IVF0011990 (gene) Melon (IVF77) v1

Overview


Name	IVF0011990
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Transcription termination factor MTEF1
Location	tig00000060: 395031 .. 396125 (-)
RNA-Seq Expression	IVF0011990
Synteny	IVF0011990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATAACTTGTTTCGTAGAATCATTCTACTTAGATCTCCATCGTCAGTCTGTACTCACGGATTTTCCGAAAGTCCGTTGAAGTCTCTCAGATTCTTATCGACCTCTTCTGAGATTGTATCATCTCCGAAATCTGCTTCGTTGGCTTCTAATGTTGTTCAGCTCAAGAACAATCGGAAGACTGTAATTGCGTTTTTTGAGAATCATGGATTCTCTGAATCACAAATTTCTGATCTTGTTAAGAAGGTCCCTCTAATTCTTTCTGCGAACACCGAGACCCTATTTCCTGTATTGTTGTTTTTTAAATCTAAAGGTCTTTCTTCCCCAGAGATAACCAAATTCGTATGTTCTGCTCCTCAAGTTTTAAAACGAAGTTTAAACCAAGAAATTATTCCAGTCTTTGATTACATTCAAGCCGTGCTTGGAACAGTCGAGAAGACTGTCGCTACCATAAAACGCTTTGCGGGTATTCTCGGTTGGAATCTTCGAATTTCAGTTGGTCCCAATATTGAAATTCTGAGACAATTTGGAGTGCCGGATTCAAATATTTCATTTTATCTTCAGCGGCAGCCTAAAATGTTCTCGATAAGTTCCATCCAATTCAAGGAGGTTGTAGAGAGAGTTATGGAAATGGGATTCAACCCTCAACAATTGCAGTTTGTTGTTGCTGTTTTTGCTCTTCGATCAATGACCAAATCTTCATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGTTCAGTTTAGCTTTTAGAAGGCATCCATTGTGTATGACGTTTTCTGAGGATAAGATTAATGGTGTAATGGATTTTTTTGTCAACGAAATTGGATGGGAATCATCTTTCGTTGCTAGAAGACCAGTTTTAATTTCACTTAGTTTGAAGAAGAGGCTATTTCCTAGAGGCTATGTTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAAAAACACAAGAAACTTTATTTGTTGTTTGAGTATCCCGAAATCCGTTTCATAGAAAAATTCATCAACCCTCATAAGGAGCAGATTCCTGGATTGTTGGAGTTGTATAAACAGAAATTAATGGATTCTAGAAGATGA

mRNA sequence

ATGTATAACTTGTTTCGTAGAATCATTCTACTTAGATCTCCATCGTCAGTCTGTACTCACGGATTTTCCGAAAGTCCGTTGAAGTCTCTCAGATTCTTATCGACCTCTTCTGAGATTGTATCATCTCCGAAATCTGCTTCGTTGGCTTCTAATGTTGTTCAGCTCAAGAACAATCGGAAGACTGTAATTGCGTTTTTTGAGAATCATGGATTCTCTGAATCACAAATTTCTGATCTTGTTAAGAAGGTCCCTCTAATTCTTTCTGCGAACACCGAGACCCTATTTCCTGTATTGTTGTTTTTTAAATCTAAAGGTCTTTCTTCCCCAGAGATAACCAAATTCGTATGTTCTGCTCCTCAAGTTTTAAAACGAAGTTTAAACCAAGAAATTATTCCAGTCTTTGATTACATTCAAGCCGTGCTTGGAACAGTCGAGAAGACTGTCGCTACCATAAAACGCTTTGCGGGTATTCTCGGTTGGAATCTTCGAATTTCAGTTGGTCCCAATATTGAAATTCTGAGACAATTTGGAGTGCCGGATTCAAATATTTCATTTTATCTTCAGCGGCAGCCTAAAATGTTCTCGATAAGTTCCATCCAATTCAAGGAGGTTGTAGAGAGAGTTATGGAAATGGGATTCAACCCTCAACAATTGCAGTTTGTTGTTGCTGTTTTTGCTCTTCGATCAATGACCAAATCTTCATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGTTCAGTTTAGCTTTTAGAAGGCATCCATTGTGTATGACGTTTTCTGAGGATAAGATTAATGGTGTAATGGATTTTTTTGTCAACGAAATTGGATGGGAATCATCTTTCGTTGCTAGAAGACCAGTTTTAATTTCACTTAGTTTGAAGAAGAGGCTATTTCCTAGAGGCTATGTTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAAAAACACAAGAAACTTTATTTGTTGTTTGAGTATCCCGAAATCCGTTTCATAGAAAAATTCATCAACCCTCATAAGGAGCAGATTCCTGGATTGTTGGAGTTGTATAAACAGAAATTAATGGATTCTAGAAGATGA

Coding sequence (CDS)

ATGTATAACTTGTTTCGTAGAATCATTCTACTTAGATCTCCATCGTCAGTCTGTACTCACGGATTTTCCGAAAGTCCGTTGAAGTCTCTCAGATTCTTATCGACCTCTTCTGAGATTGTATCATCTCCGAAATCTGCTTCGTTGGCTTCTAATGTTGTTCAGCTCAAGAACAATCGGAAGACTGTAATTGCGTTTTTTGAGAATCATGGATTCTCTGAATCACAAATTTCTGATCTTGTTAAGAAGGTCCCTCTAATTCTTTCTGCGAACACCGAGACCCTATTTCCTGTATTGTTGTTTTTTAAATCTAAAGGTCTTTCTTCCCCAGAGATAACCAAATTCGTATGTTCTGCTCCTCAAGTTTTAAAACGAAGTTTAAACCAAGAAATTATTCCAGTCTTTGATTACATTCAAGCCGTGCTTGGAACAGTCGAGAAGACTGTCGCTACCATAAAACGCTTTGCGGGTATTCTCGGTTGGAATCTTCGAATTTCAGTTGGTCCCAATATTGAAATTCTGAGACAATTTGGAGTGCCGGATTCAAATATTTCATTTTATCTTCAGCGGCAGCCTAAAATGTTCTCGATAAGTTCCATCCAATTCAAGGAGGTTGTAGAGAGAGTTATGGAAATGGGATTCAACCCTCAACAATTGCAGTTTGTTGTTGCTGTTTTTGCTCTTCGATCAATGACCAAATCTTCATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGTTCAGTTTAGCTTTTAGAAGGCATCCATTGTGTATGACGTTTTCTGAGGATAAGATTAATGGTGTAATGGATTTTTTTGTCAACGAAATTGGATGGGAATCATCTTTCGTTGCTAGAAGACCAGTTTTAATTTCACTTAGTTTGAAGAAGAGGCTATTTCCTAGAGGCTATGTTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAAAAACACAAGAAACTTTATTTGTTGTTTGAGTATCCCGAAATCCGTTTCATAGAAAAATTCATCAACCCTCATAAGGAGCAGATTCCTGGATTGTTGGAGTTGTATAAACAGAAATTAATGGATTCTAGAAGATGA

Protein sequence

MYNLFRRIILLRSPSSVCTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRKTVIAFFENHGFSESQISDLVKKVPLILSANTETLFPVLLFFKSKGLSSPEITKFVCSAPQVLKRSLNQEIIPVFDYIQAVLGTVEKTVATIKRFAGILGWNLRISVGPNIEILRQFGVPDSNISFYLQRQPKMFSISSIQFKEVVERVMEMGFNPQQLQFVVAVFALRSMTKSSWDKKVEVYRKWGLSEEEFSLAFRRHPLCMTFSEDKINGVMDFFVNEIGWESSFVARRPVLISLSLKKRLFPRGYVYQVLLSKGLIKKHKKLYLLFEYPEIRFIEKFINPHKEQIPGLLELYKQKLMDSRR

Homology

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BLAST of IVF0011990 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.2e-06
Identity = 45/177 (25.42%), Postives = 85/177 (48.02%), Query Frame = 0


Query: 144 VEKTVATIKRFAGILGWNLRISVGPNIEILRQFGVPDSNISFYLQRQPKMFSIS-SIQFK 203
           +E+     ++FA    ++L   + P +E L   G+P S+I   L ++P++  IS +   K
Sbjct: 210 LEQIKTITRKFAAFPYYSLDGKIKPVVEFLLDLGIPKSDIPTILCKRPQICGISLTDNLK 269

Query: 204 EVVERVMEMGFNPQQLQFVVAVF-ALRSMTKSSWDKKVEVYRKWGLSEEEFSLAFRRHPL 263
             +  +  +G +  Q   +++ F A+ + ++      VE   + GL+EE+      R P 
Sbjct: 270 PTMAFLETLGIDKNQWAKIISRFPAILTYSRQKLTSTVEFLSQTGLTEEQIGRILTRCPN 329

Query: 264 CMTFS-EDKINGVMDFFVNEIGWESSFVARRPVLISLSLKKRLFPRGYVYQVLLSKG 318
            M++S EDK+   M++F +     +  + R P    LS++  L P   V +  L KG
Sbjct: 330 IMSYSVEDKLRPTMEYFRSLNVDVAVLLHRCPQTFGLSIESNLKP---VTEFFLEKG 383

[Close]

BLAST of IVF0011990 vs. ExPASy Swiss-Prot
Match: Q9ZT96 (Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF4 PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 4.8e-05
Identity = 50/262 (19.08%), Postives = 118/262 (45.04%), Query Frame = 0


Query: 62  VIAFFENHGFSESQISDLVKKVPLILSANTE-TLFPVLLFFKSKGLSSPEITKFVCSAPQ 121
           V+ + +      S +  ++++ P +L    E T+   + +    G++  EI   +   P+
Sbjct: 218 VVKYLQGLDIKPSDVPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGILTRYPE 277

Query: 122 VLKRSLNQEIIPVFDYIQAVLGTVEKTVA-TIKRFAGILGWNLRISVGPNIEILRQFGVP 181
           +L   + + I P+ +Y++ VLG      A  I++   ILG+ L  +V PN++IL+ F V 
Sbjct: 278 ILGMRVARIIKPLVEYLE-VLGIPRLAAARLIEKRPHILGFELDDTVKPNVQILQDFNVR 337

Query: 182 DSNISFYLQRQPKMFSISSIQFKEVVERVM--EMGFNPQQL-QFVVAVFALRSMTKSSWD 241
           ++++   + + P++  I      +   +++   +  NP+ L   +  +    S+++S   
Sbjct: 338 ETSLPSIIAQYPEIIGIDLKPKLDTQRKLLCSAIHLNPEDLGSLIERMPQFVSLSESPML 397

Query: 242 KKVEVYRKWGLSEEEFSLAFRRHPLCMTFSEDKINGVMDFFVNEIGWESSFVARRPVLIS 301
           K ++   K G S ++        P  +  +   +    ++F  E+      +   P   +
Sbjct: 398 KHIDFLTKCGFSIDQTREMVIGCPQVLALNLGIMKLSFEYFQKEMKRPLQDLVDFPAFFT 457

Query: 302 LSLKKRLFPRGYVYQVLLSKGL 319
             L+  + PR   ++ ++ KG+
Sbjct: 458 YGLESTVKPR---HKKIIKKGI 475

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BLAST of IVF0011990 vs. ExPASy TrEMBL
Match: A0A5D3CW97 (Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00680 PE=3 SV=1)

HSP 1 Score: 709.5 bits (1830), Expect = 7.1e-201
Identity = 364/364 (100.00%), Postives = 364/364 (100.00%), Query Frame = 0


Query: 1   MYNLFRRIILLRSPSSVCTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60
           MYNLFRRIILLRSPSSVCTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK
Sbjct: 1   MYNLFRRIILLRSPSSVCTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60

Query: 61  TVIAFFENHGFSESQISDLVKKVPLILSANTETLFPVLLFFKSKGLSSPEITKFVCSAPQ 120
           TVIAFFENHGFSESQISDLVKKVPLILSANTETLFPVLLFFKSKGLSSPEITKFVCSAPQ
Sbjct: 61  TVIAFFENHGFSESQISDLVKKVPLILSANTETLFPVLLFFKSKGLSSPEITKFVCSAPQ 120

Query: 121 VLKRSLNQEIIPVFDYIQAVLGTVEKTVATIKRFAGILGWNLRISVGPNIEILRQFGVPD 180
           VLKRSLNQEIIPVFDYIQAVLGTVEKTVATIKRFAGILGWNLRISVGPNIEILRQFGVPD
Sbjct: 121 VLKRSLNQEIIPVFDYIQAVLGTVEKTVATIKRFAGILGWNLRISVGPNIEILRQFGVPD 180

Query: 181 SNISFYLQRQPKMFSISSIQFKEVVERVMEMGFNPQQLQFVVAVFALRSMTKSSWDKKVE 240
           SNISFYLQRQPKMFSISSIQFKEVVERVMEMGFNPQQLQFVVAVFALRSMTKSSWDKKVE
Sbjct: 181 SNISFYLQRQPKMFSISSIQFKEVVERVMEMGFNPQQLQFVVAVFALRSMTKSSWDKKVE 240

Query: 241 VYRKWGLSEEEFSLAFRRHPLCMTFSEDKINGVMDFFVNEIGWESSFVARRPVLISLSLK 300
           VYRKWGLSEEEFSLAFRRHPLCMTFSEDKINGVMDFFVNEIGWESSFVARRPVLISLSLK
Sbjct: 241 VYRKWGLSEEEFSLAFRRHPLCMTFSEDKINGVMDFFVNEIGWESSFVARRPVLISLSLK 300

Query: 301 KRLFPRGYVYQVLLSKGLIKKHKKLYLLFEYPEIRFIEKFINPHKEQIPGLLELYKQKLM 360
           KRLFPRGYVYQVLLSKGLIKKHKKLYLLFEYPEIRFIEKFINPHKEQIPGLLELYKQKLM
Sbjct: 301 KRLFPRGYVYQVLLSKGLIKKHKKLYLLFEYPEIRFIEKFINPHKEQIPGLLELYKQKLM 360

Query: 361 DSRR 365
           DSRR
Sbjct: 361 DSRR 364

[Close]

BLAST of IVF0011990 vs. ExPASy TrEMBL
Match: A0A1S3AXC4 (uncharacterized protein LOC103483817 OS=Cucumis melo OX=3656 GN=LOC103483817 PE=3 SV=1)

HSP 1 Score: 709.5 bits (1830), Expect = 7.1e-201
Identity = 364/364 (100.00%), Postives = 364/364 (100.00%), Query Frame = 0


Query: 1   MYNLFRRIILLRSPSSVCTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60
           MYNLFRRIILLRSPSSVCTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK
Sbjct: 1   MYNLFRRIILLRSPSSVCTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60

Query: 61  TVIAFFENHGFSESQISDLVKKVPLILSANTETLFPVLLFFKSKGLSSPEITKFVCSAPQ 120
           TVIAFFENHGFSESQISDLVKKVPLILSANTETLFPVLLFFKSKGLSSPEITKFVCSAPQ
Sbjct: 61  TVIAFFENHGFSESQISDLVKKVPLILSANTETLFPVLLFFKSKGLSSPEITKFVCSAPQ 120

Query: 121 VLKRSLNQEIIPVFDYIQAVLGTVEKTVATIKRFAGILGWNLRISVGPNIEILRQFGVPD 180
           VLKRSLNQEIIPVFDYIQAVLGTVEKTVATIKRFAGILGWNLRISVGPNIEILRQFGVPD
Sbjct: 121 VLKRSLNQEIIPVFDYIQAVLGTVEKTVATIKRFAGILGWNLRISVGPNIEILRQFGVPD 180

Query: 181 SNISFYLQRQPKMFSISSIQFKEVVERVMEMGFNPQQLQFVVAVFALRSMTKSSWDKKVE 240
           SNISFYLQRQPKMFSISSIQFKEVVERVMEMGFNPQQLQFVVAVFALRSMTKSSWDKKVE
Sbjct: 181 SNISFYLQRQPKMFSISSIQFKEVVERVMEMGFNPQQLQFVVAVFALRSMTKSSWDKKVE 240

Query: 241 VYRKWGLSEEEFSLAFRRHPLCMTFSEDKINGVMDFFVNEIGWESSFVARRPVLISLSLK 300
           VYRKWGLSEEEFSLAFRRHPLCMTFSEDKINGVMDFFVNEIGWESSFVARRPVLISLSLK
Sbjct: 241 VYRKWGLSEEEFSLAFRRHPLCMTFSEDKINGVMDFFVNEIGWESSFVARRPVLISLSLK 300

Query: 301 KRLFPRGYVYQVLLSKGLIKKHKKLYLLFEYPEIRFIEKFINPHKEQIPGLLELYKQKLM 360
           KRLFPRGYVYQVLLSKGLIKKHKKLYLLFEYPEIRFIEKFINPHKEQIPGLLELYKQKLM
Sbjct: 301 KRLFPRGYVYQVLLSKGLIKKHKKLYLLFEYPEIRFIEKFINPHKEQIPGLLELYKQKLM 360

Query: 361 DSRR 365
           DSRR
Sbjct: 361 DSRR 364

[Close]

BLAST of IVF0011990 vs. ExPASy TrEMBL
Match: A0A5D3D105 (Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00640 PE=3 SV=1)

HSP 1 Score: 579.3 bits (1492), Expect = 1.1e-161
Identity = 298/364 (81.87%), Postives = 323/364 (88.74%), Query Frame = 0


Query: 1   MYNLFRRIILLRSPSSVCTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60
           MYNLFRRIILLRSP SV +HGFSESPLKSLRFLSTSSEI SSPKSASLASN+VQLKN RK
Sbjct: 1   MYNLFRRIILLRSPLSVFSHGFSESPLKSLRFLSTSSEIASSPKSASLASNIVQLKNKRK 60

Query: 61  TVIAFFENHGFSESQISDLVKKVPLILSANTETLFPVLLFFKSKGLSSPEITKFVCSAPQ 120
            V+AFF NHGFSESQISDLVKKVPLILSAN ETLFP+LLFF+SKGLSSP ITK VCSAPQ
Sbjct: 61  AVLAFFGNHGFSESQISDLVKKVPLILSANPETLFPILLFFQSKGLSSPTITKLVCSAPQ 120

Query: 121 VLKRSLNQEIIPVFDYIQAVLGTVEKTVATIKRFAGILGWNLRISVGPNIEILRQFGVPD 180
           VL RSLNQEIIPVFDY+QA+LGTVEKTVATIKRF  ILGWN RISVGPNIE+L+Q GVPD
Sbjct: 121 VLNRSLNQEIIPVFDYVQAMLGTVEKTVATIKRFPFILGWNPRISVGPNIELLKQIGVPD 180

Query: 181 SNISFYLQRQPKMFSISSIQFKEVVERVMEMGFNPQQLQFVVAVFALRSMTKSSWDKKVE 240
           SNI  YLQ QP++F ISSI+FKE+VERV EMGFNPQ+LQF+VAVFALRSMTKS+WDKKVE
Sbjct: 181 SNILKYLQYQPRVFLISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRSMTKSTWDKKVE 240

Query: 241 VYRKWGLSEEEFSLAFRRHPLCMTFSEDKINGVMDFFVNEIGWESSFVARRPVLISLSLK 300
           VYRKWGLSEEE  LAFR+HP CM  SED IN  MDFFVN++  ESS VARRP L + SLK
Sbjct: 241 VYRKWGLSEEEIRLAFRKHPGCMVLSEDNINDTMDFFVNKMECESSSVARRPTLFAFSLK 300

Query: 301 KRLFPRGYVYQVLLSKGLIKKHKKLYLLFEYPEIRFIEKFINPHKEQIPGLLELYKQKLM 360
           KR+ PRG+VYQVLLSKGLIKKHK  + LFEYPE RFIEK IN  KE+IPGLLELY+QKLM
Sbjct: 301 KRILPRGFVYQVLLSKGLIKKHKNNFSLFEYPEKRFIEKIINRRKEKIPGLLELYEQKLM 360

Query: 361 DSRR 365
           DSRR
Sbjct: 361 DSRR 364

[Close]

BLAST of IVF0011990 vs. ExPASy TrEMBL
Match: A0A1S3AWZ8 (transcription termination factor MTEF1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103483815 PE=3 SV=1)

HSP 1 Score: 579.3 bits (1492), Expect = 1.1e-161
Identity = 298/364 (81.87%), Postives = 323/364 (88.74%), Query Frame = 0


Query: 1   MYNLFRRIILLRSPSSVCTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60
           MYNLFRRIILLRSP SV +HGFSESPLKSLRFLSTSSEI SSPKSASLASN+VQLKN RK
Sbjct: 1   MYNLFRRIILLRSPLSVFSHGFSESPLKSLRFLSTSSEIASSPKSASLASNIVQLKNKRK 60

Query: 61  TVIAFFENHGFSESQISDLVKKVPLILSANTETLFPVLLFFKSKGLSSPEITKFVCSAPQ 120
            V+AFF NHGFSESQISDLVKKVPLILSAN ETLFP+LLFF+SKGLSSP ITK VCSAPQ
Sbjct: 61  AVLAFFGNHGFSESQISDLVKKVPLILSANPETLFPILLFFQSKGLSSPTITKLVCSAPQ 120

Query: 121 VLKRSLNQEIIPVFDYIQAVLGTVEKTVATIKRFAGILGWNLRISVGPNIEILRQFGVPD 180
           VL RSLNQEIIPVFDY+QA+LGTVEKTVATIKRF  ILGWN RISVGPNIE+L+Q GVPD
Sbjct: 121 VLNRSLNQEIIPVFDYVQAMLGTVEKTVATIKRFPFILGWNPRISVGPNIELLKQIGVPD 180

Query: 181 SNISFYLQRQPKMFSISSIQFKEVVERVMEMGFNPQQLQFVVAVFALRSMTKSSWDKKVE 240
           SNI  YLQ QP++F ISSI+FKE+VERV EMGFNPQ+LQF+VAVFALRSMTKS+WDKKVE
Sbjct: 181 SNILKYLQYQPRVFLISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRSMTKSTWDKKVE 240

Query: 241 VYRKWGLSEEEFSLAFRRHPLCMTFSEDKINGVMDFFVNEIGWESSFVARRPVLISLSLK 300
           VYRKWGLSEEE  LAFR+HP CM  SED IN  MDFFVN++  ESS VARRP L + SLK
Sbjct: 241 VYRKWGLSEEEIRLAFRKHPGCMVLSEDNINDTMDFFVNKMECESSSVARRPTLFAFSLK 300

Query: 301 KRLFPRGYVYQVLLSKGLIKKHKKLYLLFEYPEIRFIEKFINPHKEQIPGLLELYKQKLM 360
           KR+ PRG+VYQVLLSKGLIKKHK  + LFEYPE RFIEK IN  KE+IPGLLELY+QKLM
Sbjct: 301 KRILPRGFVYQVLLSKGLIKKHKNNFSLFEYPEKRFIEKIINRRKEKIPGLLELYEQKLM 360

Query: 361 DSRR 365
           DSRR
Sbjct: 361 DSRR 364

[Close]

BLAST of IVF0011990 vs. ExPASy TrEMBL
Match: A0A1S4DSR4 (uncharacterized protein LOC103483819 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103483819 PE=3 SV=1)

HSP 1 Score: 530.8 bits (1366), Expect = 4.5e-147
Identity = 280/365 (76.71%), Postives = 307/365 (84.11%), Query Frame = 0


Query: 1   MYNLFRRIILLRSPSSVCTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60
           M NLFRRI+LLRSPSSV +HGFSE PLKSLRFLSTSSEIVSSPKSASLASNVVQ+KNNRK
Sbjct: 1   MSNLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEIVSSPKSASLASNVVQIKNNRK 60

Query: 61  TVIAFFENHGFSESQISDLVKKVPLILSANTE-TLFPVLLFFKSKGLSSPEITKFVCSAP 120
              +FFENHGFSESQISD+ KK P ILSAN E  L P LLFF+SKGLSSPEI K V S P
Sbjct: 61  AAFSFFENHGFSESQISDIDKKFPQILSANPEKILLPKLLFFRSKGLSSPEIAKIVYSFP 120

Query: 121 QVLKRSLNQEIIPVFDYIQAVLGTVEKTVATIKRFAGILGWNLRISVGPNIEILRQFGVP 180
            VL  SLN  IIP FDYIQAVLG+ EKT+  IK FAGIL  +LRISVGPNIEIL+Q GVP
Sbjct: 121 YVLSGSLNNRIIPAFDYIQAVLGSEEKTLTLIKYFAGILTQDLRISVGPNIEILKQIGVP 180

Query: 181 DSNISFYLQRQPKMFSISSIQFKEVVERVMEMGFNPQQLQFVVAVFALRSMTKSSWDKKV 240
           DSNI  YLQ +P++F  + I+FKE V+RV EMGFNPQQLQFVVAVF LRS+TKS+WDKKV
Sbjct: 181 DSNIFKYLQYRPRVFLTNPIRFKETVDRVTEMGFNPQQLQFVVAVFILRSLTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEFSLAFRRHPLCMTFSEDKINGVMDFFVNEIGWESSFVARRPVLISLSL 300
           EVYRKWGLSEEE  LAF+RHP CM  SEDKINGVMDFFVN+IG ESSFVA RPVLISLSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGVMDFFVNKIGCESSFVASRPVLISLSL 300

Query: 301 KKRLFPRGYVYQVLLSKGLIKKHKKLYLLFEYPEIRFIEKFINPHKEQIPGLLELYKQKL 360
           KKR+FPRGYVYQVLL+KGLIKKH  + +  +  E  FIEK I+PHKEQIPGLLE Y+QKL
Sbjct: 301 KKRIFPRGYVYQVLLAKGLIKKHADITMFVKCSEKHFIEKIIDPHKEQIPGLLESYEQKL 360

Query: 361 MDSRR 365
           MDSRR
Sbjct: 361 MDSRR 365

[Close]

BLAST of IVF0011990 vs. NCBI nr
Match: XP_008438831.1 (PREDICTED: uncharacterized protein LOC103483817 [Cucumis melo] >KAA0049464.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK16143.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa])

HSP 1 Score: 708 bits (1828), Expect = 4.62e-257
Identity = 364/364 (100.00%), Postives = 364/364 (100.00%), Query Frame = 0


Query: 1   MYNLFRRIILLRSPSSVCTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60
           MYNLFRRIILLRSPSSVCTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK
Sbjct: 1   MYNLFRRIILLRSPSSVCTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60

Query: 61  TVIAFFENHGFSESQISDLVKKVPLILSANTETLFPVLLFFKSKGLSSPEITKFVCSAPQ 120
           TVIAFFENHGFSESQISDLVKKVPLILSANTETLFPVLLFFKSKGLSSPEITKFVCSAPQ
Sbjct: 61  TVIAFFENHGFSESQISDLVKKVPLILSANTETLFPVLLFFKSKGLSSPEITKFVCSAPQ 120

Query: 121 VLKRSLNQEIIPVFDYIQAVLGTVEKTVATIKRFAGILGWNLRISVGPNIEILRQFGVPD 180
           VLKRSLNQEIIPVFDYIQAVLGTVEKTVATIKRFAGILGWNLRISVGPNIEILRQFGVPD
Sbjct: 121 VLKRSLNQEIIPVFDYIQAVLGTVEKTVATIKRFAGILGWNLRISVGPNIEILRQFGVPD 180

Query: 181 SNISFYLQRQPKMFSISSIQFKEVVERVMEMGFNPQQLQFVVAVFALRSMTKSSWDKKVE 240
           SNISFYLQRQPKMFSISSIQFKEVVERVMEMGFNPQQLQFVVAVFALRSMTKSSWDKKVE
Sbjct: 181 SNISFYLQRQPKMFSISSIQFKEVVERVMEMGFNPQQLQFVVAVFALRSMTKSSWDKKVE 240

Query: 241 VYRKWGLSEEEFSLAFRRHPLCMTFSEDKINGVMDFFVNEIGWESSFVARRPVLISLSLK 300
           VYRKWGLSEEEFSLAFRRHPLCMTFSEDKINGVMDFFVNEIGWESSFVARRPVLISLSLK
Sbjct: 241 VYRKWGLSEEEFSLAFRRHPLCMTFSEDKINGVMDFFVNEIGWESSFVARRPVLISLSLK 300

Query: 301 KRLFPRGYVYQVLLSKGLIKKHKKLYLLFEYPEIRFIEKFINPHKEQIPGLLELYKQKLM 360
           KRLFPRGYVYQVLLSKGLIKKHKKLYLLFEYPEIRFIEKFINPHKEQIPGLLELYKQKLM
Sbjct: 301 KRLFPRGYVYQVLLSKGLIKKHKKLYLLFEYPEIRFIEKFINPHKEQIPGLLELYKQKLM 360

Query: 361 DSRR 364
           DSRR
Sbjct: 361 DSRR 364

[Close]

BLAST of IVF0011990 vs. NCBI nr
Match: XP_011652761.2 (transcription termination factor MTERF6, chloroplastic/mitochondrial-like [Cucumis sativus])

HSP 1 Score: 614 bits (1584), Expect = 6.99e-220
Identity = 312/364 (85.71%), Postives = 338/364 (92.86%), Query Frame = 0


Query: 1   MYNLFRRIILLRSPSSVCTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60
           MYNLFRRIILLRSPSSV +HGFSE PLKSLR+LSTSSEIVSSPKSASL SNVVQL NNRK
Sbjct: 1   MYNLFRRIILLRSPSSVFSHGFSECPLKSLRYLSTSSEIVSSPKSASLPSNVVQLMNNRK 60

Query: 61  TVIAFFENHGFSESQISDLVKKVPLILSANTETLFPVLLFFKSKGLSSPEITKFVCSAPQ 120
            +IAFFENHGFSESQISD VKKVPL+LS N ETLFP+LLFF+SKGLSS  ITK VCS PQ
Sbjct: 61  AIIAFFENHGFSESQISDFVKKVPLMLSENPETLFPILLFFQSKGLSSSAITKLVCSVPQ 120

Query: 121 VLKRSLNQEIIPVFDYIQAVLGTVEKTVATIKRFAGILGWNLRISVGPNIEILRQFGVPD 180
           VLKRSLNQEIIPVFDYIQAVLGTVEKTV TIKRF  ILGWNLRISVGPNIEIL+Q GVPD
Sbjct: 121 VLKRSLNQEIIPVFDYIQAVLGTVEKTVTTIKRFPRILGWNLRISVGPNIEILKQLGVPD 180

Query: 181 SNISFYLQRQPKMFSISSIQFKEVVERVMEMGFNPQQLQFVVAVFALRSMTKSSWDKKVE 240
           SNIS YLQRQPKMF  SSIQFKE++ERVMEMGF+PQ+LQF+VAVFALRS+TKSSWDKK+E
Sbjct: 181 SNISTYLQRQPKMFFTSSIQFKEIIERVMEMGFSPQRLQFLVAVFALRSLTKSSWDKKLE 240

Query: 241 VYRKWGLSEEEFSLAFRRHPLCMTFSEDKINGVMDFFVNEIGWESSFVARRPVLISLSLK 300
           VYRKWGLSEE+F +AFRR+P+C+TFSEDK N VMDFFVN+IG +SSFVAR+PVLISLSLK
Sbjct: 241 VYRKWGLSEEDFRIAFRRNPMCITFSEDKTNSVMDFFVNKIGCQSSFVARKPVLISLSLK 300

Query: 301 KRLFPRGYVYQVLLSKGLIKKHKKLYLLFEYPEIRFIEKFINPHKEQIPGLLELYKQKLM 360
           KR+FPRGYVYQVLLSKGLIKKHKK+ LLFE PE RFIEKFINPHKEQIPGLLELY+QKLM
Sbjct: 301 KRIFPRGYVYQVLLSKGLIKKHKKIILLFESPEKRFIEKFINPHKEQIPGLLELYEQKLM 360

Query: 361 DSRR 364
           DSR+
Sbjct: 361 DSRK 364

[Close]

BLAST of IVF0011990 vs. NCBI nr
Match: XP_011651040.2 (transcription termination factor MTERF6, chloroplastic/mitochondrial isoform X2 [Cucumis sativus])

HSP 1 Score: 597 bits (1539), Expect = 5.78e-213
Identity = 307/361 (85.04%), Postives = 329/361 (91.14%), Query Frame = 0


Query: 1   MYNLFRRIILLRSPSSVCTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60
           MYNLFRRIIL  SPSSV THGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK
Sbjct: 1   MYNLFRRIILPGSPSSVFTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60

Query: 61  TVIAFFENHGFSESQISDLVKKVPLILSANTETLFPVLLFFKSKGLSSPEITKFVCSAPQ 120
            +IAFFENHGFSESQISDL+KKVPLILSAN E LFP+LLFFKSKGLSSP ITK VC APQ
Sbjct: 61  AIIAFFENHGFSESQISDLIKKVPLILSANPEILFPILLFFKSKGLSSPAITKLVCFAPQ 120

Query: 121 VLKRSLNQEIIPVFDYIQAVLGTVEKTVATIKRFAGILGWNLRISVGPNIEILRQFGVPD 180
           +LKRSLNQEIIP FDYIQAVLGTVEKTVATIKRF  ILGWNLRISVGPNIEIL+QFGVPD
Sbjct: 121 ILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNLRISVGPNIEILKQFGVPD 180

Query: 181 SNISFYLQRQPKMFSISSIQFKEVVERVMEMGFNPQQLQFVVAVFALRSMTKSSWDKKVE 240
           SNIS YLQRQPK+FS SSI+FKE+VERV EMGFNPQ+LQF+VAV ALRS+TKSSWDKK+E
Sbjct: 181 SNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFNPQRLQFIVAVHALRSLTKSSWDKKLE 240

Query: 241 VYRKWGLSEEEFSLAFRRHPLCMTFSEDKINGVMDFFVNEIGWESSFVARRPVLISLSLK 300
           VYRKWGLSEEEF LAFR++P CM  SEDKIN  MDFF+N++G ESS VARRP L+S SLK
Sbjct: 241 VYRKWGLSEEEFYLAFRKYPWCMALSEDKINDTMDFFINKMGRESSLVARRPSLLSYSLK 300

Query: 301 KRLFPRGYVYQVLLSKGLIKKHKKLYLLFEYPEIRFIEKFINPHKEQIPGLLELYKQKLM 360
           KRLFPRGYVYQVLLSKGLIKK K L LLFE PE RFIEK+IN HKEQ+PGLLELY+QKLM
Sbjct: 301 KRLFPRGYVYQVLLSKGLIKKEKNLDLLFEPPEKRFIEKYINAHKEQVPGLLELYEQKLM 360

[Close]

BLAST of IVF0011990 vs. NCBI nr
Match: KAE8650381.1 (hypothetical protein Csa_010623 [Cucumis sativus])

HSP 1 Score: 597 bits (1539), Expect = 6.22e-213
Identity = 307/361 (85.04%), Postives = 329/361 (91.14%), Query Frame = 0


Query: 1   MYNLFRRIILLRSPSSVCTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60
           MYNLFRRIIL  SPSSV THGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK
Sbjct: 1   MYNLFRRIILPGSPSSVFTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60

Query: 61  TVIAFFENHGFSESQISDLVKKVPLILSANTETLFPVLLFFKSKGLSSPEITKFVCSAPQ 120
            +IAFFENHGFSESQISDL+KKVPLILSAN E LFP+LLFFKSKGLSSP ITK VC APQ
Sbjct: 61  AIIAFFENHGFSESQISDLIKKVPLILSANPEILFPILLFFKSKGLSSPAITKLVCFAPQ 120

Query: 121 VLKRSLNQEIIPVFDYIQAVLGTVEKTVATIKRFAGILGWNLRISVGPNIEILRQFGVPD 180
           +LKRSLNQEIIP FDYIQAVLGTVEKTVATIKRF  ILGWNLRISVGPNIEIL+QFGVPD
Sbjct: 121 ILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNLRISVGPNIEILKQFGVPD 180

Query: 181 SNISFYLQRQPKMFSISSIQFKEVVERVMEMGFNPQQLQFVVAVFALRSMTKSSWDKKVE 240
           SNIS YLQRQPK+FS SSI+FKE+VERV EMGFNPQ+LQF+VAV ALRS+TKSSWDKK+E
Sbjct: 181 SNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFNPQRLQFIVAVHALRSLTKSSWDKKLE 240

Query: 241 VYRKWGLSEEEFSLAFRRHPLCMTFSEDKINGVMDFFVNEIGWESSFVARRPVLISLSLK 300
           VYRKWGLSEEEF LAFR++P CM  SEDKIN  MDFF+N++G ESS VARRP L+S SLK
Sbjct: 241 VYRKWGLSEEEFYLAFRKYPWCMALSEDKINDTMDFFINKMGRESSLVARRPSLLSYSLK 300

Query: 301 KRLFPRGYVYQVLLSKGLIKKHKKLYLLFEYPEIRFIEKFINPHKEQIPGLLELYKQKLM 360
           KRLFPRGYVYQVLLSKGLIKK K L LLFE PE RFIEK+IN HKEQ+PGLLELY+QKLM
Sbjct: 301 KRLFPRGYVYQVLLSKGLIKKEKNLDLLFEPPEKRFIEKYINAHKEQVPGLLELYEQKLM 360

[Close]

BLAST of IVF0011990 vs. NCBI nr
Match: XP_011651039.2 (transcription termination factor MTERF6, chloroplastic/mitochondrial isoform X1 [Cucumis sativus])

HSP 1 Score: 597 bits (1539), Expect = 6.70e-213
Identity = 307/361 (85.04%), Postives = 329/361 (91.14%), Query Frame = 0


Query: 1   MYNLFRRIILLRSPSSVCTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60
           MYNLFRRIIL  SPSSV THGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK
Sbjct: 1   MYNLFRRIILPGSPSSVFTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60

Query: 61  TVIAFFENHGFSESQISDLVKKVPLILSANTETLFPVLLFFKSKGLSSPEITKFVCSAPQ 120
            +IAFFENHGFSESQISDL+KKVPLILSAN E LFP+LLFFKSKGLSSP ITK VC APQ
Sbjct: 61  AIIAFFENHGFSESQISDLIKKVPLILSANPEILFPILLFFKSKGLSSPAITKLVCFAPQ 120

Query: 121 VLKRSLNQEIIPVFDYIQAVLGTVEKTVATIKRFAGILGWNLRISVGPNIEILRQFGVPD 180
           +LKRSLNQEIIP FDYIQAVLGTVEKTVATIKRF  ILGWNLRISVGPNIEIL+QFGVPD
Sbjct: 121 ILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNLRISVGPNIEILKQFGVPD 180

Query: 181 SNISFYLQRQPKMFSISSIQFKEVVERVMEMGFNPQQLQFVVAVFALRSMTKSSWDKKVE 240
           SNIS YLQRQPK+FS SSI+FKE+VERV EMGFNPQ+LQF+VAV ALRS+TKSSWDKK+E
Sbjct: 181 SNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFNPQRLQFIVAVHALRSLTKSSWDKKLE 240

Query: 241 VYRKWGLSEEEFSLAFRRHPLCMTFSEDKINGVMDFFVNEIGWESSFVARRPVLISLSLK 300
           VYRKWGLSEEEF LAFR++P CM  SEDKIN  MDFF+N++G ESS VARRP L+S SLK
Sbjct: 241 VYRKWGLSEEEFYLAFRKYPWCMALSEDKINDTMDFFINKMGRESSLVARRPSLLSYSLK 300

Query: 301 KRLFPRGYVYQVLLSKGLIKKHKKLYLLFEYPEIRFIEKFINPHKEQIPGLLELYKQKLM 360
           KRLFPRGYVYQVLLSKGLIKK K L LLFE PE RFIEK+IN HKEQ+PGLLELY+QKLM
Sbjct: 301 KRLFPRGYVYQVLLSKGLIKKEKNLDLLFEPPEKRFIEKYINAHKEQVPGLLELYEQKLM 360

[Close]

BLAST of IVF0011990 vs. TAIR 10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 219.5 bits (558), Expect = 4.3e-57
Identity = 124/318 (38.99%), Postives = 195/318 (61.32%), Query Frame = 0


Query: 42  SPKSASLASNVVQLKNNRK--TVIAFFENHGFSESQISDLVKKVPLILSANTET-LFPVL 101
           SP SA++AS  + L +  +  TV+    +HGF+ +QIS LVKK P++L AN E+ L P L
Sbjct: 82  SPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVLLLANAESVLLPKL 141

Query: 102 LFFKSKGLSSPEITKFVCSAPQVLKRSLNQEIIPVFDYIQAVLGTVEKTVATIKRFAGIL 161
            FF S G+S   + + + S P +L RSL  ++IP ++++++VL + EK VA ++R   + 
Sbjct: 142 SFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDEKIVAALRRTTWVF 201

Query: 162 GWNLRISVGPNIEILRQFGVPDSNISFYLQRQPKMFSISSIQFKEVVERVMEMGFNPQQL 221
             +   ++ PNI  + + GVP+  I   L   P+     + +F+ + ++  EMGFNPQ+ 
Sbjct: 202 LEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIAKQAQEMGFNPQKS 261

Query: 222 QFVVAVFALRSM-TKSSWDKKVEVYRKWGLSEEEFSLAFRRHPLCMTFSEDKINGVMDFF 281
            FV+A+ AL     KS WDK  EVY++WG SE++   AF++HP CM  SE KIN  M++F
Sbjct: 262 TFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMMLSERKINRTMEYF 321

Query: 282 VNEIGWESSFVARRPVLISLSLKKRLFPRGYVYQVLLSKGLIKKHKKLYLLFEYPEIRFI 341
           VNE+      +A+ PV++  SL+KR+ PR  V +VL+S GL+K+   L  L    E  F+
Sbjct: 322 VNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWSLTSLLVPVEKVFL 381

Query: 342 EKFINPHKEQIPGLLELY 356
           EK +  ++E++P L+ LY
Sbjct: 382 EKLVIKYEEELPELMNLY 399

[Close]

BLAST of IVF0011990 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 198.4 bits (503), Expect = 1.0e-50
Identity = 110/318 (34.59%), Postives = 198/318 (62.26%), Query Frame = 0


Query: 42  SPKSASLASNVVQLKNNRK--TVIAFFENHGFSESQISDLVKKVPLILSANTE-TLFPVL 101
           S +SA   S  V+L +++K  +V+A F++HGF+  QI+ ++K  P +LS + E  + P L
Sbjct: 69  SLESAKSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFPRVLSLSPEDVISPKL 128

Query: 102 LFFKSKGLSSPEITKFVCSAPQVLKRSLNQEIIPVFDYIQAVLGTVEKTVATIKRFAGIL 161
           +FF S G S+ +  K + S+P++L  SL++ +IP +D ++++L   E  V  +KR  GI 
Sbjct: 129 MFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEEESVVKCLKR--GIR 188

Query: 162 GWNLRIS--VGPNIEILRQFGVPDSNISFYLQRQPKMFSISSIQFKEVVERVMEMGFNPQ 221
            ++L+I+  V   + I R+ GVPD +I + +Q  P  F     +F EV+ RV   GF+P+
Sbjct: 189 CFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEVLNRVCSYGFDPK 248

Query: 222 QLQFVVAVFALRSMTKSSWDKKVEVYRKWGLSEEEFSLAFRRHPLCMTFSEDKINGVMDF 281
           +  FV A+ A    ++S+ ++K ++++ +G S+E+F  A  R P C+T S++KI   +++
Sbjct: 249 KAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTVSDEKIMYTLEY 308

Query: 282 FVNEIGWESSFVARRPVLISLSLKKRLFPRGYVYQVLLSKGLIKKHK-KLYLLFEYPEIR 341
            VN IG ++  +  RPV++SLS++KR+ PR  V  +LLSKGL+KK     + + +     
Sbjct: 309 LVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDINYFTILKLKSSE 368

Query: 342 FIEKFINPHKEQIPGLLE 354
           F++KF+  +++++P L++
Sbjct: 369 FMDKFVLKYQDEMPQLVQ 384

[Close]

BLAST of IVF0011990 vs. TAIR 10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 148.7 bits (374), Expect = 9.3e-36
Identity = 96/324 (29.63%), Postives = 177/324 (54.63%), Query Frame = 0


Query: 43  PKSASLASNVVQLKN--NRKTVIAFFENHGFSESQISDLVKKVPLILSANTETLF-PVLL 102
           P + ++A     LK+    ++VI   +++ FS++QI   ++  P ++  N E +  P L 
Sbjct: 53  PLAIAIAMRYPNLKSLEQPRSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLR 112

Query: 103 FFKSKGLSSPEITKFVCSAPQVLKRSLNQEIIPVFDYIQAVLGTVEKTVATIKRFAG--I 162
           FFK  G +   + KFV     V+  SL +++IP  + +++++    + +  I    G  +
Sbjct: 113 FFKDIGFTGSGLGKFVSQNSSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGWLL 172

Query: 163 LGWNLRISVGPNIEILRQFGVPDSNISFYLQRQPKMFSISSIQFKEVVERVMEMGFNPQQ 222
           L  +  + + PNI  L   G+  S ++  L+RQP++F++S  + +  V R +++GF    
Sbjct: 173 LSRDPNLFLLPNISYLETCGIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNS 232

Query: 223 LQFVVAVFALRSMTKSSWDKKVEVYRKWGLSEEEFSLAFRRHPLCMTFSEDKINGVMDFF 282
              V AV +L S+++ ++D+KV+++   G SE+E +   RR P  +  SEDK+    +F+
Sbjct: 233 RMLVHAVISLSSLSEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFY 292

Query: 283 VNEIGWESSFVARRPVLISLSLKKRLFPRGYVYQVLLSKGLI----KKHKKLYLLFEYPE 342
           +  +G E   +A+RP ++S +L+KR+ PR  V Q+L  KGL+    KK K +  + E  E
Sbjct: 293 LKRMGLEREALAKRPCVLSYNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTE 352

Query: 343 IRFIEKFINPHKEQI-PGLLELYK 357
             F+EK++    ++I   LL  YK
Sbjct: 353 EAFLEKYVVRFGDEIAEELLVAYK 376

[Close]

BLAST of IVF0011990 vs. TAIR 10
Match: AT1G61970.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 132.1 bits (331), Expect = 9.0e-31
Identity = 93/340 (27.35%), Postives = 167/340 (49.12%), Query Frame = 0


Query: 56  KNNRKTVIAFFENHGFSESQISDLVKKVPLILSANTE-TLFPVLLFFKSKGLSSPEITKF 115
           KNN  +V+    +HGF+ SQIS +++  P +L A+ E +L P L F +S+G SS EIT+ 
Sbjct: 81  KNNPDSVLNLLTSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSEITEI 140

Query: 116 VCSAPQVLKRSLNQEIIPVFDYIQAVLGTVEKTVATIKRFAGILGWNLRISVGPNIEILR 175
           V S P++L +  ++ I   +D+I+  L  +EK+    K    +   NL   +  N+ +LR
Sbjct: 141 VSSVPEILGKKGHKTISVYYDFIKDTL--LEKSSKNEKLCHSLPQGNLENKI-RNVSVLR 200

Query: 176 QFGVPDSNISFYLQRQPKMFSISSIQFKEVVERVMEMGFNPQQLQFVVAVFALRSMTKSS 235
           + G+P   + F L            +F+E +++V+EMGF+P   +FV A+  +  M + +
Sbjct: 201 ELGMP-HKLLFSLLISDSQPVCGKEKFEETLKKVVEMGFDPTTSKFVEALQVIYKMNEKT 260

Query: 236 WDKKVEVY--------------RKW---------------------GLSEEEFSLAFRRH 295
            ++KV +Y              +KW                     G S +EF+   +  
Sbjct: 261 IEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLGLGFSRDEFAKMVKHF 320

Query: 296 PLCMTFSEDKINGVMDFFVNEIGWESSFVARRPVLISLSLKKRLFPRGYVYQVLLSKGLI 355
           P C+  S + +    +F V ++ W    V   P +   SL+KR+ PRG V + L+SKGL+
Sbjct: 321 PPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKALMSKGLM 380

Query: 356 KKH-KKLYLLFEYPEIRFIEKFINPH--KEQIPGLLELYK 357
           +     +  +    +  F+ +++  H  K+ +  L+ +Y+
Sbjct: 381 RNELPSISCVLMCTKQVFLNRYVANHVDKQLVTELMAIYR 416

[Close]

BLAST of IVF0011990 vs. TAIR 10
Match: AT1G61970.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 132.1 bits (331), Expect = 9.0e-31
Identity = 93/340 (27.35%), Postives = 167/340 (49.12%), Query Frame = 0


Query: 56  KNNRKTVIAFFENHGFSESQISDLVKKVPLILSANTE-TLFPVLLFFKSKGLSSPEITKF 115
           KNN  +V+    +HGF+ SQIS +++  P +L A+ E +L P L F +S+G SS EIT+ 
Sbjct: 81  KNNPDSVLNLLTSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSEITEI 140

Query: 116 VCSAPQVLKRSLNQEIIPVFDYIQAVLGTVEKTVATIKRFAGILGWNLRISVGPNIEILR 175
           V S P++L +  ++ I   +D+I+  L  +EK+    K    +   NL   +  N+ +LR
Sbjct: 141 VSSVPEILGKKGHKTISVYYDFIKDTL--LEKSSKNEKLCHSLPQGNLENKI-RNVSVLR 200

Query: 176 QFGVPDSNISFYLQRQPKMFSISSIQFKEVVERVMEMGFNPQQLQFVVAVFALRSMTKSS 235
           + G+P   + F L            +F+E +++V+EMGF+P   +FV A+  +  M + +
Sbjct: 201 ELGMP-HKLLFSLLISDSQPVCGKEKFEETLKKVVEMGFDPTTSKFVEALQVIYKMNEKT 260

Query: 236 WDKKVEVY--------------RKW---------------------GLSEEEFSLAFRRH 295
            ++KV +Y              +KW                     G S +EF+   +  
Sbjct: 261 IEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLGLGFSRDEFAKMVKHF 320

Query: 296 PLCMTFSEDKINGVMDFFVNEIGWESSFVARRPVLISLSLKKRLFPRGYVYQVLLSKGLI 355
           P C+  S + +    +F V ++ W    V   P +   SL+KR+ PRG V + L+SKGL+
Sbjct: 321 PPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKALMSKGLM 380

Query: 356 KKH-KKLYLLFEYPEIRFIEKFINPH--KEQIPGLLELYK 357
           +     +  +    +  F+ +++  H  K+ +  L+ +Y+
Sbjct: 381 RNELPSISCVLMCTKQVFLNRYVANHVDKQLVTELMAIYR 416

The following BLAST results are available for this feature:

BLAST of IVF0011990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JVI3	1.2e-06	25.42	Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9ZT96	4.8e-05	19.08	Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana O...	[more]

BLAST of IVF0011990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CW97	7.1e-201	100.00	Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3AXC4	7.1e-201	100.00	uncharacterized protein LOC103483817 OS=Cucumis melo OX=3656 GN=LOC103483817 PE=...	[more]
A0A5D3D105	1.1e-161	81.87	Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3AWZ8	1.1e-161	81.87	transcription termination factor MTEF1, chloroplastic-like OS=Cucumis melo OX=36...	[more]
A0A1S4DSR4	4.5e-147	76.71	uncharacterized protein LOC103483819 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of IVF0011990 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008438831.1	4.62e-257	100.00	PREDICTED: uncharacterized protein LOC103483817 [Cucumis melo] >KAA0049464.1 tra...	[more]
XP_011652761.2	6.99e-220	85.71	transcription termination factor MTERF6, chloroplastic/mitochondrial-like [Cucum...	[more]
XP_011651040.2	5.78e-213	85.04	transcription termination factor MTERF6, chloroplastic/mitochondrial isoform X2 ...	[more]
KAE8650381.1	6.22e-213	85.04	hypothetical protein Csa_010623 [Cucumis sativus]	[more]
XP_011651039.2	6.70e-213	85.04	transcription termination factor MTERF6, chloroplastic/mitochondrial isoform X1 ...	[more]

BLAST of IVF0011990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07900.1	4.3e-57	38.99	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	1.0e-50	34.59	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	9.3e-36	29.63	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.1	9.0e-31	27.35	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.2	9.0e-31	27.35	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 285..319 e-value: 110.0 score: 11.4 coord: 253..284 e-value: 0.024 score: 23.8 coord: 184..214 e-value: 230.0 score: 8.8 coord: 112..144 e-value: 12.0 score: 14.9 coord: 77..107 e-value: 0.21 score: 20.7 coord: 148..179 e-value: 960.0 score: 4.0
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 64..222 e-value: 9.3E-18 score: 64.2 coord: 188..321 e-value: 1.3E-14 score: 53.9
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 39..361
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 143..349 e-value: 1.0E-41 score: 144.8
None	No IPR available	PANTHER	PTHR13068:SF160	TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED	coord: 39..361

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0011990.1	IVF0011990.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003690	double-stranded DNA binding