IVF0011991 (gene) Melon (IVF77) v1

Overview
NameIVF0011991
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr04: 20393468 .. 20393825 (+)
RNA-Seq ExpressionIVF0011991
SyntenyIVF0011991
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAGTGCAAGGAATCATCAATGGCGGGGTAGAAGGGAAGCAAATGGAGCGAAGGACGGCGACGAATATGAAGGGAGCATTAAATCCAAATAGGAAAATCAAGTAAAATTATACAAAGCGTCGAATCTCTTTTCTTTCCGGTCCCCTTCACGGACTCCCAACCGTCCGATTCATTAACGTCTTTTATTGGACGGAGGAGAATGCGGATACTGCGAGAGAGAAGGCAGGCTCACCGGCTAGGCAGTGTAGATGATAGTTTCTATGTGCCACGTGGATGCCAGCGTGGATTATTCGGCCGGCGTACACGGATGAAGGAATATTCCTGGAGTCACGTGGCGCTTGTGTATGTTGCATAG

mRNA sequence

ATGACAGTGCAAGGAATCATCAATGGCGGGGTAGAAGGGAAGCAAATGGAGCGAAGGACGGCGACGAATATGAAGGGAGCATTAAATCCAAATAGGAAAATCAAGAGAATGCGGATACTGCGAGAGAGAAGGCAGGCTCACCGGCTAGGCAGTGTAGATGATAGTTTCTATGTGCCACGTGGATGCCAGCGTGGATTATTCGGCCGGCGTACACGGATGAAGGAATATTCCTGGAGTCACGTGGCGCTTGTGTATGTTGCATAG

Coding sequence (CDS)

ATGACAGTGCAAGGAATCATCAATGGCGGGGTAGAAGGGAAGCAAATGGAGCGAAGGACGGCGACGAATATGAAGGGAGCATTAAATCCAAATAGGAAAATCAAGAGAATGCGGATACTGCGAGAGAGAAGGCAGGCTCACCGGCTAGGCAGTGTAGATGATAGTTTCTATGTGCCACGTGGATGCCAGCGTGGATTATTCGGCCGGCGTACACGGATGAAGGAATATTCCTGGAGTCACGTGGCGCTTGTGTATGTTGCATAG

Protein sequence

MTVQGIINGGVEGKQMERRTATNMKGALNPNRKIKRMRILRERRQAHRLGSVDDSFYVPRGCQRGLFGRRTRMKEYSWSHVALVYVA
Homology
[Close]
BLAST of IVF0011991 vs. ExPASy TrEMBL
Match: A0A0A0L981 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G638000 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.7e-36
Identity = 80/87 (91.95%), Postives = 81/87 (93.10%), Query Frame = 0 

Query: 1  MTVQGIINGGVEGKQMERRTATNMKGALNPNRKIKRMRILRERRQAHRLGSVDDSFYVPR 60
          MTVQGIINGG EGKQMERRTATNMKGALNPNRKIKRMRILRERRQA RLG+VDDS YVPR
Sbjct: 1  MTVQGIINGGEEGKQMERRTATNMKGALNPNRKIKRMRILRERRQAQRLGNVDDSLYVPR 60

Query: 61 GCQRGLFGRRTRMKEYSWSHVALVYVA 88
          GCQRGLFGR TRMKEYSWSHVA  YVA
Sbjct: 61 GCQRGLFGRLTRMKEYSWSHVARGYVA 87

[Close]
BLAST of IVF0011991 vs. NCBI nr
Match: KAE8650868.1 (hypothetical protein Csa_002560, partial [Cucumis sativus])

HSP 1 Score: 92.4 bits (228), Expect = 1.55e-22
Identity = 43/48 (89.58%), Postives = 45/48 (93.75%), Query Frame = 0 

Query: 35 KRMRILRERRQAHRLGSVDDSFYVPRGCQRGLFGRRTRMKEYSWSHVA 82
          +RMRILRERRQA RLG+VDDS YVPRGCQRGLFGR TRMKEYSWSHVA
Sbjct: 16 RRMRILRERRQAQRLGNVDDSLYVPRGCQRGLFGRLTRMKEYSWSHVA 63

The following BLAST results are available for this feature:
BLAST of IVF0011991 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0011991 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L9811.7e-3691.95Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G638000 PE=4 SV=1[more]
BLAST of IVF0011991 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8650868.11.55e-2289.58hypothetical protein Csa_002560, partial [Cucumis sativus][more]
BLAST of IVF0011991 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0011991.1IVF0011991.1mRNA