IVF0012003 (gene) Melon (IVF77) v1

Overview


Name	IVF0012003
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Protein Ycf2-like
Location	chr11: 13594902 .. 13602086 (-)
RNA-Seq Expression	IVF0012003
Synteny	IVF0012003

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCGCTACACCAATTGAAGTTGGAATCTCATATTTTGCACCATTCCTGGAGACAGAAAAAGATATATACAAAGAAGCAAAGGATGAGCTTCGAAAGACCCAAAATTCTGACCGCGTAGCCCATGTTTCGCTGAATAGAGGCATGCCCTCTACAAGTGGGATTGATGCCTGACTAGAATGGTATAAAAGATTAAGAAGAGCCAAAGAGGATGAAGACAAGTATGGAAGGTATTCTTGAGTTTCTTAAATCTATAGAATTGAAAATGAATATTCGGTTTGAAGAACTAGGGCAGAAGATGAATGGAATAAGAGAAGCAATAAGGTGCCAACAATCTAGTTCTGCGGGTGCCCAATACGCCAATGAATTTATGGCAAGCATGTTCTGTAGACTTCAATAATATCTGTGTGCATCTTAACAAATACACTGTATTTGGTATGTATTTGTTACGCAGGGAGCAAGGGCGTTTGAAGAGCACCTTGACAAGGTGGAGGAGGACCAAGAAGAAGATGACATTGAAGATTTAAACTTGGGTTCAAGCAATCCAAAGGTGCTTGGAAAAATGGATAATGATGAAGACAAAGATGGACAAGGGCTCATGGATGAAAGTCGAACACAAACTTCCAGAGGGCAAGATGGTGGACAACCTAAAATGACACAATCAGGCACACAACCAACAACTGGAGATAAAGATTGTTTGCCATATAAGGTAAAGAAAAAAATCAAATTGTTGAAGCTATGTATAATACATATTATAAACTAACATATGTACATAATTGTAATAGGCCACGGAGGAAACCGAGGAGGAGATAAACAGGTTGATACGGTCAATCAATGAAAGTGTTATATATGATGAAATGAAGAAAAAAGAAGACAACAGGGAACCTAGGTAGTTCATTTTCAAATTTGAGGATGCTCAATGATAGGAGAGACTTCTTTTTATTTCTTTTGAGGGATAAATGCGTTGTCTAAAACCCATCGGAGATTTTTTGTAACTTCATCCCAAGAAAGGAGTCTTGGAACACTAACAGATGATTTATTGAGATTTTTTCTATCAACATAGTTTTTCCTTTAGTTGAAGACAATAAAGCTTTTGAATGCATAGTAGTAGTCAAAACTTTATAAGTGACTTTGTAAACAAGGGTTTAATTTTTTAACTCCTTCTTCAAAATTTAAGCCTTGGCCAGTAATGTCTAAGCTCAAGGTTTTGAGAATATGTGGGTCATCAAGAGACACCATAAAAATTGGAAAACAATTAAAATATACAGGACCATTGACCAAATTTGATTCAATTATTCCTAATAAAGAATTTGAAAAATCTTTATGGCGTTTATCGCGTAAAATTGCTAAGACTGGTGTATCCAGTCCGAATCTAAACATTGGAATTAAAGCTACTTGGACAGCTCCTATATGAAGAAACGAAAATTCTTTTTGATGTTTTCAATATCATTTCTTGAAAATAATTGTATGGAATCAATTTTTCCATAAACTGGAATTCTTCTTTCAACAATTTTTACACAAAGATTTTCTTCGAAGTTGAAAGTATTTTGAAAATAAATTGTCTTTGAATCAAGTTTGGGAATTCTCCAATTGAGAAAATCATTTTCTAGTTTTGCAATACGAATTGATTCATTTGTTACATCACCTTCACTAGAAGAAGCAGCATGATGCTCCTCAATTTCTTTTTGAGTAAGATCTTTTGACGAAGATTTAGGGGATAAATTTTTTTTTCAGGAAATTAGATATTTGAAAATTTTAAATTCTCATACTATAAATATCTATTTTTCAAAATTTTATTAAATCTAGAAATAAAATTTCTTAGATCAAGAATCTATACTTGTATGTGCTAAGACGGATTACTGCTGACCAACGGTCTCACCGCGCTTCCTTCCGTCTTACTGTCGGGACCACAAACTTAGACACGGACGTACAGGCGGACGTAGAATCTGAGTCTTCAAAATTAAATCTCTTGAATTCAACAAAATTTTGAAGAATAAATTTTATTGAAGAGAACTTAAATTTATCAAACTCTTCTCCCGTGGAAATGAAATTTGAAAACGAATCACCTAGGTTCCCTGTTGTTAAAGAAAACATGAATTCTACAGACTTCATGAGTTTAAGATCAAGTACTTCTAGTAAAAGTGAGTCAATGCCTAATCTCAAAATCAGATCTGTCAAAATAGATCAAGGAATACCAAATATTATTTATGAAGAAAATCTCCCAAACTCTCCAACTCAAACAGAAATGGATAGTAGTTCTCAATTAAATGTAATTATTTCAAAATCAAAGTTTGAGCTTGACAAAGAATCTCTTCAAAAGAAATTTATGTCTAAAGAAAGCCTTATTGAATGAATTGCTTCTTTCAAGAACTATTCTGAAACAGAAAGGAAGCTGTTTAGAGAAGAGTATTTCAAAACCCTTGAAATACTTCAAGAGCATATTGCAGTTTTTAGATGGTTTAATCAAAGAAAAGAATTTGACCATCTTTGTACTATCAAAGTAAAAGAATCATGGAAAACTCAAAGAGGTGAAATCAAAGCTGATTTTCCACCAATGGAAGATGTAGAGTTCAAAAGTTTTTATAACGAGAATGTTATTGCAAAACCCTTTCAAATCATCAAAGAATCAGAAGAGCATAAAGCCCTTACAAACAAGGAAATAAAAATTTCCAAGTTCAAAATAACTATTTAAATAGAATGCTTTCTTCAATCGCAACCCAAGTTTTTAAATTAGAAGAAATCATCAATCCTCCTTCTCGAGAAGAAATTCCTAGTCTCTTCCAACCTTTGGAAAAGGTAAGAAAAAACCCAGAAACAAAAACTTCTAAATGAGATTAAGAAACGCTTGGAAAGCTTAAAGGGCGAAAGTTCGATCAAAGTCATTAATGAAGAAGATGCAGCCCAATTCATGGAAGATTTTGAAAATCTCTCTGTCAATGAAGAAGAAAACAAATCAATAAACTAAATTTTGGAAGGTATATCAATAAGAGAGATCAAATTAATTTCTATCCTTGACCTTCATTTCAAGGAGAAGGATTAGAGCAAAAACAAAGATATTCAATAAATACTGAGTTTAATAGAGAATCTATATATGTTTAGAACCTTGATGGAACCCCAGAATTTCAAATCTATGACATATTAAATAATATGTTGACTTGTGTCATAGCCTACGAATCTAATGGTCATTTAGATAGAGAAGTCGCCATGCTTCTAATTAATGGATTTAGTGGAAGTCTCAAATTGTGGTGGGATCATGCCCTAAGTACTGAACAAAAAGAAGCAATAAAAAGACATAAGACAAAGGTTAGAAGGATAATTAAAGTCGAAGAAGGAACTTCAACAACTCAAGAGGTAGAAGAAGAAATAGAGAATGCTGTAGAAACCCTTCTCTATGCAATTAACTTGCACTTCGGCCTAGGAAGTGACACTGATGAAGAAAATCAAAGGAAAATAATAAAAAATCTAAAGTGCTCCTCTATGGAAAATTTTAGATGGTATAAAGATATGTTCTTACTAAGAATTTATATTTTCAAAGACTGCAATACTAGACACAGGAAAGAAATGTTCATTGATGGACTTCCTAGCTTTATGACAGAAAGTGTATACAACCATTACTACAAAACTGGGTTTATTTGACGCTTTTATAATTGATATACTTGACAGTTTTAATAAAAATTGTCAAGAAACATAAAAAAGTGTCAAGAATAAGAAAGAGTGAAAAAACCCATATTTTTGTTTTTTCTTTTGTTTTAAATACTTGACAGATTAAAAACGTCAAAATTAATTTTAATTACTTGACATTTAAAAAATGTCAACTAATATATATTTTTCAATAATTTTAATTCCCCTTTTAATTTAACTTTCCCAAATTTCTCCTTCTCCCCCAATCTTCCGTTTGCCGCGTGCTAATATGAAAAGCCCTAACTTGTTCGACATCGTCTCTTCTGTCTGCTTCTGTCTGCTTGGTGTTCATTGTCGCTCGCAAGCCATTGCCGCCTCTTTTGTCTGCGTGTCATTTCGTCGTTGCCCGTGGTTGCTCGTTGCTCATGGTTGCGCGTTCTGTTCGTGGTCGCTCGCAAGCAGGTTCGTTGCTTCATCGTGGCCCTTTCCCGTGGTTACACGGCAGCTGTTGATGTATTAGAGCATTTCTCTATTCACCAATCTGGGCAGTCTCTTCTCTATAGCATGCTGCAGAACAATGAATTTAAAGCAGCTGAGAAATGGGCCACTTTCATGGGAAATCCAATGTTACATTTGCTTGTCCAGGACTTGATAAATAGAAACAAGCTAAAAAGTGCATATGGAGTTATAAAGAAAAATGATTTGCAGAAGGAATTTCCCGATGTCTATCAGAAGTGTAAGAGAGGTACTTTGGTAACCCTATGCTGTATTTTTCTTCTTTGAACTCAAATTTTCATGTGCTCTTGGTATTTTTATATGTCTCCATTGACTTAAAAGCCTATGAATAATTATGATTCTTACTCAGCTCCTTGAAGAATTTAGCCGAAGAAGGATGTTGGGATGGTGCTGAGGCAAAAATAAACAGCAATAGGCAATTTCTTGAATATTTGGTTAGTATACTCCATACATTCATTACTCATATTTTGAAGATTTTTAAGCAATACATATACTTCATTACAAGCAAAATGTCTTACCTGTTGGACCTGAGTTCTGGGTTTTTGACAAATAGTTTTTAAAGCTCAAAGTCTTCATATCTTTACGTAACCTTTATGTGTTTAAGGTTTACTTGGCATTGGAAGCTGGTTATTTCAAAAAAGTTGATGAACTTTGCAATAGGTACTCCCTTACAGGTTTTCTGAATAACAAAGGTATGACGTCTGTACCATAGTCTCTTGCACTTAGAAGCTTCCTTGCATATGTTGGGCCATTTTTCCAGCTTTAATAAGATCAATATCTCATGTTAGACTATTATTATTCAGAAGTGTTTCTACGAACTATCTTGTTGGCCTTTGTCCATTCCCTATTACCCTTAGTCATTCCTTTTTACCTTTTGTTCTTTATTGCCCCAAGTTTGTCCACTTTATTTGTTTTTTAATTGGATAAATATAGGCATCTCGCAGAAAATTTTGCAAGTAGAAAATAAAGAGCTAAAAGGCGCTGCAAGAAAACAAAGAATTGGTTGAATGCCTCTAGGAATTGCTTCCATGGGCATTGAGAAGTGGAGTTGTCGGATCTAGTGAATAAACCACAGAAATCCTTATCATAATTCCTAGGTGATTAAAGCTTTTGTTAGGACACTGGTCATGTTCTTTTATTCCTAAAAAAGATTTAAACTGCCTTCATAATAAGGAAAAGAATGTACTTGCTGACCAAAAAAGGTAAAACATAACCTAGTGAGCTACACAATTTTACCATGGCATTAAGAAGGGCCTTTTCCTTCTCATGTTGATCACCCAATGAAGGAAGGTAGAGTATTTGTTACCCTTAGTGAGCTACTCAATTTTACCTGTGTTTTGACAAAGAGAAAATTAGTGTAAACGTAAAATTAATATCATTTAGCCTAAACTAATTTATTATATTTTTAGCTTATTAACACATTATTGTATTAAAAACTTAGGAACACAAATTATCTTTGACCTGCCTAATCTTCTGGGCAGTTATCAATTCAATTGTAAATTATCTTTGAGTAACATAGGATGGTTTCCACTATTAGGGACAAATCTTGGTTTCTGTACATTATATGACTTCAGTGTTTTTGAACATTATCTACAAAAAAAAAAAATTAGCATGCTTCGAATCACTACAGTTAAATTTTATTTGCATTGCACAAAATTTTACTTGTTCTGATTCATATTGGTTAATCTAATCAGCATATTGGTTTTCTGTAGAACGTAAGGGAAGTTATGGACAGAAGTTACCGAACCACTATTTGAATCTTAATCAACTAATTGCTGGAGATATTTATGGGTTGACAATGCTGATGCTTTACATCATGCAACACGCCATATCGAGGAGTGTAGTTGTAGGTATTGATTGTGAGTGGAAACCTAACTATATAAAGGGCAAGAAACAGAACAAGGTAATCACTGATAAATTATTTTTTCTCTCTATTTGTGCTTTTCTCCTCCAATTCCTTTCTTATATCGTTGTATCTGAGCTGGTTGTATTTTATTTTTATTTTTTAATCTTATAAGAACGTTGAAGTAACAAATGCACCTATTATTTTGTTTGAGCTTCTCATAATCATTGTCTGGCATAAACACATACCTTATGTTCTTATAAAAAGAAAATAGGAAAAGAATTCTATTAATCACAATTCTTGAAGTCGGTGGCTACAATAGTTTTAAGTCTGTGAAATGAGGGTGGGAGTTGACATGGTTGCGCATATATCCCTGCAGCATGAAAATATTTTCAAGATATGCTTCTATCTATCATGTTAAAATTAGATTTATACTTTATTTATTCCATTGTATGATATTGCTCTCATTGAGATTTTTTTTCGTACTCATGCTCTGCATATAGTTTTGTTCCTTGAGGATCAGCTTGATTCCAGCCAAACCTTTATTCTATCATTCCCTTGTTTGCGTCACTACTTTTGGAATCGTTCAAGTTTTACAAGAATAGAATGCAACCTCTATTAGACTGTGAAATATAAATATAAATTGCCAACAAAGTTTACTCTTTTACTTTTCTTTCTTAGAAAGGGAAAAAGTTAAAGACTTGTTTGTTTTCTGATATTTACTAGTGATTTTGTTTAATTTAATTTTCTTTTTTTCCTTATCCTTTTTATCCATTCGCTTTCTAACTCAGTGCATATAATGTGCAGTGGTCCTGGTAAACTATTGTTTTAGGCTTCATTTTCCTATTGTTTCTTCTAGAAACAAGGCATATAGTAAGTGGATTCAACAAATTATATTTATTGTTGTGATTTATGTTTGCATAATGGCTCTTTCTAGTTGTTTTTATTGTCGGTGTAAACATATTTATTTGTTTATTAAAGGTATACGTATATGGGCTATTTGCAACGTTAAGCATTTAGGTAATTTATGTATTACAGTGTCCTTTACAAGTCGGAACCACTAAATTGGGAGTTATGATGTGGAAGTATCTTCTTTGAGGCATGAAATAAAAGAGTTAAATGAGAGGTTGGAAACCGCAAATGCAAGGGCTCAATCGTTTGAGAAGAAGCAAGGATATTGCAACAAGAAAAAGTTCATATTGTAA

mRNA sequence

ATGCTCGCTACACCAATTGAAGTTGGAATCTCATATTTTGCACCATTCCTGGAGACAGAAAAAGATATATACAAAGAAGCAAAGGATGAGCTTCGAAAGACCCAAAATTCTGACCGCGTAGCCCATGGAGCAAGGGCGTTTGAAGAGCACCTTGACAAGGTGGAGGAGGACCAAGAAGAAGATGACATTGAAGATTTAAACTTGGGTTCAAGCAATCCAAAGGTGCTTGGAAAAATGGATAATGATGAAGACAAAGATGGACAAGGGCTCATGGATGAAAGTCGAACACAAACTTCCAGAGGGCAAGATGGTGGACAACCTAAAATGACACAATCAGGCACACAACCAACAACTGGAGATAAAGATTGTTTGCCATATAAGGCCACGGAGGAAACCGAGGAGGAGATAAACAGGTTGATACGGTCAATCAATGAAAGTGTTATATATGATGAAATGAAGAAAAAAGAAGACAACAGGGAACCTAGCCATTGCCGCCTCTTTTGTCTGCGTGTCATTTCGTCGTTGCCCGTGGTTGCTCGTTGCTCATGGTTGCGCGTTCTGTTCGTGGTCGCTCGCAAGCAGGTTCGTTGCTTCATCGTGGCCCTTTCCCGTGGTTACACGGCAGCTGTTGATGTATTAGAGCATTTCTCTATTCACCAATCTGGGCAGTCTCTTCTCTATAGCATGCTGCAGAACAATGAATTTAAAGCAGCTGAGAAATGGGCCACTTTCATGGGAAATCCAATGTTACATTTGCTTGTCCAGGACTTGATAAATAGAAACAAGCTAAAAAGTGCATATGGAGTTATAAAGAAAAATGATTTGCAGAAGGAATTTCCCGATGTCTATCAGAAGTGTAAGAGAGAACGTAAGGGAAGTTATGGACAGAAGTTACCGAACCACTATTTGAATCTTAATCAACTAATTGCTGGAGATATTTATGGGTTGACAATGCTGATGCTTTACATCATGCAACACGCCATATCGAGGAGTGTAGTTGTAGGTATTGATTGTGAGTGGAAACCTAACTATATAAAGGGCAAGAAACAGAACAAGAAAGGGAAAAAGTTAAAGACTTGTATACGTATATGGGCTATTTGCAACGTTAAGCATTTAGTATCTTCTTTGAGGCATGAAATAAAAGAGTTAAATGAGAGGTTGGAAACCGCAAATGCAAGGGCTCAATCGTTTGAGAAGAAGCAAGGATATTGCAACAAGAAAAAGTTCATATTGTAA

Coding sequence (CDS)

ATGCTCGCTACACCAATTGAAGTTGGAATCTCATATTTTGCACCATTCCTGGAGACAGAAAAAGATATATACAAAGAAGCAAAGGATGAGCTTCGAAAGACCCAAAATTCTGACCGCGTAGCCCATGGAGCAAGGGCGTTTGAAGAGCACCTTGACAAGGTGGAGGAGGACCAAGAAGAAGATGACATTGAAGATTTAAACTTGGGTTCAAGCAATCCAAAGGTGCTTGGAAAAATGGATAATGATGAAGACAAAGATGGACAAGGGCTCATGGATGAAAGTCGAACACAAACTTCCAGAGGGCAAGATGGTGGACAACCTAAAATGACACAATCAGGCACACAACCAACAACTGGAGATAAAGATTGTTTGCCATATAAGGCCACGGAGGAAACCGAGGAGGAGATAAACAGGTTGATACGGTCAATCAATGAAAGTGTTATATATGATGAAATGAAGAAAAAAGAAGACAACAGGGAACCTAGCCATTGCCGCCTCTTTTGTCTGCGTGTCATTTCGTCGTTGCCCGTGGTTGCTCGTTGCTCATGGTTGCGCGTTCTGTTCGTGGTCGCTCGCAAGCAGGTTCGTTGCTTCATCGTGGCCCTTTCCCGTGGTTACACGGCAGCTGTTGATGTATTAGAGCATTTCTCTATTCACCAATCTGGGCAGTCTCTTCTCTATAGCATGCTGCAGAACAATGAATTTAAAGCAGCTGAGAAATGGGCCACTTTCATGGGAAATCCAATGTTACATTTGCTTGTCCAGGACTTGATAAATAGAAACAAGCTAAAAAGTGCATATGGAGTTATAAAGAAAAATGATTTGCAGAAGGAATTTCCCGATGTCTATCAGAAGTGTAAGAGAGAACGTAAGGGAAGTTATGGACAGAAGTTACCGAACCACTATTTGAATCTTAATCAACTAATTGCTGGAGATATTTATGGGTTGACAATGCTGATGCTTTACATCATGCAACACGCCATATCGAGGAGTGTAGTTGTAGGTATTGATTGTGAGTGGAAACCTAACTATATAAAGGGCAAGAAACAGAACAAGAAAGGGAAAAAGTTAAAGACTTGTATACGTATATGGGCTATTTGCAACGTTAAGCATTTAGTATCTTCTTTGAGGCATGAAATAAAAGAGTTAAATGAGAGGTTGGAAACCGCAAATGCAAGGGCTCAATCGTTTGAGAAGAAGCAAGGATATTGCAACAAGAAAAAGTTCATATTGTAA

Protein sequence

MLATPIEVGISYFAPFLETEKDIYKEAKDELRKTQNSDRVAHGARAFEEHLDKVEEDQEEDDIEDLNLGSSNPKVLGKMDNDEDKDGQGLMDESRTQTSRGQDGGQPKMTQSGTQPTTGDKDCLPYKATEETEEEINRLIRSINESVIYDEMKKKEDNREPSHCRLFCLRVISSLPVVARCSWLRVLFVVARKQVRCFIVALSRGYTAAVDVLEHFSIHQSGQSLLYSMLQNNEFKAAEKWATFMGNPMLHLLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKRERKGSYGQKLPNHYLNLNQLIAGDIYGLTMLMLYIMQHAISRSVVVGIDCEWKPNYIKGKKQNKKGKKLKTCIRIWAICNVKHLVSSLRHEIKELNERLETANARAQSFEKKQGYCNKKKFIL

Homology

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BLAST of IVF0012003 vs. ExPASy TrEMBL
Match: A0A5D3BPW6 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold264G001250 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 2.8e-81
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MLATPIEVGISYFAPFLETEKDIYKEAKDELRKTQNSDRVAHGARAFEEHLDKVEEDQEE 60
           MLATPIEVGISYFAPFLETEKDIYKEAKDELRKTQNSDRVAHGARAFEEHLDKVEEDQEE
Sbjct: 1   MLATPIEVGISYFAPFLETEKDIYKEAKDELRKTQNSDRVAHGARAFEEHLDKVEEDQEE 60

Query: 61  DDIEDLNLGSSNPKVLGKMDNDEDKDGQGLMDESRTQTSRGQDGGQPKMTQSGTQPTTGD 120
           DDIEDLNLGSSNPKVLGKMDNDEDKDGQGLMDESRTQTSRGQDGGQPKMTQSGTQPTTGD
Sbjct: 61  DDIEDLNLGSSNPKVLGKMDNDEDKDGQGLMDESRTQTSRGQDGGQPKMTQSGTQPTTGD 120

Query: 121 KDCLPYKATEETEEEINRLIRSINESVIYDEMKKKEDNREP 162
           KDCLPYKATEETEEEINRLIRSINESVIYDEMKKKEDNREP
Sbjct: 121 KDCLPYKATEETEEEINRLIRSINESVIYDEMKKKEDNREP 161

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BLAST of IVF0012003 vs. ExPASy TrEMBL
Match: A0A1S3BPE9 (uncharacterized protein LOC103492118 OS=Cucumis melo OX=3656 GN=LOC103492118 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 6.6e-54
Identity = 124/209 (59.33%), Postives = 131/209 (62.68%), Query Frame = 0


Query: 203 SRGYTAAVDVLEHFSIHQSGQSLLYSMLQNNEFKAAEKWATFMGNPMLHLLVQDLINRNK 262
           ++GYT AVDVLEHFSIHQSGQSLLYSMLQNNEFKAAEKWATFMG PMLHLLVQ+LINRNK
Sbjct: 191 TQGYTTAVDVLEHFSIHQSGQSLLYSMLQNNEFKAAEKWATFMGKPMLHLLVQELINRNK 250

Query: 263 LKSAYGVIKKNDLQKEFPDVYQKCK----------------------------------- 322
           LKSAYGVIKKNDLQKEFPDVYQKCK                                   
Sbjct: 251 LKSAYGVIKKNDLQKEFPDVYQKCKESSLKNLAEKGCWDVAEAKTNSNRQFLEYLVYLAL 310

Query: 323 -----------------------RERKGSYGQKLPNHYLNLNQLIAGDIYGLTML-MLYI 353
                                  +ER+GSYGQKL NHYLNLNQLIAGDI  +     L+ 
Sbjct: 311 EAGYFEKVDELCNRYSLTGFLNIKEREGSYGQKLTNHYLNLNQLIAGDILWVDNADALHH 370

[Close]

BLAST of IVF0012003 vs. ExPASy TrEMBL
Match: A0A5D3CG08 (Exonuclease mut-7-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004410 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 6.6e-54
Identity = 124/209 (59.33%), Postives = 131/209 (62.68%), Query Frame = 0


Query: 203 SRGYTAAVDVLEHFSIHQSGQSLLYSMLQNNEFKAAEKWATFMGNPMLHLLVQDLINRNK 262
           ++GYT AVDVLEHFSIHQSGQSLLYSMLQNNEFKAAEKWATFMG PMLHLLVQ+LINRNK
Sbjct: 149 TQGYTTAVDVLEHFSIHQSGQSLLYSMLQNNEFKAAEKWATFMGKPMLHLLVQELINRNK 208

Query: 263 LKSAYGVIKKNDLQKEFPDVYQKCK----------------------------------- 322
           LKSAYGVIKKNDLQKEFPDVYQKCK                                   
Sbjct: 209 LKSAYGVIKKNDLQKEFPDVYQKCKESSLKNLAEKGCWDVAEAKTNSNRQFLEYLVYLAL 268

Query: 323 -----------------------RERKGSYGQKLPNHYLNLNQLIAGDIYGLTML-MLYI 353
                                  +ER+GSYGQKL NHYLNLNQLIAGDI  +     L+ 
Sbjct: 269 EAGYFEKVDELCNRYSLTGFLNIKEREGSYGQKLTNHYLNLNQLIAGDILWVDNADALHH 328

[Close]

BLAST of IVF0012003 vs. ExPASy TrEMBL
Match: A0A5A7TZZ0 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001330 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 8.6e-54
Identity = 119/159 (74.84%), Postives = 136/159 (85.53%), Query Frame = 0


Query: 1   MLATPIEVGISYFAPFLETEKDIYKEAKDELRKTQNSDRVAHGARAFEEHLDKVEEDQEE 60
           MLATP EVG+ YFAPF+ETEKDI KEA+DELRKT+NSD +  GA AFEEHLDKVEEDQEE
Sbjct: 188 MLATPTEVGMPYFAPFIETEKDILKEAEDELRKTKNSDHI--GAMAFEEHLDKVEEDQEE 247

Query: 61  DDIEDLNLGSSNPKVLGKMDNDEDKDGQGLMDESRTQTSRGQDGGQPKMTQSGTQPTTGD 120
           DD+EDLNL SS+  VLGK D+DEDKDG+ L+DESR ++SRGQDGGQ K+T+S T PT  D
Sbjct: 248 DDVEDLNLDSSDRTVLGKTDDDEDKDGKRLVDESRAESSRGQDGGQSKVTKSETPPTARD 307

Query: 121 KDCLPYKATEETEEEINRLIRSINESVIYDEMKKKEDNR 160
           KD  PYKATE+T EEINRLIRSI+ESVIYDE+KKKE  R
Sbjct: 308 KDSSPYKATEKTNEEINRLIRSIDESVIYDEIKKKEHRR 344

[Close]

BLAST of IVF0012003 vs. ExPASy TrEMBL
Match: A0A0A0LWB0 (3'-5' exonuclease domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G561980 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 7.6e-50
Identity = 118/209 (56.46%), Postives = 127/209 (60.77%), Query Frame = 0


Query: 203 SRGYTAAVDVLEHFSIHQSGQSLLYSMLQNNEFKAAEKWATFMGNPMLHLLVQDLINRNK 262
           ++GY  AVDVLEHFSIHQSGQSLLY MLQNNEFKAAEKWATFMG  MLHLLVQ+LINRNK
Sbjct: 191 TQGYATAVDVLEHFSIHQSGQSLLYGMLQNNEFKAAEKWATFMGKQMLHLLVQELINRNK 250

Query: 263 LKSAYGVIKKNDLQKEFPDVYQKCK----------------------------------- 322
           LKSAYGVIKKNDLQKEFPDVYQKCK                                   
Sbjct: 251 LKSAYGVIKKNDLQKEFPDVYQKCKESSLKNLAEKGCWDVAEAKANNNRQFLEYLVYLAL 310

Query: 323 -----------------------RERKGSYGQKLPNHYLNLNQLIAGDIYGLTML-MLYI 353
                                  +ER+GSY QKLPNHYL+LNQLI G+I  +     L+ 
Sbjct: 311 EAGYFEKVDELCTRYSLTGFLNIKEREGSYEQKLPNHYLDLNQLIDGNILWIDNADALHR 370

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BLAST of IVF0012003 vs. NCBI nr
Match: TYK01098.1 (protein Ycf2-like [Cucumis melo var. makuwa])

HSP 1 Score: 314 bits (804), Expect = 1.09e-103
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MLATPIEVGISYFAPFLETEKDIYKEAKDELRKTQNSDRVAHGARAFEEHLDKVEEDQEE 60
           MLATPIEVGISYFAPFLETEKDIYKEAKDELRKTQNSDRVAHGARAFEEHLDKVEEDQEE
Sbjct: 1   MLATPIEVGISYFAPFLETEKDIYKEAKDELRKTQNSDRVAHGARAFEEHLDKVEEDQEE 60

Query: 61  DDIEDLNLGSSNPKVLGKMDNDEDKDGQGLMDESRTQTSRGQDGGQPKMTQSGTQPTTGD 120
           DDIEDLNLGSSNPKVLGKMDNDEDKDGQGLMDESRTQTSRGQDGGQPKMTQSGTQPTTGD
Sbjct: 61  DDIEDLNLGSSNPKVLGKMDNDEDKDGQGLMDESRTQTSRGQDGGQPKMTQSGTQPTTGD 120

Query: 121 KDCLPYKATEETEEEINRLIRSINESVIYDEMKKKEDNREP 161
           KDCLPYKATEETEEEINRLIRSINESVIYDEMKKKEDNREP
Sbjct: 121 KDCLPYKATEETEEEINRLIRSINESVIYDEMKKKEDNREP 161

[Close]

BLAST of IVF0012003 vs. NCBI nr
Match: KAA0048518.1 (protein Ycf2-like [Cucumis melo var. makuwa] >TYK28309.1 protein Ycf2-like [Cucumis melo var. makuwa])

HSP 1 Score: 223 bits (567), Expect = 5.38e-64
Identity = 119/159 (74.84%), Postives = 136/159 (85.53%), Query Frame = 0


Query: 1   MLATPIEVGISYFAPFLETEKDIYKEAKDELRKTQNSDRVAHGARAFEEHLDKVEEDQEE 60
           MLATP EVG+ YFAPF+ETEKDI KEA+DELRKT+NSD +  GA AFEEHLDKVEEDQEE
Sbjct: 188 MLATPTEVGMPYFAPFIETEKDILKEAEDELRKTKNSDHI--GAMAFEEHLDKVEEDQEE 247

Query: 61  DDIEDLNLGSSNPKVLGKMDNDEDKDGQGLMDESRTQTSRGQDGGQPKMTQSGTQPTTGD 120
           DD+EDLNL SS+  VLGK D+DEDKDG+ L+DESR ++SRGQDGGQ K+T+S T PT  D
Sbjct: 248 DDVEDLNLDSSDRTVLGKTDDDEDKDGKRLVDESRAESSRGQDGGQSKVTKSETPPTARD 307

Query: 121 KDCLPYKATEETEEEINRLIRSINESVIYDEMKKKEDNR 159
           KD  PYKATE+T EEINRLIRSI+ESVIYDE+KKKE  R
Sbjct: 308 KDSSPYKATEKTNEEINRLIRSIDESVIYDEIKKKEHRR 344

[Close]

BLAST of IVF0012003 vs. NCBI nr
Match: KAA0050943.1 (exonuclease mut-7-like protein isoform X1 [Cucumis melo var. makuwa] >TYK10290.1 exonuclease mut-7-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 220 bits (560), Expect = 2.50e-62
Identity = 126/211 (59.72%), Postives = 133/211 (63.03%), Query Frame = 0


Query: 203 SRGYTAAVDVLEHFSIHQSGQSLLYSMLQNNEFKAAEKWATFMGNPMLHLLVQDLINRNK 262
           ++GYT AVDVLEHFSIHQSGQSLLYSMLQNNEFKAAEKWATFMG PMLHLLVQ+LINRNK
Sbjct: 149 TQGYTTAVDVLEHFSIHQSGQSLLYSMLQNNEFKAAEKWATFMGKPMLHLLVQELINRNK 208

Query: 263 LKSAYGVIKKNDLQKEFPDVYQKCK----------------------------------- 322
           LKSAYGVIKKNDLQKEFPDVYQKCK                                   
Sbjct: 209 LKSAYGVIKKNDLQKEFPDVYQKCKESSLKNLAEKGCWDVAEAKTNSNRQFLEYLVYLAL 268

Query: 323 -----------------------RERKGSYGQKLPNHYLNLNQLIAGDIYGLTMLMLYIM 352
                                  +ER+GSYGQKL NHYLNLNQLIAGDI  L +     +
Sbjct: 269 EAGYFEKVDELCNRYSLTGFLNIKEREGSYGQKLTNHYLNLNQLIAGDI--LWVDNADAL 328

[Close]

BLAST of IVF0012003 vs. NCBI nr
Match: XP_008450552.1 (PREDICTED: uncharacterized protein LOC103492118 [Cucumis melo] >XP_008450553.1 PREDICTED: uncharacterized protein LOC103492118 [Cucumis melo])

HSP 1 Score: 220 bits (560), Expect = 7.17e-62
Identity = 126/211 (59.72%), Postives = 133/211 (63.03%), Query Frame = 0


Query: 203 SRGYTAAVDVLEHFSIHQSGQSLLYSMLQNNEFKAAEKWATFMGNPMLHLLVQDLINRNK 262
           ++GYT AVDVLEHFSIHQSGQSLLYSMLQNNEFKAAEKWATFMG PMLHLLVQ+LINRNK
Sbjct: 191 TQGYTTAVDVLEHFSIHQSGQSLLYSMLQNNEFKAAEKWATFMGKPMLHLLVQELINRNK 250

Query: 263 LKSAYGVIKKNDLQKEFPDVYQKCK----------------------------------- 322
           LKSAYGVIKKNDLQKEFPDVYQKCK                                   
Sbjct: 251 LKSAYGVIKKNDLQKEFPDVYQKCKESSLKNLAEKGCWDVAEAKTNSNRQFLEYLVYLAL 310

Query: 323 -----------------------RERKGSYGQKLPNHYLNLNQLIAGDIYGLTMLMLYIM 352
                                  +ER+GSYGQKL NHYLNLNQLIAGDI  L +     +
Sbjct: 311 EAGYFEKVDELCNRYSLTGFLNIKEREGSYGQKLTNHYLNLNQLIAGDI--LWVDNADAL 370

[Close]

BLAST of IVF0012003 vs. NCBI nr
Match: KAA0039580.1 (protein Ycf2-like [Cucumis melo var. makuwa] >TYK01720.1 protein Ycf2-like [Cucumis melo var. makuwa])

HSP 1 Score: 205 bits (522), Expect = 1.33e-58
Identity = 119/209 (56.94%), Postives = 137/209 (65.55%), Query Frame = 0


Query: 1   MLATPIEVGISYFAPFLETEKDIYKEAKDELRKTQNSDRVAH------------------ 60
           +LATP EVG+ +F PF+ETEKDI KEA+DELRKT+NSD +A                   
Sbjct: 39  ILATPDEVGMPFFTPFIETEKDILKEAEDELRKTKNSDHIASVSLNRGMPSTSDINVLRK 98

Query: 61  -------------------------GARAFEEHLDKVEEDQEEDDIEDLNLGSSNPKVLG 120
                                    GARAFEEHLDKVEEDQEEDD+EDLNL SSN  VLG
Sbjct: 99  MVEKIEISQQRMETGVEATKRHEFMGARAFEEHLDKVEEDQEEDDVEDLNLDSSNRTVLG 158

Query: 121 KMDNDEDKDGQGLMDESRTQTSRGQDGGQPKMTQSGTQPTTGDKDCLPYKATEETEEEIN 166
           K D+DEDKDG+ LMDESR ++SRG DGGQ K+ +S T PT GDK+   YKA EE +EEIN
Sbjct: 159 KRDDDEDKDGKWLMDESRGESSRGHDGGQCKVAKSETPPTAGDKESSQYKAMEEIDEEIN 218

[Close]

BLAST of IVF0012003 vs. TAIR 10
Match: AT1G56310.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 107.8 bits (268), Expect = 2.0e-23
Identity = 88/298 (29.53%), Postives = 129/298 (43.29%), Query Frame = 0


Query: 114 TQPTTGDKDCLPYKATEETEEEINRLIRSINESVIYDEMKKKEDNREPSHCRLFCLRVIS 173
           ++PT+ +  CL  K   +        + ++  S+ YDE             R+F +R+ S
Sbjct: 114 SEPTSEEDICLARKLAAQF------FLATVGGSLTYDEKVMVHT------LRVFDVRLTS 173

Query: 174 SLPVVARCS-WLRVLFVVARKQVRCFIVAL--SRGYTAAVDVLEHFSIHQSGQSLLYSML 233
               ++    W R  F      +  +I  L  S+ +  AV +LEHFS    G++ L  M+
Sbjct: 174 IDEALSISEVWQRYGFACGNAFLEQYISDLIKSKSFMTAVTLLEHFSFRFPGETFLQQMV 233

Query: 234 QNNEFKAAEKWATFMGNPMLHLLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKRER 293
           ++  F+AAE+WATFMG P L +LVQ+  +RN LK AY +I KN LQ +FP++Y KCK   
Sbjct: 234 EDKNFQAAERWATFMGRPSLCILVQEYGSRNMLKQAYNIINKNYLQHDFPELYHKCKESA 293

Query: 294 --------------------------------KGSYGQK--------------------- 353
                                           +  Y +K                     
Sbjct: 294 LKVLAEKACWDVAEIKTKGDRQLLKYLVYLAVEAGYLEKVDELCDRYSLQGLPKAREAEV 353

The following BLAST results are available for this feature:

BLAST of IVF0012003 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0012003 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BPW6	2.8e-81	100.00	Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold264G00...	[more]
A0A1S3BPE9	6.6e-54	59.33	uncharacterized protein LOC103492118 OS=Cucumis melo OX=3656 GN=LOC103492118 PE=...	[more]
A0A5D3CG08	6.6e-54	59.33	Exonuclease mut-7-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A5A7TZZ0	8.6e-54	74.84	Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G00...	[more]
A0A0A0LWB0	7.6e-50	56.46	3'-5' exonuclease domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G...	[more]

BLAST of IVF0012003 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK01098.1	1.09e-103	100.00	protein Ycf2-like [Cucumis melo var. makuwa]	[more]
KAA0048518.1	5.38e-64	74.84	protein Ycf2-like [Cucumis melo var. makuwa] >TYK28309.1 protein Ycf2-like [Cucu...	[more]
KAA0050943.1	2.50e-62	59.72	exonuclease mut-7-like protein isoform X1 [Cucumis melo var. makuwa] >TYK10290.1...	[more]
XP_008450552.1	7.17e-62	59.72	PREDICTED: uncharacterized protein LOC103492118 [Cucumis melo] >XP_008450553.1 P...	[more]
KAA0039580.1	1.33e-58	56.94	protein Ycf2-like [Cucumis melo var. makuwa] >TYK01720.1 protein Ycf2-like [Cucu...	[more]

BLAST of IVF0012003 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G56310.1	2.0e-23	29.53	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 373..400
None	No IPR available	COILS	Coil	Coil	coord: 17..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..119
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..124
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..91
None	No IPR available	PANTHER	PTHR13620	3-5 EXONUCLEASE	coord: 200..288
None	No IPR available	PANTHER	PTHR13620:SF91	SUBFAMILY NOT NAMED	coord: 200..288

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0012003.1	IVF0012003.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044260	cellular macromolecule metabolic process
biological_process	GO:0090304	nucleic acid metabolic process
cellular_component	GO:0016020	membrane
molecular_function	GO:0004518	nuclease activity
molecular_function	GO:0016740	transferase activity