IVF0012156 (gene) Melon (IVF77) v1

Overview


Name	IVF0012156
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	GDP-L-fucose synthase
Location	chr05: 22057890 .. 22058952 (-)
RNA-Seq Expression	IVF0012156
Synteny	IVF0012156

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCGGCGCCGCCGACAACTGTAATCTCTCTCTACATTCAGTGGCGTTTCGCGTTTCTTAGATTCTGAATCCTTTCTGAAATTTCTTTTCTCTTGATTTTGCAGCTTCATCGGGATCCTCGGTTCTCTTCGATAAATCGGCGAAGATCTTCGTCGCCGGTCACCGTGGCCTCGTCGGTTCCGCCATTGTTCGAAAACTCCAGCAGCTTGGATTCACGAATCTCCTTCTTCGTTCTCACTCTGAGCTTGACCTAACTCGCCAATCCGATGTCGAATCGTTCTTCGCTAATGAAAAACCTCGATTCGTTATCCTCGCCGCCGCGAAAGTTGGTGGAATCACGCCAACAACACCTACCAGCGGATTTCATCGCCATTAACTTCAAATCCAAACTAATGTCATCGATTCAGCCTACCGCTATGGCGTTGAGAAGCTACTATTCCTCGGTTCATCATGTATTTATCCAAAATTCGCTCCACAACCGATTCCCGAAGATGCATTACTAACCGGTCCTCTGGAGCCGACGAACGAGTGGTACGCGGTGGCGAAGATCGCCGGAATCAAAATGTGTCAAGCATATCGAATTCAATACAAATGGGATGCAATTTCAGGAATGCCGACTAATCTATACGGTCCAAACGACAATTTCCACCCGGAAAATTCTCACGTATTGCCGGCATTGATGAGGAGATTCATGAGGCAAAGGTTAAAGGAGCAAAAGAAGTGGTGGTTTGGGGAAGTGGAAGCCCTTTGAGGGAATTTCTTCACGTCGACGATTGGCCGACGCCGTCGTATTCCTCATGGAGGAATACAGTGATTTGGGGCATTTGAATGTTGGAAGTGGGAAGGAGGTGAGTATCAAGGAGCTGGCTGAATTGGTGAAAGAAGTGGTGGGATTTGAAGGAGATCTTGTTGGGATAAAATCAAAACCTGATGGAAACTCCAAGGAATTGATGGACAGTTCTAAGCTTGCTGATTGGGTTGGAATCCAAAGATCTCTCTCAAAGATGGGTTGTGGATACTTACAAATGGTATGTTCAAAATGTGCAGCAATGAAGAAATGA

mRNA sequence

ATGGGCGGCGCCGCCGACAACTCTTCATCGGGATCCTCGGTTCTCTTCGATAAATCGGCGAAGATCTTCGTCGCCGGTCACCGTGGCCTCGTCGGTTCCGCCATTGTTCGAAAACTCCAGCAGCTTGGATTCACGAATCTCCTTCTTCGTTCTCACTCTGAGCTTGACCTAACTCGCCAATCCGATGTCGAATCGTTCTTCGCTAATGAAAAACCTCGATTCGTTATCCTCGCCGCCGCGAAAGTTGCCTACCGCTATGGCGTTGAGAAGCTACTATTCCTCGGTTCATCATGTATTTATCCAAAATTCGCTCCACAACCGATTCCCGAAGATGCATTACTAACCGGTCCTCTGGAGCCGACGAACGAGTGGTACGCGGTGGCGAAGATCGCCGGAATCAAAATGTGTCAAGCATATCGAATTCAATACAAATGGGATGCAATTTCAGGAATGCCGACTAATCTATACGGTCCAAACGACAATTTCCACCCGGAAAATTCTCACGTATTGCCGGCATTGATGAGGAGATTCATGAGGCAAAGGTTAAAGGAGCAAAAGAAGTGGTGGTTTGGGGAAGAATACAGTGATTTGGGGCATTTGAATGTTGGAAGTGGGAAGGAGGTGAGTATCAAGGAGCTGGCTGAATTGGTGAAAGAAGTGGTGGGATTTGAAGGAGATCTTGTTGGGATAAAATCAAAACCTGATGGAAACTCCAAGGAATTGATGGACAGTTCTAAGCTTGCTGATTGGGTTGGAATCCAAAGATCTCTCTCAAAGATGGGTTGTGGATACTTACAAATGGTATGTTCAAAATGTGCAGCAATGAAGAAATGA

Coding sequence (CDS)

ATGGGCGGCGCCGCCGACAACTCTTCATCGGGATCCTCGGTTCTCTTCGATAAATCGGCGAAGATCTTCGTCGCCGGTCACCGTGGCCTCGTCGGTTCCGCCATTGTTCGAAAACTCCAGCAGCTTGGATTCACGAATCTCCTTCTTCGTTCTCACTCTGAGCTTGACCTAACTCGCCAATCCGATGTCGAATCGTTCTTCGCTAATGAAAAACCTCGATTCGTTATCCTCGCCGCCGCGAAAGTTGCCTACCGCTATGGCGTTGAGAAGCTACTATTCCTCGGTTCATCATGTATTTATCCAAAATTCGCTCCACAACCGATTCCCGAAGATGCATTACTAACCGGTCCTCTGGAGCCGACGAACGAGTGGTACGCGGTGGCGAAGATCGCCGGAATCAAAATGTGTCAAGCATATCGAATTCAATACAAATGGGATGCAATTTCAGGAATGCCGACTAATCTATACGGTCCAAACGACAATTTCCACCCGGAAAATTCTCACGTATTGCCGGCATTGATGAGGAGATTCATGAGGCAAAGGTTAAAGGAGCAAAAGAAGTGGTGGTTTGGGGAAGAATACAGTGATTTGGGGCATTTGAATGTTGGAAGTGGGAAGGAGGTGAGTATCAAGGAGCTGGCTGAATTGGTGAAAGAAGTGGTGGGATTTGAAGGAGATCTTGTTGGGATAAAATCAAAACCTGATGGAAACTCCAAGGAATTGATGGACAGTTCTAAGCTTGCTGATTGGGTTGGAATCCAAAGATCTCTCTCAAAGATGGGTTGTGGATACTTACAAATGGTATGTTCAAAATGTGCAGCAATGAAGAAATGA

Protein sequence

MGGAADNSSSGSSVLFDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQSDVESFFANEKPRFVILAAAKVAYRYGVEKLLFLGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYKWDAISGMPTNLYGPNDNFHPENSHVLPALMRRFMRQRLKEQKKWWFGEEYSDLGHLNVGSGKEVSIKELAELVKEVVGFEGDLVGIKSKPDGNSKELMDSSKLADWVGIQRSLSKMGCGYLQMVCSKCAAMKK

Homology

[Close]

BLAST of IVF0012156 vs. ExPASy Swiss-Prot
Match: Q9LMU0 (Putative GDP-L-fucose synthase 2 OS=Arabidopsis thaliana OX=3702 GN=GER2 PE=1 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 6.5e-95
Identity = 197/325 (60.62%), Postives = 223/325 (68.62%), Query Frame = 0


Query: 5   ADNSSS---GSSVLFDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQS 64
           ADN+ S     S + +KSAKIFVAGHRGLVGSAIVRKLQ  GFTNL+LR+HSELDLT QS
Sbjct: 2   ADNTGSEMKSGSFMLEKSAKIFVAGHRGLVGSAIVRKLQDQGFTNLVLRTHSELDLTSQS 61

Query: 65  DVESFFANEKPRFVILAAAKV---------------------------AYRYGVEKLLFL 124
           DVESFFA EKP +VILAAAKV                           AY +GV+KLLFL
Sbjct: 62  DVESFFATEKPVYVILAAAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYTHGVKKLLFL 121

Query: 125 GSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYKWDAISGMPTN 184
           GSSCIYPKFAPQPIPE ALLTGPLEPTNEWYA+AKIAGIKMCQAYR+Q++WDAISGMPTN
Sbjct: 122 GSSCIYPKFAPQPIPESALLTGPLEPTNEWYAIAKIAGIKMCQAYRLQHQWDAISGMPTN 181

Query: 185 LYGPNDNFHPENSHVLPALMRRFMRQRLK---EQKKWWFG-------------------- 244
           LYG NDNFHPENSHVLPALMRRF   +     E   W  G                    
Sbjct: 182 LYGQNDNFHPENSHVLPALMRRFHEAKANNADEVVVWGSGSPLREFLHVDDLADACVFLM 241

Query: 245 EEYSDLGHLNVGSGKEVSIKELAELVKEVVGFEGDLVGIKSKPDGNSKELMDSSKLAD-- 272
           ++YS   H+NVGSG EV+IKELAELVKEVVGF+G LV   +KPDG  ++LMDSSKLA   
Sbjct: 242 DQYSGFEHVNVGSGVEVTIKELAELVKEVVGFKGKLVWDTTKPDGTPRKLMDSSKLASLG 301

[Close]

BLAST of IVF0012156 vs. ExPASy Swiss-Prot
Match: O49213 (GDP-L-fucose synthase 1 OS=Arabidopsis thaliana OX=3702 GN=GER1 PE=1 SV=3)

HSP 1 Score: 344.7 bits (883), Expect = 9.4e-94
Identity = 192/322 (59.63%), Postives = 224/322 (69.57%), Query Frame = 0


Query: 5   ADNSSSGSSVLFDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQSDVE 64
           A+   S  S + DKSAKIFVAGHRGLVGSAIVRKLQ+ GFTNL+L++H+ELDLTRQ+DVE
Sbjct: 2   AETIGSEVSSMSDKSAKIFVAGHRGLVGSAIVRKLQEQGFTNLVLKTHAELDLTRQADVE 61

Query: 65  SFFANEKPRFVILAAAKV---------------------------AYRYGVEKLLFLGSS 124
           SFF+ EKP +VILAAAKV                           AY +GV+KLLFLGSS
Sbjct: 62  SFFSQEKPVYVILAAAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYEHGVKKLLFLGSS 121

Query: 125 CIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYKWDAISGMPTNLYG 184
           CIYPKFAPQPIPE ALLT  LEPTNEWYA+AKIAGIK CQAYRIQ+ WDAISGMPTNLYG
Sbjct: 122 CIYPKFAPQPIPESALLTASLEPTNEWYAIAKIAGIKTCQAYRIQHGWDAISGMPTNLYG 181

Query: 185 PNDNFHPENSHVLPALMRRFMRQRL---KEQKKWWFG--------------------EEY 244
           PNDNFHPENSHVLPALMRRF   ++   +E   W  G                    + Y
Sbjct: 182 PNDNFHPENSHVLPALMRRFHEAKVNGAEEVVVWGTGSPLREFLHVDDLADACVFLLDRY 241

Query: 245 SDLGHLNVGSGKEVSIKELAELVKEVVGFEGDLVGIKSKPDGNSKELMDSSKLAD--W-- 272
           S L H+N+GSG+EV+I+ELAELVKEVVGFEG L    +KPDG  ++LMDSSKLA   W  
Sbjct: 242 SGLEHVNIGSGQEVTIRELAELVKEVVGFEGKLGWDCTKPDGTPRKLMDSSKLASLGWTP 301

[Close]

BLAST of IVF0012156 vs. ExPASy Swiss-Prot
Match: Q67WR2 (Probable GDP-L-fucose synthase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0652400 PE=2 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 3.3e-86
Identity = 176/298 (59.06%), Postives = 204/298 (68.46%), Query Frame = 0


Query: 3   GAADNSSSGSSVLFDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQSD 62
           G    +   +S L DK  K+FVAGHRGLVGSAI+R L  LGFTN+++R+H+ELDLTRQSD
Sbjct: 2   GTVTTADPHASFLADKGGKVFVAGHRGLVGSAILRHLVSLGFTNVVVRTHAELDLTRQSD 61

Query: 63  VESFFANEKPRFVILAAAKV---------------------------AYRYG-VEKLLFL 122
           VE+FFA E PR+V+LAAAKV                           A + G V KLLFL
Sbjct: 62  VEAFFAAELPRYVVLAAAKVGGIHANSTFPADFIAANLQIQTNVVDAALKCGSVRKLLFL 121

Query: 123 GSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYKWDAISGMPTN 182
           GSSCIYPKFAPQPIPE++LL+GPLEPTNEWYAVAKIAGIKMCQAYRIQ+ +DAIS MPTN
Sbjct: 122 GSSCIYPKFAPQPIPENSLLSGPLEPTNEWYAVAKIAGIKMCQAYRIQHGFDAISAMPTN 181

Query: 183 LYGPNDNFHPENSHVLPALMRRFMRQRLK---EQKKWWFG-------------------- 242
           LYGP DNFHPENSHVLPAL+RRF   +     E   W  G                    
Sbjct: 182 LYGPQDNFHPENSHVLPALIRRFHEAKASNAAEVVVWGTGSPLREFLHVDDLADAVIFLM 241

Query: 243 EEYSDLGHLNVGSGKEVSIKELAELVKEVVGFEGDLVGIKSKPDGNSKELMDSSKLAD 250
           + YS L H+NVGSG EV+IKELAELVKEVVGF+G LV   SKPDG  ++LMDSSK+ +
Sbjct: 242 DHYSGLEHVNVGSGSEVTIKELAELVKEVVGFQGKLVWDSSKPDGTPRKLMDSSKIQE 299

[Close]

BLAST of IVF0012156 vs. ExPASy Swiss-Prot
Match: Q67WR5 (Putative GDP-L-fucose synthase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0652300 PE=3 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.1e-62
Identity = 142/298 (47.65%), Postives = 182/298 (61.07%), Query Frame = 0


Query: 3   GAADNSSSGSSVLF--DKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ 62
           G AD     ++V F  DKSAK+F+AGHRG+VGSA+ RKL  LGFTN+++R+ +ELDL  Q
Sbjct: 16  GDADGDGDAAAVSFLGDKSAKVFIAGHRGMVGSAVHRKLDALGFTNVVVRTRAELDLACQ 75

Query: 63  SDVESFFANEKPRFVILAAAKV---------------------------AYRYG-VEKLL 122
           + VE+FFA E PR+VILAAAKV                           A R G V KLL
Sbjct: 76  AAVEAFFAAELPRYVILAAAKVGGVHASSAAPAEYLTENLRITVNVVDAARRCGSVRKLL 135

Query: 123 FLGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYKWDAISGMP 182
            L SS IYP  APQP PE ALLTGP    +EWYA+ KIAGIKMCQA R +Y  DAI+  P
Sbjct: 136 VLASSTIYPADAPQPTPESALLTGPPAEGSEWYAIPKIAGIKMCQAVRAEYGLDAIAAAP 195

Query: 183 TNLYGPNDNFHPENSHVLPALMRRFMRQRLK---EQKKWWFG------------------ 242
            NLYGP   F PE+SHV+PAL+RRF R +L+   E   W  G                  
Sbjct: 196 NNLYGPRHPFPPEHSHVIPALIRRFHRAKLEGAGEVAVWGSGAAAREFTHVDDLAEAVVV 255

Query: 243 --EEYSDLGHLNVGSGKEVSIKELAELVKEVVGFEGDLVGIKSKPDGNSKELMDSSKL 248
             E YS   H+NVGSG+EV+++ELAE V+ VVG+EG +    ++P+G ++ ++DS ++
Sbjct: 256 LMERYSGEEHVNVGSGEEVTVRELAEAVRGVVGYEGVVAWDAARPEGVARRVVDSGRM 313

[Close]

BLAST of IVF0012156 vs. ExPASy Swiss-Prot
Match: P55353 (GDP-L-fucose synthase OS=Sinorhizobium fredii (strain NBRC 101917 / NGR234) OX=394 GN=fcl PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 4.3e-62
Identity = 134/277 (48.38%), Postives = 171/277 (61.73%), Query Frame = 0


Query: 21  KIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQSDVESFFANEKPRFVILAAA 80
           +I+VAGH+G+VGSAI+R L       +++    +LDLTRQ +VE F   EKP  VI+AAA
Sbjct: 10  RIWVAGHKGMVGSAIIRSLASED-CEVIVADRQKLDLTRQEEVEKFLLKEKPHAVIMAAA 69

Query: 81  KV---------------------------AYRYGVEKLLFLGSSCIYPKFAPQPIPEDAL 140
           KV                           ++R GVEKLLFLGSSCIYPK+A QPI E+AL
Sbjct: 70  KVGGILANDTMPADFIYQNLIMEANVIEGSFRSGVEKLLFLGSSCIYPKYAAQPIREEAL 129

Query: 141 LTGPLEPTNEWYAVAKIAGIKMCQAYRIQYKWDAISGMPTNLYGPNDNFHPENSHVLPAL 200
           LTGPLEPTNEWYA+AKIAGIK+CQAYR QY  + IS MPTNLYGP D F   +SHV+PAL
Sbjct: 130 LTGPLEPTNEWYAIAKIAGIKLCQAYRKQYGANFISAMPTNLYGPRDKFDLNSSHVVPAL 189

Query: 201 MRRFMRQRLKE---QKKWWFG--------------------EEYSDLGHLNVGSGKEVSI 248
           +R+    ++K+      W  G                    + YS+  H+N+GSG E+SI
Sbjct: 190 IRKAHEAKIKDLGCLSIWGSGTPTRDFLYSEDCSDALVFLLKHYSETEHINIGSGGEISI 249

[Close]

BLAST of IVF0012156 vs. ExPASy TrEMBL
Match: A0A5D3BBR3 (GDP-L-fucose synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00200 PE=3 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 1.4e-116
Identity = 231/299 (77.26%), Postives = 237/299 (79.26%), Query Frame = 0


Query: 1   MGGAADNSSSGSSVLFDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ 60
           MGGAADNSSSGSS LFDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ
Sbjct: 1   MGGAADNSSSGSSFLFDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ 60

Query: 61  SDVESFFANEKPRFVILAAAKV---------------------------AYRYGVEKLLF 120
           SDVESFFANEKPRFVILAAAKV                           AYRYGVEKLLF
Sbjct: 61  SDVESFFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRYGVEKLLF 120

Query: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYKWDAISGMPT 180
           LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYKWDAISGMPT
Sbjct: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYKWDAISGMPT 180

Query: 181 NLYGPNDNFHPENSHVLPALMRRFMRQRLKEQKK---WWFG------------------- 240
           NLYGPNDNFHPENSHVLPALMRRF   ++K  K+   W  G                   
Sbjct: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVKGAKEVVVWGSGSPLREFLHVDDLADAVVFL 240

Query: 241 -EEYSDLGHLNVGSGKEVSIKELAELVKEVVGFEGDLVGIKSKPDGNSKELMDSSKLAD 250
            EEYSDLGHLNVGSGKEVSIKELAELVKEVVGFEGDLV  KSKPDG  ++LMDSSKLA+
Sbjct: 241 MEEYSDLGHLNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAE 299

[Close]

BLAST of IVF0012156 vs. ExPASy TrEMBL
Match: A0A1S3BTW0 (GDP-L-fucose synthase OS=Cucumis melo OX=3656 GN=LOC103493500 PE=3 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 3.1e-116
Identity = 230/299 (76.92%), Postives = 237/299 (79.26%), Query Frame = 0


Query: 1   MGGAADNSSSGSSVLFDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ 60
           MGGAADN+SSGSS LFDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ
Sbjct: 1   MGGAADNASSGSSFLFDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ 60

Query: 61  SDVESFFANEKPRFVILAAAKV---------------------------AYRYGVEKLLF 120
           SDVESFFANEKPRFVILAAAKV                           AYRYGVEKLLF
Sbjct: 61  SDVESFFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRYGVEKLLF 120

Query: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYKWDAISGMPT 180
           LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYKWDAISGMPT
Sbjct: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYKWDAISGMPT 180

Query: 181 NLYGPNDNFHPENSHVLPALMRRFMRQRLKEQKK---WWFG------------------- 240
           NLYGPNDNFHPENSHVLPALMRRF   ++K  K+   W  G                   
Sbjct: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVKGAKEVVVWGSGSPLREFLHVDDLADAVVFL 240

Query: 241 -EEYSDLGHLNVGSGKEVSIKELAELVKEVVGFEGDLVGIKSKPDGNSKELMDSSKLAD 250
            EEYSDLGHLNVGSGKEVSIKELAELVKEVVGFEGDLV  KSKPDG  ++LMDSSKLA+
Sbjct: 241 MEEYSDLGHLNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAE 299

[Close]

BLAST of IVF0012156 vs. ExPASy TrEMBL
Match: A0A0A0LH41 (GDP-L-fucose synthase OS=Cucumis sativus OX=3659 GN=Csa_2G036660 PE=3 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 5.3e-116
Identity = 229/299 (76.59%), Postives = 237/299 (79.26%), Query Frame = 0


Query: 1   MGGAADNSSSGSSVLFDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ 60
           MGGAADN+SSGSS LFDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNL+LRSHSELDLTRQ
Sbjct: 1   MGGAADNASSGSSFLFDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLILRSHSELDLTRQ 60

Query: 61  SDVESFFANEKPRFVILAAAKV---------------------------AYRYGVEKLLF 120
           SDVESFFANEKPRFVILAAAKV                           AYRYGVEKLLF
Sbjct: 61  SDVESFFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRYGVEKLLF 120

Query: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYKWDAISGMPT 180
           LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYKWDAISGMPT
Sbjct: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYKWDAISGMPT 180

Query: 181 NLYGPNDNFHPENSHVLPALMRRFMRQRLKEQKK---WWFG------------------- 240
           NLYGPNDNFHPENSHVLPALMRRF   ++K  K+   W  G                   
Sbjct: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVKGAKEVVVWGSGSPLREFLHVDDLADAVVFL 240

Query: 241 -EEYSDLGHLNVGSGKEVSIKELAELVKEVVGFEGDLVGIKSKPDGNSKELMDSSKLAD 250
            EEYSDLGHLNVGSGKEVSIKELAELVKEVVGFEGDLV  KSKPDG  ++LMDSSKLA+
Sbjct: 241 MEEYSDLGHLNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAE 299

[Close]

BLAST of IVF0012156 vs. ExPASy TrEMBL
Match: A0A6J1G3B1 (GDP-L-fucose synthase OS=Cucurbita moschata OX=3662 GN=LOC111450399 PE=3 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 1.8e-111
Identity = 223/299 (74.58%), Postives = 233/299 (77.93%), Query Frame = 0


Query: 1   MGGAADNSSSGSSVLFDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ 60
           MGGAADN SSGSS L DKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ
Sbjct: 1   MGGAADNVSSGSSFLSDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ 60

Query: 61  SDVESFFANEKPRFVILAAAKV---------------------------AYRYGVEKLLF 120
           SDVESFFANEKPRFVILAAAKV                           AYR+GV+KLLF
Sbjct: 61  SDVESFFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRHGVQKLLF 120

Query: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYKWDAISGMPT 180
           LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQ+ W+AISGMPT
Sbjct: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQHNWNAISGMPT 180

Query: 181 NLYGPNDNFHPENSHVLPALMRRFMRQRL---KEQKKWWFG------------------- 240
           NLYGPNDNFHPENSHVLPALMRRF   ++   KE   W  G                   
Sbjct: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGSGSPLREFLHVDDLADAVAFL 240

Query: 241 -EEYSDLGHLNVGSGKEVSIKELAELVKEVVGFEGDLVGIKSKPDGNSKELMDSSKLAD 250
            EEYSDLGH+NVGSGKEVSIKELAELVKEVVGFEGDLV  KSKPDG  ++LMDSSKLA+
Sbjct: 241 MEEYSDLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAE 299

[Close]

BLAST of IVF0012156 vs. ExPASy TrEMBL
Match: A0A6J1KKK7 (GDP-L-fucose synthase OS=Cucurbita maxima OX=3661 GN=LOC111493996 PE=3 SV=1)

HSP 1 Score: 411.4 bits (1056), Expect = 3.0e-111
Identity = 221/299 (73.91%), Postives = 233/299 (77.93%), Query Frame = 0


Query: 1   MGGAADNSSSGSSVLFDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ 60
           MGGAADN+SSGSS L DKSAKIF+AGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ
Sbjct: 1   MGGAADNASSGSSFLSDKSAKIFIAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ 60

Query: 61  SDVESFFANEKPRFVILAAAKV---------------------------AYRYGVEKLLF 120
           SDVESFFANEKPRF ILAAAKV                           AYR+GV+KLLF
Sbjct: 61  SDVESFFANEKPRFAILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRHGVQKLLF 120

Query: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYKWDAISGMPT 180
           LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQ+ W+AISGMPT
Sbjct: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQHNWNAISGMPT 180

Query: 181 NLYGPNDNFHPENSHVLPALMRRFMRQRL---KEQKKWWFG------------------- 240
           NLYGPNDNFHPENSHVLPALMRRF   ++   KE   W  G                   
Sbjct: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGSGSPLREFLHVDDLADAVAFL 240

Query: 241 -EEYSDLGHLNVGSGKEVSIKELAELVKEVVGFEGDLVGIKSKPDGNSKELMDSSKLAD 250
            EEYSDLGH+NVGSGKEVSIKELAELVKEVVGFEGDLV  KSKPDG  ++LMDSSKLA+
Sbjct: 241 MEEYSDLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAE 299

[Close]

BLAST of IVF0012156 vs. NCBI nr
Match: KAA0043095.1 (putative GDP-L-fucose synthase 2 [Cucumis melo var. makuwa] >TYJ96394.1 putative GDP-L-fucose synthase 2 [Cucumis melo var. makuwa])

HSP 1 Score: 428 bits (1100), Expect = 2.65e-148
Identity = 231/299 (77.26%), Postives = 237/299 (79.26%), Query Frame = 0


Query: 1   MGGAADNSSSGSSVLFDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ 60
           MGGAADNSSSGSS LFDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ
Sbjct: 1   MGGAADNSSSGSSFLFDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ 60

Query: 61  SDVESFFANEKPRFVILAAAKV---------------------------AYRYGVEKLLF 120
           SDVESFFANEKPRFVILAAAKV                           AYRYGVEKLLF
Sbjct: 61  SDVESFFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRYGVEKLLF 120

Query: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYKWDAISGMPT 180
           LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYKWDAISGMPT
Sbjct: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYKWDAISGMPT 180

Query: 181 NLYGPNDNFHPENSHVLPALMRRFMRQRLKEQKK---WWFG------------------- 240
           NLYGPNDNFHPENSHVLPALMRRF   ++K  K+   W  G                   
Sbjct: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVKGAKEVVVWGSGSPLREFLHVDDLADAVVFL 240

Query: 241 -EEYSDLGHLNVGSGKEVSIKELAELVKEVVGFEGDLVGIKSKPDGNSKELMDSSKLAD 249
            EEYSDLGHLNVGSGKEVSIKELAELVKEVVGFEGDLV  KSKPDG  ++LMDSSKLA+
Sbjct: 241 MEEYSDLGHLNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAE 299

[Close]

BLAST of IVF0012156 vs. NCBI nr
Match: XP_008452484.1 (PREDICTED: putative GDP-L-fucose synthase 2 [Cucumis melo] >XP_016902552.1 PREDICTED: putative GDP-L-fucose synthase 2 [Cucumis melo])

HSP 1 Score: 427 bits (1097), Expect = 7.57e-148
Identity = 230/299 (76.92%), Postives = 237/299 (79.26%), Query Frame = 0


Query: 1   MGGAADNSSSGSSVLFDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ 60
           MGGAADN+SSGSS LFDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ
Sbjct: 1   MGGAADNASSGSSFLFDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ 60

Query: 61  SDVESFFANEKPRFVILAAAKV---------------------------AYRYGVEKLLF 120
           SDVESFFANEKPRFVILAAAKV                           AYRYGVEKLLF
Sbjct: 61  SDVESFFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRYGVEKLLF 120

Query: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYKWDAISGMPT 180
           LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYKWDAISGMPT
Sbjct: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYKWDAISGMPT 180

Query: 181 NLYGPNDNFHPENSHVLPALMRRFMRQRLKEQKK---WWFG------------------- 240
           NLYGPNDNFHPENSHVLPALMRRF   ++K  K+   W  G                   
Sbjct: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVKGAKEVVVWGSGSPLREFLHVDDLADAVVFL 240

Query: 241 -EEYSDLGHLNVGSGKEVSIKELAELVKEVVGFEGDLVGIKSKPDGNSKELMDSSKLAD 249
            EEYSDLGHLNVGSGKEVSIKELAELVKEVVGFEGDLV  KSKPDG  ++LMDSSKLA+
Sbjct: 241 MEEYSDLGHLNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAE 299

[Close]

BLAST of IVF0012156 vs. NCBI nr
Match: XP_004144717.1 (putative GDP-L-fucose synthase 2 [Cucumis sativus] >KGN61068.1 hypothetical protein Csa_021261 [Cucumis sativus])

HSP 1 Score: 426 bits (1095), Expect = 1.53e-147
Identity = 229/299 (76.59%), Postives = 237/299 (79.26%), Query Frame = 0


Query: 1   MGGAADNSSSGSSVLFDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ 60
           MGGAADN+SSGSS LFDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNL+LRSHSELDLTRQ
Sbjct: 1   MGGAADNASSGSSFLFDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLILRSHSELDLTRQ 60

Query: 61  SDVESFFANEKPRFVILAAAKV---------------------------AYRYGVEKLLF 120
           SDVESFFANEKPRFVILAAAKV                           AYRYGVEKLLF
Sbjct: 61  SDVESFFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRYGVEKLLF 120

Query: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYKWDAISGMPT 180
           LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYKWDAISGMPT
Sbjct: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYKWDAISGMPT 180

Query: 181 NLYGPNDNFHPENSHVLPALMRRFMRQRLKEQKK---WWFG------------------- 240
           NLYGPNDNFHPENSHVLPALMRRF   ++K  K+   W  G                   
Sbjct: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVKGAKEVVVWGSGSPLREFLHVDDLADAVVFL 240

Query: 241 -EEYSDLGHLNVGSGKEVSIKELAELVKEVVGFEGDLVGIKSKPDGNSKELMDSSKLAD 249
            EEYSDLGHLNVGSGKEVSIKELAELVKEVVGFEGDLV  KSKPDG  ++LMDSSKLA+
Sbjct: 241 MEEYSDLGHLNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAE 299

[Close]

BLAST of IVF0012156 vs. NCBI nr
Match: XP_038889124.1 (putative GDP-L-fucose synthase 2 [Benincasa hispida])

HSP 1 Score: 416 bits (1069), Expect = 1.38e-143
Identity = 225/299 (75.25%), Postives = 234/299 (78.26%), Query Frame = 0


Query: 1   MGGAADNSSSGSSVLFDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ 60
           MGGAADN+SS SS LFDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSH+ELDLTRQ
Sbjct: 1   MGGAADNASSRSSFLFDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHTELDLTRQ 60

Query: 61  SDVESFFANEKPRFVILAAAKV---------------------------AYRYGVEKLLF 120
           SDVE+FFANEKPRFVILAAAKV                           AYRYGVEKLLF
Sbjct: 61  SDVEAFFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRYGVEKLLF 120

Query: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYKWDAISGMPT 180
           LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQY W+AISGMPT
Sbjct: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYNWNAISGMPT 180

Query: 181 NLYGPNDNFHPENSHVLPALMRRFMRQRL---KEQKKWWFG------------------- 240
           NLYGPNDNFHPENSHVLPALMRRF   ++   KE   W  G                   
Sbjct: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGSGSPLREFLHVDDLADAVVFL 240

Query: 241 -EEYSDLGHLNVGSGKEVSIKELAELVKEVVGFEGDLVGIKSKPDGNSKELMDSSKLAD 249
            EEYSDLGHLNVGSGKEVSIKELAELVKEVVGFEGDLV  KSKPDG  ++LMDSSKLA+
Sbjct: 241 MEEYSDLGHLNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAE 299

[Close]

BLAST of IVF0012156 vs. NCBI nr
Match: XP_023521193.1 (putative GDP-L-fucose synthase 2 [Cucurbita pepo subsp. pepo] >KAG7030077.1 putative GDP-L-fucose synthase 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 412 bits (1059), Expect = 4.57e-142
Identity = 223/299 (74.58%), Postives = 234/299 (78.26%), Query Frame = 0


Query: 1   MGGAADNSSSGSSVLFDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ 60
           MGGAADN+SSGSS L DKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ
Sbjct: 1   MGGAADNASSGSSFLSDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ 60

Query: 61  SDVESFFANEKPRFVILAAAKV---------------------------AYRYGVEKLLF 120
           SDVESFFANEKPRFVILAAAKV                           AYR+GV+KLLF
Sbjct: 61  SDVESFFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRHGVQKLLF 120

Query: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYKWDAISGMPT 180
           LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQ+ W+AISGMPT
Sbjct: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQHNWNAISGMPT 180

Query: 181 NLYGPNDNFHPENSHVLPALMRRFMRQRL---KEQKKWWFG------------------- 240
           NLYGPNDNFHPENSHVLPALMRRF   ++   KE   W  G                   
Sbjct: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGSGSPLREFLHVDDLADAVAFL 240

Query: 241 -EEYSDLGHLNVGSGKEVSIKELAELVKEVVGFEGDLVGIKSKPDGNSKELMDSSKLAD 249
            EEYSDLGH+NVGSGKEVSIKELAELVKEVVGFEGDLV  KSKPDG  ++LMDSSKLA+
Sbjct: 241 MEEYSDLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAE 299

[Close]

BLAST of IVF0012156 vs. TAIR 10
Match: AT1G17890.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 348.6 bits (893), Expect = 4.6e-96
Identity = 197/325 (60.62%), Postives = 223/325 (68.62%), Query Frame = 0


Query: 5   ADNSSS---GSSVLFDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQS 64
           ADN+ S     S + +KSAKIFVAGHRGLVGSAIVRKLQ  GFTNL+LR+HSELDLT QS
Sbjct: 2   ADNTGSEMKSGSFMLEKSAKIFVAGHRGLVGSAIVRKLQDQGFTNLVLRTHSELDLTSQS 61

Query: 65  DVESFFANEKPRFVILAAAKV---------------------------AYRYGVEKLLFL 124
           DVESFFA EKP +VILAAAKV                           AY +GV+KLLFL
Sbjct: 62  DVESFFATEKPVYVILAAAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYTHGVKKLLFL 121

Query: 125 GSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYKWDAISGMPTN 184
           GSSCIYPKFAPQPIPE ALLTGPLEPTNEWYA+AKIAGIKMCQAYR+Q++WDAISGMPTN
Sbjct: 122 GSSCIYPKFAPQPIPESALLTGPLEPTNEWYAIAKIAGIKMCQAYRLQHQWDAISGMPTN 181

Query: 185 LYGPNDNFHPENSHVLPALMRRFMRQRLK---EQKKWWFG-------------------- 244
           LYG NDNFHPENSHVLPALMRRF   +     E   W  G                    
Sbjct: 182 LYGQNDNFHPENSHVLPALMRRFHEAKANNADEVVVWGSGSPLREFLHVDDLADACVFLM 241

Query: 245 EEYSDLGHLNVGSGKEVSIKELAELVKEVVGFEGDLVGIKSKPDGNSKELMDSSKLAD-- 272
           ++YS   H+NVGSG EV+IKELAELVKEVVGF+G LV   +KPDG  ++LMDSSKLA   
Sbjct: 242 DQYSGFEHVNVGSGVEVTIKELAELVKEVVGFKGKLVWDTTKPDGTPRKLMDSSKLASLG 301

[Close]

BLAST of IVF0012156 vs. TAIR 10
Match: AT1G17890.2 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 346.7 bits (888), Expect = 1.8e-95
Identity = 193/314 (61.46%), Postives = 218/314 (69.43%), Query Frame = 0


Query: 13  SVLFDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQSDVESFFANEKP 72
           S + +KSAKIFVAGHRGLVGSAIVRKLQ  GFTNL+LR+HSELDLT QSDVESFFA EKP
Sbjct: 5   SFMLEKSAKIFVAGHRGLVGSAIVRKLQDQGFTNLVLRTHSELDLTSQSDVESFFATEKP 64

Query: 73  RFVILAAAKV---------------------------AYRYGVEKLLFLGSSCIYPKFAP 132
            +VILAAAKV                           AY +GV+KLLFLGSSCIYPKFAP
Sbjct: 65  VYVILAAAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYTHGVKKLLFLGSSCIYPKFAP 124

Query: 133 QPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYKWDAISGMPTNLYGPNDNFHPE 192
           QPIPE ALLTGPLEPTNEWYA+AKIAGIKMCQAYR+Q++WDAISGMPTNLYG NDNFHPE
Sbjct: 125 QPIPESALLTGPLEPTNEWYAIAKIAGIKMCQAYRLQHQWDAISGMPTNLYGQNDNFHPE 184

Query: 193 NSHVLPALMRRFMRQRLK---EQKKWWFG--------------------EEYSDLGHLNV 252
           NSHVLPALMRRF   +     E   W  G                    ++YS   H+NV
Sbjct: 185 NSHVLPALMRRFHEAKANNADEVVVWGSGSPLREFLHVDDLADACVFLMDQYSGFEHVNV 244

Query: 253 GSGKEVSIKELAELVKEVVGFEGDLVGIKSKPDGNSKELMDSSKLAD--W---VGIQRSL 272
           GSG EV+IKELAELVKEVVGF+G LV   +KPDG  ++LMDSSKLA   W   + ++  L
Sbjct: 245 GSGVEVTIKELAELVKEVVGFKGKLVWDTTKPDGTPRKLMDSSKLASLGWTPKISLKDGL 304

[Close]

BLAST of IVF0012156 vs. TAIR 10
Match: AT1G17890.3 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 346.7 bits (888), Expect = 1.8e-95
Identity = 193/314 (61.46%), Postives = 218/314 (69.43%), Query Frame = 0


Query: 13  SVLFDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQSDVESFFANEKP 72
           S + +KSAKIFVAGHRGLVGSAIVRKLQ  GFTNL+LR+HSELDLT QSDVESFFA EKP
Sbjct: 5   SFMLEKSAKIFVAGHRGLVGSAIVRKLQDQGFTNLVLRTHSELDLTSQSDVESFFATEKP 64

Query: 73  RFVILAAAKV---------------------------AYRYGVEKLLFLGSSCIYPKFAP 132
            +VILAAAKV                           AY +GV+KLLFLGSSCIYPKFAP
Sbjct: 65  VYVILAAAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYTHGVKKLLFLGSSCIYPKFAP 124

Query: 133 QPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYKWDAISGMPTNLYGPNDNFHPE 192
           QPIPE ALLTGPLEPTNEWYA+AKIAGIKMCQAYR+Q++WDAISGMPTNLYG NDNFHPE
Sbjct: 125 QPIPESALLTGPLEPTNEWYAIAKIAGIKMCQAYRLQHQWDAISGMPTNLYGQNDNFHPE 184

Query: 193 NSHVLPALMRRFMRQRLK---EQKKWWFG--------------------EEYSDLGHLNV 252
           NSHVLPALMRRF   +     E   W  G                    ++YS   H+NV
Sbjct: 185 NSHVLPALMRRFHEAKANNADEVVVWGSGSPLREFLHVDDLADACVFLMDQYSGFEHVNV 244

Query: 253 GSGKEVSIKELAELVKEVVGFEGDLVGIKSKPDGNSKELMDSSKLAD--W---VGIQRSL 272
           GSG EV+IKELAELVKEVVGF+G LV   +KPDG  ++LMDSSKLA   W   + ++  L
Sbjct: 245 GSGVEVTIKELAELVKEVVGFKGKLVWDTTKPDGTPRKLMDSSKLASLGWTPKISLKDGL 304

[Close]

BLAST of IVF0012156 vs. TAIR 10
Match: AT1G73250.1 (GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1 )

HSP 1 Score: 344.7 bits (883), Expect = 6.7e-95
Identity = 192/322 (59.63%), Postives = 224/322 (69.57%), Query Frame = 0


Query: 5   ADNSSSGSSVLFDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQSDVE 64
           A+   S  S + DKSAKIFVAGHRGLVGSAIVRKLQ+ GFTNL+L++H+ELDLTRQ+DVE
Sbjct: 2   AETIGSEVSSMSDKSAKIFVAGHRGLVGSAIVRKLQEQGFTNLVLKTHAELDLTRQADVE 61

Query: 65  SFFANEKPRFVILAAAKV---------------------------AYRYGVEKLLFLGSS 124
           SFF+ EKP +VILAAAKV                           AY +GV+KLLFLGSS
Sbjct: 62  SFFSQEKPVYVILAAAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYEHGVKKLLFLGSS 121

Query: 125 CIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYKWDAISGMPTNLYG 184
           CIYPKFAPQPIPE ALLT  LEPTNEWYA+AKIAGIK CQAYRIQ+ WDAISGMPTNLYG
Sbjct: 122 CIYPKFAPQPIPESALLTASLEPTNEWYAIAKIAGIKTCQAYRIQHGWDAISGMPTNLYG 181

Query: 185 PNDNFHPENSHVLPALMRRFMRQRL---KEQKKWWFG--------------------EEY 244
           PNDNFHPENSHVLPALMRRF   ++   +E   W  G                    + Y
Sbjct: 182 PNDNFHPENSHVLPALMRRFHEAKVNGAEEVVVWGTGSPLREFLHVDDLADACVFLLDRY 241

Query: 245 SDLGHLNVGSGKEVSIKELAELVKEVVGFEGDLVGIKSKPDGNSKELMDSSKLAD--W-- 272
           S L H+N+GSG+EV+I+ELAELVKEVVGFEG L    +KPDG  ++LMDSSKLA   W  
Sbjct: 242 SGLEHVNIGSGQEVTIRELAELVKEVVGFEGKLGWDCTKPDGTPRKLMDSSKLASLGWTP 301

The following BLAST results are available for this feature:

BLAST of IVF0012156 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LMU0	6.5e-95	60.62	Putative GDP-L-fucose synthase 2 OS=Arabidopsis thaliana OX=3702 GN=GER2 PE=1 SV...	[more]
O49213	9.4e-94	59.63	GDP-L-fucose synthase 1 OS=Arabidopsis thaliana OX=3702 GN=GER1 PE=1 SV=3	[more]
Q67WR2	3.3e-86	59.06	Probable GDP-L-fucose synthase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os0...	[more]
Q67WR5	1.1e-62	47.65	Putative GDP-L-fucose synthase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os0...	[more]
P55353	4.3e-62	48.38	GDP-L-fucose synthase OS=Sinorhizobium fredii (strain NBRC 101917 / NGR234) OX=3...	[more]

BLAST of IVF0012156 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BBR3	1.4e-116	77.26	GDP-L-fucose synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold54...	[more]
A0A1S3BTW0	3.1e-116	76.92	GDP-L-fucose synthase OS=Cucumis melo OX=3656 GN=LOC103493500 PE=3 SV=1	[more]
A0A0A0LH41	5.3e-116	76.59	GDP-L-fucose synthase OS=Cucumis sativus OX=3659 GN=Csa_2G036660 PE=3 SV=1	[more]
A0A6J1G3B1	1.8e-111	74.58	GDP-L-fucose synthase OS=Cucurbita moschata OX=3662 GN=LOC111450399 PE=3 SV=1	[more]
A0A6J1KKK7	3.0e-111	73.91	GDP-L-fucose synthase OS=Cucurbita maxima OX=3661 GN=LOC111493996 PE=3 SV=1	[more]

BLAST of IVF0012156 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0043095.1	2.65e-148	77.26	putative GDP-L-fucose synthase 2 [Cucumis melo var. makuwa] >TYJ96394.1 putative...	[more]
XP_008452484.1	7.57e-148	76.92	PREDICTED: putative GDP-L-fucose synthase 2 [Cucumis melo] >XP_016902552.1 PREDI...	[more]
XP_004144717.1	1.53e-147	76.59	putative GDP-L-fucose synthase 2 [Cucumis sativus] >KGN61068.1 hypothetical prot...	[more]
XP_038889124.1	1.38e-143	75.25	putative GDP-L-fucose synthase 2 [Benincasa hispida]	[more]
XP_023521193.1	4.57e-142	74.58	putative GDP-L-fucose synthase 2 [Cucurbita pepo subsp. pepo] >KAG7030077.1 puta...	[more]

BLAST of IVF0012156 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G17890.1	4.6e-96	60.62	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT1G17890.2	1.8e-95	61.46	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT1G17890.3	1.8e-95	61.46	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT1G73250.1	6.7e-95	59.63	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.720		coord: 84..190 e-value: 1.1E-24 score: 89.0
None	No IPR available	GENE3D	3.40.50.720		coord: 191..259 e-value: 1.1E-8 score: 37.1
None	No IPR available	GENE3D	3.40.50.720		coord: 4..83 e-value: 7.5E-15 score: 56.7
None	No IPR available	PANTHER	PTHR43238:SF5	GDP-L-FUCOSE SYNTHASE 2-RELATED	coord: 9..83
None	No IPR available	PANTHER	PTHR43238:SF5	GDP-L-FUCOSE SYNTHASE 2-RELATED	coord: 191..249
None	No IPR available	PANTHER	PTHR43238:SF5	GDP-L-FUCOSE SYNTHASE 2-RELATED	coord: 83..182
None	No IPR available	PANTHER	PTHR43238	GDP-L-FUCOSE SYNTHASE	coord: 191..249
None	No IPR available	PANTHER	PTHR43238	GDP-L-FUCOSE SYNTHASE	coord: 83..182 coord: 9..83
IPR001509	NAD-dependent epimerase/dehydratase	PFAM	PF01370	Epimerase	coord: 82..195 e-value: 3.9E-30 score: 105.1
IPR029903	RmlD-like substrate binding domain	PFAM	PF04321	RmlD_sub_bind	coord: 21..81 e-value: 2.7E-6 score: 26.7
IPR028614	GDP-L-fucose synthase/GDP-L-colitose synthase	CDD	cd05239	GDP_FS_SDR_e	coord: 21..247 e-value: 2.20782E-121 score: 346.876
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 18..255

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0012156.2	IVF0012156.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042351	'de novo' GDP-L-fucose biosynthetic process
biological_process	GO:0009226	nucleotide-sugar biosynthetic process
molecular_function	GO:0050577	GDP-L-fucose synthase activity
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0016491	oxidoreductase activity