
IVF0011956 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGTGTAACAGCTGGCTTGGTCGAGTAGCACATACGGAAGGAGAGGCGACAGCTTCGGGAGACAGTGACGAGCGGCTGAACCGCATTGGAGTCGTTCTGTTGCGGTGGTGTGGACGGAAACAACGGGCGACAGCTTCGGAAGGAGGAGATTGGGAACGAAAAGGGCGACGCTGGTCGGAGCTTGGGAAGAAGAAGAAGAAAATATCAAGAGGGTGA ATGTGGTGTAACAGCTGGCTTGGTCGAGTAGCACATACGGAAGGAGAGGCGACAGCTTCGGGAGACAGTGACGAGCGGCTGAACCGCATTGGAGTCGTTCTGTTGCGGTGGTGTGGACGGAAACAACGGGCGACAGCTTCGGAAGGAGGAGATTGGGAACGAAAAGGGCGACGCTGGTCGGAGCTTGGGAAGAAGAAGAAGAAAATATCAAGAGGGTGA ATGTGGTGTAACAGCTGGCTTGGTCGAGTAGCACATACGGAAGGAGAGGCGACAGCTTCGGGAGACAGTGACGAGCGGCTGAACCGCATTGGAGTCGTTCTGTTGCGGTGGTGTGGACGGAAACAACGGGCGACAGCTTCGGAAGGAGGAGATTGGGAACGAAAAGGGCGACGCTGGTCGGAGCTTGGGAAGAAGAAGAAGAAAATATCAAGAGGGTGA MWCNSWLGRVAHTEGEATASGDSDERLNRIGVVLLRWCGRKQRATASEGGDWERKGRRWSELGKKKKKISRG Homology
BLAST of IVF0011956 vs. ExPASy TrEMBL
Match: A0A5A7V8U7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold828G00560 PE=4 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 6.2e-24 Identity = 58/72 (80.56%), Postives = 61/72 (84.72%), Query Frame = 0
BLAST of IVF0011956 vs. ExPASy TrEMBL
Match: A0A5A7TSJ4 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G005930 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 6.9e-07 Identity = 27/29 (93.10%), Postives = 28/29 (96.55%), Query Frame = 0
BLAST of IVF0011956 vs. ExPASy TrEMBL
Match: A0A5D3DXY0 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1467G00030 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 3.4e-06 Identity = 34/66 (51.52%), Postives = 39/66 (59.09%), Query Frame = 0
BLAST of IVF0011956 vs. NCBI nr
Match: KAA0063417.1 (hypothetical protein E6C27_scaffold508G00570 [Cucumis melo var. makuwa] >TYK11679.1 hypothetical protein E5676_scaffold828G00560 [Cucumis melo var. makuwa]) HSP 1 Score: 120 bits (300), Expect = 5.14e-33 Identity = 58/72 (80.56%), Postives = 61/72 (84.72%), Query Frame = 0
BLAST of IVF0011956 vs. NCBI nr
Match: KAA0046024.1 (gag protease polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 63.9 bits (154), Expect = 9.72e-10 Identity = 31/44 (70.45%), Postives = 33/44 (75.00%), Query Frame = 0
BLAST of IVF0011956 vs. NCBI nr
Match: TYK28100.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]) HSP 1 Score: 61.6 bits (148), Expect = 2.22e-09 Identity = 34/65 (52.31%), Postives = 38/65 (58.46%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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