IVF0012181 (gene) Melon (IVF77) v1

Overview


Name	IVF0012181
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	trafficking protein particle complex subunit 12
Location	chr08: 5100205 .. 5101719 (-)
RNA-Seq Expression	IVF0012181
Synteny	IVF0012181

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTAAACCACCATTGATCGATGTAATAAGAAAATAGGAAACTGTTGTCGAAGAAGAAGAAGAAGAAGTAGGAAACTGAATCTTTTCGGTCCAACGACTCATCATTCCTCGAGATGGAAACCGAGTCACCCTCACCCTCACCTGACTCTCACTCTCACAGCACTTCCGATCCCGAAACCCTAACAACTGGAATCGAAAATTTGACAATTTCCTCGGACCCTTTAACCACTCAGTTTGGATCCCTCAATGATCTTGCTCACGATCTTTCCTCCCTTCAAGATCTCGCCACTCGCGGTTCATGGCGTTCAATTTTAGATAAGGTTGCCCGAGCACGAGCTCTCTCCCTGCTCCAGAAGCCCCATGACCACCTCACTTACCTATCCTACAATGTCCTTGCCCTCGTCAAACTCCGCCGTTTCGCCGAAGCCTTGGCGGAACTTGATTCTCTCGAAGATCTCAATAGCTCTCAATACAGGTATGAATCCTATCCTAGCGTGTACCCTAATCGAACCGGCTCCATGGTTCCTTTTTCACTTCGGTGGCTGCACGCGCTAATCCCCATCAAAATGGGTGAGCGTCAAGATGGGTTGGATCGGTTCTACGAACTTCTGGATTTTGTACAGTCAAAATTAAAGGATAAAGAGGAGAAAAAGCTCGATGTCTCTGTGAACTTGTGGAAGAAAAGGGAAGTGTTTGTGATTAATTGTATTATTGGTCATCATTTAAGTAACAAGGAGTTTGGGGTTTGTTTAACTTTGATCAATAATTTGTTAAGTGAGGATTTCTCAGATCCTGCTCTGATATCGAAACTTGGGTATATACAAATGCACGCTGGTGATATTGAAGGAGCTAAACGTTCGTTTAATCGGATTGAGGAGTTGGTTAAAGAGGGGAAAAGTAGTGGGTCATTAAGCGAAGTAGAGATTAAGAACCTTGTGAATAGGAACAAGGCGTTGGTGTTTTTGGTGGGTAAGGACTATCTATCAGCTGTGAGGGAATATGAGGAGTGTATTGAGAGGGATAATTCGGACATGGTGGCTATTAACAATAAGGCTCTTTGCTTGATGTACTTGCGGGATTTAGCAGATTCGATTAAGGTGCTTGAAAATGCACTGGAAAGAGTTCCGACTGTGGCTCTCAATGAGACAGTGATCGTGAATCTGTGTAGTATGTATGAATTGGCTTATGTCAATCACTCTGAGATTAAGAGAACGCTCAATAACTGGATTGCCCGTGTTGCTCCTGATGATTTTGATTCTTCGAGTACCCGAATTTAAGTTTGTGTGTATGATTTTGGTATTACAATACCTTATGCATCCGTGCCCCCACATTTTTAACCCATGTGGGTTTTGAGTTTTATCCCTTGTATCAAAATCTATTCCTCTTTATTGGGTGTCACCTGAAATTCATCATGATACTGGTTCTCATTCACATGCCTCTTTATTCTACTGTGATAAGTTGTTTATAGCTTATGAGTTGCCTTTTAGAATGGTCTGGTAAATTGTTAGTGCCATG

mRNA sequence

ATGTAAACCACCATTGATCGATGTAATAAGAAAATAGGAAACTGTTGTCGAAGAAGAAGAAGAAGAAGTAGGAAACTGAATCTTTTCGGTCCAACGACTCATCATTCCTCGAGATGGAAACCGAGTCACCCTCACCCTCACCTGACTCTCACTCTCACAGCACTTCCGATCCCGAAACCCTAACAACTGGAATCGAAAATTTGACAATTTCCTCGGACCCTTTAACCACTCAGTTTGGATCCCTCAATGATCTTGCTCACGATCTTTCCTCCCTTCAAGATCTCGCCACTCGCGGTTCATGGCGTTCAATTTTAGATAAGGTTGCCCGAGCACGAGCTCTCTCCCTGCTCCAGAAGCCCCATGACCACCTCACTTACCTATCCTACAATGTCCTTGCCCTCGTCAAACTCCGCCGTTTCGCCGAAGCCTTGGCGGAACTTGATTCTCTCGAAGATCTCAATAGCTCTCAATACAGGTATGAATCCTATCCTAGCGTGTACCCTAATCGAACCGGCTCCATGGTTCCTTTTTCACTTCGGTGGCTGCACGCGCTAATCCCCATCAAAATGGGTGAGCGTCAAGATGGGTTGGATCGGTTCTACGAACTTCTGGATTTTGTACAGTCAAAATTAAAGGATAAAGAGGAGAAAAAGCTCGATGTCTCTGTGAACTTGTGGAAGAAAAGGGAAGTGTTTGTGATTAATTGTATTATTGGTCATCATTTAAGTAACAAGGAGTTTGGGGTTTGTTTAACTTTGATCAATAATTTGTTAAGTGAGGATTTCTCAGATCCTGCTCTGATATCGAAACTTGGGTATATACAAATGCACGCTGGTGATATTGAAGGAGCTAAACGTTCGTTTAATCGGATTGAGGAGTTGGTTAAAGAGGGGAAAAGTAGTGGGTCATTAAGCGAAGTAGAGATTAAGAACCTTGTGAATAGGAACAAGGCGTTGGTGTTTTTGGTGGGTAAGGACTATCTATCAGCTGTGAGGGAATATGAGGAGTGTATTGAGAGGGATAATTCGGACATGGTGGCTATTAACAATAAGGCTCTTTGCTTGATGTACTTGCGGGATTTAGCAGATTCGATTAAGGTGCTTGAAAATGCACTGGAAAGAGTTCCGACTGTGGCTCTCAATGAGACAGTGATCGTGAATCTGTGTAGTATGTATGAATTGGCTTATGTCAATCACTCTGAGATTAAGAGAACGCTCAATAACTGGATTGCCCGTGTTGCTCCTGATGATTTTGATTCTTCGAGTACCCGAATTTAAGTTTGTGTGTATGATTTTGGTATTACAATACCTTATGCATCCGTGCCCCCACATTTTTAACCCATGTGGGTTTTGAGTTTTATCCCTTGTATCAAAATCTATTCCTCTTTATTGGGTGTCACCTGAAATTCATCATGATACTGGTTCTCATTCACATGCCTCTTTATTCTACTGTGATAAGTTGTTTATAGCTTATGAGTTGCCTTTTAGAATGGTCTGGTAAATTGTTAGTGCCATG

Coding sequence (CDS)

ATGGAAACCGAGTCACCCTCACCCTCACCTGACTCTCACTCTCACAGCACTTCCGATCCCGAAACCCTAACAACTGGAATCGAAAATTTGACAATTTCCTCGGACCCTTTAACCACTCAGTTTGGATCCCTCAATGATCTTGCTCACGATCTTTCCTCCCTTCAAGATCTCGCCACTCGCGGTTCATGGCGTTCAATTTTAGATAAGGTTGCCCGAGCACGAGCTCTCTCCCTGCTCCAGAAGCCCCATGACCACCTCACTTACCTATCCTACAATGTCCTTGCCCTCGTCAAACTCCGCCGTTTCGCCGAAGCCTTGGCGGAACTTGATTCTCTCGAAGATCTCAATAGCTCTCAATACAGGTATGAATCCTATCCTAGCGTGTACCCTAATCGAACCGGCTCCATGGTTCCTTTTTCACTTCGGTGGCTGCACGCGCTAATCCCCATCAAAATGGGTGAGCGTCAAGATGGGTTGGATCGGTTCTACGAACTTCTGGATTTTGTACAGTCAAAATTAAAGGATAAAGAGGAGAAAAAGCTCGATGTCTCTGTGAACTTGTGGAAGAAAAGGGAAGTGTTTGTGATTAATTGTATTATTGGTCATCATTTAAGTAACAAGGAGTTTGGGGTTTGTTTAACTTTGATCAATAATTTGTTAAGTGAGGATTTCTCAGATCCTGCTCTGATATCGAAACTTGGGTATATACAAATGCACGCTGGTGATATTGAAGGAGCTAAACGTTCGTTTAATCGGATTGAGGAGTTGGTTAAAGAGGGGAAAAGTAGTGGGTCATTAAGCGAAGTAGAGATTAAGAACCTTGTGAATAGGAACAAGGCGTTGGTGTTTTTGGTGGGTAAGGACTATCTATCAGCTGTGAGGGAATATGAGGAGTGTATTGAGAGGGATAATTCGGACATGGTGGCTATTAACAATAAGGCTCTTTGCTTGATGTACTTGCGGGATTTAGCAGATTCGATTAAGGTGCTTGAAAATGCACTGGAAAGAGTTCCGACTGTGGCTCTCAATGAGACAGTGATCGTGAATCTGTGTAGTATGTATGAATTGGCTTATGTCAATCACTCTGAGATTAAGAGAACGCTCAATAACTGGATTGCCCGTGTTGCTCCTGATGATTTTGATTCTTCGAGTACCCGAATTTAA

Protein sequence

METESPSPSPDSHSHSTSDPETLTTGIENLTISSDPLTTQFGSLNDLAHDLSSLQDLATRGSWRSILDKVARARALSLLQKPHDHLTYLSYNVLALVKLRRFAEALAELDSLEDLNSSQYRYESYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYELLDFVQSKLKDKEEKKLDVSVNLWKKREVFVINCIIGHHLSNKEFGVCLTLINNLLSEDFSDPALISKLGYIQMHAGDIEGAKRSFNRIEELVKEGKSSGSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIERDNSDMVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSEIKRTLNNWIARVAPDDFDSSSTRI

Homology

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BLAST of IVF0012181 vs. ExPASy Swiss-Prot
Match: Q8WVT3 (Trafficking protein particle complex subunit 12 OS=Homo sapiens OX=9606 GN=TRAPPC12 PE=1 SV=3)

HSP 1 Score: 133.7 bits (335), Expect = 4.6e-30
Identity = 100/357 (28.01%), Postives = 172/357 (48.18%), Query Frame = 0


Query: 54  LQDLATRGSWRSILDKVAR---------ARALSLLQKPHDHLTYLSYNVLALVKLRRFAE 113
           L+ L +  +WR+ +D   R          ++  L     D L      +  LVKL  F  
Sbjct: 384 LKQLISCRNWRAAVDLCGRLLTAHGQGYGKSGLLTSHTTDSLQLWFVRLALLVKLGLFQN 443

Query: 114 ALAELDSLEDLNSSQYRYESYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYE 173
           A  E +   +L+     YE YP VYP R GSMVPFS+R LHA +   +G  Q+ LDR ++
Sbjct: 444 AEMEFEPFGNLDQPDLYYEYYPHVYPGRRGSMVPFSMRILHAELQQYLGNPQESLDRLHK 503

Query: 174 LLDFVQSKLKDKE-------------EKKLDVSVNLWKKREVFVINCIIGHHLSNKEFGV 233
           +       L + E             ++    S+ LW+ R   V+  +    L  K++ +
Sbjct: 504 VKTVCSKILANLEQGLAEDGGMSSVTQEGRQASIRLWRSRLGRVMYSMANCLLLMKDYVL 563

Query: 234 CLTLINNLLS-EDFSDPALISKLGYIQMHAGDIEGAKRSFNRIEELVKEGKSSGSLSEVE 293
            +   ++++      +P L+S +G I +  GDI+ A++ F  +E++ ++      L  ++
Sbjct: 564 AVEAYHSVIKYYPEQEPQLLSGIGRISLQIGDIKTAEKYFQDVEKVTQK------LDGLQ 623

Query: 294 IKNLVNRNKALVFLVGKDYLSAVREYEECIERDNSDMVAINNKALCLMYLRDLADSIKVL 353
            K +V  N A + L   ++  A R + E +  D  + VA NN A+CL+YL  L DS++ L
Sbjct: 624 GKIMVLMNSAFLHLGQNNFAEAHRFFTEILRMDPRNAVANNNAAVCLLYLGKLKDSLRQL 683

Query: 354 ENALERVPTVALNETVIVNLCSMYELAYVNHSEIKRTLNNWIARVAPDDFDSSSTRI 388
           E  +++ P   L+E+V+ NL +MYEL      + K+ L   +A    D F++   ++
Sbjct: 684 EAMVQQDPRHYLHESVLFNLTTMYELESSRSMQKKQALLEAVAGKEGDSFNTQCLKL 734

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BLAST of IVF0012181 vs. ExPASy Swiss-Prot
Match: Q8K2L8 (Trafficking protein particle complex subunit 12 OS=Mus musculus OX=10090 GN=Trappc12 PE=1 SV=2)

HSP 1 Score: 133.3 bits (334), Expect = 6.0e-30
Identity = 104/360 (28.89%), Postives = 175/360 (48.61%), Query Frame = 0


Query: 54  LQDLATRGSWRSILDKVAR-------ARALSLLQKPH--DHLTYLSYNVLALVKLRRFAE 113
           L+ L +  +WR+ +D   R           + L   H  D L      +  LVKL  F  
Sbjct: 446 LKQLISCRNWRAAVDLCGRLLTAHGQGYGKNGLPTSHTTDSLQLWFVRLALLVKLGLFQN 505

Query: 114 ALAELDSLEDLNSSQYRYESYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYE 173
           A  E +   +L+     YE YP VYP R GSMVPFS+R LHA +   +G  Q+ LDR + 
Sbjct: 506 AEMEFEPFGNLDQPDLYYEYYPHVYPGRRGSMVPFSMRILHAELQQYLGNPQESLDRLHR 565

Query: 174 LLDFVQSKLKDKE-------------EKKLDVSVNLWKKREVFVINCIIGHHLSNKEFGV 233
           +       L + E             ++    SV LW+ R   V+  +    L  K++ +
Sbjct: 566 VKTVCSKILANLEQGLAEDGGLSSVTQESRQASVQLWRSRLGRVLYSMANCLLLMKDYVL 625

Query: 234 C----LTLINNLLSEDFSDPALISKLGYIQMHAGDIEGAKRSFNRIEELVKEGKSSGSLS 293
                LT+I     +   +P L+S +G I +  GDI+ A++ F  +E++ ++      L 
Sbjct: 626 AVDAYLTVIKYYPEQ---EPQLLSGIGRILLQIGDIKTAEKYFQDVEKVTQK------LD 685

Query: 294 EVEIKNLVNRNKALVFLVGKDYLSAVREYEECIERDNSDMVAINNKALCLMYLRDLADSI 353
            ++ K +V  N+A ++L   ++  A + + E +  D ++ VA NN A+CL+YL  L DS+
Sbjct: 686 GLQGKIMVLMNRAFLYLGQNNFAEAHKFFTEILRMDPTNAVANNNAAVCLLYLGKLKDSL 745

Query: 354 KVLENALERVPTVALNETVIVNLCSMYELAYVNHSEIKRTLNNWIARVAPDDFDSSSTRI 388
           + LE  +++ P   L+E+V+ NL +MYEL      + K++L   +A    D F++   ++
Sbjct: 746 RQLEAMVQQDPRHYLHESVLFNLTTMYELESSRSMQKKQSLLEAVASKEGDSFNTQCLKL 796

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BLAST of IVF0012181 vs. ExPASy TrEMBL
Match: A0A5A7SYI2 (Trafficking protein particle complex subunit 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002640 PE=4 SV=1)

HSP 1 Score: 753.1 bits (1943), Expect = 5.9e-214
Identity = 387/387 (100.00%), Postives = 387/387 (100.00%), Query Frame = 0


Query: 1   METESPSPSPDSHSHSTSDPETLTTGIENLTISSDPLTTQFGSLNDLAHDLSSLQDLATR 60
           METESPSPSPDSHSHSTSDPETLTTGIENLTISSDPLTTQFGSLNDLAHDLSSLQDLATR
Sbjct: 1   METESPSPSPDSHSHSTSDPETLTTGIENLTISSDPLTTQFGSLNDLAHDLSSLQDLATR 60

Query: 61  GSWRSILDKVARARALSLLQKPHDHLTYLSYNVLALVKLRRFAEALAELDSLEDLNSSQY 120
           GSWRSILDKVARARALSLLQKPHDHLTYLSYNVLALVKLRRFAEALAELDSLEDLNSSQY
Sbjct: 61  GSWRSILDKVARARALSLLQKPHDHLTYLSYNVLALVKLRRFAEALAELDSLEDLNSSQY 120

Query: 121 RYESYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYELLDFVQSKLKDKEEKK 180
           RYESYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYELLDFVQSKLKDKEEKK
Sbjct: 121 RYESYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYELLDFVQSKLKDKEEKK 180

Query: 181 LDVSVNLWKKREVFVINCIIGHHLSNKEFGVCLTLINNLLSEDFSDPALISKLGYIQMHA 240
           LDVSVNLWKKREVFVINCIIGHHLSNKEFGVCLTLINNLLSEDFSDPALISKLGYIQMHA
Sbjct: 181 LDVSVNLWKKREVFVINCIIGHHLSNKEFGVCLTLINNLLSEDFSDPALISKLGYIQMHA 240

Query: 241 GDIEGAKRSFNRIEELVKEGKSSGSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECI 300
           GDIEGAKRSFNRIEELVKEGKSSGSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECI
Sbjct: 241 GDIEGAKRSFNRIEELVKEGKSSGSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECI 300

Query: 301 ERDNSDMVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVN 360
           ERDNSDMVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVN
Sbjct: 301 ERDNSDMVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVN 360

Query: 361 HSEIKRTLNNWIARVAPDDFDSSSTRI 388
           HSEIKRTLNNWIARVAPDDFDSSSTRI
Sbjct: 361 HSEIKRTLNNWIARVAPDDFDSSSTRI 387

[Close]

BLAST of IVF0012181 vs. ExPASy TrEMBL
Match: A0A1S4DUA2 (trafficking protein particle complex subunit 12 OS=Cucumis melo OX=3656 GN=LOC103484996 PE=4 SV=1)

HSP 1 Score: 753.1 bits (1943), Expect = 5.9e-214
Identity = 387/387 (100.00%), Postives = 387/387 (100.00%), Query Frame = 0


Query: 1   METESPSPSPDSHSHSTSDPETLTTGIENLTISSDPLTTQFGSLNDLAHDLSSLQDLATR 60
           METESPSPSPDSHSHSTSDPETLTTGIENLTISSDPLTTQFGSLNDLAHDLSSLQDLATR
Sbjct: 1   METESPSPSPDSHSHSTSDPETLTTGIENLTISSDPLTTQFGSLNDLAHDLSSLQDLATR 60

Query: 61  GSWRSILDKVARARALSLLQKPHDHLTYLSYNVLALVKLRRFAEALAELDSLEDLNSSQY 120
           GSWRSILDKVARARALSLLQKPHDHLTYLSYNVLALVKLRRFAEALAELDSLEDLNSSQY
Sbjct: 61  GSWRSILDKVARARALSLLQKPHDHLTYLSYNVLALVKLRRFAEALAELDSLEDLNSSQY 120

Query: 121 RYESYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYELLDFVQSKLKDKEEKK 180
           RYESYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYELLDFVQSKLKDKEEKK
Sbjct: 121 RYESYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYELLDFVQSKLKDKEEKK 180

Query: 181 LDVSVNLWKKREVFVINCIIGHHLSNKEFGVCLTLINNLLSEDFSDPALISKLGYIQMHA 240
           LDVSVNLWKKREVFVINCIIGHHLSNKEFGVCLTLINNLLSEDFSDPALISKLGYIQMHA
Sbjct: 181 LDVSVNLWKKREVFVINCIIGHHLSNKEFGVCLTLINNLLSEDFSDPALISKLGYIQMHA 240

Query: 241 GDIEGAKRSFNRIEELVKEGKSSGSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECI 300
           GDIEGAKRSFNRIEELVKEGKSSGSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECI
Sbjct: 241 GDIEGAKRSFNRIEELVKEGKSSGSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECI 300

Query: 301 ERDNSDMVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVN 360
           ERDNSDMVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVN
Sbjct: 301 ERDNSDMVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVN 360

Query: 361 HSEIKRTLNNWIARVAPDDFDSSSTRI 388
           HSEIKRTLNNWIARVAPDDFDSSSTRI
Sbjct: 361 HSEIKRTLNNWIARVAPDDFDSSSTRI 387

[Close]

BLAST of IVF0012181 vs. ExPASy TrEMBL
Match: A0A0A0KGA7 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G500620 PE=4 SV=1)

HSP 1 Score: 736.5 bits (1900), Expect = 5.7e-209
Identity = 379/387 (97.93%), Postives = 381/387 (98.45%), Query Frame = 0


Query: 1   METESPSPSPDSHSHSTSDPETLTTGIENLTISSDPLTTQFGSLNDLAHDLSSLQDLATR 60
           METESPSPSPDSHSHSTSDPETLTTG ENL ISSDPLTTQFGSLNDLAHDL SLQDLATR
Sbjct: 1   METESPSPSPDSHSHSTSDPETLTTGFENLAISSDPLTTQFGSLNDLAHDLFSLQDLATR 60

Query: 61  GSWRSILDKVARARALSLLQKPHDHLTYLSYNVLALVKLRRFAEALAELDSLEDLNSSQY 120
           GSWRSILDKVARARAL+LLQKPHDHLTYLSYNVLALVKLRRFAEALAELDSLEDLNSSQY
Sbjct: 61  GSWRSILDKVARARALTLLQKPHDHLTYLSYNVLALVKLRRFAEALAELDSLEDLNSSQY 120

Query: 121 RYESYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYELLDFVQSKLKDKEEKK 180
           RYESYPSVYPNRTGSMVPFSLRWL ALIPIKMGERQ GLDRFYELLDFVQSKLKDKEEKK
Sbjct: 121 RYESYPSVYPNRTGSMVPFSLRWLQALIPIKMGERQHGLDRFYELLDFVQSKLKDKEEKK 180

Query: 181 LDVSVNLWKKREVFVINCIIGHHLSNKEFGVCLTLINNLLSEDFSDPALISKLGYIQMHA 240
           LDVSVNLWKKR VFVINCIIGHHLSNKEFGVCLTLINNLLSEDFSDPALISKLGYIQMHA
Sbjct: 181 LDVSVNLWKKRVVFVINCIIGHHLSNKEFGVCLTLINNLLSEDFSDPALISKLGYIQMHA 240

Query: 241 GDIEGAKRSFNRIEELVKEGKSSGSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECI 300
           GDIEGAKRSFNRIEELVKEGKSSGSLSEVE+KNLVNRNKALVFLVGKDYLSAVREYEECI
Sbjct: 241 GDIEGAKRSFNRIEELVKEGKSSGSLSEVEMKNLVNRNKALVFLVGKDYLSAVREYEECI 300

Query: 301 ERDNSDMVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVN 360
           ERDNSDMVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVN
Sbjct: 301 ERDNSDMVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVN 360

Query: 361 HSEIKRTLNNWIARVAPDDFDSSSTRI 388
           HSEIKRTLNNWIARVAPDDFDSSSTRI
Sbjct: 361 HSEIKRTLNNWIARVAPDDFDSSSTRI 387

[Close]

BLAST of IVF0012181 vs. ExPASy TrEMBL
Match: A0A6J1HII0 (trafficking protein particle complex subunit 12 OS=Cucurbita moschata OX=3662 GN=LOC111463298 PE=4 SV=1)

HSP 1 Score: 687.6 bits (1773), Expect = 3.1e-194
Identity = 350/384 (91.15%), Postives = 372/384 (96.88%), Query Frame = 0


Query: 4   ESPSPSPDSHSHSTSDPETLTTGIENLTISSDPLTTQFGSLNDLAHDLSSLQDLATRGSW 63
           ES SPSPDS +H TSDPETLT+ IE LTISSDPLT++F SL+DLAH+LSSLQDLATRGSW
Sbjct: 2   ESESPSPDSGTHRTSDPETLTSAIEGLTISSDPLTSKFSSLDDLAHELSSLQDLATRGSW 61

Query: 64  RSILDKVARARALSLLQKPHDHLTYLSYNVLALVKLRRFAEALAELDSLEDLNSSQYRYE 123
           RSILDKVARAR+LSLLQKPHDHLTYLSYNVLALVKLRRFAE LAELDSLEDL+SSQYRYE
Sbjct: 62  RSILDKVARARSLSLLQKPHDHLTYLSYNVLALVKLRRFAEGLAELDSLEDLDSSQYRYE 121

Query: 124 SYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYELLDFVQSKLKDKEEKKLDV 183
           +YPSVYPNRTGSMVPFSLRWLHALIPIKMGERQ+GLDRFYELLDFVQSK+KDK+EK LDV
Sbjct: 122 TYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYELLDFVQSKVKDKQEKNLDV 181

Query: 184 SVNLWKKREVFVINCIIGHHLSNKEFGVCLTLINNLLSEDFSDPALISKLGYIQMHAGDI 243
           SV+LWKKREVFVINCI+GHHLSNKEFGVCL+LI+NLLS DFSDPALISKLGYIQMH GDI
Sbjct: 182 SVDLWKKREVFVINCIMGHHLSNKEFGVCLSLIDNLLSRDFSDPALISKLGYIQMHVGDI 241

Query: 244 EGAKRSFNRIEELVKEGKSSGSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIERD 303
           EGAKRSFN+IE++VKEGKSS SLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIERD
Sbjct: 242 EGAKRSFNKIEDMVKEGKSSVSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIERD 301

Query: 304 NSDMVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSE 363
           ++D+VAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSE
Sbjct: 302 HTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSE 361

Query: 364 IKRTLNNWIARVAPDDFDSSSTRI 388
           IKRTLNNWIARVAPDDFDSS TRI
Sbjct: 362 IKRTLNNWIARVAPDDFDSSCTRI 385

[Close]

BLAST of IVF0012181 vs. ExPASy TrEMBL
Match: A0A6J1KTF6 (trafficking protein particle complex subunit 12 OS=Cucurbita maxima OX=3661 GN=LOC111497457 PE=4 SV=1)

HSP 1 Score: 682.9 bits (1761), Expect = 7.5e-193
Identity = 348/384 (90.62%), Postives = 370/384 (96.35%), Query Frame = 0


Query: 4   ESPSPSPDSHSHSTSDPETLTTGIENLTISSDPLTTQFGSLNDLAHDLSSLQDLATRGSW 63
           ES SPSPDS +H TSDPETLT+ IE LTISSDPLT++F SL+DLAH+LSSLQDLATRGSW
Sbjct: 2   ESESPSPDSGTHRTSDPETLTSAIEGLTISSDPLTSKFSSLDDLAHELSSLQDLATRGSW 61

Query: 64  RSILDKVARARALSLLQKPHDHLTYLSYNVLALVKLRRFAEALAELDSLEDLNSSQYRYE 123
           RSILDKVARAR+LSLLQKPHDHLTYLSYNVLALVKLRRFAE LAELDSLEDL+SSQYRYE
Sbjct: 62  RSILDKVARARSLSLLQKPHDHLTYLSYNVLALVKLRRFAEGLAELDSLEDLDSSQYRYE 121

Query: 124 SYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYELLDFVQSKLKDKEEKKLDV 183
           +YP VYPNRTGSMVPFSLRWLHALIPIKMGERQ+GLDRFYELLDFVQSK+KDK+EK LDV
Sbjct: 122 TYPIVYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYELLDFVQSKVKDKQEKNLDV 181

Query: 184 SVNLWKKREVFVINCIIGHHLSNKEFGVCLTLINNLLSEDFSDPALISKLGYIQMHAGDI 243
           SV+LWKKREVFVINCI+GHHLSNKEFGVCL+LI+NLLS DFSDPALISKLGYIQMH GDI
Sbjct: 182 SVDLWKKREVFVINCIMGHHLSNKEFGVCLSLIDNLLSRDFSDPALISKLGYIQMHVGDI 241

Query: 244 EGAKRSFNRIEELVKEGKSSGSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIERD 303
           EGAKRSFN+IE++VKEGKSS SLSEVEIKNLVNRNKALVFLV KDYLSAVREYEECIERD
Sbjct: 242 EGAKRSFNKIEDMVKEGKSSVSLSEVEIKNLVNRNKALVFLVSKDYLSAVREYEECIERD 301

Query: 304 NSDMVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSE 363
           ++D+VAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSE
Sbjct: 302 HTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSE 361

Query: 364 IKRTLNNWIARVAPDDFDSSSTRI 388
           IKRTLNNWIARVAPDDFDSS TRI
Sbjct: 362 IKRTLNNWIARVAPDDFDSSCTRI 385

[Close]

BLAST of IVF0012181 vs. NCBI nr
Match: XP_016899300.1 (PREDICTED: trafficking protein particle complex subunit 12 [Cucumis melo] >KAA0036282.1 trafficking protein particle complex subunit 12 [Cucumis melo var. makuwa] >TYK12676.1 trafficking protein particle complex subunit 12 [Cucumis melo var. makuwa])

HSP 1 Score: 750 bits (1936), Expect = 9.61e-273
Identity = 387/387 (100.00%), Postives = 387/387 (100.00%), Query Frame = 0


Query: 1   METESPSPSPDSHSHSTSDPETLTTGIENLTISSDPLTTQFGSLNDLAHDLSSLQDLATR 60
           METESPSPSPDSHSHSTSDPETLTTGIENLTISSDPLTTQFGSLNDLAHDLSSLQDLATR
Sbjct: 1   METESPSPSPDSHSHSTSDPETLTTGIENLTISSDPLTTQFGSLNDLAHDLSSLQDLATR 60

Query: 61  GSWRSILDKVARARALSLLQKPHDHLTYLSYNVLALVKLRRFAEALAELDSLEDLNSSQY 120
           GSWRSILDKVARARALSLLQKPHDHLTYLSYNVLALVKLRRFAEALAELDSLEDLNSSQY
Sbjct: 61  GSWRSILDKVARARALSLLQKPHDHLTYLSYNVLALVKLRRFAEALAELDSLEDLNSSQY 120

Query: 121 RYESYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYELLDFVQSKLKDKEEKK 180
           RYESYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYELLDFVQSKLKDKEEKK
Sbjct: 121 RYESYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYELLDFVQSKLKDKEEKK 180

Query: 181 LDVSVNLWKKREVFVINCIIGHHLSNKEFGVCLTLINNLLSEDFSDPALISKLGYIQMHA 240
           LDVSVNLWKKREVFVINCIIGHHLSNKEFGVCLTLINNLLSEDFSDPALISKLGYIQMHA
Sbjct: 181 LDVSVNLWKKREVFVINCIIGHHLSNKEFGVCLTLINNLLSEDFSDPALISKLGYIQMHA 240

Query: 241 GDIEGAKRSFNRIEELVKEGKSSGSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECI 300
           GDIEGAKRSFNRIEELVKEGKSSGSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECI
Sbjct: 241 GDIEGAKRSFNRIEELVKEGKSSGSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECI 300

Query: 301 ERDNSDMVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVN 360
           ERDNSDMVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVN
Sbjct: 301 ERDNSDMVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVN 360

Query: 361 HSEIKRTLNNWIARVAPDDFDSSSTRI 387
           HSEIKRTLNNWIARVAPDDFDSSSTRI
Sbjct: 361 HSEIKRTLNNWIARVAPDDFDSSSTRI 387

[Close]

BLAST of IVF0012181 vs. NCBI nr
Match: XP_004143481.1 (trafficking protein particle complex subunit 12 [Cucumis sativus] >KGN48770.1 hypothetical protein Csa_004032 [Cucumis sativus])

HSP 1 Score: 733 bits (1893), Expect = 3.44e-266
Identity = 379/387 (97.93%), Postives = 381/387 (98.45%), Query Frame = 0


Query: 1   METESPSPSPDSHSHSTSDPETLTTGIENLTISSDPLTTQFGSLNDLAHDLSSLQDLATR 60
           METESPSPSPDSHSHSTSDPETLTTG ENL ISSDPLTTQFGSLNDLAHDL SLQDLATR
Sbjct: 1   METESPSPSPDSHSHSTSDPETLTTGFENLAISSDPLTTQFGSLNDLAHDLFSLQDLATR 60

Query: 61  GSWRSILDKVARARALSLLQKPHDHLTYLSYNVLALVKLRRFAEALAELDSLEDLNSSQY 120
           GSWRSILDKVARARAL+LLQKPHDHLTYLSYNVLALVKLRRFAEALAELDSLEDLNSSQY
Sbjct: 61  GSWRSILDKVARARALTLLQKPHDHLTYLSYNVLALVKLRRFAEALAELDSLEDLNSSQY 120

Query: 121 RYESYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYELLDFVQSKLKDKEEKK 180
           RYESYPSVYPNRTGSMVPFSLRWL ALIPIKMGERQ GLDRFYELLDFVQSKLKDKEEKK
Sbjct: 121 RYESYPSVYPNRTGSMVPFSLRWLQALIPIKMGERQHGLDRFYELLDFVQSKLKDKEEKK 180

Query: 181 LDVSVNLWKKREVFVINCIIGHHLSNKEFGVCLTLINNLLSEDFSDPALISKLGYIQMHA 240
           LDVSVNLWKKR VFVINCIIGHHLSNKEFGVCLTLINNLLSEDFSDPALISKLGYIQMHA
Sbjct: 181 LDVSVNLWKKRVVFVINCIIGHHLSNKEFGVCLTLINNLLSEDFSDPALISKLGYIQMHA 240

Query: 241 GDIEGAKRSFNRIEELVKEGKSSGSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECI 300
           GDIEGAKRSFNRIEELVKEGKSSGSLSEVE+KNLVNRNKALVFLVGKDYLSAVREYEECI
Sbjct: 241 GDIEGAKRSFNRIEELVKEGKSSGSLSEVEMKNLVNRNKALVFLVGKDYLSAVREYEECI 300

Query: 301 ERDNSDMVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVN 360
           ERDNSDMVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVN
Sbjct: 301 ERDNSDMVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVN 360

Query: 361 HSEIKRTLNNWIARVAPDDFDSSSTRI 387
           HSEIKRTLNNWIARVAPDDFDSSSTRI
Sbjct: 361 HSEIKRTLNNWIARVAPDDFDSSSTRI 387

[Close]

BLAST of IVF0012181 vs. NCBI nr
Match: XP_038882977.1 (trafficking protein particle complex subunit 12 [Benincasa hispida])

HSP 1 Score: 704 bits (1818), Expect = 8.57e-255
Identity = 364/387 (94.06%), Postives = 376/387 (97.16%), Query Frame = 0


Query: 1   METESPSPSPDSHSHSTSDPETLTTGIENLTISSDPLTTQFGSLNDLAHDLSSLQDLATR 60
           METE PSP  +SHSH TSD ETLT+GIE LTISSDPLT+QFGSLNDLAH+LSSLQDLA R
Sbjct: 1   METEPPSP--ESHSHRTSDSETLTSGIEELTISSDPLTSQFGSLNDLAHELSSLQDLAAR 60

Query: 61  GSWRSILDKVARARALSLLQKPHDHLTYLSYNVLALVKLRRFAEALAELDSLEDLNSSQY 120
           GSWRSILDKVARAR+LSLLQKPHDHL YLSYNVLALVKLRRFAEALAELDSLEDL+SSQY
Sbjct: 61  GSWRSILDKVARARSLSLLQKPHDHLIYLSYNVLALVKLRRFAEALAELDSLEDLDSSQY 120

Query: 121 RYESYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYELLDFVQSKLKDKEEKK 180
           RYESYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYELLDFVQSK+KDKEEK 
Sbjct: 121 RYESYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYELLDFVQSKVKDKEEKN 180

Query: 181 LDVSVNLWKKREVFVINCIIGHHLSNKEFGVCLTLINNLLSEDFSDPALISKLGYIQMHA 240
           LDVSVNLWKKR VFVINCIIGHHLSNKEFGVCLTL+NNLLSEDFSDPALISKLGYIQMH 
Sbjct: 181 LDVSVNLWKKRVVFVINCIIGHHLSNKEFGVCLTLMNNLLSEDFSDPALISKLGYIQMHV 240

Query: 241 GDIEGAKRSFNRIEELVKEGKSSGSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECI 300
           GDIEGAKRSFN+IEE+VKEGKSSGSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECI
Sbjct: 241 GDIEGAKRSFNQIEEMVKEGKSSGSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECI 300

Query: 301 ERDNSDMVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVN 360
           ERD+SD+VAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVN
Sbjct: 301 ERDDSDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVN 360

Query: 361 HSEIKRTLNNWIARVAPDDFDSSSTRI 387
           HSEIKRTLNNWIARVAPDDFDSSSTRI
Sbjct: 361 HSEIKRTLNNWIARVAPDDFDSSSTRI 385

[Close]

BLAST of IVF0012181 vs. NCBI nr
Match: XP_022962944.1 (trafficking protein particle complex subunit 12 [Cucurbita moschata])

HSP 1 Score: 685 bits (1767), Expect = 5.06e-247
Identity = 350/384 (91.15%), Postives = 372/384 (96.88%), Query Frame = 0


Query: 4   ESPSPSPDSHSHSTSDPETLTTGIENLTISSDPLTTQFGSLNDLAHDLSSLQDLATRGSW 63
           ES SPSPDS +H TSDPETLT+ IE LTISSDPLT++F SL+DLAH+LSSLQDLATRGSW
Sbjct: 2   ESESPSPDSGTHRTSDPETLTSAIEGLTISSDPLTSKFSSLDDLAHELSSLQDLATRGSW 61

Query: 64  RSILDKVARARALSLLQKPHDHLTYLSYNVLALVKLRRFAEALAELDSLEDLNSSQYRYE 123
           RSILDKVARAR+LSLLQKPHDHLTYLSYNVLALVKLRRFAE LAELDSLEDL+SSQYRYE
Sbjct: 62  RSILDKVARARSLSLLQKPHDHLTYLSYNVLALVKLRRFAEGLAELDSLEDLDSSQYRYE 121

Query: 124 SYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYELLDFVQSKLKDKEEKKLDV 183
           +YPSVYPNRTGSMVPFSLRWLHALIPIKMGERQ+GLDRFYELLDFVQSK+KDK+EK LDV
Sbjct: 122 TYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYELLDFVQSKVKDKQEKNLDV 181

Query: 184 SVNLWKKREVFVINCIIGHHLSNKEFGVCLTLINNLLSEDFSDPALISKLGYIQMHAGDI 243
           SV+LWKKREVFVINCI+GHHLSNKEFGVCL+LI+NLLS DFSDPALISKLGYIQMH GDI
Sbjct: 182 SVDLWKKREVFVINCIMGHHLSNKEFGVCLSLIDNLLSRDFSDPALISKLGYIQMHVGDI 241

Query: 244 EGAKRSFNRIEELVKEGKSSGSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIERD 303
           EGAKRSFN+IE++VKEGKSS SLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIERD
Sbjct: 242 EGAKRSFNKIEDMVKEGKSSVSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIERD 301

Query: 304 NSDMVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSE 363
           ++D+VAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSE
Sbjct: 302 HTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSE 361

Query: 364 IKRTLNNWIARVAPDDFDSSSTRI 387
           IKRTLNNWIARVAPDDFDSS TRI
Sbjct: 362 IKRTLNNWIARVAPDDFDSSCTRI 385

[Close]

BLAST of IVF0012181 vs. NCBI nr
Match: KAG6594864.1 (Trafficking protein particle complex subunit 12, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 685 bits (1767), Expect = 5.06e-247
Identity = 350/384 (91.15%), Postives = 371/384 (96.61%), Query Frame = 0


Query: 4   ESPSPSPDSHSHSTSDPETLTTGIENLTISSDPLTTQFGSLNDLAHDLSSLQDLATRGSW 63
           ES  PSPDS +H TSDPETLT+ IE LTISSDPLT++F SL+DLAH+LSSLQDLATRGSW
Sbjct: 2   ESELPSPDSGTHRTSDPETLTSAIEGLTISSDPLTSKFSSLDDLAHELSSLQDLATRGSW 61

Query: 64  RSILDKVARARALSLLQKPHDHLTYLSYNVLALVKLRRFAEALAELDSLEDLNSSQYRYE 123
           RSILDKVARAR+LSLLQKPHDHLTYLSYNVLALVKLRRFAE LAELDSLEDL+SSQYRYE
Sbjct: 62  RSILDKVARARSLSLLQKPHDHLTYLSYNVLALVKLRRFAEGLAELDSLEDLDSSQYRYE 121

Query: 124 SYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYELLDFVQSKLKDKEEKKLDV 183
           +YPSVYPNRTGSMVPFSLRWLHALIPIKMGERQ+GLDRFYELLDFVQSKLKDK+EK LDV
Sbjct: 122 TYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYELLDFVQSKLKDKQEKNLDV 181

Query: 184 SVNLWKKREVFVINCIIGHHLSNKEFGVCLTLINNLLSEDFSDPALISKLGYIQMHAGDI 243
           SV+LWKKREVFVINCI+GHHLSNKEFGVCL+LI+NLLS DFSDPALISKLGYIQMH GDI
Sbjct: 182 SVDLWKKREVFVINCIMGHHLSNKEFGVCLSLIDNLLSRDFSDPALISKLGYIQMHVGDI 241

Query: 244 EGAKRSFNRIEELVKEGKSSGSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIERD 303
           EGAKRSFN+IE++VKEGKSS SLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIERD
Sbjct: 242 EGAKRSFNKIEDMVKEGKSSASLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIERD 301

Query: 304 NSDMVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSE 363
           ++D+VAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSE
Sbjct: 302 HTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSE 361

Query: 364 IKRTLNNWIARVAPDDFDSSSTRI 387
           IKRTLNNWIARVAPDDFDSS TRI
Sbjct: 362 IKRTLNNWIARVAPDDFDSSCTRI 385

[Close]

BLAST of IVF0012181 vs. TAIR 10
Match: AT4G39820.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 493.4 bits (1269), Expect = 1.6e-139
Identity = 235/376 (62.50%), Postives = 306/376 (81.38%), Query Frame = 0


Query: 12  SHSHSTSDPETLTTGIENLTISSDPLTTQFGSLNDLAHDLSSLQDLATRGSWRSILDKVA 71
           + S    +P         +T  +D    +F SL++L HDL SL +L+TRGSW++IL+K++
Sbjct: 33  AESTDAGEPTAFELASSQVTSVADLPPERFNSLDELTHDLGSLHELSTRGSWQAILEKIS 92

Query: 72  RARALSLLQKPHDHLTYLSYNVLALVKLRRFAEALAELDSLEDLNSSQYRYESYPSVYPN 131
           +ARAL LL KPH+HLTYL+Y V+AL KLRR  EA  EL+SL D + + YRYES+P +YPN
Sbjct: 93  QARALFLLTKPHEHLTYLTYQVMALAKLRRSDEASHELNSLHDFDGTHYRYESFPEIYPN 152

Query: 132 RTGSMVPFSLRWLHALIPIKMGERQDGLDRFYELLDFVQSKLKDKEEKKLDVSVNLWKKR 191
           R GSMVPFSLRWL+ALIP K+G RQ+GLDR Y LLDFV+ ++++KE + L+ SV LWKKR
Sbjct: 153 RRGSMVPFSLRWLYALIPTKLGNRQEGLDRLYVLLDFVRDRIREKESQSLESSVELWKKR 212

Query: 192 EVFVINCIIGHHLSNKEFGVCLTLINNLLSEDFSDPALISKLGYIQMHAGDIEGAKRSFN 251
           E FV+NC++G HL +KEFGV L L+  L++ D  DP LISKLG +QM  GD+EGAK +F+
Sbjct: 213 ETFVMNCLLGFHLGHKEFGVSLDLMKELINRDPLDPVLISKLGSVQMQFGDVEGAKTTFD 272

Query: 252 RIEELVKEGKSSGSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIERDNSDMVAIN 311
           R+E+++ EGKS+G L+E++  NLV RNKALV++V KDY+SAVREY++CIERDNSD++A+N
Sbjct: 273 RVEKMLNEGKSNGLLNEIQFNNLVGRNKALVYVVAKDYVSAVREYDKCIERDNSDIIAVN 332

Query: 312 NKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSEIKRTLNNW 371
           NKALCLMYLRDL+D+IKV+E+ALERVPT ALNE+++VNLCSMYELAYVNH+++KRTLNNW
Sbjct: 333 NKALCLMYLRDLSDAIKVMESALERVPTAALNESLVVNLCSMYELAYVNHTDVKRTLNNW 392

Query: 372 IARVAPDDFDSSSTRI 388
           IARVAPDDFDSS TR+
Sbjct: 393 IARVAPDDFDSSCTRV 408

The following BLAST results are available for this feature:

BLAST of IVF0012181 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8WVT3	4.6e-30	28.01	Trafficking protein particle complex subunit 12 OS=Homo sapiens OX=9606 GN=TRAPP...	[more]
Q8K2L8	6.0e-30	28.89	Trafficking protein particle complex subunit 12 OS=Mus musculus OX=10090 GN=Trap...	[more]

BLAST of IVF0012181 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SYI2	5.9e-214	100.00	Trafficking protein particle complex subunit 12 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S4DUA2	5.9e-214	100.00	trafficking protein particle complex subunit 12 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0KGA7	5.7e-209	97.93	TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G500620 ...	[more]
A0A6J1HII0	3.1e-194	91.15	trafficking protein particle complex subunit 12 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1KTF6	7.5e-193	90.63	trafficking protein particle complex subunit 12 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of IVF0012181 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016899300.1	9.61e-273	100.00	PREDICTED: trafficking protein particle complex subunit 12 [Cucumis melo] >KAA00...	[more]
XP_004143481.1	3.44e-266	97.93	trafficking protein particle complex subunit 12 [Cucumis sativus] >KGN48770.1 hy...	[more]
XP_038882977.1	8.57e-255	94.06	trafficking protein particle complex subunit 12 [Benincasa hispida]	[more]
XP_022962944.1	5.06e-247	91.15	trafficking protein particle complex subunit 12 [Cucurbita moschata]	[more]
KAG6594864.1	5.06e-247	91.15	Trafficking protein particle complex subunit 12, partial [Cucurbita argyrosperma...	[more]

BLAST of IVF0012181 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39820.1	1.6e-139	62.50	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 159..179
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR21581	D-ALANYL-D-ALANINE CARBOXYPEPTIDASE	coord: 34..386
None	No IPR available	PANTHER	PTHR21581:SF28	F-BOX DOMAIN, TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN PROTEIN-RELATED	coord: 34..386
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 307..340 e-value: 1.6 score: 17.7 coord: 227..260 e-value: 120.0 score: 5.6 coord: 273..306 e-value: 190.0 score: 3.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 202..371 e-value: 2.5E-13 score: 52.1
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 216..342

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0012181.1	IVF0012181.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016740	transferase activity