IVF0012160 (gene) Melon (IVF77) v1

Overview


Name	IVF0012160
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	agamous-like MADS-box protein AGL104
Location	chr07: 21088400 .. 21091917 (+)
RNA-Seq Expression	IVF0012160
Synteny	IVF0012160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAAAGCTTATGAGCTCTCTCCTTCTTGGTGATATTGACATTGCTCTTATTATCTTCTCCCCTTCCGGTCACCTCACCCACTTCTCCGGCCGCCGCAGGTTCTGTACTTCATTATTTTCATATTCATATATTCATATTCATATTGTTATATATATATAATTGTTTCTTTTATCTTTCTTTTTCTTCCAGATCGATTGAGGACGTTCTTGCTCGTTACATATAAATCTTCCTGATCATTATAGAAGAAGGTGATTTCTCTTTTCAATTCTCGGGAAAATTGTTCTAATTTTATGTTGCATTTTTTTTCTTCTAACGGATTAATTTATTCTATGTAGAATAATCAATAAGGGCTGCAGCGTTATTCGTTGTAGGTTTCAATTTCAAATCTTCAATGGTTATCTTTTTAATGGTAGAATAGTTGAAGTAAATTCAAGAACTTTAATTAACGTCCAGACGTTCTTGACCAAAATAAAATTTAAGTTTCTTTTTAATGGAAGGATTAGATTTAAAATTTAATAAACAAATTATGATCTCAGTTCATAGTCGTTATCAAGAATTATGAATTTTGATGCAGTTTTTACTTGGGACACTACGTAATATGAAGATCGAGAATGACATTGCACTCCAACATCTGAAGTAATAAATTAAATCTCTCCTCTCTATTTAATTTCAACAAACATTTATTACATTATTTTTCAAATTTGTTTTTGGTATATGTTCTAATTCTAATGTGTGTTTGTCAATAAACAGTCCTACACCAAGCCACTCCAATAATATTGAGGTAATCATATGATTCTAGTAATACTATATTTGCATAAACTAAATTATTAATGAAACTCTTTTATTGCCATTAGGAGCTTCAACAAGAGATCGATACATTAAGACATGAGCTTCAACTTCTTGAAGACCAACTAAAGTATTTTCTTTCTAAGTCTTCGTTTTTTCCTTCATTATATTATTAGAAGAAATAATACTGACATAACAAAATATGATCATATTCTATTCATAAAAAACTTCTTGATTGATAAGGATGTTTGAACCTGATCCTCTATCGTTCACATCCAAGGATGAAATAAATTCTTGTGAAAAGAATTTGTTGGACACATTGTCAAGAATCACCCAAAGGAAGGTACAATTTTGTTCTTTTTTTTTTGGATATATGGAAGTAACAAATTCATATTAATTATATACAATTTTATTTTTCATTTTATTGAAATTTGAAACTAATTTTTTGTTTTCCTTCAGGACTTATTAAGTAACCACTTATCTCCACCTAATTATGATCATGATCTTAATGAGCTTCAGGTTACTAAAATACACATGAATCATTTCTATACGCTTGTTTGCGAGACACTTTAAAAATAGTAATCTATTTATATATTAGACAACGGTATATAGATAGACTCAATTAATAGATACGTATAGTAGTTTATCTTGATTTATTAATTAATTGCTATAATTTTACTGTATTTGTAATTAAATATTTTCATAAAAAGTTTAGTTATTTAAAAGAGTTTTTGTATTTTTATTTGGGTATTAAAATAGCAATATTTGGATCCAAATGAGGGAATACCAACATCCTTTGAGACCAATGTTGCTAATCGGTTGCCTCAAAATGACCAAAATTCATCTCAAGTTTGTGTTGCATCTCATCACTCATCTTCCATTCCTCGAAGGTATTGTATTTATTTCATAATTATTCTTCTACATTCTAATTTTAGTGAACTAGTTAAATAAAATTATAAAGATCTTAATTGAAGGATTATATTAGTCTAAGTTATGTGATTATGAGAGATATAACTAATCCAATTGCTACCATATTAAGTTGACTATGAACTATCTTACAAAAAGATAATGCGAGGTCTTTTGATTTCTTTAAAAGTAAGATTTTCAATCGATGGAATTATAATATAGTTTTTATACCATTGAGACACACTTTTGTTTGTTTGTTGTATGCAAACTTTATATTGTTTGTTACAAATAATATTTTTCTTTGTAATTAATATGGTTACGTTTTCCGGTGGTCAATATGAAAGAAGCACAATTTATGATAAGGAAGCATCAAACATTAATGTTGGGTCATGCAACATTGTAAGACCCAATAATGTTGATGATGATGATTACCCTCCATGGCGTCATCACAACTACACCACAACTGATCAACTTCTCTCTTCCTTCACCCCACAAACTTCATTTCATACTTCGGATTCAGAGGTTCGTTTGTACCCTCTCTCCAATTTATCAAACCAATATACATCTCTTAAACCATTATAATTTTATCTTTAATGTTGATGTCAAAGACATGGATTAGGCATTTCATGGTCCATCCAATCTACTTCAGACTCAGCTCATAAAGCCATAGATGGCTATTGGTTGGGCATGAGTTTCGTTGGCCTTCATCTACCAACTTGATCAATAATAACATATTTGATCAATATATTTCTTATATGAAAATGGCTAATTGGGTTAGGTCAATAGCATTTTAATTCTAATCAAATGATCTGATCAACATCACCAAGTAATTTTAGGTAGCATTGATTAATTTCAATAGTCTTATGGTTAGGTCAATAACATTTTAATCTTAAACCTAAAATTAAACTTTTTATTGCAATTAGGAGCTTCAACAAGAGGTGGATACATTAACACATGAGCTTCAACTTGCTGAAGAGCAACTAAGGTATTTTTCTAAATCTTCTTTTTATCTTTTTTTTTTACCGTTACTATATCATTAGAAAAATAAATTGATAAGATATAACAAAATATCATATTTTATTAAAAAAAAAAAAAAAAACATTGATGGATTCATATTGATAAACATTAATGTAAGCTTTAATTGATATTGTTTTGATAACTTCTTTTTTAAGTTAACTTAATTGCAAATTTTTTTATTATTTGAAAAAGGTTATTTGAGCCCCATCATCTATCATTCACATTAGAGGATGAAATAGATTCTTGTGAGAAGAACCTGTTGGACACATTGTCAAGAATCACCCAGAGGAAGGTACAATTTTTTTTTTTTTTTTTTTGGATATGGTTACAAATTCATATTAGTTATATACAATTTTATTTTTCATATTATAAATTGAAACTGTGAACTAATCTTTTCTTCCCTTCAGAAAGATTTATTAAGTGACCACTTATCTCTAGCTTATGATCATCTCAGTCTCAATGACATTCAGGTAACTAAAATACACATTACTCATTTATATACATTTGTTTATTTATGAGACATTTTCAAAATAGTAAATAATATAGTAAAATTTATTAAACTCTTCCAAACTTATTTGGATTTTTTAGGTTTCATCGATTAATTTCAACAGAGTCTCGTGGTTTCATGAAAAAATAAAAATTGTGTTGTTGTGTTTAATAGGATGAGATTGAAGAGGGTTGTATGAATACAACGACGTTGCAACAACAAGTTGATAGCATTTCAAATGTGAATCCTCAAAAGCCTCCAAGTACTGATGGAAGTGCCAATTACGATGATGACAATTTGCCTCAATTCAATCTCGATTAA

mRNA sequence

AAGAAAGCTTATGAGCTCTCTCCTTCTTGGTGATATTGACATTGCTCTTATTATCTTCTCCCCTTCCGGTCACCTCACCCACTTCTCCGGCCGCCGCAGATCGATTGAGGACGTTCTTGCTCGTTACATATAAATCTTCCTGATCATTATAGAAGAAGTTTTTACTTGGGACACTACGTAATATGAAGATCGAGAATGACATTGCACTCCAACATCTGAATCCTACACCAAGCCACTCCAATAATATTGAGGAGCTTCAACAAGAGATCGATACATTAAGACATGAGCTTCAACTTCTTGAAGACCAACTAAAGATGTTTGAACCTGATCCTCTATCGTTCACATCCAAGGATGAAATAAATTCTTGTGAAAAGAATTTGTTGGACACATTGTCAAGAATCACCCAAAGGAAGGACTTATTAAGTAACCACTTATCTCCACCTAATTATGATCATGATCTTAATGAGCTTCAGCAATATTTGGATCCAAATGAGGGAATACCAACATCCTTTGAGACCAATGTTGCTAATCGGTTGCCTCAAAATGACCAAAATTCATCTCAAGTTTGTGTTGCATCTCATCACTCATCTTCCATTCCTCGAAGAAGCACAATTTATGATAAGGAAGCATCAAACATTAATGTTGGGTCATGCAACATTGTAAGACCCAATAATGTTGATGATGATGATTACCCTCCATGGCGTCATCACAACTACACCACAACTGATCAACTTCTCTCTTCCTTCACCCCACAAACTTCATTTCATACTTCGGATTCAGAGGATGAGATTGAAGAGGGTTGTATGAATACAACGACGTTGCAACAACAAGTTGATAGCATTTCAAATGTGAATCCTCAAAAGCCTCCAAGTACTGATGGAAGTGCCAATTACGATGATGACAATTTGCCTCAATTCAATCTCGATTAA

Coding sequence (CDS)

ATGAAGATCGAGAATGACATTGCACTCCAACATCTGAATCCTACACCAAGCCACTCCAATAATATTGAGGAGCTTCAACAAGAGATCGATACATTAAGACATGAGCTTCAACTTCTTGAAGACCAACTAAAGATGTTTGAACCTGATCCTCTATCGTTCACATCCAAGGATGAAATAAATTCTTGTGAAAAGAATTTGTTGGACACATTGTCAAGAATCACCCAAAGGAAGGACTTATTAAGTAACCACTTATCTCCACCTAATTATGATCATGATCTTAATGAGCTTCAGCAATATTTGGATCCAAATGAGGGAATACCAACATCCTTTGAGACCAATGTTGCTAATCGGTTGCCTCAAAATGACCAAAATTCATCTCAAGTTTGTGTTGCATCTCATCACTCATCTTCCATTCCTCGAAGAAGCACAATTTATGATAAGGAAGCATCAAACATTAATGTTGGGTCATGCAACATTGTAAGACCCAATAATGTTGATGATGATGATTACCCTCCATGGCGTCATCACAACTACACCACAACTGATCAACTTCTCTCTTCCTTCACCCCACAAACTTCATTTCATACTTCGGATTCAGAGGATGAGATTGAAGAGGGTTGTATGAATACAACGACGTTGCAACAACAAGTTGATAGCATTTCAAATGTGAATCCTCAAAAGCCTCCAAGTACTGATGGAAGTGCCAATTACGATGATGACAATTTGCCTCAATTCAATCTCGATTAA

Protein sequence

MKIENDIALQHLNPTPSHSNNIEELQQEIDTLRHELQLLEDQLKMFEPDPLSFTSKDEINSCEKNLLDTLSRITQRKDLLSNHLSPPNYDHDLNELQQYLDPNEGIPTSFETNVANRLPQNDQNSSQVCVASHHSSSIPRRSTIYDKEASNINVGSCNIVRPNNVDDDDYPPWRHHNYTTTDQLLSSFTPQTSFHTSDSEDEIEEGCMNTTTLQQQVDSISNVNPQKPPSTDGSANYDDDNLPQFNLD

Homology

[Close]

BLAST of IVF0012160 vs. ExPASy Swiss-Prot
Match: Q9LM46 (Agamous-like MADS-box protein AGL104 OS=Arabidopsis thaliana OX=3702 GN=AGL104 PE=1 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.2e-17
Identity = 63/179 (35.20%), Postives = 102/179 (56.98%), Query Frame = 0


Query: 1   MKIENDIALQHLNPTPSHSNNIEELQQEIDTLRHELQLLEDQLKMFEPDPLSFTSKDEIN 60
           +K ENDIALQ  NP   +S ++EEL+ E+  L+ +LQ+ E++L+ +EPDP+ FT+ +E  
Sbjct: 106 LKTENDIALQVTNPAAINS-DVEELEHEVCRLQQQLQMAEEELRRYEPDPIRFTTMEEYE 165

Query: 61  SCEKNLLDTLSRITQRKD-LLSNHLSPPNYDHDLNELQQYLDPNEGIPTSFETNVANRLP 120
             EK LLDTL+ + QR+D L+SNHLS     ++ + +Q    PN G P   +  V   LP
Sbjct: 166 VSEKQLLDTLTHVVQRRDHLMSNHLS----SYEASTMQ----PNIGGPFVNDV-VEGWLP 225

Query: 121 QNDQNSSQVCVASHHSSSIPRRST-----IYDKEASNINVGSCNIVRPNNVDDDDYPPW 174
           +N  N + +  AS HS+ +   S+     +    +S+ N  + +     N + + +P W
Sbjct: 226 ENGTNQTHLFDASAHSNQLRELSSAMYEPLLQGSSSSSNQNNMSECHVTNHNGEMFPEW 274

[Close]

BLAST of IVF0012160 vs. ExPASy Swiss-Prot
Match: Q1PFC2 (Agamous-like MADS-box protein AGL66 OS=Arabidopsis thaliana OX=3702 GN=AGL66 PE=1 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 9.2e-16
Identity = 68/209 (32.54%), Postives = 112/209 (53.59%), Query Frame = 0


Query: 1   MKIENDIALQHLNPTPSHSNNIEELQQEIDTLRHELQLLEDQLKMFEPDPLSFTSKDEIN 60
           +K ENDIALQ  NPT  +S ++EEL+ E+  L+ +L + E++L+ +EPDP+ FT+ +E  
Sbjct: 106 LKAENDIALQLTNPTAINS-DVEELEHEVYKLQQQLLMAEEELRKYEPDPIRFTTMEEYE 165

Query: 61  SCEKNLLDTLSRITQRKDLLSNHLSPPNYDHDLNELQQYLDPNEGIPTSFETNVANRLPQ 120
           +CEK L+DTL+R+ QR++ + +     +Y+    + QQ +    G P   +  V   L +
Sbjct: 166 TCEKQLMDTLTRVNQRREHILSQDQLSSYEASALQQQQSM----GGPFGNDV-VGGWLTE 225

Query: 121 NDQNSSQVCVASHHSSSIPRRSTIYDKEASNINVGSCNIVRPNNVDD---DDYPPW-RHH 180
           N  N + +  AS HS+      T+    +S+ N    NI+  +NV +   D +  W + +
Sbjct: 226 NGPNEAHLFDASAHSAMY---ETLLQGSSSSSNQN--NIMGESNVSNHNGDMFQEWAQAY 285

Query: 181 NYTTTDQLLSSFTPQTSFHTSDSEDEIEE 206
           N TT     + F P    H    +  IEE
Sbjct: 286 NSTTAHNPSTLFPPMQHQHGLVVDPNIEE 303

[Close]

BLAST of IVF0012160 vs. ExPASy TrEMBL
Match: A0A1S3BWJ8 (agamous-like MADS-box protein AGL104 OS=Cucumis melo OX=3656 GN=LOC103494406 PE=4 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 2.1e-127
Identity = 248/323 (76.78%), Postives = 248/323 (76.78%), Query Frame = 0


Query: 1   MKIENDIALQHLNPTPSHSNNIEELQQEIDTLRHELQLLEDQLKMFEPDPLSFTSKDEIN 60
           MKIENDIALQHLNPTPSHSNNIEELQQEIDTLRHELQLLEDQLKMFEPDPLSFTSKDEIN
Sbjct: 15  MKIENDIALQHLNPTPSHSNNIEELQQEIDTLRHELQLLEDQLKMFEPDPLSFTSKDEIN 74

Query: 61  SCEKNLLDTLSRITQRKDLLSNHLSPPNYDHDLNELQQYLDPNEGIPTSFETNVANRLPQ 120
           SCEKNLLDTLSRITQRKDLLSNHLSPPNYDHDLNELQQYLDPNEGIPTSFETNVANRLPQ
Sbjct: 75  SCEKNLLDTLSRITQRKDLLSNHLSPPNYDHDLNELQQYLDPNEGIPTSFETNVANRLPQ 134

Query: 121 NDQNSSQVCVASHHSSSIPRRSTIYDKEASNINVGSCNIVRPNNVDDDDYPPWRHHNYTT 180
           NDQNSSQVCVASHHSSSIPRRSTIYDKEASNINVGSCNIVRPNNVDDDDYPPWRHHNYTT
Sbjct: 135 NDQNSSQVCVASHHSSSIPRRSTIYDKEASNINVGSCNIVRPNNVDDDDYPPWRHHNYTT 194

Query: 181 TDQLLSSFTPQTSFHTSDSE---------------------------------------- 240
           TDQLLSSFTPQTSFHTSDSE                                        
Sbjct: 195 TDQLLSSFTPQTSFHTSDSEELQQEVDTLTHELQLAEEQLRLFEPHHLSFTLEDEIDSCE 254

Query: 241 -----------------------------------DEIEEGCMNTTTLQQQVDSISNVNP 249
                                              DEIEEGCMNTTTLQQQVDSISNVNP
Sbjct: 255 KNLLDTLSRITQRKKDLLSDHLSLAYDHLSLNDIQDEIEEGCMNTTTLQQQVDSISNVNP 314

[Close]

BLAST of IVF0012160 vs. ExPASy TrEMBL
Match: A0A1S3B5T1 (agamous-like MADS-box protein AGL66 OS=Cucumis melo OX=3656 GN=LOC103486091 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 5.4e-59
Identity = 162/268 (60.45%), Postives = 188/268 (70.15%), Query Frame = 0


Query: 1   MKIENDIALQHLNPTPSHSNNIEELQQEIDTLRHELQLLEDQLKMFEPDPLSFTSKDEIN 60
           +K ENDIA Q  NPT S+S N+EELQQE+ TLRHELQL E QL++FEPD LSFTS  EIN
Sbjct: 95  LKTENDIAQQLSNPTSSNS-NVEELQQEVGTLRHELQLAEQQLRLFEPDFLSFTSNAEIN 154

Query: 61  SCEKNLLDTLSRITQR-KDLLSNHLSPPNYDHDLNELQQYLDPNEGIPTSFETNVANRLP 120
           SCEKNLLDTL+RITQR KDLLS HLSP  Y+   N +Q YLD  +GIPTSFE++V N LP
Sbjct: 155 SCEKNLLDTLARITQRKKDLLSTHLSP--YEPP-NGIQIYLDQQDGIPTSFESDVGNWLP 214

Query: 121 QNDQNS-SQVCVASHHSSSIPR-----RSTIYDKEAS-----NIN--------VGSCNIV 180
           +N QN+ +Q+CVAS  SSSIP+      +T+YD+  S     NIN        VG  +I 
Sbjct: 215 ENGQNNPNQICVAS-ESSSIPQSGQYPTTTVYDQVVSQAATTNINVGVGVGVGVGGYDIA 274

Query: 181 RPNNVDDDDYPPWRHHNYTTTDQLLSSFTPQTSFHTSDSEDEIEEGCMNTTTLQQQVDSI 240
            PN   DD + PW HHNYTTT QLLSSF PQTSF     ++EI E CMNT   QQQVDSI
Sbjct: 275 NPN---DDGFSPW-HHNYTTT-QLLSSFIPQTSFDV--VKNEIGEPCMNTMIPQQQVDSI 334

Query: 241 SNVNPQKPPSTDGSANYDDDNLPQFNLD 249
           SN N Q PPS DGSANYD+  L Q N+D
Sbjct: 335 SNGN-QMPPS-DGSANYDNVKLSQLNVD 348

[Close]

BLAST of IVF0012160 vs. ExPASy TrEMBL
Match: A0A6J1C454 (agamous-like MADS-box protein AGL104 OS=Momordica charantia OX=3673 GN=LOC111008318 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 7.0e-59
Identity = 156/256 (60.94%), Postives = 187/256 (73.05%), Query Frame = 0


Query: 1   MKIENDIALQHLNPTPSHSNNIEELQQEIDTLRHELQLLEDQLKMFEPDPLSFTSKDEIN 60
           +K ENDIALQ  NPT S+S N+EELQQEI T+RHELQL E QL++FEPDPLSF S  EI 
Sbjct: 97  LKTENDIALQLANPTSSNS-NVEELQQEIGTMRHELQLAEQQLRLFEPDPLSFASNGEIE 156

Query: 61  SCEKNLLDTLSRITQR-KDLLSNHLSPPNYDHDLNELQQYLDPNEGIPTSFETNVANRLP 120
           SCEKNLLDTL+RITQR KDLLS+HLSP  YD   N +Q YLD  EGIPTSFE +VAN LP
Sbjct: 157 SCEKNLLDTLARITQRKKDLLSSHLSP--YDPP-NHIQMYLDSQEGIPTSFENDVANWLP 216

Query: 121 QNDQNSSQVCVASHHSSSIPRR----STIYDK--EASNI-NVGSCNIVRPNNVDDDDYPP 180
           +N Q+S+Q+C  S  SSSIP+     +T+YD+  +ASN+ N+G C++  PN   +D Y  
Sbjct: 217 ENGQSSTQLCGPS-ESSSIPQSGQYPTTVYDQVSQASNMCNMGGCDMGNPN---EDAYSS 276

Query: 181 WRHHNYTTTDQLLSSFTPQTSFHTSDSEDEIEEGCMNTTTLQQQVDSISNVNPQKPPSTD 240
           W HH+YTT+ QLLSSF PQTSF  S  + EI  GCM +   QQQVD+ISN N Q PPS D
Sbjct: 277 W-HHSYTTS-QLLSSFIPQTSFDDS-IKHEIGGGCMMS---QQQVDTISNGN-QMPPS-D 336

Query: 241 GSANYDDDNLPQFNLD 249
           GS NYD   +PQ N+D
Sbjct: 337 GSTNYDATKIPQLNVD 336

[Close]

BLAST of IVF0012160 vs. ExPASy TrEMBL
Match: A0A0A0L153 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G496250 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 5.0e-57
Identity = 158/267 (59.18%), Postives = 186/267 (69.66%), Query Frame = 0


Query: 1   MKIENDIALQHLNPTPSHSNNIEELQQEIDTLRHELQLLEDQLKMFEPDPLSFTSKDEIN 60
           +K ENDIA Q  NPT S+S N+EELQQE+ TLRHELQL E QL++FEPD LSFTS  EIN
Sbjct: 49  LKTENDIAQQLTNPTSSNS-NVEELQQEVGTLRHELQLAEQQLRLFEPDFLSFTSNGEIN 108

Query: 61  SCEKNLLDTLSRITQR-KDLLSNHLSPPNYDHDLNELQQYLDPNEGIPTSFETNVANRLP 120
           SCEKNLLDTL+RITQR KDLLS HLSP  Y+   N +Q YLD  +GIPTSFE++V + LP
Sbjct: 109 SCEKNLLDTLARITQRKKDLLSTHLSP--YEPP-NGIQIYLDQQDGIPTSFESDVGHWLP 168

Query: 121 QND--QNSSQVCVASHHSSSIPR-----RSTIYDKEAS------NINVGSCNIVRPN--- 180
           +++   N +Q+CVAS  SSSIP+      +T+YD+  S      NINVG    V      
Sbjct: 169 ESNGQNNPNQICVAS-ESSSIPQSGQYPTATVYDQVVSQAAAGTNINVGVGVGVGVGGYD 228

Query: 181 --NVDDDDYPPWRHHNYTTTDQLLSSFTPQTSFHTSDSEDEIEEGCMNTTTLQQQVDSIS 240
             N +DD + PW HHNYTTT QLLSSF PQTSF     ++EI E CMNT   QQQVDSIS
Sbjct: 229 IANANDDGFSPW-HHNYTTT-QLLSSFIPQTSFDV--VKNEIGEACMNTMVPQQQVDSIS 288

Query: 241 NVNPQKPPSTDGSANYDDDNLPQFNLD 249
           N N Q PPS DGSANYD+  L Q N+D
Sbjct: 289 NGN-QMPPS-DGSANYDNVKLSQLNVD 304

[Close]

BLAST of IVF0012160 vs. ExPASy TrEMBL
Match: A0A5A7TU15 (Agamous-like MADS-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005700 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 7.0e-51
Identity = 108/129 (83.72%), Postives = 108/129 (83.72%), Query Frame = 0


Query: 141 RSTIYDKEASNINVGSCNIVRPNNVDDDDYPPWRHHNYTTTDQLLSSFTPQTSFHTSDSE 200
           RSTIYDKEASNINVGSCNIVRPNNVDDDDYPPWRHHNYTTTDQLLSSFTPQTSFHTSDSE
Sbjct: 11  RSTIYDKEASNINVGSCNIVRPNNVDDDDYPPWRHHNYTTTDQLLSSFTPQTSFHTSDSE 70

Query: 201 ---------------------DEIEEGCMNTTTLQQQVDSISNVNPQKPPSTDGSANYDD 249
                                DEIEEGCMNTTTLQQQVDSISNVNPQKPPSTDGSANYDD
Sbjct: 71  KDLLSDHLSLAYDHLSLNDIQDEIEEGCMNTTTLQQQVDSISNVNPQKPPSTDGSANYDD 130

[Close]

BLAST of IVF0012160 vs. NCBI nr
Match: XP_008453775.1 (PREDICTED: agamous-like MADS-box protein AGL104 [Cucumis melo])

HSP 1 Score: 464 bits (1193), Expect = 8.89e-163
Identity = 248/323 (76.78%), Postives = 248/323 (76.78%), Query Frame = 0


Query: 1   MKIENDIALQHLNPTPSHSNNIEELQQEIDTLRHELQLLEDQLKMFEPDPLSFTSKDEIN 60
           MKIENDIALQHLNPTPSHSNNIEELQQEIDTLRHELQLLEDQLKMFEPDPLSFTSKDEIN
Sbjct: 15  MKIENDIALQHLNPTPSHSNNIEELQQEIDTLRHELQLLEDQLKMFEPDPLSFTSKDEIN 74

Query: 61  SCEKNLLDTLSRITQRKDLLSNHLSPPNYDHDLNELQQYLDPNEGIPTSFETNVANRLPQ 120
           SCEKNLLDTLSRITQRKDLLSNHLSPPNYDHDLNELQQYLDPNEGIPTSFETNVANRLPQ
Sbjct: 75  SCEKNLLDTLSRITQRKDLLSNHLSPPNYDHDLNELQQYLDPNEGIPTSFETNVANRLPQ 134

Query: 121 NDQNSSQVCVASHHSSSIPRRSTIYDKEASNINVGSCNIVRPNNVDDDDYPPWRHHNYTT 180
           NDQNSSQVCVASHHSSSIPRRSTIYDKEASNINVGSCNIVRPNNVDDDDYPPWRHHNYTT
Sbjct: 135 NDQNSSQVCVASHHSSSIPRRSTIYDKEASNINVGSCNIVRPNNVDDDDYPPWRHHNYTT 194

Query: 181 TDQLLSSFTPQTSFHTSDSE---------------------------------------- 240
           TDQLLSSFTPQTSFHTSDSE                                        
Sbjct: 195 TDQLLSSFTPQTSFHTSDSEELQQEVDTLTHELQLAEEQLRLFEPHHLSFTLEDEIDSCE 254

Query: 241 -----------------------------------DEIEEGCMNTTTLQQQVDSISNVNP 248
                                              DEIEEGCMNTTTLQQQVDSISNVNP
Sbjct: 255 KNLLDTLSRITQRKKDLLSDHLSLAYDHLSLNDIQDEIEEGCMNTTTLQQQVDSISNVNP 314

[Close]

BLAST of IVF0012160 vs. NCBI nr
Match: XP_038883364.1 (agamous-like MADS-box protein AGL104 [Benincasa hispida])

HSP 1 Score: 280 bits (717), Expect = 1.75e-90
Identity = 173/255 (67.84%), Postives = 200/255 (78.43%), Query Frame = 0


Query: 1   MKIENDIALQHLNPTPSHSNNIEELQQEIDTLRHELQLLEDQLKMFEPDPLSFTSKDEIN 60
           +K EN+IALQ +NPT S+SN IEELQQE+ TLRHELQ  E QL+++EPDPLSFTS  EI+
Sbjct: 95  LKTENEIALQLVNPTSSNSN-IEELQQEVGTLRHELQHAEQQLRLYEPDPLSFTSNGEID 154

Query: 61  SCEKNLLDTLSRITQRK-DLLSNHLSPPNYDHDLNELQQYLDPNEGIPTSFETNVANRLP 120
           SCEKNLLDTL+RITQRK DLLS+HLSP  YDH  N +Q YLD +EGIPTSFET+VAN LP
Sbjct: 155 SCEKNLLDTLARITQRKKDLLSSHLSP--YDHP-NGIQLYLDSHEGIPTSFETDVANWLP 214

Query: 121 QNDQNSSQVCVASHHSSSIPRR----STIYDK--EASNINVGSCNIVRPNNVDDDDYPPW 180
           +N QNSSQ+CVAS  SSSIP+     ST+YD+  +A+NIN+G C+I  PN   DD Y PW
Sbjct: 215 ENGQNSSQICVASE-SSSIPQSGQYPSTVYDQVSQATNINIGGCDIGNPN---DDGYSPW 274

Query: 181 RHHNYTTTDQLLSSFTPQTSFHTSDSEDEIEEGCMNTTTLQQQVDSISNVNPQKPPSTDG 240
           +H NYTTT QLLSSF PQTSFHT   + EIEE CMNT   QQQVDSISN N Q PPS DG
Sbjct: 275 QH-NYTTT-QLLSSFIPQTSFHTL--KHEIEEPCMNTIMSQQQVDSISNGN-QLPPS-DG 334

Query: 241 SANYDDDNLPQFNLD 248
           SANYD+  LPQ N+D
Sbjct: 335 SANYDNGKLPQLNVD 335

[Close]

BLAST of IVF0012160 vs. NCBI nr
Match: KAG6577275.1 (Agamous-like MADS-box protein 104, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015359.1 Agamous-like MADS-box protein AGL104 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 245 bits (625), Expect = 1.66e-76
Identity = 158/257 (61.48%), Postives = 185/257 (71.98%), Query Frame = 0


Query: 1   MKIENDIALQHLNPTPSHSNNIEELQQEIDTLRHELQLLEDQLKMFEPDPLSFTSKDEIN 60
           +K ENDIALQ  NPT S+SN +EELQQE+ TLRHELQL E QL++FEPDP SFTS  EI 
Sbjct: 95  LKTENDIALQLANPTSSNSN-VEELQQEVATLRHELQLAEQQLRLFEPDPFSFTSNGEIE 154

Query: 61  SCEKNLLDTLSRITQRK-DLLSNHLSPPNYDHDLNELQQYLDPNEGIPTSFETNVANRLP 120
           SCEKNLLDTL+RI QRK D+L++HLSP  YD   N +Q YLD  +GI +SFE +VAN LP
Sbjct: 155 SCEKNLLDTLARIAQRKKDVLNSHLSP--YDPP-NGIQLYLDSQDGIASSFENDVANWLP 214

Query: 121 QNDQNSSQVCVASHHSSSIPRRS----TIYDK--EASNINVGSCNI--VRPNNVDDDDYP 180
           +N QN +Q+CVA+  SSSIP+      T+YD+  +A N+NVGSCNI      N +DD Y 
Sbjct: 215 ENGQNQNQICVAAE-SSSIPQSGQYPGTVYDQVTQAGNMNVGSCNIGGCDMGNPNDDGYS 274

Query: 181 PWRHHNYTTTDQLLSSFTPQTSFHTSDSEDEIEEGCMNTTTLQQQVDSISNVNPQKPPST 240
           PW HHNYTT+ QLLSSF PQ SF T   + EI   CMNT   QQQVDSISN N Q PPS 
Sbjct: 275 PW-HHNYTTS-QLLSSFIPQASFETL--KHEIGGPCMNTMMSQQQVDSISNGN-QMPPS- 334

Query: 241 DGSANYDDDNLPQFNLD 248
           D SANYD+  LPQ N D
Sbjct: 335 DESANYDNGKLPQLNGD 340

[Close]

BLAST of IVF0012160 vs. NCBI nr
Match: XP_022136666.1 (agamous-like MADS-box protein AGL104 [Momordica charantia])

HSP 1 Score: 236 bits (602), Expect = 4.34e-73
Identity = 156/256 (60.94%), Postives = 187/256 (73.05%), Query Frame = 0


Query: 1   MKIENDIALQHLNPTPSHSNNIEELQQEIDTLRHELQLLEDQLKMFEPDPLSFTSKDEIN 60
           +K ENDIALQ  NPT S+SN +EELQQEI T+RHELQL E QL++FEPDPLSF S  EI 
Sbjct: 97  LKTENDIALQLANPTSSNSN-VEELQQEIGTMRHELQLAEQQLRLFEPDPLSFASNGEIE 156

Query: 61  SCEKNLLDTLSRITQRK-DLLSNHLSPPNYDHDLNELQQYLDPNEGIPTSFETNVANRLP 120
           SCEKNLLDTL+RITQRK DLLS+HLSP  YD   N +Q YLD  EGIPTSFE +VAN LP
Sbjct: 157 SCEKNLLDTLARITQRKKDLLSSHLSP--YDPP-NHIQMYLDSQEGIPTSFENDVANWLP 216

Query: 121 QNDQNSSQVCVASHHSSSIPRR----STIYDK--EASNI-NVGSCNIVRPNNVDDDDYPP 180
           +N Q+S+Q+C  S  SSSIP+     +T+YD+  +ASN+ N+G C++  PN   +D Y  
Sbjct: 217 ENGQSSTQLCGPSE-SSSIPQSGQYPTTVYDQVSQASNMCNMGGCDMGNPN---EDAYSS 276

Query: 181 WRHHNYTTTDQLLSSFTPQTSFHTSDSEDEIEEGCMNTTTLQQQVDSISNVNPQKPPSTD 240
           W HH+YTT+ QLLSSF PQTSF  S  + EI  GCM +   QQQVD+ISN N Q PPS D
Sbjct: 277 W-HHSYTTS-QLLSSFIPQTSFDDS-IKHEIGGGCMMS---QQQVDTISNGN-QMPPS-D 336

Query: 241 GSANYDDDNLPQFNLD 248
           GS NYD   +PQ N+D
Sbjct: 337 GSTNYDATKIPQLNVD 336

[Close]

BLAST of IVF0012160 vs. NCBI nr
Match: XP_008442144.1 (PREDICTED: agamous-like MADS-box protein AGL66 [Cucumis melo])

HSP 1 Score: 236 bits (603), Expect = 4.38e-73
Identity = 162/268 (60.45%), Postives = 188/268 (70.15%), Query Frame = 0


Query: 1   MKIENDIALQHLNPTPSHSNNIEELQQEIDTLRHELQLLEDQLKMFEPDPLSFTSKDEIN 60
           +K ENDIA Q  NPT S+SN +EELQQE+ TLRHELQL E QL++FEPD LSFTS  EIN
Sbjct: 95  LKTENDIAQQLSNPTSSNSN-VEELQQEVGTLRHELQLAEQQLRLFEPDFLSFTSNAEIN 154

Query: 61  SCEKNLLDTLSRITQRK-DLLSNHLSPPNYDHDLNELQQYLDPNEGIPTSFETNVANRLP 120
           SCEKNLLDTL+RITQRK DLLS HLSP  Y+   N +Q YLD  +GIPTSFE++V N LP
Sbjct: 155 SCEKNLLDTLARITQRKKDLLSTHLSP--YEPP-NGIQIYLDQQDGIPTSFESDVGNWLP 214

Query: 121 QNDQNS-SQVCVASHHSSSIPRR-----STIYDKEAS-----NINVG--------SCNIV 180
           +N QN+ +Q+CVAS  SSSIP+      +T+YD+  S     NINVG          +I 
Sbjct: 215 ENGQNNPNQICVASE-SSSIPQSGQYPTTTVYDQVVSQAATTNINVGVGVGVGVGGYDIA 274

Query: 181 RPNNVDDDDYPPWRHHNYTTTDQLLSSFTPQTSFHTSDSEDEIEEGCMNTTTLQQQVDSI 240
            PN   DD + PW HHNYTTT QLLSSF PQTSF     ++EI E CMNT   QQQVDSI
Sbjct: 275 NPN---DDGFSPW-HHNYTTT-QLLSSFIPQTSFDVV--KNEIGEPCMNTMIPQQQVDSI 334

Query: 241 SNVNPQKPPSTDGSANYDDDNLPQFNLD 248
           SN N Q PPS DGSANYD+  L Q N+D
Sbjct: 335 SNGN-QMPPS-DGSANYDNVKLSQLNVD 348

[Close]

BLAST of IVF0012160 vs. TAIR 10
Match: AT1G22130.1 (AGAMOUS-like 104 )

HSP 1 Score: 90.9 bits (224), Expect = 1.6e-18
Identity = 63/179 (35.20%), Postives = 102/179 (56.98%), Query Frame = 0


Query: 1   MKIENDIALQHLNPTPSHSNNIEELQQEIDTLRHELQLLEDQLKMFEPDPLSFTSKDEIN 60
           +K ENDIALQ  NP   +S ++EEL+ E+  L+ +LQ+ E++L+ +EPDP+ FT+ +E  
Sbjct: 106 LKTENDIALQVTNPAAINS-DVEELEHEVCRLQQQLQMAEEELRRYEPDPIRFTTMEEYE 165

Query: 61  SCEKNLLDTLSRITQRKD-LLSNHLSPPNYDHDLNELQQYLDPNEGIPTSFETNVANRLP 120
             EK LLDTL+ + QR+D L+SNHLS     ++ + +Q    PN G P   +  V   LP
Sbjct: 166 VSEKQLLDTLTHVVQRRDHLMSNHLS----SYEASTMQ----PNIGGPFVNDV-VEGWLP 225

Query: 121 QNDQNSSQVCVASHHSSSIPRRST-----IYDKEASNINVGSCNIVRPNNVDDDDYPPW 174
           +N  N + +  AS HS+ +   S+     +    +S+ N  + +     N + + +P W
Sbjct: 226 ENGTNQTHLFDASAHSNQLRELSSAMYEPLLQGSSSSSNQNNMSECHVTNHNGEMFPEW 274

[Close]

BLAST of IVF0012160 vs. TAIR 10
Match: AT1G77980.1 (AGAMOUS-like 66 )

HSP 1 Score: 85.5 bits (210), Expect = 6.6e-17
Identity = 68/209 (32.54%), Postives = 112/209 (53.59%), Query Frame = 0


Query: 1   MKIENDIALQHLNPTPSHSNNIEELQQEIDTLRHELQLLEDQLKMFEPDPLSFTSKDEIN 60
           +K ENDIALQ  NPT  +S ++EEL+ E+  L+ +L + E++L+ +EPDP+ FT+ +E  
Sbjct: 106 LKAENDIALQLTNPTAINS-DVEELEHEVYKLQQQLLMAEEELRKYEPDPIRFTTMEEYE 165

Query: 61  SCEKNLLDTLSRITQRKDLLSNHLSPPNYDHDLNELQQYLDPNEGIPTSFETNVANRLPQ 120
           +CEK L+DTL+R+ QR++ + +     +Y+    + QQ +    G P   +  V   L +
Sbjct: 166 TCEKQLMDTLTRVNQRREHILSQDQLSSYEASALQQQQSM----GGPFGNDV-VGGWLTE 225

Query: 121 NDQNSSQVCVASHHSSSIPRRSTIYDKEASNINVGSCNIVRPNNVDD---DDYPPW-RHH 180
           N  N + +  AS HS+      T+    +S+ N    NI+  +NV +   D +  W + +
Sbjct: 226 NGPNEAHLFDASAHSAMY---ETLLQGSSSSSNQN--NIMGESNVSNHNGDMFQEWAQAY 285

Query: 181 NYTTTDQLLSSFTPQTSFHTSDSEDEIEE 206
           N TT     + F P    H    +  IEE
Sbjct: 286 NSTTAHNPSTLFPPMQHQHGLVVDPNIEE 303

[Close]

BLAST of IVF0012160 vs. TAIR 10
Match: AT1G77950.1 (AGAMOUS-like 67 )

HSP 1 Score: 82.4 bits (202), Expect = 5.6e-16
Identity = 40/81 (49.38%), Postives = 62/81 (76.54%), Query Frame = 0


Query: 1   MKIENDIALQHLNPTPSHSN-NIEELQQEIDTLRHELQLLEDQLKMFEPDPLSFTSKDEI 60
           +KIE+D+ALQ   P P  +N N+EEL+QE+  L+ +LQ+ E++L+ FEPDP+  TS +EI
Sbjct: 106 LKIEDDMALQINEPRPEATNSNVEELEQEVCRLQQQLQISEEELRKFEPDPMRLTSMEEI 165

Query: 61  NSCEKNLLDTLSRITQRKDLL 81
            +CE NL++TL+R+ QR++ L
Sbjct: 166 EACEANLINTLTRVVQRREHL 186

[Close]

BLAST of IVF0012160 vs. TAIR 10
Match: AT1G77950.2 (AGAMOUS-like 67 )

HSP 1 Score: 82.4 bits (202), Expect = 5.6e-16
Identity = 40/81 (49.38%), Postives = 62/81 (76.54%), Query Frame = 0


Query: 1   MKIENDIALQHLNPTPSHSN-NIEELQQEIDTLRHELQLLEDQLKMFEPDPLSFTSKDEI 60
           +KIE+D+ALQ   P P  +N N+EEL+QE+  L+ +LQ+ E++L+ FEPDP+  TS +EI
Sbjct: 106 LKIEDDMALQINEPRPEATNSNVEELEQEVCRLQQQLQISEEELRKFEPDPMRLTSMEEI 165

Query: 61  NSCEKNLLDTLSRITQRKDLL 81
            +CE NL++TL+R+ QR++ L
Sbjct: 166 EACEANLINTLTRVVQRREHL 186

The following BLAST results are available for this feature:

BLAST of IVF0012160 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LM46	2.2e-17	35.20	Agamous-like MADS-box protein AGL104 OS=Arabidopsis thaliana OX=3702 GN=AGL104 P...	[more]
Q1PFC2	9.2e-16	32.54	Agamous-like MADS-box protein AGL66 OS=Arabidopsis thaliana OX=3702 GN=AGL66 PE=...	[more]

BLAST of IVF0012160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BWJ8	2.1e-127	76.78	agamous-like MADS-box protein AGL104 OS=Cucumis melo OX=3656 GN=LOC103494406 PE=...	[more]
A0A1S3B5T1	5.4e-59	60.45	agamous-like MADS-box protein AGL66 OS=Cucumis melo OX=3656 GN=LOC103486091 PE=4...	[more]
A0A6J1C454	7.0e-59	60.94	agamous-like MADS-box protein AGL104 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]
A0A0A0L153	5.0e-57	59.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G496250 PE=4 SV=1	[more]
A0A5A7TU15	7.0e-51	83.72	Agamous-like MADS-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]

BLAST of IVF0012160 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008453775.1	8.89e-163	76.78	PREDICTED: agamous-like MADS-box protein AGL104 [Cucumis melo]	[more]
XP_038883364.1	1.75e-90	67.84	agamous-like MADS-box protein AGL104 [Benincasa hispida]	[more]
KAG6577275.1	1.66e-76	61.48	Agamous-like MADS-box protein 104, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022136666.1	4.34e-73	60.94	agamous-like MADS-box protein AGL104 [Momordica charantia]	[more]
XP_008442144.1	4.38e-73	60.45	PREDICTED: agamous-like MADS-box protein AGL66 [Cucumis melo]	[more]

BLAST of IVF0012160 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G22130.1	1.6e-18	35.20	AGAMOUS-like 104	[more]
AT1G77980.1	6.6e-17	32.54	AGAMOUS-like 66	[more]
AT1G77950.1	5.6e-16	49.38	AGAMOUS-like 67	[more]
AT1G77950.2	5.6e-16	49.38	AGAMOUS-like 67	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 15..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 221..248
None	No IPR available	PANTHER	PTHR48019	SERUM RESPONSE FACTOR HOMOLOG	coord: 1..212
None	No IPR available	PANTHER	PTHR48019:SF35	AGAMOUS-LIKE MADS-BOX PROTEIN AGL104	coord: 1..212

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0012160.1	IVF0012160.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding