IVF0012203 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGACACATGTCACAGCATCGGGAGAGGCATTCCTGACACCGTGTTGGTACGGCGTCGGGAATGCCTCTCCCGACTCGGTTTTTCTGACATTTGTCCTGATGCCGTGAAATACGTCGGCATATCATTTCCCGACGTATTTTTCATTTTCGTCGACGTTTTTATGCGTCGAGAGTACCCCCGTCTCTTATAG ATGGCCGACACATGTCACAGCATCGGGAGAGGCATTCCTGACACCGTGTTGGTACGGCGTCGGGAATGCCTCTCCCGACTCGGTTTTTCTGACATTTGTCCTGATGCCGTGAAATACGTCGGCATATCATTTCCCGACGTATTTTTCATTTTCGTCGACGTTTTTATGCGTCGAGAGTACCCCCGTCTCTTATAG ATGGCCGACACATGTCACAGCATCGGGAGAGGCATTCCTGACACCGTGTTGGTACGGCGTCGGGAATGCCTCTCCCGACTCGGTTTTTCTGACATTTGTCCTGATGCCGTGAAATACGTCGGCATATCATTTCCCGACGTATTTTTCATTTTCGTCGACGTTTTTATGCGTCGAGAGTACCCCCGTCTCTTATAG MADTCHSIGRGIPDTVLVRRRECLSRLGFSDICPDAVKYVGISFPDVFFIFVDVFMRREYPRLL Homology
BLAST of IVF0012203 vs. ExPASy TrEMBL
Match: A0A5D3CRC0 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold186G00660 PE=4 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 5.7e-13 Identity = 40/63 (63.49%), Postives = 45/63 (71.43%), Query Frame = 0
BLAST of IVF0012203 vs. ExPASy TrEMBL
Match: A0A5A7UPN4 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G00290 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 6.1e-07 Identity = 30/44 (68.18%), Postives = 33/44 (75.00%), Query Frame = 0
BLAST of IVF0012203 vs. ExPASy TrEMBL
Match: A0A5D3DGV6 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G00040 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 4.0e-06 Identity = 29/53 (54.72%), Postives = 36/53 (67.92%), Query Frame = 0
BLAST of IVF0012203 vs. ExPASy TrEMBL
Match: A0A5D3E1C4 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1212G00160 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 3.4e-05 Identity = 26/45 (57.78%), Postives = 30/45 (66.67%), Query Frame = 0
BLAST of IVF0012203 vs. ExPASy TrEMBL
Match: A0A5A7UWQ1 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold612G00110 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 3.4e-05 Identity = 26/45 (57.78%), Postives = 30/45 (66.67%), Query Frame = 0
BLAST of IVF0012203 vs. NCBI nr
Match: TYK14413.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 83.2 bits (204), Expect = 6.53e-18 Identity = 40/63 (63.49%), Postives = 45/63 (71.43%), Query Frame = 0
BLAST of IVF0012203 vs. NCBI nr
Match: KAA0056276.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK05223.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 62.4 bits (150), Expect = 2.51e-09 Identity = 30/44 (68.18%), Postives = 33/44 (75.00%), Query Frame = 0
BLAST of IVF0012203 vs. NCBI nr
Match: TYK22927.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa]) HSP 1 Score: 60.5 bits (145), Expect = 3.25e-09 Identity = 29/53 (54.72%), Postives = 36/53 (67.92%), Query Frame = 0
BLAST of IVF0012203 vs. NCBI nr
Match: TYK01082.1 (zinc finger protein ZPR1-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 57.4 bits (137), Expect = 5.81e-08 Identity = 28/54 (51.85%), Postives = 36/54 (66.67%), Query Frame = 0
BLAST of IVF0012203 vs. NCBI nr
Match: TYK21553.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 56.6 bits (135), Expect = 2.74e-07 Identity = 24/34 (70.59%), Postives = 27/34 (79.41%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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