IVF0012073 (gene) Melon (IVF77) v1

Overview
NameIVF0012073
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCarbamoyl-phosphate synthase small chain
Locationchr10: 4353233 .. 4357255 (-)
RNA-Seq ExpressionIVF0012073
SyntenyIVF0012073
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCAAACTCTCTAACGCCATAGCCATTAGCTCCTCCACACGCACCGAACCACAACCAGAAAAACCAAGCGAAAGCTTACAGAAGTTGACGCAATTTCATACGTAATCTCCTTTTTCGGATTTTTATGTGATTGTTTTCGCTATTTATATAATTCAGCTTTCCATTTTTCTAGTGCGCTTTGATGTGGATGTATGTGTTTTGTAGCGATTCGTTGTTGTGTTTTCAATTTCAATTTCAATTTCAACTTGTTCTTCTTTTGGATTTTAAAGTTTCTTTGTATTCTCCGTTGTTTTTTTTTTCTCTCAGAAGGCGACCACCACTTTGAAGAAGCTAAACTTCTCTTTCTGCTAATCACTGAAGCACCCATTTGATCAATGGCGATCAGGGTTATGGACTTGGTTTCTGGAGCTTCCTTGAATTGTTTTCATTTCAAAAATCCTAAAGGATGTGTGAAATCTAGGAGTTTCTCTATTAGATGCTCTGTTCCTCTTTCTTCATCCCAGGGCGCTGCCACGATTGGTACTAGGAGGAGTTTCCCTTTTTTTGCATGTTTATTTTGTTTTTTTAAAGATATTTTGGAGTGATTATGGTTTTGTTTCATTGTTTTAAGATTTGGGCGAGCGGCCATGGAAGGTGTCGGATGCTCGCCTGGTGCTTGAAGATGGTTCAGTTTGGAAGGCCAAGTCTTTTGGCGCTTCTGGAACCCAAGTTGGTGAAGTGGTTTTCAATACTTCTTTGACTGGGTATGTACTTTTGTGGGAGCTTTCAGTACATTTCTACTCTAAATATCATGGCACTTTAGCTATTACAGTTCCGTTTATTTATTTTAGGTTTCATCCTGAATCATCGTCCCTTCAGGAACTTGTTTTGTTTTATTTTTTTTTCAGAAAAAGAAAGGTGTGGGTGACCTACAACATTTGGATGTCAAGAAAATCTGTAGATATTAAATTCTATATGGGTGGTCATCCTAGATAAAATTCATTGCTTCTAAGTTCTTTATTAAACTCATGGCCCTTATCGACCACCAGACCATGATGGTCGTTGAGGATCCGAAATTTGGAAGTAATGATAGTTCGTGTTCATTTATATCACCTGGTCCAATATCAGTTAAATTGTTTTAGTTACAATCAAAAATTGAATATCGAGGTGGATGTTTAGATAGAACTTAGAAGACACTAGGGATGGCCATCAACACATCAGTTTTCGTTAGTTGATTTTGTTGGCCACCGATACATCAATAAACAATCCATGAAGTTTATTGATGCCTCCCAATACGATGAATCTGCAGGTATCAAGAAATTCTAACAGATCCCAGCTACGCTGGACAGTTTGTGCTGATGACAAATCCCCATATTGGCAATACTGGTGTCAATTTCGGTAGGTCATGCCTTAAAACTCCTTGTGTTGCCTTGTCTTGAGAAATGTTTAATAATATTGACTTTGAGTATCTTTTTCCAATTAGATGATGAAGAAGCTAGGCAATGCTTTCTCGCTGGCCTGGTGATCAGAAGCTTAAGCATCAGGTGCATTTCTTTCTTTTTTTTTACTGTGTTTAACCACATTATTTAAACAGGCAATTAGTGAAATCATGACTTATGGCCTCGTTTGTTCGACTAATTGTTCTTCCAGCACTTCAAATTGGAGGTGTAAACAGACGCTTGGTGATTATTTAATAGAGAGAAACATCATGGGAATTTGTAAGTAATTTTATCTTAGGATTTCTCTAATGAAAATATGCGGAATCGTTTAAAATTCATCGATGCTGTTTTTTTCTCTAATCTTTAAACCTGTGGTTTGTTTTGTCATTGCGCAGATGATGTTGACACTCGTGCTATTACTCGCCGATTAAGGGAGGATGGAAGTCTTATTGGTGTTTTAAGTACTGAAAAATCAAAATCTGATGACGAGCTGTTGGAAATGTCTCGGTCATGGAACATTGTTGGTAAGGATTTGGTGCAAAAATGCAATATGTAACATTAGTGATATGCTGGAAGCTATGAGTTATATTCTTGCTTCCATTTGGCAGGTGTTGACTTAATTAGTGGTGTTTCATGCAAATCACCTTATGAATGGGTGGATAGAACAGATCTAGAATGGGAGTTCAAATCTGGTGGGCACAGTTCAGAGACCTTTCATGTGAGTGTGCTAAAACATTAGTATTATATTTATGTTTTATTTGTATTGCTACAAGCCTACGACCTGTTCGTATTTTGTATTATAGCAATGCACCTTTACACTGATACTTTATGTTTGAAAAAGGTTGTGGCATATGATTTTGGAATCAAGAGTAACATACTTAGGCGCTTGGCATCTTATGGATGCAAAATAACCGTTGTCCCTTCCACATGGGCGGCATCGGAGACCTTAAAGTTGAAGCCAGATGGGGTTCTCTTCAGCAACGGTCCCGGCGATCCATCAGCAGTTCCTTATGCTGTTGAAACAGTCAAACAACTACTTGGAAAGGTACCTGTTTTTGGAATTTGTATGGGCCATCAATTGCTTGGTCAGGCGTTGGGTGGTAAGACCTTCAAAATGAAATTTGGCCACCATGGAGGCAATCATCCCGTTCGCAACTTCCGGAACGACCGTGTAGAAATTAGTGCTCAGGTGTGGTTCTATCAAGATTTATCAACTTCATATCCATCATTCATGTTCCAATGGTTTTTATTGAGACTTCAGTGCATTCACTTATGTGTTTCTTTTCTGGCAGAATCATAACTACGCTGTCGACCCTGCATCCCTTCCCGAGGGCGTTGAAGTAACCCACATCAATCTTAATGATGGAAGCTGTGCTGGCCTTGCTTTCCCAAAGCTAAAGATTATGTCTCTTCAATACCACCCGGAAGCATCCCCGGGACCTCATGATTCTGACTCTGGTAACAAAAATTTTAGATTTACAAATGAAACTTCTATTCACTTTCTCTTTTGACATCCTACTGTTAGATTTTCCTTATCTTATCATCATTTTAGACATTAAATATGGAGGTGAATGACAATTGGGGACAAACCTTGATGTTACATAGCAAAAGGACAGAGAAATAACTTTAAATAAAAATTGTTATAGGTTTTGGCTAGAATTGAACATCAGTAGAAATTCATGGATATTAGCCATATTTAAACCATGAATGAATACATCAAAAGTTCGGTAAATTAACAATATTTGAAATATTAAAAGATATAGAAAGATTTAGTTTGTTGTGACTACTGACTAAGGGAGATGTCATCCTAATGAGTTACTATTGATCTAGAAACAAACATTCAGTCTAAAGAATCTCTATTTTCCCCACTTATTTTCAGGGTAAATATTTTTAGAGCTATGTCCACTCATGTCCAGAATTATATATATATGTATGTATATATCAGACACGTGTCCTAAGTGTGTTCAGATATACTGCACATGGACAGTTTGCCAGAAAAAACAAAGTTCCCGTACTAACTTTAACTATTGGTTGTTACATAATTGGTAGTGGTACAGTAGACTTTGAGCTTGTTTGTTATTGGTTTTCAAATGGTTAAATTCACATTTATCATGTTCAAAGTCACCCCTTTAAATGTGATTTTGAATGGATAAAGACATGCTTGGGAAATGATTTTGTATATGACAAAAAATGATGTTAGCAATTTCAAAATCACTCACACTTTACATGAGTCATATAAAGGACTATTGTCAAATCTAATCAACAGACAAAGCTACAGCATGGAATTTGCAAGTTCTTGTAATGTTTTGTGACTGACCAAAACCAAAATTTGTTTGGTTTCAGTTTTTGGAGATTTCATAGCGATGATGAAACAAGAAAAGAGAAATGCTTGAGTTGATGTGATCAAATTTTGCTCTCAAAATGGGGGCGGGGTAGTGGTTGTTGCTGCTGGTGCTGGTAATTGTTATGAAAAGGGATTGTAATATATATTTACCCTTTGATAAACTGTTTCCTTCTGTACGATCAATTGTAGCATCTCAAGCCCGTATGGTTTGCTTGAAAATATAAAAATAATATCTATTTAAATGGAGAGATTTCATTGTTA

mRNA sequence

CTCAAACTCTCTAACGCCATAGCCATTAGCTCCTCCACACGCACCGAACCACAACCAGAAAAACCAAGCGAAAGCTTACAGAAGTTGACGCAATTTCATACAAGGCGACCACCACTTTGAAGAAGCTAAACTTCTCTTTCTGCTAATCACTGAAGCACCCATTTGATCAATGGCGATCAGGGTTATGGACTTGGTTTCTGGAGCTTCCTTGAATTGTTTTCATTTCAAAAATCCTAAAGGATGTGTGAAATCTAGGAGTTTCTCTATTAGATGCTCTGTTCCTCTTTCTTCATCCCAGGGCGCTGCCACGATTGATTTGGGCGAGCGGCCATGGAAGGTGTCGGATGCTCGCCTGGTGCTTGAAGATGGTTCAGTTTGGAAGGCCAAGTCTTTTGGCGCTTCTGGAACCCAAGTTGGTGAAGTGGTTTTCAATACTTCTTTGACTGGGTATCAAGAAATTCTAACAGATCCCAGCTACGCTGGACAGTTTGTGCTGATGACAAATCCCCATATTGGCAATACTGGTGTCAATTTCGATGATGAAGAAGCTAGGCAATGCTTTCTCGCTGGCCTGGTGATCAGAAGCTTAAGCATCAGCACTTCAAATTGGAGGTGTAAACAGACGCTTGGTGATTATTTAATAGAGAGAAACATCATGGGAATTTATGATGTTGACACTCGTGCTATTACTCGCCGATTAAGGGAGGATGGAAGTCTTATTGGTGTTTTAAGTACTGAAAAATCAAAATCTGATGACGAGCTGTTGGAAATGTCTCGGTCATGGAACATTGTTGGTGTTGACTTAATTAGTGGTGTTTCATGCAAATCACCTTATGAATGGGTGGATAGAACAGATCTAGAATGGGAGTTCAAATCTGGTGGGCACAGTTCAGAGACCTTTCATGTTGTGGCATATGATTTTGGAATCAAGAGTAACATACTTAGGCGCTTGGCATCTTATGGATGCAAAATAACCGTTGTCCCTTCCACATGGGCGGCATCGGAGACCTTAAAGTTGAAGCCAGATGGGGTTCTCTTCAGCAACGGTCCCGGCGATCCATCAGCAGTTCCTTATGCTGTTGAAACAGTCAAACAACTACTTGGAAAGGTACCTGTTTTTGGAATTTGTATGGGCCATCAATTGCTTGGTCAGGCGTTGGGTGGTAAGACCTTCAAAATGAAATTTGGCCACCATGGAGGCAATCATCCCGTTCGCAACTTCCGGAACGACCGTGTAGAAATTAGTGCTCAGAATCATAACTACGCTGTCGACCCTGCATCCCTTCCCGAGGGCGTTGAAGTAACCCACATCAATCTTAATGATGGAAGCTGTGCTGGCCTTGCTTTCCCAAAGCTAAAGATTATGTCTCTTCAATACCACCCGGAAGCATCCCCGGGACCTCATGATTCTGACTCTGTTTTTGGAGATTTCATAGCGATGATGAAACAAGAAAAGAGAAATGCTTGAGTTGATGTGATCAAATTTTGCTCTCAAAATGGGGGCGGGGTAGTGGTTGTTGCTGCTGGTGCTGGTAATTGTTATGAAAAGGGATTGTAATATATATTTACCCTTTGATAAACTGTTTCCTTCTGTACGATCAATTGTAGCATCTCAAGCCCGTATGGTTTGCTTGAAAATATAAAAATAATATCTATTTAAATGGAGAGATTTCATTGTTA

Coding sequence (CDS)

ATGGCGATCAGGGTTATGGACTTGGTTTCTGGAGCTTCCTTGAATTGTTTTCATTTCAAAAATCCTAAAGGATGTGTGAAATCTAGGAGTTTCTCTATTAGATGCTCTGTTCCTCTTTCTTCATCCCAGGGCGCTGCCACGATTGATTTGGGCGAGCGGCCATGGAAGGTGTCGGATGCTCGCCTGGTGCTTGAAGATGGTTCAGTTTGGAAGGCCAAGTCTTTTGGCGCTTCTGGAACCCAAGTTGGTGAAGTGGTTTTCAATACTTCTTTGACTGGGTATCAAGAAATTCTAACAGATCCCAGCTACGCTGGACAGTTTGTGCTGATGACAAATCCCCATATTGGCAATACTGGTGTCAATTTCGATGATGAAGAAGCTAGGCAATGCTTTCTCGCTGGCCTGGTGATCAGAAGCTTAAGCATCAGCACTTCAAATTGGAGGTGTAAACAGACGCTTGGTGATTATTTAATAGAGAGAAACATCATGGGAATTTATGATGTTGACACTCGTGCTATTACTCGCCGATTAAGGGAGGATGGAAGTCTTATTGGTGTTTTAAGTACTGAAAAATCAAAATCTGATGACGAGCTGTTGGAAATGTCTCGGTCATGGAACATTGTTGGTGTTGACTTAATTAGTGGTGTTTCATGCAAATCACCTTATGAATGGGTGGATAGAACAGATCTAGAATGGGAGTTCAAATCTGGTGGGCACAGTTCAGAGACCTTTCATGTTGTGGCATATGATTTTGGAATCAAGAGTAACATACTTAGGCGCTTGGCATCTTATGGATGCAAAATAACCGTTGTCCCTTCCACATGGGCGGCATCGGAGACCTTAAAGTTGAAGCCAGATGGGGTTCTCTTCAGCAACGGTCCCGGCGATCCATCAGCAGTTCCTTATGCTGTTGAAACAGTCAAACAACTACTTGGAAAGGTACCTGTTTTTGGAATTTGTATGGGCCATCAATTGCTTGGTCAGGCGTTGGGTGGTAAGACCTTCAAAATGAAATTTGGCCACCATGGAGGCAATCATCCCGTTCGCAACTTCCGGAACGACCGTGTAGAAATTAGTGCTCAGAATCATAACTACGCTGTCGACCCTGCATCCCTTCCCGAGGGCGTTGAAGTAACCCACATCAATCTTAATGATGGAAGCTGTGCTGGCCTTGCTTTCCCAAAGCTAAAGATTATGTCTCTTCAATACCACCCGGAAGCATCCCCGGGACCTCATGATTCTGACTCTGTTTTTGGAGATTTCATAGCGATGATGAAACAAGAAAAGAGAAATGCTTGA

Protein sequence

MAIRVMDLVSGASLNCFHFKNPKGCVKSRSFSIRCSVPLSSSQGAATIDLGERPWKVSDARLVLEDGSVWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVNFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGHSSETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGDPSAVPYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSDSVFGDFIAMMKQEKRNA
Homology
[Close]
BLAST of IVF0012073 vs. ExPASy Swiss-Prot
Match: Q6YV23 (Carbamoyl-phosphate synthase small chain, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CARA PE=2 SV=2)

HSP 1 Score: 669.5 bits (1726), Expect = 2.6e-191
Identity = 313/402 (77.86%), Postives = 358/402 (89.05%), Query Frame = 0 

Query: 29  RSFSIRCSVPLSSSQGAATIDLG-ERPWKVSDARLVLEDGSVWKAKSFGASGTQVGEVVF 88
           R   +R +  +S  Q    +D G +RPWK+SDARLVLEDGSVWKAKSFGASGTQVGEVVF
Sbjct: 45  RFLGVRAAKAVSGVQSGTVVDDGVQRPWKLSDARLVLEDGSVWKAKSFGASGTQVGEVVF 104

Query: 89  NTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVNFDDEEARQCFLAGLVIRSLSISTSNW 148
           NTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVN DDEE+ +CFLAGL+IR+LSI TSNW
Sbjct: 105 NTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVNPDDEESNRCFLAGLIIRNLSICTSNW 164

Query: 149 RCKQTLGDYLIERNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLEMSRSWNI 208
           RC +TL +YL++RNIMGIYDVDTRAITRRLREDGSLIGVLST++S++DDELLEM+++W I
Sbjct: 165 RCTETLEEYLMKRNIMGIYDVDTRAITRRLREDGSLIGVLSTDQSRTDDELLEMAKNWKI 224

Query: 209 VGVDLISGVSCKSPYEWVDRTDLEWEFKSGGHSSETFHVVAYDFGIKSNILRRLASYGCK 268
           VGVDLISGV+C +PYEW D+TD EWEFK  G S+E+FHVVAYDFGIK NILRRL SYGCK
Sbjct: 225 VGVDLISGVTCDAPYEWSDKTDSEWEFKK-GQSTESFHVVAYDFGIKHNILRRLTSYGCK 284

Query: 269 ITVVPSTWAASETLKLKPDGVLFSNGPGDPSAVPYAVETVKQLLGKVPVFGICMGHQLLG 328
           ITVVP+ W ASE L LKPDGV FSNGPGDP+AVPYAV+TV++++GKVPVFGICMGHQL+G
Sbjct: 285 ITVVPANWPASEVLNLKPDGVFFSNGPGDPAAVPYAVKTVQEIIGKVPVFGICMGHQLIG 344

Query: 329 QALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQNHNYAVDPASLPEGVEVTHINLNDGS 388
           QALGGKTFKMKFGHHGGNHPV + R+ RV+ISAQNHNYAVDP SLPEGV+VTHINLND S
Sbjct: 345 QALGGKTFKMKFGHHGGNHPVCDLRSGRVDISAQNHNYAVDPESLPEGVKVTHINLNDNS 404

Query: 389 CAGLAFPKLKIMSLQYHPEASPGPHDSDSVFGDFIAMMKQEK 430
           CAGL +PK+K++SLQYHPE+SPGPHDSD  FG+FI MMK  +
Sbjct: 405 CAGLQYPKMKLLSLQYHPESSPGPHDSDLAFGEFIEMMKNNR 445

[Close]
BLAST of IVF0012073 vs. ExPASy Swiss-Prot
Match: Q9LVW7 (Carbamoyl-phosphate synthase small chain, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CARA PE=1 SV=1)

HSP 1 Score: 653.3 bits (1684), Expect = 1.9e-186
Identity = 306/400 (76.50%), Postives = 354/400 (88.50%), Query Frame = 0 

Query: 33  IRCSVPLSSSQGAATIDLGERPWKVSDARLVLEDGSVWKAKSFGASGTQVGEVVFNTSLT 92
           IRCS   +S     T  + E+PW   +ARLVLEDGS+W AKSFGA GT++ E+VFNTSLT
Sbjct: 34  IRCS---TSPLTFPTSGVVEKPWTSYNARLVLEDGSIWPAKSFGAPGTRIAELVFNTSLT 93

Query: 93  GYQEILTDPSYAGQFVLMTNPHIGNTGVNFDDEEARQCFLAGLVIRSLSISTSNWRCKQT 152
           GYQEILTDPSYAGQFVLMTNP IGNTGVN DDEE+ QCFL GLVIR+LSISTSNWRC +T
Sbjct: 94  GYQEILTDPSYAGQFVLMTNPQIGNTGVNPDDEESGQCFLTGLVIRNLSISTSNWRCTKT 153

Query: 153 LGDYLIERNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLEMSRSWNIVGVDL 212
           L DYL ER+IMG+YD+DTRAITRRLREDGSLIGVLSTE+SK+DDELL+MSRSW+IVG+DL
Sbjct: 154 LADYLTERDIMGVYDLDTRAITRRLREDGSLIGVLSTEQSKTDDELLQMSRSWDIVGIDL 213

Query: 213 ISGVSCKSPYEWVDRTDLEWEFKSGGHSSETFHVVAYDFGIKSNILRRLASYGCKITVVP 272
           IS VSCKSPYEWVD+T+ EW+F +     +++ V+AYDFGIK NILRRL+SYGC+ITVVP
Sbjct: 214 ISDVSCKSPYEWVDKTNAEWDFNTNSRDGKSYKVIAYDFGIKQNILRRLSSYGCQITVVP 273

Query: 273 STWAASETLKLKPDGVLFSNGPGDPSAVPYAVETVKQLLGKVPVFGICMGHQLLGQALGG 332
           ST+ A+E LK+ PDG+LFSNGPGDPSAVPYAVETVK+LLGKVPV+GICMGHQLLGQALGG
Sbjct: 274 STFPAAEALKMNPDGILFSNGPGDPSAVPYAVETVKELLGKVPVYGICMGHQLLGQALGG 333

Query: 333 KTFKMKFGHHGGNHPVRNFRNDRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLA 392
           KTFKMKFGHHGGNHPVRN R  +VEISAQNHNYAVDPASLP GVEVTH+NLNDGSCAGL+
Sbjct: 334 KTFKMKFGHHGGNHPVRNNRTGQVEISAQNHNYAVDPASLPGGVEVTHVNLNDGSCAGLS 393

Query: 393 FPKLKIMSLQYHPEASPGPHDSDSVFGDFIAMMKQEKRNA 433
           FP++ +MSLQYHPEASPGPHDSD+ F +FI +MK+ K+++
Sbjct: 394 FPEMNVMSLQYHPEASPGPHDSDNAFREFIELMKRSKQSS 430

[Close]
BLAST of IVF0012073 vs. ExPASy Swiss-Prot
Match: Q8YXQ7 (Carbamoyl-phosphate synthase small chain OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=carA PE=3 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 2.5e-109
Identity = 194/375 (51.73%), Postives = 260/375 (69.33%), Query Frame = 0 

Query: 60  ARLVLEDGSVWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 119
           A LVL DG+ ++  SFGA+GT +GEVVFNT +TGYQE+LTDPSY GQ V+ T P +GNTG
Sbjct: 9   ALLVLADGTAYRGWSFGATGTTIGEVVFNTGMTGYQEVLTDPSYRGQIVVFTYPELGNTG 68

Query: 120 VNFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLRE 179
           VN +DEE+ +  + G + R++    SNWR  Q+L DYL + +I GI+ +DTRA+TR++R 
Sbjct: 69  VNPEDEESARPQVRGAIARNICHKPSNWRSTQSLPDYLKQHHIPGIFGIDTRALTRKIRM 128

Query: 180 DGSLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGG- 239
            G++ G +STE     + L ++  + N+ G++L+  V+  + YEW D T   WEF   G 
Sbjct: 129 YGAMNGGISTEILDEAELLEQVQAAPNMAGLNLVREVTTSTVYEWSDPTTAVWEFNPDGT 188

Query: 240 -HSSETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGDP 299
             + E+  VVA DFG+K NILRRLASYGC++ VVP+  +  E LK  PDG+  SNGPGDP
Sbjct: 189 VKNGESLTVVALDFGVKRNILRRLASYGCRVIVVPADTSPEEILKYNPDGIFLSNGPGDP 248

Query: 300 SAVPYAVETVKQLL-GKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRV 359
           SAV   + T K LL  + P+FGICMGHQ+LG ALG +TFK+KFGH G N P       RV
Sbjct: 249 SAVTEGITTAKALLESEKPIFGICMGHQILGHALGAETFKLKFGHRGLNQPAG--LTQRV 308

Query: 360 EISAQNHNYAVDPASLPEG-VEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSD 419
           EI++QNH++A+DP SLPE  VE++H+NLND + AGL    L I S+QYHPEASPGPHD+D
Sbjct: 309 EITSQNHSFAIDPDSLPEAVVEISHLNLNDRTVAGLRHKSLPIFSVQYHPEASPGPHDAD 368

Query: 420 SVFGDFIAMMKQEKR 431
            +F  F+  M+  K+
Sbjct: 369 YLFAQFVHQMRTTKQ 381

[Close]
BLAST of IVF0012073 vs. ExPASy Swiss-Prot
Match: P74587 (Carbamoyl-phosphate synthase small chain OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=carA PE=3 SV=2)

HSP 1 Score: 391.7 bits (1005), Expect = 1.0e-107
Identity = 192/373 (51.47%), Postives = 257/373 (68.90%), Query Frame = 0 

Query: 60  ARLVLEDGSVWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 119
           A LVL DG+ +   SFGA GT VGEVVFNT +TGYQE++TDPSY GQ V  T P +GNTG
Sbjct: 9   ALLVLADGTPYPGWSFGADGTTVGEVVFNTGMTGYQEVMTDPSYCGQIVTFTYPELGNTG 68

Query: 120 VNFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLRE 179
           VN +DEE+    + G+V R+++   SNWR  Q+L DYL+E  I+GIY +DTRA+TR+LR 
Sbjct: 69  VNAEDEESIHPHVKGVVARNITRRPSNWRSTQSLPDYLVEHKIIGIYGIDTRALTRKLRS 128

Query: 180 DGSLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEF--KSG 239
            G++ G +STE  + +  L  +  + ++ G++L+  V+    YEW D T+  W+F   + 
Sbjct: 129 IGAMNGGISTEILEPEALLHHIQAAPSMAGLNLVKEVTTHEVYEWTDSTNDHWQFGPVAE 188

Query: 240 GHSSETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGDP 299
                   VVA DFG+K NILRRLASYGC++ VVP++ +A+E L+  PDG+  SNGPGDP
Sbjct: 189 QQGQPPLTVVALDFGVKRNILRRLASYGCRVIVVPASTSAAEILQYNPDGIFLSNGPGDP 248

Query: 300 SAVPYAVETVKQLL-GKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRV 359
           SAV   + T K+LL  K P+FGICMGHQ+LG +LG +TFK+KFGH G N P       +V
Sbjct: 249 SAVEEGIVTTKELLAAKKPMFGICMGHQVLGLSLGAETFKLKFGHRGLNQPCG--LEQQV 308

Query: 360 EISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSDS 419
           EI++QNH +AV   SL E VE+TH NLND + AGL   +L   S+QYHPEASPGPHD+D 
Sbjct: 309 EITSQNHGFAVTEGSLAEEVEITHFNLNDKTVAGLRHKELPFFSVQYHPEASPGPHDADY 368

Query: 420 VFGDFIAMMKQEK 430
           +F  F+ +M+Q+K
Sbjct: 369 LFEKFVKLMRQQK 379

[Close]
BLAST of IVF0012073 vs. ExPASy Swiss-Prot
Match: Q5N0L0 (Carbamoyl-phosphate synthase small chain OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=carA PE=3 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 3.7e-105
Identity = 188/371 (50.67%), Postives = 256/371 (69.00%), Query Frame = 0 

Query: 60  ARLVLEDGSVWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 119
           A LVL DGSV+   + GA+GT +GEVVFNT +TGYQE+LTDPSY GQ V  T P +GNTG
Sbjct: 19  ALLVLADGSVFHGYACGAAGTVIGEVVFNTGMTGYQEVLTDPSYCGQIVSFTYPELGNTG 78

Query: 120 VNFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLRE 179
           VN +DEE+ +  ++GL+ R+++   SNWR  ++L DYL + NI+GIY +DTRA+T+ LR 
Sbjct: 79  VNPEDEESARPQVSGLIARNVARRHSNWRADRSLPDYLQQHNIVGIYGIDTRALTQHLRS 138

Query: 180 DGSLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGH 239
            G++ G +ST     ++   E+  + ++ G++L+  V+   PYEW   T   WEF   G 
Sbjct: 139 TGAMNGGISTTILDPEELWAEVKAAPSMEGLNLVDQVTTDRPYEWQTPTSQTWEFIE-GP 198

Query: 240 SSETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGDPSA 299
           ++E+  VVA DFG+K NILRRLASYGC++ VVP+     E L+ +PDGV  SNGPGDP+ 
Sbjct: 199 TTESLTVVAIDFGVKRNILRRLASYGCRVIVVPADTPIEEILRHEPDGVFLSNGPGDPAT 258

Query: 300 VPYAVETVKQLLGK-VPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEI 359
           V   + T + LL   +P+FGIC+GHQ+LG ALG +TFK+KFGH G NHP     + +VEI
Sbjct: 259 VKNGISTAQALLQTGLPLFGICLGHQILGSALGAQTFKLKFGHRGLNHPCG--LSQQVEI 318

Query: 360 SAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSDSVF 419
           + QNH +A+   SL   VEVTH+NLND + AGL    L + S+QYHPEASPGPHDSD +F
Sbjct: 319 TGQNHGFAIAADSLGPDVEVTHLNLNDRTVAGLRHRHLPVFSVQYHPEASPGPHDSDYLF 378

Query: 420 GDFIAMMKQEK 430
             F+A+M+  +
Sbjct: 379 EQFVALMRDRQ 386

[Close]
BLAST of IVF0012073 vs. ExPASy TrEMBL
Match: A0A1S3BDW8 (carbamoyl-phosphate synthase small chain, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488827 PE=3 SV=1)

HSP 1 Score: 890.2 bits (2299), Expect = 3.5e-255
Identity = 432/432 (100.00%), Postives = 432/432 (100.00%), Query Frame = 0 

Query: 1   MAIRVMDLVSGASLNCFHFKNPKGCVKSRSFSIRCSVPLSSSQGAATIDLGERPWKVSDA 60
           MAIRVMDLVSGASLNCFHFKNPKGCVKSRSFSIRCSVPLSSSQGAATIDLGERPWKVSDA
Sbjct: 1   MAIRVMDLVSGASLNCFHFKNPKGCVKSRSFSIRCSVPLSSSQGAATIDLGERPWKVSDA 60

Query: 61  RLVLEDGSVWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV 120
           RLVLEDGSVWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV
Sbjct: 61  RLVLEDGSVWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV 120

Query: 121 NFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLRED 180
           NFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLRED
Sbjct: 121 NFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLRED 180

Query: 181 GSLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGHS 240
           GSLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGHS
Sbjct: 181 GSLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGHS 240

Query: 241 SETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGDPSAV 300
           SETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGDPSAV
Sbjct: 241 SETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGDPSAV 300

Query: 301 PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISA 360
           PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISA
Sbjct: 301 PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISA 360

Query: 361 QNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSDSVFGD 420
           QNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSDSVFGD
Sbjct: 361 QNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSDSVFGD 420

Query: 421 FIAMMKQEKRNA 433
           FIAMMKQEKRNA
Sbjct: 421 FIAMMKQEKRNA 432

[Close]
BLAST of IVF0012073 vs. ExPASy TrEMBL
Match: A0A0A0KV57 (Glutamine amidotransferase type-1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G585380 PE=3 SV=1)

HSP 1 Score: 881.7 bits (2277), Expect = 1.2e-252
Identity = 425/432 (98.38%), Postives = 429/432 (99.31%), Query Frame = 0 

Query: 1   MAIRVMDLVSGASLNCFHFKNPKGCVKSRSFSIRCSVPLSSSQGAATIDLGERPWKVSDA 60
           MAIRVMDLVSGASLNCFHFKNPKGCVKSR FSIRCSVPLSSSQGAATIDLGERPWKVSDA
Sbjct: 1   MAIRVMDLVSGASLNCFHFKNPKGCVKSRGFSIRCSVPLSSSQGAATIDLGERPWKVSDA 60

Query: 61  RLVLEDGSVWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV 120
           RLVLEDGS+WKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV
Sbjct: 61  RLVLEDGSIWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV 120

Query: 121 NFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLRED 180
           NFDDEEARQCFL GLVIRSLS+STSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLRED
Sbjct: 121 NFDDEEARQCFLTGLVIRSLSVSTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLRED 180

Query: 181 GSLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGHS 240
           GSLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSP+EWVDRTDLEWEFKSGGHS
Sbjct: 181 GSLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPFEWVDRTDLEWEFKSGGHS 240

Query: 241 SETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGDPSAV 300
           SETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKL PDGVLFSNGPGDPSAV
Sbjct: 241 SETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLNPDGVLFSNGPGDPSAV 300

Query: 301 PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISA 360
           PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISA
Sbjct: 301 PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISA 360

Query: 361 QNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSDSVFGD 420
           QNHNYAVDPASLPEGVEVTHINLNDGSCAGL+FPKLKIMSLQYHPEASPGPHDSDSVFGD
Sbjct: 361 QNHNYAVDPASLPEGVEVTHINLNDGSCAGLSFPKLKIMSLQYHPEASPGPHDSDSVFGD 420

Query: 421 FIAMMKQEKRNA 433
           FIAMMKQEKRNA
Sbjct: 421 FIAMMKQEKRNA 432

[Close]
BLAST of IVF0012073 vs. ExPASy TrEMBL
Match: A0A6J1JPA8 (carbamoyl-phosphate synthase small chain, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111486271 PE=3 SV=1)

HSP 1 Score: 861.3 bits (2224), Expect = 1.7e-246
Identity = 415/432 (96.06%), Postives = 424/432 (98.15%), Query Frame = 0 

Query: 1   MAIRVMDLVSGASLNCFHFKNPKGCVKSRSFSIRCSVPLSSSQGAATIDLGERPWKVSDA 60
           MAIRVMDLVSGASLNCFHFKNPKG   SR FSIRCSVPLSSS GAATIDLGERPWKVSDA
Sbjct: 1   MAIRVMDLVSGASLNCFHFKNPKGHQNSRDFSIRCSVPLSSSHGAATIDLGERPWKVSDA 60

Query: 61  RLVLEDGSVWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV 120
           RLVLEDGS+W AKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV
Sbjct: 61  RLVLEDGSIWSAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV 120

Query: 121 NFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLRED 180
           NFDDEEAR+CFLAGLVIRSLSISTSNWRCKQTLGDYL+ERNIMGIYDVDTRAITRRLRED
Sbjct: 121 NFDDEEARECFLAGLVIRSLSISTSNWRCKQTLGDYLMERNIMGIYDVDTRAITRRLRED 180

Query: 181 GSLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGHS 240
           GSLIGVLSTEKSKSDDELLEMSRSW+IVGVDLISGVSCKSPYEWVDRT LEWEFKSGGHS
Sbjct: 181 GSLIGVLSTEKSKSDDELLEMSRSWDIVGVDLISGVSCKSPYEWVDRTSLEWEFKSGGHS 240

Query: 241 SETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGDPSAV 300
           SETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGDPSAV
Sbjct: 241 SETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGDPSAV 300

Query: 301 PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISA 360
           PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFR++RVEISA
Sbjct: 301 PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRDNRVEISA 360

Query: 361 QNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSDSVFGD 420
           QNHNYAVDPASLPEG+EVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSDSVFGD
Sbjct: 361 QNHNYAVDPASLPEGIEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSDSVFGD 420

Query: 421 FIAMMKQEKRNA 433
           F+ MMKQEKRN+
Sbjct: 421 FVEMMKQEKRNS 432

[Close]
BLAST of IVF0012073 vs. ExPASy TrEMBL
Match: A0A6J1H064 (carbamoyl-phosphate synthase small chain, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111458831 PE=3 SV=1)

HSP 1 Score: 861.3 bits (2224), Expect = 1.7e-246
Identity = 416/432 (96.30%), Postives = 424/432 (98.15%), Query Frame = 0 

Query: 1   MAIRVMDLVSGASLNCFHFKNPKGCVKSRSFSIRCSVPLSSSQGAATIDLGERPWKVSDA 60
           MAIRVMDLVSG SLNCFHFKNPKG  KSR FSIRCSVPLSSS GAATIDLGERPWKVSDA
Sbjct: 1   MAIRVMDLVSGVSLNCFHFKNPKGHQKSRDFSIRCSVPLSSSHGAATIDLGERPWKVSDA 60

Query: 61  RLVLEDGSVWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV 120
           RLVLEDGS+W+AKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV
Sbjct: 61  RLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV 120

Query: 121 NFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLRED 180
           NFDDEEAR+CFLAGLVIRSLSISTSNWRCKQTLGDYL ERNIMGIYDVDTRAITRRLRED
Sbjct: 121 NFDDEEARECFLAGLVIRSLSISTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRRLRED 180

Query: 181 GSLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGHS 240
           GSLIGVLSTEKSKSDDELLEMSRSW+IVGVDLISGVSCKSPYEWV+RT LEWEFKSGGHS
Sbjct: 181 GSLIGVLSTEKSKSDDELLEMSRSWDIVGVDLISGVSCKSPYEWVNRTSLEWEFKSGGHS 240

Query: 241 SETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGDPSAV 300
           SETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAA+ETLKLKPDGVLFSNGPGDPSAV
Sbjct: 241 SETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAATETLKLKPDGVLFSNGPGDPSAV 300

Query: 301 PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISA 360
           PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFR+DRVEISA
Sbjct: 301 PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRDDRVEISA 360

Query: 361 QNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSDSVFGD 420
           QNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSDSVFGD
Sbjct: 361 QNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSDSVFGD 420

Query: 421 FIAMMKQEKRNA 433
           FI MMKQEKRN+
Sbjct: 421 FIEMMKQEKRNS 432

[Close]
BLAST of IVF0012073 vs. ExPASy TrEMBL
Match: A0A5D3CV98 (Carbamoyl-phosphate synthase small chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002870 PE=3 SV=1)

HSP 1 Score: 857.8 bits (2215), Expect = 1.9e-245
Identity = 416/416 (100.00%), Postives = 416/416 (100.00%), Query Frame = 0 

Query: 1   MAIRVMDLVSGASLNCFHFKNPKGCVKSRSFSIRCSVPLSSSQGAATIDLGERPWKVSDA 60
           MAIRVMDLVSGASLNCFHFKNPKGCVKSRSFSIRCSVPLSSSQGAATIDLGERPWKVSDA
Sbjct: 1   MAIRVMDLVSGASLNCFHFKNPKGCVKSRSFSIRCSVPLSSSQGAATIDLGERPWKVSDA 60

Query: 61  RLVLEDGSVWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV 120
           RLVLEDGSVWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV
Sbjct: 61  RLVLEDGSVWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV 120

Query: 121 NFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLRED 180
           NFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLRED
Sbjct: 121 NFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLRED 180

Query: 181 GSLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGHS 240
           GSLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGHS
Sbjct: 181 GSLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGHS 240

Query: 241 SETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGDPSAV 300
           SETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGDPSAV
Sbjct: 241 SETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGDPSAV 300

Query: 301 PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISA 360
           PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISA
Sbjct: 301 PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISA 360

Query: 361 QNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSDS 417
           QNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSDS
Sbjct: 361 QNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSDS 416

[Close]
BLAST of IVF0012073 vs. NCBI nr
Match: XP_008445953.1 (PREDICTED: carbamoyl-phosphate synthase small chain, chloroplastic [Cucumis melo])

HSP 1 Score: 878 bits (2268), Expect = 0.0
Identity = 432/432 (100.00%), Postives = 432/432 (100.00%), Query Frame = 0 

Query: 1   MAIRVMDLVSGASLNCFHFKNPKGCVKSRSFSIRCSVPLSSSQGAATIDLGERPWKVSDA 60
           MAIRVMDLVSGASLNCFHFKNPKGCVKSRSFSIRCSVPLSSSQGAATIDLGERPWKVSDA
Sbjct: 1   MAIRVMDLVSGASLNCFHFKNPKGCVKSRSFSIRCSVPLSSSQGAATIDLGERPWKVSDA 60

Query: 61  RLVLEDGSVWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV 120
           RLVLEDGSVWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV
Sbjct: 61  RLVLEDGSVWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV 120

Query: 121 NFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLRED 180
           NFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLRED
Sbjct: 121 NFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLRED 180

Query: 181 GSLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGHS 240
           GSLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGHS
Sbjct: 181 GSLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGHS 240

Query: 241 SETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGDPSAV 300
           SETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGDPSAV
Sbjct: 241 SETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGDPSAV 300

Query: 301 PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISA 360
           PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISA
Sbjct: 301 PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISA 360

Query: 361 QNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSDSVFGD 420
           QNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSDSVFGD
Sbjct: 361 QNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSDSVFGD 420

Query: 421 FIAMMKQEKRNA 432
           FIAMMKQEKRNA
Sbjct: 421 FIAMMKQEKRNA 432

[Close]
BLAST of IVF0012073 vs. NCBI nr
Match: XP_004135360.1 (carbamoyl-phosphate synthase small chain, chloroplastic [Cucumis sativus] >XP_031741440.1 carbamoyl-phosphate synthase small chain, chloroplastic [Cucumis sativus] >XP_031741441.1 carbamoyl-phosphate synthase small chain, chloroplastic [Cucumis sativus] >KGN51611.1 hypothetical protein Csa_008769 [Cucumis sativus])

HSP 1 Score: 869 bits (2246), Expect = 0.0
Identity = 425/432 (98.38%), Postives = 429/432 (99.31%), Query Frame = 0 

Query: 1   MAIRVMDLVSGASLNCFHFKNPKGCVKSRSFSIRCSVPLSSSQGAATIDLGERPWKVSDA 60
           MAIRVMDLVSGASLNCFHFKNPKGCVKSR FSIRCSVPLSSSQGAATIDLGERPWKVSDA
Sbjct: 1   MAIRVMDLVSGASLNCFHFKNPKGCVKSRGFSIRCSVPLSSSQGAATIDLGERPWKVSDA 60

Query: 61  RLVLEDGSVWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV 120
           RLVLEDGS+WKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV
Sbjct: 61  RLVLEDGSIWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV 120

Query: 121 NFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLRED 180
           NFDDEEARQCFL GLVIRSLS+STSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLRED
Sbjct: 121 NFDDEEARQCFLTGLVIRSLSVSTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLRED 180

Query: 181 GSLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGHS 240
           GSLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSP+EWVDRTDLEWEFKSGGHS
Sbjct: 181 GSLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPFEWVDRTDLEWEFKSGGHS 240

Query: 241 SETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGDPSAV 300
           SETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKL PDGVLFSNGPGDPSAV
Sbjct: 241 SETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLNPDGVLFSNGPGDPSAV 300

Query: 301 PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISA 360
           PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISA
Sbjct: 301 PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISA 360

Query: 361 QNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSDSVFGD 420
           QNHNYAVDPASLPEGVEVTHINLNDGSCAGL+FPKLKIMSLQYHPEASPGPHDSDSVFGD
Sbjct: 361 QNHNYAVDPASLPEGVEVTHINLNDGSCAGLSFPKLKIMSLQYHPEASPGPHDSDSVFGD 420

Query: 421 FIAMMKQEKRNA 432
           FIAMMKQEKRNA
Sbjct: 421 FIAMMKQEKRNA 432

[Close]
BLAST of IVF0012073 vs. NCBI nr
Match: XP_023514547.1 (carbamoyl-phosphate synthase small chain, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 852 bits (2201), Expect = 1.32e-311
Identity = 418/432 (96.76%), Postives = 424/432 (98.15%), Query Frame = 0 

Query: 1   MAIRVMDLVSGASLNCFHFKNPKGCVKSRSFSIRCSVPLSSSQGAATIDLGERPWKVSDA 60
           MAIRVMDLVSG SLNCFHFKNPKG  KSR FSIRCSVPLSSS GAATIDLGERPWKVSDA
Sbjct: 1   MAIRVMDLVSGVSLNCFHFKNPKGHQKSRDFSIRCSVPLSSSHGAATIDLGERPWKVSDA 60

Query: 61  RLVLEDGSVWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV 120
           RLVLEDGS+W+AKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV
Sbjct: 61  RLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV 120

Query: 121 NFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLRED 180
           NFDDEEAR+CFLAGLVIRSLSISTSNWRCKQTLGDYL ERNIMGIYDVDTRAITRRLRED
Sbjct: 121 NFDDEEARECFLAGLVIRSLSISTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRRLRED 180

Query: 181 GSLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGHS 240
           GSLIGVLSTEKSKSDDELLEMSRSW+IVGVDLISGVSCKSPYEWVDRT LEWEFKSGGHS
Sbjct: 181 GSLIGVLSTEKSKSDDELLEMSRSWDIVGVDLISGVSCKSPYEWVDRTSLEWEFKSGGHS 240

Query: 241 SETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGDPSAV 300
           SETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGDPSAV
Sbjct: 241 SETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGDPSAV 300

Query: 301 PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISA 360
           PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFR+DRVEISA
Sbjct: 301 PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRDDRVEISA 360

Query: 361 QNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSDSVFGD 420
           QNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSDSVFGD
Sbjct: 361 QNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSDSVFGD 420

Query: 421 FIAMMKQEKRNA 432
           FI MMKQEKRN+
Sbjct: 421 FIEMMKQEKRNS 432

[Close]
BLAST of IVF0012073 vs. NCBI nr
Match: XP_038893406.1 (carbamoyl-phosphate synthase small chain, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 849 bits (2193), Expect = 2.18e-310
Identity = 416/431 (96.52%), Postives = 424/431 (98.38%), Query Frame = 0 

Query: 1   MAIRVMDLVSGASLNCFHFKNPKGCVKSRSFSIRCSVPLSSSQGAATIDLGERPWKVSDA 60
           MAIRVMDLVSGAS NCFHFKN KG VKSR FSIRCSVPLSS+ GAATIDLGERPWKVSDA
Sbjct: 1   MAIRVMDLVSGASFNCFHFKNAKGYVKSRDFSIRCSVPLSSTHGAATIDLGERPWKVSDA 60

Query: 61  RLVLEDGSVWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV 120
           RLVLEDGS+W+AKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV
Sbjct: 61  RLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV 120

Query: 121 NFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLRED 180
           NFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLRED
Sbjct: 121 NFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLRED 180

Query: 181 GSLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGHS 240
           GSLIGVLSTEKSKSDDELLEMSRSW+IVGVDLISGVSCKSPYEWVDRTD EWEFKSGG+S
Sbjct: 181 GSLIGVLSTEKSKSDDELLEMSRSWDIVGVDLISGVSCKSPYEWVDRTDSEWEFKSGGYS 240

Query: 241 SETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGDPSAV 300
           S+TFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGDPSAV
Sbjct: 241 SKTFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGDPSAV 300

Query: 301 PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISA 360
           PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRN+RVEISA
Sbjct: 301 PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNNRVEISA 360

Query: 361 QNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSDSVFGD 420
           QNHNYA+DPASLPEGVEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSDSVFGD
Sbjct: 361 QNHNYAIDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSDSVFGD 420

Query: 421 FIAMMKQEKRN 431
           FI MMKQEKRN
Sbjct: 421 FIEMMKQEKRN 431

[Close]
BLAST of IVF0012073 vs. NCBI nr
Match: XP_022989099.1 (carbamoyl-phosphate synthase small chain, chloroplastic-like [Cucurbita maxima] >XP_022989108.1 carbamoyl-phosphate synthase small chain, chloroplastic-like [Cucurbita maxima] >XP_022989117.1 carbamoyl-phosphate synthase small chain, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 849 bits (2193), Expect = 2.18e-310
Identity = 415/432 (96.06%), Postives = 424/432 (98.15%), Query Frame = 0 

Query: 1   MAIRVMDLVSGASLNCFHFKNPKGCVKSRSFSIRCSVPLSSSQGAATIDLGERPWKVSDA 60
           MAIRVMDLVSGASLNCFHFKNPKG   SR FSIRCSVPLSSS GAATIDLGERPWKVSDA
Sbjct: 1   MAIRVMDLVSGASLNCFHFKNPKGHQNSRDFSIRCSVPLSSSHGAATIDLGERPWKVSDA 60

Query: 61  RLVLEDGSVWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV 120
           RLVLEDGS+W AKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV
Sbjct: 61  RLVLEDGSIWSAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV 120

Query: 121 NFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLRED 180
           NFDDEEAR+CFLAGLVIRSLSISTSNWRCKQTLGDYL+ERNIMGIYDVDTRAITRRLRED
Sbjct: 121 NFDDEEARECFLAGLVIRSLSISTSNWRCKQTLGDYLMERNIMGIYDVDTRAITRRLRED 180

Query: 181 GSLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGHS 240
           GSLIGVLSTEKSKSDDELLEMSRSW+IVGVDLISGVSCKSPYEWVDRT LEWEFKSGGHS
Sbjct: 181 GSLIGVLSTEKSKSDDELLEMSRSWDIVGVDLISGVSCKSPYEWVDRTSLEWEFKSGGHS 240

Query: 241 SETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGDPSAV 300
           SETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGDPSAV
Sbjct: 241 SETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGDPSAV 300

Query: 301 PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISA 360
           PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFR++RVEISA
Sbjct: 301 PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRDNRVEISA 360

Query: 361 QNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSDSVFGD 420
           QNHNYAVDPASLPEG+EVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSDSVFGD
Sbjct: 361 QNHNYAVDPASLPEGIEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSDSVFGD 420

Query: 421 FIAMMKQEKRNA 432
           F+ MMKQEKRN+
Sbjct: 421 FVEMMKQEKRNS 432

[Close]
BLAST of IVF0012073 vs. TAIR 10
Match: AT3G27740.1 (carbamoyl phosphate synthetase A )

HSP 1 Score: 653.3 bits (1684), Expect = 1.4e-187
Identity = 306/400 (76.50%), Postives = 354/400 (88.50%), Query Frame = 0 

Query: 33  IRCSVPLSSSQGAATIDLGERPWKVSDARLVLEDGSVWKAKSFGASGTQVGEVVFNTSLT 92
           IRCS   +S     T  + E+PW   +ARLVLEDGS+W AKSFGA GT++ E+VFNTSLT
Sbjct: 34  IRCS---TSPLTFPTSGVVEKPWTSYNARLVLEDGSIWPAKSFGAPGTRIAELVFNTSLT 93

Query: 93  GYQEILTDPSYAGQFVLMTNPHIGNTGVNFDDEEARQCFLAGLVIRSLSISTSNWRCKQT 152
           GYQEILTDPSYAGQFVLMTNP IGNTGVN DDEE+ QCFL GLVIR+LSISTSNWRC +T
Sbjct: 94  GYQEILTDPSYAGQFVLMTNPQIGNTGVNPDDEESGQCFLTGLVIRNLSISTSNWRCTKT 153

Query: 153 LGDYLIERNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLEMSRSWNIVGVDL 212
           L DYL ER+IMG+YD+DTRAITRRLREDGSLIGVLSTE+SK+DDELL+MSRSW+IVG+DL
Sbjct: 154 LADYLTERDIMGVYDLDTRAITRRLREDGSLIGVLSTEQSKTDDELLQMSRSWDIVGIDL 213

Query: 213 ISGVSCKSPYEWVDRTDLEWEFKSGGHSSETFHVVAYDFGIKSNILRRLASYGCKITVVP 272
           IS VSCKSPYEWVD+T+ EW+F +     +++ V+AYDFGIK NILRRL+SYGC+ITVVP
Sbjct: 214 ISDVSCKSPYEWVDKTNAEWDFNTNSRDGKSYKVIAYDFGIKQNILRRLSSYGCQITVVP 273

Query: 273 STWAASETLKLKPDGVLFSNGPGDPSAVPYAVETVKQLLGKVPVFGICMGHQLLGQALGG 332
           ST+ A+E LK+ PDG+LFSNGPGDPSAVPYAVETVK+LLGKVPV+GICMGHQLLGQALGG
Sbjct: 274 STFPAAEALKMNPDGILFSNGPGDPSAVPYAVETVKELLGKVPVYGICMGHQLLGQALGG 333

Query: 333 KTFKMKFGHHGGNHPVRNFRNDRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLA 392
           KTFKMKFGHHGGNHPVRN R  +VEISAQNHNYAVDPASLP GVEVTH+NLNDGSCAGL+
Sbjct: 334 KTFKMKFGHHGGNHPVRNNRTGQVEISAQNHNYAVDPASLPGGVEVTHVNLNDGSCAGLS 393

Query: 393 FPKLKIMSLQYHPEASPGPHDSDSVFGDFIAMMKQEKRNA 433
           FP++ +MSLQYHPEASPGPHDSD+ F +FI +MK+ K+++
Sbjct: 394 FPEMNVMSLQYHPEASPGPHDSDNAFREFIELMKRSKQSS 430

[Close]
BLAST of IVF0012073 vs. TAIR 10
Match: AT3G27740.2 (carbamoyl phosphate synthetase A )

HSP 1 Score: 500.4 bits (1287), Expect = 1.5e-141
Identity = 247/400 (61.75%), Postives = 287/400 (71.75%), Query Frame = 0 

Query: 33  IRCSVPLSSSQGAATIDLGERPWKVSDARLVLEDGSVWKAKSFGASGTQVGEVVFNTSLT 92
           IRCS   +S     T  + E+PW   +ARLVLEDGS+W AKSFGA GT++ E+VFNTSLT
Sbjct: 34  IRCS---TSPLTFPTSGVVEKPWTSYNARLVLEDGSIWPAKSFGAPGTRIAELVFNTSLT 93

Query: 93  GYQEILTDPSYAGQFVLMTNPHIGNTGVNFDDEEARQCFLAGLVIRSLSISTSNWRCKQT 152
           GYQEILTDPSYAGQFVLMTNP IGNTGVN                               
Sbjct: 94  GYQEILTDPSYAGQFVLMTNPQIGNTGVN------------------------------- 153

Query: 153 LGDYLIERNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLEMSRSWNIVGVDL 212
                                                     DDELL+MSRSW+IVG+DL
Sbjct: 154 -----------------------------------------PDDELLQMSRSWDIVGIDL 213

Query: 213 ISGVSCKSPYEWVDRTDLEWEFKSGGHSSETFHVVAYDFGIKSNILRRLASYGCKITVVP 272
           IS VSCKSPYEWVD+T+ EW+F +     +++ V+AYDFGIK NILRRL+SYGC+ITVVP
Sbjct: 214 ISDVSCKSPYEWVDKTNAEWDFNTNSRDGKSYKVIAYDFGIKQNILRRLSSYGCQITVVP 273

Query: 273 STWAASETLKLKPDGVLFSNGPGDPSAVPYAVETVKQLLGKVPVFGICMGHQLLGQALGG 332
           ST+ A+E LK+ PDG+LFSNGPGDPSAVPYAVETVK+LLGKVPV+GICMGHQLLGQALGG
Sbjct: 274 STFPAAEALKMNPDGILFSNGPGDPSAVPYAVETVKELLGKVPVYGICMGHQLLGQALGG 333

Query: 333 KTFKMKFGHHGGNHPVRNFRNDRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLA 392
           KTFKMKFGHHGGNHPVRN R  +VEISAQNHNYAVDPASLP GVEVTH+NLNDGSCAGL+
Sbjct: 334 KTFKMKFGHHGGNHPVRNNRTGQVEISAQNHNYAVDPASLPGGVEVTHVNLNDGSCAGLS 358

Query: 393 FPKLKIMSLQYHPEASPGPHDSDSVFGDFIAMMKQEKRNA 433
           FP++ +MSLQYHPEASPGPHDSD+ F +FI +MK+ K+++
Sbjct: 394 FPEMNVMSLQYHPEASPGPHDSDNAFREFIELMKRSKQSS 358

[Close]
BLAST of IVF0012073 vs. TAIR 10
Match: AT1G25220.1 (anthranilate synthase beta subunit 1 )

HSP 1 Score: 73.2 bits (178), Expect = 5.9e-13
Identity = 52/165 (31.52%), Postives = 78/165 (47.27%), Query Frame = 0 

Query: 256 NILRRLASYGCKITVVPSTWAASETLKLK-PDGVLFSNGPGDPSAVPYAVETVKQLLGKV 315
           N+ + +   GC   V  +     E LK K P GVL S GPG P     +++TV +L   V
Sbjct: 87  NLCQYMGELGCHFEVYRNDELTVEELKKKNPRGVLISPGPGTPQDSGISLQTVLELGPLV 146

Query: 316 PVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVE----------ISAQNHN 375
           P+FG+CMG Q +G+A GGK  +  FG   G   + ++     E          I  + H+
Sbjct: 147 PLFGVCMGLQCIGEAFGGKIVRSPFGVMHGKSSMVHYDEKGEEGLFSGLSNPFIVGRYHS 206

Query: 376 YAVDPASLP-EGVEVTHINLNDGSCAGLAFPKLK-IMSLQYHPEA 408
             ++  + P + +EVT     DG        K K I  +Q+HPE+
Sbjct: 207 LVIEKDTFPSDELEVTAWT-EDGLVMAARHRKYKHIQGVQFHPES 250

[Close]
BLAST of IVF0012073 vs. TAIR 10
Match: AT5G57890.1 (Glutamine amidotransferase type 1 family protein )

HSP 1 Score: 72.4 bits (176), Expect = 1.0e-12
Identity = 51/165 (30.91%), Postives = 78/165 (47.27%), Query Frame = 0 

Query: 256 NILRRLASYGCKITVVPSTWAASETLK-LKPDGVLFSNGPGDPSAVPYAVETVKQLLGKV 315
           N+ + +   GC   V  +     E LK  KP G+L S GPG P     +++TV +L   V
Sbjct: 84  NLCQYMGELGCHFEVYRNDELTVEELKRKKPRGLLISPGPGTPQDSGISLQTVLELGPLV 143

Query: 316 PVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVE----------ISAQNHN 375
           P+FG+CMG Q +G+A GGK  +  FG   G   + ++     E          +  + H+
Sbjct: 144 PLFGVCMGLQCIGEAFGGKIVRSPFGVMHGKSSMVHYDEKGEEGLFSGLSNPFLVGRYHS 203

Query: 376 YAVDPASLP-EGVEVTHINLNDGSCAGLAFPKLK-IMSLQYHPEA 408
             ++  S P + +EVT     DG        K K I  +Q+HPE+
Sbjct: 204 LVIEKDSFPSDELEVTAWT-EDGLVMAARHRKYKHIQGVQFHPES 247

[Close]
BLAST of IVF0012073 vs. TAIR 10
Match: AT1G25220.2 (anthranilate synthase beta subunit 1 )

HSP 1 Score: 71.6 bits (174), Expect = 1.7e-12
Identity = 52/163 (31.90%), Postives = 77/163 (47.24%), Query Frame = 0 

Query: 258 LRRLASYGCKITVVPSTWAASETLKLK-PDGVLFSNGPGDPSAVPYAVETVKQLLGKVPV 317
           L+ +   GC   V  +     E LK K P GVL S GPG P     +++TV +L   VP+
Sbjct: 102 LQYMGELGCHFEVYRNDELTVEELKKKNPRGVLISPGPGTPQDSGISLQTVLELGPLVPL 161

Query: 318 FGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVE----------ISAQNHNYA 377
           FG+CMG Q +G+A GGK  +  FG   G   + ++     E          I  + H+  
Sbjct: 162 FGVCMGLQCIGEAFGGKIVRSPFGVMHGKSSMVHYDEKGEEGLFSGLSNPFIVGRYHSLV 221

Query: 378 VDPASLP-EGVEVTHINLNDGSCAGLAFPKLK-IMSLQYHPEA 408
           ++  + P + +EVT     DG        K K I  +Q+HPE+
Sbjct: 222 IEKDTFPSDELEVTAWT-EDGLVMAARHRKYKHIQGVQFHPES 263

The following BLAST results are available for this feature:
BLAST of IVF0012073 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q6YV232.6e-19177.86Carbamoyl-phosphate synthase small chain, chloroplastic OS=Oryza sativa subsp. j... [more]
Q9LVW71.9e-18676.50Carbamoyl-phosphate synthase small chain, chloroplastic OS=Arabidopsis thaliana ... [more]
Q8YXQ72.5e-10951.73Carbamoyl-phosphate synthase small chain OS=Nostoc sp. (strain PCC 7120 / SAG 25... [more]
P745871.0e-10751.47Carbamoyl-phosphate synthase small chain OS=Synechocystis sp. (strain PCC 6803 /... [more]
Q5N0L03.7e-10550.67Carbamoyl-phosphate synthase small chain OS=Synechococcus sp. (strain ATCC 27144... [more]
BLAST of IVF0012073 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BDW83.5e-255100.00carbamoyl-phosphate synthase small chain, chloroplastic OS=Cucumis melo OX=3656 ... [more]
A0A0A0KV571.2e-25298.38Glutamine amidotransferase type-1 domain-containing protein OS=Cucumis sativus O... [more]
A0A6J1JPA81.7e-24696.06carbamoyl-phosphate synthase small chain, chloroplastic-like OS=Cucurbita maxima... [more]
A0A6J1H0641.7e-24696.30carbamoyl-phosphate synthase small chain, chloroplastic-like OS=Cucurbita moscha... [more]
A0A5D3CV981.9e-245100.00Carbamoyl-phosphate synthase small chain OS=Cucumis melo var. makuwa OX=1194695 ... [more]
BLAST of IVF0012073 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008445953.10.0100.00PREDICTED: carbamoyl-phosphate synthase small chain, chloroplastic [Cucumis melo... [more]
XP_004135360.10.098.38carbamoyl-phosphate synthase small chain, chloroplastic [Cucumis sativus] >XP_03... [more]
XP_023514547.11.32e-31196.76carbamoyl-phosphate synthase small chain, chloroplastic-like [Cucurbita pepo sub... [more]
XP_038893406.12.18e-31096.52carbamoyl-phosphate synthase small chain, chloroplastic isoform X2 [Benincasa hi... [more]
XP_022989099.12.18e-31096.06carbamoyl-phosphate synthase small chain, chloroplastic-like [Cucurbita maxima] ... [more]
BLAST of IVF0012073 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G27740.11.4e-18776.50carbamoyl phosphate synthetase A [more]
AT3G27740.21.5e-14161.75carbamoyl phosphate synthetase A [more]
AT1G25220.15.9e-1331.52anthranilate synthase beta subunit 1 [more]
AT5G57890.11.0e-1230.91Glutamine amidotransferase type 1 family protein [more]
AT1G25220.21.7e-1231.90anthranilate synthase beta subunit 1 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00099CPSGATASEcoord: 315..331
score: 65.86
coord: 246..260
score: 55.8
coord: 357..368
score: 58.15
coord: 285..299
score: 64.35
coord: 332..349
score: 56.52
NoneNo IPR availablePRINTSPR00096GATASEcoord: 400..413
score: 45.62
coord: 288..297
score: 54.96
coord: 315..326
score: 62.32
NoneNo IPR availablePRINTSPR00097ANTSNTHASEIIcoord: 400..413
score: 30.91
coord: 315..326
score: 55.0
coord: 288..297
score: 48.91
NoneNo IPR availablePANTHERPTHR11405CARBAMOYLTRANSFERASE FAMILY MEMBERcoord: 28..430
NoneNo IPR availablePANTHERPTHR11405:SF4CARBAMOYL-PHOSPHATE SYNTHASE ARGININE-SPECIFIC SMALL CHAINcoord: 28..430
NoneNo IPR availablePROSITEPS51273GATASE_TYPE_1coord: 245..431
score: 29.512321
IPR002474Carbamoyl-phosphate synthase small subunit, N-terminal domainSMARTSM01097CPSase_sm_chain_2coord: 58..188
e-value: 1.7E-77
score: 273.5
IPR002474Carbamoyl-phosphate synthase small subunit, N-terminal domainPFAMPF00988CPSase_sm_chaincoord: 60..186
e-value: 9.8E-48
score: 161.2
IPR017926Glutamine amidotransferasePFAMPF00117GATasecoord: 249..423
e-value: 1.3E-45
score: 155.5
IPR029062Class I glutamine amidotransferase-likeGENE3D3.40.50.880coord: 207..430
e-value: 6.6E-71
score: 240.4
IPR029062Class I glutamine amidotransferase-likeSUPERFAMILY52317Class I glutamine amidotransferase-likecoord: 221..427
IPR036480Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamilyGENE3D3.50.30.20coord: 57..206
e-value: 1.6E-55
score: 188.5
IPR036480Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamilySUPERFAMILY52021Carbamoyl phosphate synthetase, small subunit N-terminal domaincoord: 59..202
IPR006274Carbamoyl-phosphate synthase, small subunitTIGRFAMTIGR01368TIGR01368coord: 60..427
e-value: 6.5E-148
score: 490.4
IPR006274Carbamoyl-phosphate synthase, small subunitHAMAPMF_01209CPSase_S_chaincoord: 58..429
score: 45.555614
IPR035686Carbamoyl-phosphate synthase small subunit, GATase1 domainCDDcd01744GATase1_CPSasecoord: 246..422
e-value: 2.7793E-113
score: 327.916

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0012073.1IVF0012073.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006526 arginine biosynthetic process
biological_process GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process
biological_process GO:0006541 glutamine metabolic process
cellular_component GO:0005951 carbamoyl-phosphate synthase complex
molecular_function GO:0004088 carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity