFFLSSHFEMKDMGEADVILGVKIRKNKTSLSLCQSHYVEKILKK 1082
+GEADVILGVKIRKNKTSLSLCQSHYVEKILKK
Sbjct: 1033 ---------------------------LGEADVILGVKIRKNKTSLSLCQSHYVEKILKK 1092
Query: 1083 FDSFDVSPVRTPFDA--------------------------------------------- 1142
FDSFDVSPVRTPFDA
Sbjct: 1093 FDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRY 1152
Query: 1143 ------------------------------------KGYCDANWVTDNDEVNSTSGYVFL 1162
+GYCDANWVTDNDEVNSTSGYVFL
Sbjct: 1153 THNPNRYHWDALRHLLRYLKGTIDYCLHFKKFPAVLEGYCDANWVTDNDEVNSTSGYVFL 1166
BLAST of IVF0012244 vs. ExPASy TrEMBL
Match:
A0A5A7UTD6 (Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold486G00390 PE=4 SV=1)
HSP 1 Score: 1720.3 bits (4454), Expect = 0.0e+00
Identity = 936/1333 (70.22%), Postives = 955/1333 (71.64%), Query Frame = 0
Query: 3 LSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTT 62
LSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLT
Sbjct: 13 LSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTA 72
Query: 63 VAVTDQVQKDQVIDSEKYAKDTKTVRGHLLNHMSDPMFDLFVVQKSAKDIWSTLESRYGG 122
VAVTDQV+KDQVID EKYAKD KTVRGHLLNHMSDPMFDLFVVQKSAKDIWSTLESRYGG
Sbjct: 73 VAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAKDIWSTLESRYGG 132
Query: 123 DDAGQKKYVVGKWLQFQMTDDKPVVEQIHEYENLV---------------ANVLLEKFPP 182
DDAG+KKYVVGKWLQFQM DDKPVVEQIHEYENLV ANVLLEKFPP
Sbjct: 133 DDAGRKKYVVGKWLQFQMNDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPP 192
Query: 183 SWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLACKNLNSVNANLVESSFVNRDRT 242
SWNDYRNHLKHKKKDL+L ELISHMRTEEANRLKDKLA +NLNSVNANLVESSFVNRDRT
Sbjct: 193 SWNDYRNHLKHKKKDLRLPELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNRDRT 252
Query: 243 KQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQAHL 302
KQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQA+L
Sbjct: 253 KQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANL 312
Query: 303 AEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATA 362
AEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATA
Sbjct: 313 AEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATA 372
Query: 363 GVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVFGSLLNRAGLKIVLEGDKVVFTKNGD 422
GVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLV GSLLNRAGLKIVLEGDKVV TKNGD
Sbjct: 373 GVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGD 432
Query: 423 FVGKGYLSNGLFVLNTISMNENASSSAYLIESANLWHGRLGHVNFASIRKLKDLRLINTS 482
FVGKGYLSNGLFVLNTISMN NASSSAYLIESANLWHGRLGHVNFASIRKLKD+RLINTS
Sbjct: 433 FVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLKDMRLINTS 492
Query: 483 ETHETGKCPVCIESKFHKKPFKPVEYKTTELLELIHSNLADFRTTTSRGGKNYYVSFVDD 542
ETHETGKC +CIESKFHKKPFKPVEY+TTELLELIHS+LADFRTT SRGGKNYYVSFVDD
Sbjct: 493 ETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDD 552
Query: 543 YSRFTKIYLIKTKNEAVTMFVKFKAESENQLEKRIKRLRSDRG----------------- 602
YSR+TKIYLI+TKNEAV+MF+KFKAESENQL KRIKRLRSDRG
Sbjct: 553 YSRYTKIYLIRTKNEAVSMFIKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGI 612
Query: 603 ----------------ERKNRTLKEMMNAMLLSSGLSDNMWREAVLSACFILNRIPHKRL 662
ERKNRTLKEMMNAMLLSSGLSDNMW EAVLSACFILNRIPHKRL
Sbjct: 613 IHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSACFILNRIPHKRL 672
Query: 663 DKTPYELWKGHAPNLSYLKVWGCLAKVPFPALKKTTVGPKTFDCIFIG------------ 722
DKTPYELWKGHAPNLSYLKVWGCLAKVP PALKKTTVGPKTFDCIFIG
Sbjct: 673 DKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMC 732
Query: 723 ---------------------------------MHDPEIVSETPVSETVDTPNLSCELEL 782
MHDPEIVSE PVSETVDTPNLSCELE
Sbjct: 733 LNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSETVDTPNLSCELEP 792
Query: 783 RRSKRQRTEKSFGPDFLSTFIVERRDEIDCKFTNLYLIDEDPKTYQEVLNFVDSSMWKEA 842
RRSKRQRTEKSFGPDFLSTFIVERRDEIDC FTNL+LIDEDPKTYQE LN VDS MWKEA
Sbjct: 793 RRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVDSRMWKEA 852
Query: 843 IKSKLDLLVMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGV 902
IKS+LD L MNHTWELVDLPMGNKPIR
Sbjct: 853 IKSELDSLAMNHTWELVDLPMGNKPIRY-------------------------------- 912
Query: 903 DYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGDLEEEIYMTQLEDFKISGQ 962
Sbjct: 913 ------------------------------------------------------------ 972
Query: 963 ENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLYVD 1022
Sbjct: 973 ------------------------------------------------------------ 1032
Query: 1023 DMLIFGTNMELITDTKFFLSSHFEMKDMGEADVILGVKIRKNKTSLSLCQSHYVEKILKK 1082
+GEADVILGVKIRKNKTSLSLCQSHYVEKILKK
Sbjct: 1033 ---------------------------LGEADVILGVKIRKNKTSLSLCQSHYVEKILKK 1092
Query: 1083 FDSFDVSPVRTPFDA--------------------------------------------- 1142
FDSFDVSPVRTPFDA
Sbjct: 1093 FDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRY 1152
Query: 1143 ------------------------------------KGYCDANWVTDNDEVNSTSGYVFL 1162
+GYCDANWVTDNDEVNSTSGYVFL
Sbjct: 1153 THNPNRYHWDALRHLLRYLKGTIDYCLHFKKFPAVLEGYCDANWVTDNDEVNSTSGYVFL 1166
BLAST of IVF0012244 vs. ExPASy TrEMBL
Match:
A0A5D3BWR7 (Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1734G00230 PE=4 SV=1)
HSP 1 Score: 1718.7 bits (4450), Expect = 0.0e+00
Identity = 935/1333 (70.14%), Postives = 955/1333 (71.64%), Query Frame = 0
Query: 3 LSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTT 62
LSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPT DPPTTTSTSSDPESSTGPLT
Sbjct: 13 LSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTPDPPTTTSTSSDPESSTGPLTA 72
Query: 63 VAVTDQVQKDQVIDSEKYAKDTKTVRGHLLNHMSDPMFDLFVVQKSAKDIWSTLESRYGG 122
VAVTDQV+KDQVID EKYAKD KTVRGHLLNHMSDPMFDLFVVQKSAKDIWSTL+SRYGG
Sbjct: 73 VAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAKDIWSTLKSRYGG 132
Query: 123 DDAGQKKYVVGKWLQFQMTDDKPVVEQIHEYENLV---------------ANVLLEKFPP 182
DDAG+KKYVVGKWLQFQMTDDKPVVEQIHEYENLV ANVLLEKFPP
Sbjct: 133 DDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPP 192
Query: 183 SWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLACKNLNSVNANLVESSFVNRDRT 242
SWNDYRNHLKHKKKDL+L ELISHMRTEEANRLKDKLA +NLNSVNANLVESSFVNRDRT
Sbjct: 193 SWNDYRNHLKHKKKDLRLPELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNRDRT 252
Query: 243 KQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQAHL 302
KQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQA+L
Sbjct: 253 KQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANL 312
Query: 303 AEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATA 362
AEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATA
Sbjct: 313 AEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATA 372
Query: 363 GVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVFGSLLNRAGLKIVLEGDKVVFTKNGD 422
GVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLV GSLLNRAGLKIVLEGDKVV TKNGD
Sbjct: 373 GVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGD 432
Query: 423 FVGKGYLSNGLFVLNTISMNENASSSAYLIESANLWHGRLGHVNFASIRKLKDLRLINTS 482
FVGKGYLSNGLFVLNTISMN NASSSAYLIESANLWHGRLGHVNFASIRKLKD+RLINTS
Sbjct: 433 FVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLKDMRLINTS 492
Query: 483 ETHETGKCPVCIESKFHKKPFKPVEYKTTELLELIHSNLADFRTTTSRGGKNYYVSFVDD 542
ETHETGKC +CIESKFHKKPFKPVEY+TTELLELIHS+LADFRTT SRGGKNYYVSFVDD
Sbjct: 493 ETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDD 552
Query: 543 YSRFTKIYLIKTKNEAVTMFVKFKAESENQLEKRIKRLRSDRG----------------- 602
YSR+TKIYLI+TKNEAV+MF+KFKAESENQL KRIKRLRSDRG
Sbjct: 553 YSRYTKIYLIRTKNEAVSMFIKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGI 612
Query: 603 ----------------ERKNRTLKEMMNAMLLSSGLSDNMWREAVLSACFILNRIPHKRL 662
ERKNRTLKEMMNAMLLSSGLSDNMW EAVLSACFILNRIPHKRL
Sbjct: 613 IHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSACFILNRIPHKRL 672
Query: 663 DKTPYELWKGHAPNLSYLKVWGCLAKVPFPALKKTTVGPKTFDCIFIG------------ 722
DKTPYELWKGHAPNLSYLKVWGCLAKVP PALKKTTVGPKTFDCIFIG
Sbjct: 673 DKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMC 732
Query: 723 ---------------------------------MHDPEIVSETPVSETVDTPNLSCELEL 782
MHDPEIVSE PVSETVDTPNLSCELE
Sbjct: 733 LNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSETVDTPNLSCELEP 792
Query: 783 RRSKRQRTEKSFGPDFLSTFIVERRDEIDCKFTNLYLIDEDPKTYQEVLNFVDSSMWKEA 842
RRSKRQRTEKSFGPDFLSTFIVERRDEIDC FTNL+LIDEDPKTYQE LN VDS MWKEA
Sbjct: 793 RRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVDSRMWKEA 852
Query: 843 IKSKLDLLVMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGV 902
IKS+LD L MNHTWELVDLPMGNKPIR
Sbjct: 853 IKSELDSLAMNHTWELVDLPMGNKPIRY-------------------------------- 912
Query: 903 DYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGDLEEEIYMTQLEDFKISGQ 962
Sbjct: 913 ------------------------------------------------------------ 972
Query: 963 ENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLYVD 1022
Sbjct: 973 ------------------------------------------------------------ 1032
Query: 1023 DMLIFGTNMELITDTKFFLSSHFEMKDMGEADVILGVKIRKNKTSLSLCQSHYVEKILKK 1082
+GEADVILGVKIRKNKTSLSLCQSHYVEKILKK
Sbjct: 1033 ---------------------------LGEADVILGVKIRKNKTSLSLCQSHYVEKILKK 1092
Query: 1083 FDSFDVSPVRTPFDA--------------------------------------------- 1142
FDSFDVSPVRTPFDA
Sbjct: 1093 FDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRY 1152
Query: 1143 ------------------------------------KGYCDANWVTDNDEVNSTSGYVFL 1162
+GYCDANWVTDNDEVNSTSGYVFL
Sbjct: 1153 THNPNRYHWDALRHLLRYLKGTIDYCLHFKKFPAVLEGYCDANWVTDNDEVNSTSGYVFL 1166
BLAST of IVF0012244 vs. NCBI nr
Match:
TYK06518.1 (ty1-copia retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 2138 bits (5540), Expect = 0.0
Identity = 1112/1333 (83.42%), Postives = 1133/1333 (85.00%), Query Frame = 0
Query: 3 LSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTT 62
LSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLT
Sbjct: 13 LSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTA 72
Query: 63 VAVTDQVQKDQVIDSEKYAKDTKTVRGHLLNHMSDPMFDLFVVQKSAKDIWSTLESRYGG 122
VAVTDQV+KDQVID EKYAKD KTVRGHLLNHMSDPMFDLFVVQKSAKDIWSTLESRYGG
Sbjct: 73 VAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAKDIWSTLESRYGG 132
Query: 123 DDAGQKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVL---------------LEKFPP 182
DDAG+KKYVVGKWLQFQM DDKPVVEQIHEYENLVANVL LEKFPP
Sbjct: 133 DDAGRKKYVVGKWLQFQMNDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPP 192
Query: 183 SWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLACKNLNSVNANLVESSFVNRDRT 242
SWNDYRNHLKHKKKDL+L ELISHMRTEEANRLKDKLA +NLNSVNANLVESSFVNRDRT
Sbjct: 193 SWNDYRNHLKHKKKDLRLPELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNRDRT 252
Query: 243 KQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQAHL 302
KQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQA+L
Sbjct: 253 KQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANL 312
Query: 303 AEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATA 362
AEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATA
Sbjct: 313 AEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATA 372
Query: 363 GVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVFGSLLNRAGLKIVLEGDKVVFTKNGD 422
GVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLV GSLLNRAGLKIVLEGDKVV TKNGD
Sbjct: 373 GVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGD 432
Query: 423 FVGKGYLSNGLFVLNTISMNENASSSAYLIESANLWHGRLGHVNFASIRKLKDLRLINTS 482
FVGKGYLSNGLFVLNTISMN NASSSAYLIESANLWHGRLGHVNFASIRKLKD+RLINTS
Sbjct: 433 FVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLKDMRLINTS 492
Query: 483 ETHETGKCPVCIESKFHKKPFKPVEYKTTELLELIHSNLADFRTTTSRGGKNYYVSFVDD 542
ETHETGKC +CIESKFHKKPFKPVEY+TTELLELIHS+LADFRTT SRGGKNYYVSFVDD
Sbjct: 493 ETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDD 552
Query: 543 YSRFTKIYLIKTKNEAVTMFVKFKAESENQLEKRIKRLRSDRG----------------- 602
YSR+TKIYLI+TKNEAV+MF+KFKAESENQL KRIKRLRSDRG
Sbjct: 553 YSRYTKIYLIRTKNEAVSMFIKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGI 612
Query: 603 ----------------ERKNRTLKEMMNAMLLSSGLSDNMWREAVLSACFILNRIPHKRL 662
ERKNRTLKEMMNAMLLSSGLSDNMW EAVLSACFILNRIPHKRL
Sbjct: 613 IHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSACFILNRIPHKRL 672
Query: 663 DKTPYELWKGHAPNLSYLKVWGCLAKVPFPALKKTTVGPKTFDCIFIG------------ 722
DKTPYELWKGHAPNLSYLKVWGCLAKVP PALKKTTVGPKTFDCIFIG
Sbjct: 673 DKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMC 732
Query: 723 ---------------------------------MHDPEIVSETPVSETVDTPNLSCELEL 782
MHDPEIVSE PVSETVDTPNLSCELE
Sbjct: 733 LNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSETVDTPNLSCELEP 792
Query: 783 RRSKRQRTEKSFGPDFLSTFIVERRDEIDCKFTNLYLIDEDPKTYQEVLNFVDSSMWKEA 842
RRSKRQRTEKSFGPDFLSTFIVERRDEIDC FTNL+LIDEDPKTYQE LN VDS MWKEA
Sbjct: 793 RRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVDSRMWKEA 852
Query: 843 IKSKLDLLVMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGV 902
IKS+LD L MNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGV
Sbjct: 853 IKSELDSLAMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGV 912
Query: 903 DYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGDLEEEIYMTQLEDFKISGQ 962
DYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNG+LEEEIYMTQ E FKISGQ
Sbjct: 913 DYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGNLEEEIYMTQPEGFKISGQ 972
Query: 963 ENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLYVD 1022
ENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLYVD
Sbjct: 973 ENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLYVD 1032
Query: 1023 DMLIFGTNMELITDTKFFLSSHFEMKDMGEADVILGVKIRKNKTSLSLCQSHYVEKILKK 1082
DMLIFGTNMELITDTK+FLSSHFEMKD+GEADVILGVKIRKNKTSLSLCQSHYVEKILKK
Sbjct: 1033 DMLIFGTNMELITDTKYFLSSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKK 1092
Query: 1083 FDSFDVSPVRTPFDA--------------------------------------------- 1142
FDSFDVSPVRTPFDA
Sbjct: 1093 FDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRY 1152
Query: 1143 ------------------------------------KGYCDANWVTDNDEVNSTSGYVFL 1161
+GYCDANWVTDNDEVNSTSGYVFL
Sbjct: 1153 THNPNRYHWDALRHLLRYLKGTIDYCLHFKKFPAVLEGYCDANWVTDNDEVNSTSGYVFL 1212
BLAST of IVF0012244 vs. NCBI nr
Match:
TYK04394.1 (ty1-copia retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 1723 bits (4462), Expect = 0.0
Identity = 941/1333 (70.59%), Postives = 958/1333 (71.87%), Query Frame = 0
Query: 3 LSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTT 62
LSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLT
Sbjct: 13 LSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTA 72
Query: 63 VAVTDQVQKDQVIDSEKYAKDTKTVRGHLLNHMSDPMFDLFVVQKSAKDIWSTLESRYGG 122
VAVTDQV+KDQVID EKYAKD KTVRGHLLNHMSDPMFDLFVVQKSAKDIWSTLESRYGG
Sbjct: 73 VAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAKDIWSTLESRYGG 132
Query: 123 DDAGQKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVL---------------LEKFPP 182
DDAG+KKYVVGKWLQFQMTDDKPV+EQIHEYENLVANVL LEKFPP
Sbjct: 133 DDAGRKKYVVGKWLQFQMTDDKPVMEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPP 192
Query: 183 SWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLACKNLNSVNANLVESSFVNRDRT 242
SWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLA +NLNSVNANLVESSFVNRDRT
Sbjct: 193 SWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNRDRT 252
Query: 243 KQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQAHL 302
KQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQA+L
Sbjct: 253 KQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANL 312
Query: 303 AEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATA 362
AEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATA
Sbjct: 313 AEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATA 372
Query: 363 GVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVFGSLLNRAGLKIVLEGDKVVFTKNGD 422
GVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLV GSLLNRAGLKIVLEGDKVV TKNGD
Sbjct: 373 GVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGD 432
Query: 423 FVGKGYLSNGLFVLNTISMNENASSSAYLIESANLWHGRLGHVNFASIRKLKDLRLINTS 482
FVGKGYLSNGLFVLNTISMN NASSSAYLIESANLWHGRLGHVNFASIRKLKD+RLINTS
Sbjct: 433 FVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLKDMRLINTS 492
Query: 483 ETHETGKCPVCIESKFHKKPFKPVEYKTTELLELIHSNLADFRTTTSRGGKNYYVSFVDD 542
ETHETGKCP+CIESKFHKKPFKPVEY+TTELLELIHS+LADFRTT SRGGKNYYVSFVDD
Sbjct: 493 ETHETGKCPICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDD 552
Query: 543 YSRFTKIYLIKTKNEAVTMFVKFKAESENQLEKRIKRLRSDRG----------------- 602
YSRFTKIYLI+TKNEAV+MFVKFKAESENQL KRIKRLRSDRG
Sbjct: 553 YSRFTKIYLIRTKNEAVSMFVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGI 612
Query: 603 ----------------ERKNRTLKEMMNAMLLSSGLSDNMWREAVLSACFILNRIPHKRL 662
ERKNRTLKEMMNAMLLSSGLSDNMW EAVLSACFILNRIPHKRL
Sbjct: 613 IHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSACFILNRIPHKRL 672
Query: 663 DKTPYELWKGHAPNLSYLKVWGCLAKVPFPALKKTTVGPKTFDCIFIG------------ 722
DKTPYELWKGHAPNLSYLKVWGCLAKVP PALKKTTVGPKTFDCIFIG
Sbjct: 673 DKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMC 732
Query: 723 ---------------------------------MHDPEIVSETPVSETVDTPNLSCELEL 782
MHDPEIVSE PVSETVDTPNLSCELE
Sbjct: 733 LNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSETVDTPNLSCELEP 792
Query: 783 RRSKRQRTEKSFGPDFLSTFIVERRDEIDCKFTNLYLIDEDPKTYQEVLNFVDSSMWKEA 842
RRSKRQRTEKSFGPDFLSTFIVERRDEIDC FTNL+LIDEDPKTYQE LN VDS MWKEA
Sbjct: 793 RRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVDSRMWKEA 852
Query: 843 IKSKLDLLVMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGV 902
IKS+LD L MNHTWELVDLPMGNKPIR
Sbjct: 853 IKSELDSLAMNHTWELVDLPMGNKPIRY-------------------------------- 912
Query: 903 DYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGDLEEEIYMTQLEDFKISGQ 962
Sbjct: 913 ------------------------------------------------------------ 972
Query: 963 ENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLYVD 1022
Sbjct: 973 ------------------------------------------------------------ 1032
Query: 1023 DMLIFGTNMELITDTKFFLSSHFEMKDMGEADVILGVKIRKNKTSLSLCQSHYVEKILKK 1082
+GEADVILGVKIRKNKTSLSLCQSHYVEKILKK
Sbjct: 1033 ---------------------------LGEADVILGVKIRKNKTSLSLCQSHYVEKILKK 1092
Query: 1083 FDSFDVSPVRTPFDA--------------------------------------------- 1142
FDSFDVSPVRTPFDA
Sbjct: 1093 FDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRY 1152
Query: 1143 ------------------------------------KGYCDANWVTDNDEVNSTSGYVFL 1161
+GYCDANWVTDNDEVNSTSGYVFL
Sbjct: 1153 THNPNRYHWDALRHLLRYLKGTIDYCLHFKKFPAVLEGYCDANWVTDNDEVNSTSGYVFL 1166
BLAST of IVF0012244 vs. NCBI nr
Match:
KAA0056761.1 (ty1-copia retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 1714 bits (4439), Expect = 0.0
Identity = 936/1333 (70.22%), Postives = 955/1333 (71.64%), Query Frame = 0
Query: 3 LSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTT 62
LSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLT
Sbjct: 13 LSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTA 72
Query: 63 VAVTDQVQKDQVIDSEKYAKDTKTVRGHLLNHMSDPMFDLFVVQKSAKDIWSTLESRYGG 122
VAVTDQV+KDQVID EKYAKD KTVRGHLLNHMSDPMFDLFVVQKSAKDIWSTLESRYGG
Sbjct: 73 VAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAKDIWSTLESRYGG 132
Query: 123 DDAGQKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVL---------------LEKFPP 182
DDAG+KKYVVGKWLQFQM DDKPVVEQIHEYENLVANVL LEKFPP
Sbjct: 133 DDAGRKKYVVGKWLQFQMNDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPP 192
Query: 183 SWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLACKNLNSVNANLVESSFVNRDRT 242
SWNDYRNHLKHKKKDL+L ELISHMRTEEANRLKDKLA +NLNSVNANLVESSFVNRDRT
Sbjct: 193 SWNDYRNHLKHKKKDLRLPELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNRDRT 252
Query: 243 KQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQAHL 302
KQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQA+L
Sbjct: 253 KQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANL 312
Query: 303 AEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATA 362
AEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATA
Sbjct: 313 AEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATA 372
Query: 363 GVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVFGSLLNRAGLKIVLEGDKVVFTKNGD 422
GVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLV GSLLNRAGLKIVLEGDKVV TKNGD
Sbjct: 373 GVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGD 432
Query: 423 FVGKGYLSNGLFVLNTISMNENASSSAYLIESANLWHGRLGHVNFASIRKLKDLRLINTS 482
FVGKGYLSNGLFVLNTISMN NASSSAYLIESANLWHGRLGHVNFASIRKLKD+RLINTS
Sbjct: 433 FVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLKDMRLINTS 492
Query: 483 ETHETGKCPVCIESKFHKKPFKPVEYKTTELLELIHSNLADFRTTTSRGGKNYYVSFVDD 542
ETHETGKC +CIESKFHKKPFKPVEY+TTELLELIHS+LADFRTT SRGGKNYYVSFVDD
Sbjct: 493 ETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDD 552
Query: 543 YSRFTKIYLIKTKNEAVTMFVKFKAESENQLEKRIKRLRSDRG----------------- 602
YSR+TKIYLI+TKNEAV+MF+KFKAESENQL KRIKRLRSDRG
Sbjct: 553 YSRYTKIYLIRTKNEAVSMFIKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGI 612
Query: 603 ----------------ERKNRTLKEMMNAMLLSSGLSDNMWREAVLSACFILNRIPHKRL 662
ERKNRTLKEMMNAMLLSSGLSDNMW EAVLSACFILNRIPHKRL
Sbjct: 613 IHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSACFILNRIPHKRL 672
Query: 663 DKTPYELWKGHAPNLSYLKVWGCLAKVPFPALKKTTVGPKTFDCIFIG------------ 722
DKTPYELWKGHAPNLSYLKVWGCLAKVP PALKKTTVGPKTFDCIFIG
Sbjct: 673 DKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMC 732
Query: 723 ---------------------------------MHDPEIVSETPVSETVDTPNLSCELEL 782
MHDPEIVSE PVSETVDTPNLSCELE
Sbjct: 733 LNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSETVDTPNLSCELEP 792
Query: 783 RRSKRQRTEKSFGPDFLSTFIVERRDEIDCKFTNLYLIDEDPKTYQEVLNFVDSSMWKEA 842
RRSKRQRTEKSFGPDFLSTFIVERRDEIDC FTNL+LIDEDPKTYQE LN VDS MWKEA
Sbjct: 793 RRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVDSRMWKEA 852
Query: 843 IKSKLDLLVMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGV 902
IKS+LD L MNHTWELVDLPMGNKPIR
Sbjct: 853 IKSELDSLAMNHTWELVDLPMGNKPIRY-------------------------------- 912
Query: 903 DYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGDLEEEIYMTQLEDFKISGQ 962
Sbjct: 913 ------------------------------------------------------------ 972
Query: 963 ENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLYVD 1022
Sbjct: 973 ------------------------------------------------------------ 1032
Query: 1023 DMLIFGTNMELITDTKFFLSSHFEMKDMGEADVILGVKIRKNKTSLSLCQSHYVEKILKK 1082
+GEADVILGVKIRKNKTSLSLCQSHYVEKILKK
Sbjct: 1033 ---------------------------LGEADVILGVKIRKNKTSLSLCQSHYVEKILKK 1092
Query: 1083 FDSFDVSPVRTPFDA--------------------------------------------- 1142
FDSFDVSPVRTPFDA
Sbjct: 1093 FDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRY 1152
Query: 1143 ------------------------------------KGYCDANWVTDNDEVNSTSGYVFL 1161
+GYCDANWVTDNDEVNSTSGYVFL
Sbjct: 1153 THNPNRYHWDALRHLLRYLKGTIDYCLHFKKFPAVLEGYCDANWVTDNDEVNSTSGYVFL 1166
BLAST of IVF0012244 vs. NCBI nr
Match:
TYK26791.1 (ty1-copia retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 1714 bits (4439), Expect = 0.0
Identity = 937/1333 (70.29%), Postives = 955/1333 (71.64%), Query Frame = 0
Query: 3 LSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTT 62
LSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPT DPPTTTSTSSDPESSTGPLT
Sbjct: 13 LSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTFDPPTTTSTSSDPESSTGPLTA 72
Query: 63 VAVTDQVQKDQVIDSEKYAKDTKTVRGHLLNHMSDPMFDLFVVQKSAKDIWSTLESRYGG 122
+AVTDQV+KDQVID EKYAKD KTVRGHLLNHMSDPMFDLFVVQKSAKDIWSTLESRYGG
Sbjct: 73 IAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAKDIWSTLESRYGG 132
Query: 123 DDAGQKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVL---------------LEKFPP 182
DDAG+KKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVL LEKFPP
Sbjct: 133 DDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPP 192
Query: 183 SWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLACKNLNSVNANLVESSFVNRDRT 242
SWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLA +NLNSVNANLVESSFVNRDRT
Sbjct: 193 SWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNRDRT 252
Query: 243 KQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQAHL 302
KQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQA+L
Sbjct: 253 KQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANL 312
Query: 303 AEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATA 362
AEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATA
Sbjct: 313 AEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATA 372
Query: 363 GVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVFGSLLNRAGLKIVLEGDKVVFTKNGD 422
GVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLV GSLLNRAGLKIVLEGDKVV TKNGD
Sbjct: 373 GVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGD 432
Query: 423 FVGKGYLSNGLFVLNTISMNENASSSAYLIESANLWHGRLGHVNFASIRKLKDLRLINTS 482
FVGKGYLSNGLFVLNTISMN NASSSAYLIESANLWHGRLGHVNFASIRKLKD+RLINTS
Sbjct: 433 FVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLKDMRLINTS 492
Query: 483 ETHETGKCPVCIESKFHKKPFKPVEYKTTELLELIHSNLADFRTTTSRGGKNYYVSFVDD 542
ETHETGKC +CIESKFHKKPFKPVEY+TTELLELIHS+LADFRTT SRGGKNYYVSFVDD
Sbjct: 493 ETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDD 552
Query: 543 YSRFTKIYLIKTKNEAVTMFVKFKAESENQLEKRIKRLRSDRG----------------- 602
YSR+TKIYLI+TKNEAV+MF+KFKAESENQL KRIKRLRSDRG
Sbjct: 553 YSRYTKIYLIRTKNEAVSMFIKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGI 612
Query: 603 ----------------ERKNRTLKEMMNAMLLSSGLSDNMWREAVLSACFILNRIPHKRL 662
ERKNRTLKEMMNAMLLSSGLSDNMW EAVLSACFILNRIPHKRL
Sbjct: 613 IHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSACFILNRIPHKRL 672
Query: 663 DKTPYELWKGHAPNLSYLKVWGCLAKVPFPALKKTTVGPKTFDCIFIG------------ 722
DKTPYELWKGHAPNLSYLKVWGCLAKVP PALKKTTVGPKTFDCIFIG
Sbjct: 673 DKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMC 732
Query: 723 ---------------------------------MHDPEIVSETPVSETVDTPNLSCELEL 782
MHDPEIVSE PVSETVDTPNLSCELE
Sbjct: 733 LNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSETVDTPNLSCELEP 792
Query: 783 RRSKRQRTEKSFGPDFLSTFIVERRDEIDCKFTNLYLIDEDPKTYQEVLNFVDSSMWKEA 842
RRSKRQRTEKSFGPDFLSTFIVERRDEIDC FTNL+LIDEDPKTYQE LN VDS MWKEA
Sbjct: 793 RRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVDSRMWKEA 852
Query: 843 IKSKLDLLVMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGV 902
IKS+LD L MNHTWELVDLPMGNKPIR
Sbjct: 853 IKSELDSLAMNHTWELVDLPMGNKPIRY-------------------------------- 912
Query: 903 DYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGDLEEEIYMTQLEDFKISGQ 962
Sbjct: 913 ------------------------------------------------------------ 972
Query: 963 ENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLYVD 1022
Sbjct: 973 ------------------------------------------------------------ 1032
Query: 1023 DMLIFGTNMELITDTKFFLSSHFEMKDMGEADVILGVKIRKNKTSLSLCQSHYVEKILKK 1082
+GEADVILGVKIRKNKTSLSLCQSHYVEKILKK
Sbjct: 1033 ---------------------------LGEADVILGVKIRKNKTSLSLCQSHYVEKILKK 1092
Query: 1083 FDSFDVSPVRTPFDA--------------------------------------------- 1142
FDSFDVSPVRTPFDA
Sbjct: 1093 FDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRY 1152
Query: 1143 ------------------------------------KGYCDANWVTDNDEVNSTSGYVFL 1161
+GYCDANWVTDNDEVNSTSGYVFL
Sbjct: 1153 THNPNRYHWDALRHLLRYLKGTIDYCLHFKKFPAVLEGYCDANWVTDNDEVNSTSGYVFL 1166
BLAST of IVF0012244 vs. NCBI nr
Match:
TYK02676.1 (ty1-copia retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 1712 bits (4435), Expect = 0.0
Identity = 935/1333 (70.14%), Postives = 955/1333 (71.64%), Query Frame = 0
Query: 3 LSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTT 62
LSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPT DPPTTTSTSSDPESSTGPLT
Sbjct: 13 LSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTPDPPTTTSTSSDPESSTGPLTA 72
Query: 63 VAVTDQVQKDQVIDSEKYAKDTKTVRGHLLNHMSDPMFDLFVVQKSAKDIWSTLESRYGG 122
VAVTDQV+KDQVID EKYAKD KTVRGHLLNHMSDPMFDLFVVQKSAKDIWSTL+SRYGG
Sbjct: 73 VAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAKDIWSTLKSRYGG 132
Query: 123 DDAGQKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVL---------------LEKFPP 182
DDAG+KKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVL LEKFPP
Sbjct: 133 DDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPP 192
Query: 183 SWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLACKNLNSVNANLVESSFVNRDRT 242
SWNDYRNHLKHKKKDL+L ELISHMRTEEANRLKDKLA +NLNSVNANLVESSFVNRDRT
Sbjct: 193 SWNDYRNHLKHKKKDLRLPELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNRDRT 252
Query: 243 KQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQAHL 302
KQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQA+L
Sbjct: 253 KQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANL 312
Query: 303 AEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATA 362
AEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATA
Sbjct: 313 AEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATA 372
Query: 363 GVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVFGSLLNRAGLKIVLEGDKVVFTKNGD 422
GVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLV GSLLNRAGLKIVLEGDKVV TKNGD
Sbjct: 373 GVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGD 432
Query: 423 FVGKGYLSNGLFVLNTISMNENASSSAYLIESANLWHGRLGHVNFASIRKLKDLRLINTS 482
FVGKGYLSNGLFVLNTISMN NASSSAYLIESANLWHGRLGHVNFASIRKLKD+RLINTS
Sbjct: 433 FVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLKDMRLINTS 492
Query: 483 ETHETGKCPVCIESKFHKKPFKPVEYKTTELLELIHSNLADFRTTTSRGGKNYYVSFVDD 542
ETHETGKC +CIESKFHKKPFKPVEY+TTELLELIHS+LADFRTT SRGGKNYYVSFVDD
Sbjct: 493 ETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDD 552
Query: 543 YSRFTKIYLIKTKNEAVTMFVKFKAESENQLEKRIKRLRSDRG----------------- 602
YSR+TKIYLI+TKNEAV+MF+KFKAESENQL KRIKRLRSDRG
Sbjct: 553 YSRYTKIYLIRTKNEAVSMFIKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGI 612
Query: 603 ----------------ERKNRTLKEMMNAMLLSSGLSDNMWREAVLSACFILNRIPHKRL 662
ERKNRTLKEMMNAMLLSSGLSDNMW EAVLSACFILNRIPHKRL
Sbjct: 613 IHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSACFILNRIPHKRL 672
Query: 663 DKTPYELWKGHAPNLSYLKVWGCLAKVPFPALKKTTVGPKTFDCIFIG------------ 722
DKTPYELWKGHAPNLSYLKVWGCLAKVP PALKKTTVGPKTFDCIFIG
Sbjct: 673 DKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMC 732
Query: 723 ---------------------------------MHDPEIVSETPVSETVDTPNLSCELEL 782
MHDPEIVSE PVSETVDTPNLSCELE
Sbjct: 733 LNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSETVDTPNLSCELEP 792
Query: 783 RRSKRQRTEKSFGPDFLSTFIVERRDEIDCKFTNLYLIDEDPKTYQEVLNFVDSSMWKEA 842
RRSKRQRTEKSFGPDFLSTFIVERRDEIDC FTNL+LIDEDPKTYQE LN VDS MWKEA
Sbjct: 793 RRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVDSRMWKEA 852
Query: 843 IKSKLDLLVMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGV 902
IKS+LD L MNHTWELVDLPMGNKPIR
Sbjct: 853 IKSELDSLAMNHTWELVDLPMGNKPIRY-------------------------------- 912
Query: 903 DYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGDLEEEIYMTQLEDFKISGQ 962
Sbjct: 913 ------------------------------------------------------------ 972
Query: 963 ENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLYVD 1022
Sbjct: 973 ------------------------------------------------------------ 1032
Query: 1023 DMLIFGTNMELITDTKFFLSSHFEMKDMGEADVILGVKIRKNKTSLSLCQSHYVEKILKK 1082
+GEADVILGVKIRKNKTSLSLCQSHYVEKILKK
Sbjct: 1033 ---------------------------LGEADVILGVKIRKNKTSLSLCQSHYVEKILKK 1092
Query: 1083 FDSFDVSPVRTPFDA--------------------------------------------- 1142
FDSFDVSPVRTPFDA
Sbjct: 1093 FDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRY 1152
Query: 1143 ------------------------------------KGYCDANWVTDNDEVNSTSGYVFL 1161
+GYCDANWVTDNDEVNSTSGYVFL
Sbjct: 1153 THNPNRYHWDALRHLLRYLKGTIDYCLHFKKFPAVLEGYCDANWVTDNDEVNSTSGYVFL 1166
BLAST of IVF0012244 vs. TAIR 10
Match:
AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )
HSP 1 Score: 256.5 bits (654), Expect = 1.0e-67
Identity = 155/488 (31.76%), Postives = 241/488 (49.39%), Query Frame = 0
Query: 729 EDPKTYQEVLNFVDSSMWKEAIKSKLDLLVMNHTWELVDLPMGNKPIRCKWIFKRKTKPN 788
++P TY E F+ +W A+ ++ + HTWE+ LP KPI CKW++K K +
Sbjct: 84 KEPSTYNEAKEFL---VWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSD 143
Query: 789 GLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFL 848
G IERYKARLV GYTQ++G+D+ +T+SPV K+T+++ ++A++AI+N +HQ+D+ AFL
Sbjct: 144 GTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFL 203
Query: 849 NGDLEEEIYMTQLEDFKI----SGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFK 908
NGDL+EEIYM + S N VC L+KS+YGLKQA +QW+ KF+ TLI GF
Sbjct: 204 NGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFV 263
Query: 909 INSSDTCVYSKMVGADCILICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDMGEADVIL 968
+ SD + K+ + + +YVDD++I N + + K L S F+++D+G L
Sbjct: 264 QSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFL 323
Query: 969 GVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPF---------------DAKGY-- 1028
G++I ++ +++CQ Y +L + P P DAK Y
Sbjct: 324 GLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRR 383
Query: 1029 ------------------------------------------------------------ 1088
Sbjct: 384 LIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEM 443
Query: 1089 -----CDANWVTDNDEVNSTSGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQE 1128
DA++ + D ST+GY LG ISWKS KQ +++S+ E+E+ AL A E
Sbjct: 444 QLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDE 503
BLAST of IVF0012244 vs. TAIR 10
Match:
ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )
HSP 1 Score: 83.6 bits (205), Expect = 1.2e-15
Identity = 40/105 (38.10%), Postives = 65/105 (61.90%), Query Frame = 0
Query: 727 IDEDPKTYQEVLNFVDSSMWKEAIKSKLDLLVMNHTWELVDLPMGNKPIRCKWIFKRKTK 786
I ++PK+ V+ + W +A++ +LD L N TW LV P+ + CKW+FK K
Sbjct: 24 IKKEPKS---VIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLH 83
Query: 787 PNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALA 832
+G ++R KARLV G+ Q++G+ + +TYSPV + TIR ++ +A
Sbjct: 84 SDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125
BLAST of IVF0012244 vs. TAIR 10
Match:
AT4G00980.1 (zinc knuckle (CCHC-type) family protein )
HSP 1 Score: 81.3 bits (199), Expect = 5.8e-15
Identity = 66/284 (23.24%), Postives = 131/284 (46.13%), Query Frame = 0
Query: 5 KLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTTVA 64
K+ DG +Y W+ ++ +F +QL++ YVL S+P + +S PE++ +T
Sbjct: 194 KISRFDGKSYLYWASQMELFLKQLKLTYVL------SEPCPSIGSSQGPETNPREITRAD 253
Query: 65 VTDQVQKDQVIDSEKYAKDTKTVRGHLLNHMSDPMFDLFVVQ-KSAKDIWSTLESRYGGD 124
T +K+ +D HL+N +SD ++ + + K AK++W L+ Y D
Sbjct: 254 AT----------GKKWLRDDYLCYTHLMNSLSDHLYRRYSQKFKHAKELWDELKWVYQCD 313
Query: 125 DAGQKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANV---------------LLEKFPPS 184
++ K+ V K+++F+M +++P++EQ+ + + ++ ++ KFPPS
Sbjct: 314 ESKSKRSQVRKYIEFRMVEERPILEQVQVFNKIADSIVSAGMFLDEAFHVSTIISKFPPS 373
Query: 185 WNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLACKNLNSVNANLVE--SSFVNRDR 244
W + L +++ L + L+ ++ EE + ++ +E S R
Sbjct: 374 WRGFCTRLM-EEEYLPVWMLMERVKAEEELLRNGAKGVTYRPATGSSQMERTPSLGTTHR 433
Query: 245 TKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQC 271
Q G K K E+ + + +VC CG++GH + C
Sbjct: 434 GSQSVGWKRKEPERDE---------RVIIVCDNCGRKGHLAKHC 451
BLAST of IVF0012244 vs. TAIR 10
Match:
ATMG00810.1 (DNA/RNA polymerases superfamily protein )
HSP 1 Score: 72.4 bits (176), Expect = 2.7e-12
Identity = 53/224 (23.66%), Postives = 81/224 (36.16%), Query Frame = 0
Query: 924 ICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDMGEADVILGVKIRKNKTSLSLCQSHYV 983
+ LYVDD+L+ G++ L+ F LSS F MKD+G LG++I+ + + L L Q+ Y
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62
Query: 984 EKILKKFDSFDVSPVRTPFDAK-------------------------------------- 1043
E+IL D P+ TP K
Sbjct: 63 EQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVN 122
Query: 1044 -------------------------------------------GYCDANWVTDNDEVNST 1067
+CD++W ST
Sbjct: 123 IVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRST 182
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P10978 | 1.9e-143 | 28.73 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
P04146 | 8.8e-93 | 24.33 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
Q94HW2 | 6.5e-88 | 23.24 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
Q9ZT94 | 8.0e-86 | 22.61 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
P25600 | 1.1e-15 | 32.72 | Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT... | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3C5T2 | 0.0e+00 | 83.42 | Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
A0A5D3BZI1 | 0.0e+00 | 70.59 | Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
A0A5D3DSQ3 | 0.0e+00 | 70.29 | Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
A0A5A7UTD6 | 0.0e+00 | 70.22 | Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
A0A5D3BWR7 | 0.0e+00 | 70.14 | Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
Match Name | E-value | Identity | Description | |
TYK06518.1 | 0.0 | 83.42 | ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | [more] |
TYK04394.1 | 0.0 | 70.59 | ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | [more] |
KAA0056761.1 | 0.0 | 70.22 | ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | [more] |
TYK26791.1 | 0.0 | 70.29 | ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | [more] |
TYK02676.1 | 0.0 | 70.14 | ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
AT4G23160.1 | 1.0e-67 | 31.76 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | [more] |
ATMG00820.1 | 1.2e-15 | 38.10 | Reverse transcriptase (RNA-dependent DNA polymerase) | [more] |
AT4G00980.1 | 5.8e-15 | 23.24 | zinc knuckle (CCHC-type) family protein | [more] |
ATMG00810.1 | 2.7e-12 | 23.66 | DNA/RNA polymerases superfamily protein | [more] |