IVF0011935 (gene) Melon (IVF77) v1

Overview
NameIVF0011935
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase
Locationchr04: 10983036 .. 10987666 (-)
RNA-Seq ExpressionIVF0011935
SyntenyIVF0011935
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGAAACGATCCTTGCCGCTCGTCAGGTACGCTCTCATGAAAGTATATGTATAACTCTACATGCATTACCTTACCTAAGTTAAACTGCAAATTCAATTACCATTTATGACTAAAGGAATCGTTGGTGGTTGTTAGGGAAATGCCACCAAGGAGAGGTGCACGTAGGGGTGGCCGAGGAGGCCGAGGAAGGGGAGCAGGACGCGTTCAGCCTGAGGTGCAGCCTGTAGCCCAAGCCCCTGACCCGGCTGCGCCAGTTACTCATGCGGACCTAGCCGCCATGGAGCAGAGGTTTAGAGATATGATTATGCAGATGCGGGAGCAGCAGAAGCCTGCCTCGCCAACTCCGGCGCCAGCTCCAGCGCCAGCTCCAGCACCAGTTCCTGCTCCAGCTCCGGCTCCGGTACCAGTTGCACCCCAGTTTGTGCCGGATCAGTTGTCAGCAGAGGCTAAGCATCTGAGGGATTTCAGGAAGTATAATCCCACGACGTTCGATGGGTCTTTGGAGGACCCCACCAGAGCTCAGATGTGGTTATCGTCCTTGGAAACCATATTCCGTTACATGAAATGCCCTGAGGATCAGAAGGTTCAGTGTGCTGTTTTTATGTTGACTGACAGAGGTACTGCATGGTGGGAGACTACAGAGAGGATGCTAGGTGGTGATGTGAGTCAGATCACGTGGCAGCAGTTCAAGGAGAGTTTCTATGCGAAATTCTTCTCTGCCAGTTTGAGAGATGCCAAGCGGCAGGAGTTCCTGAACCTAGAGCAGGGTGACATGACAGTGGAGCAGTATGATGCGGAGTTTGACATGTTATCCCGCTTCGCTCCCGAGATGATAGCGACCGAGGCGGCCAGAGCTGATAAGTTTGTTAGAGGCCTCAGACTGGACATTCAGGGTTTGGTCCGAGCTTTCAGACCCGCTACTCATGCCGATGCACTGCGCCTGGCAGTGGATCTCAGTTTACAGGAGAGGGCCAACTCGTCTAAGACCGCTGGTAGAGGTTCGACATCGGGACAGAAGAGGAAGGCTGAGCAGCAGCCTGTTCCAGTGCCACAGCGGAATTTCAGACCAGGTGGTGAGTTTCGCAGCTTCCAGCAGAAACCTTTTGAGGCAGGGGAGGCTGCCAGAGGAAAGCCGTTGTGTACCACTTGTGGGAAGCACCATCTGGGCCGTTGCTTATTCGGGACCAGGACCTGCTTTAAGTGCAGGCAAGAGGGTCATACAGCTGATAGATGCCCGTTGAGACTCACGGGGATCGCGCAGAATCAGGGAGCAGGTGCTCCACATCAGGGTAGAGTCTTTGCTACCAACAGGACTGAGGCTGAGAAGGCAGGCACAGTAGTGACAGGTACGCTCCCAGTGTTGGGGCATTACGCCTTAGTTTTGTTTGATTCGGGTTCGTCACATTCTTTTATCTCTTCCGCATTTGTGTCGCATGCCCGCTTAGAGGTAGAGCCCTTACACCATGTTCTGTCAGTATCTACTCCTTCCGGGGAATGTATGTTGTCGAAGGAAAAGGTGAAGGCATGTCAGATTGAGATAGCAGGCCATGTGATTGAAGTAACGCTGATAGTCCTGGATATGCTGGACTTTGATGTAATCCTGGGTATGGATTGGTTGGCCGCTAACCACGCCAGCATAGATTGTTCACGTAAGGAGGTAACGTTTAACCCTCCCTCGATGGCCAGTTTTAAATTTAAGGGAGGAGGGTCAAAGTCGTTGCCTCAGGTAATCTCAGCCATCAGGGCCAGTAAACTGCTCAGTCAGGGTACTTGGGGTATCTTAGCGAGCGTGGTGGATACTAGAGAGGCCGATGTATCCCTGTCATCAGAACCAGTAGTGAGGGACTATCCGGACGTTTTTCCTGAGGAACTTCCAGGGTTACCTCCGCACAGAGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAGAGCCCCTTACAGAATGGCCCCCGCAGAACTGAAAGAACTGAAGGTACAGTTACAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTCTTATTGTTAAGAAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATTGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGAATTAAGGATGAGGATGTACCGAAGACAGCATTTCGTTCCAGATATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTATTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATCGACGATATCTTGATATACTCCAAGACGGAGGCCGAACACGAGGAGCATTTACGTATGGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGCTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGAAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGACCCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGTTTGGGTTGTGTTTTGATGCAGCAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAGATATGGAGGCATTATTTATATGGTGAAAAGATACAGATATTCACAGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGGAAAGTATCACATTCAGCAGCACTTATTACCCGGCAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTTACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAGAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAACGGCTGAGTTCTCGTTATCCTCTGATGGTGGACTGTTGTTTGAGAGACGCCTCTGTGTTCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCGCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGAAGTAGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAGAACGTGTCCATGGATTTCATTACAGGGCTACCGAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTGTGGTGGACAGACTTACTAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGATTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTTTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTTGGACTTTAGTACGGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTGCGGGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCGTTTGAGGCCCTGTACGGCAGATGTTGTAGATCCCCGGTTTGCTGGGGTGAGGTAGGTGAGCAGAGATTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCGATTCAGAAGATTAGATCACGCATGCATACCGCTCAGAGTAGACAGAAGAGTTATGCAGATGTGAGGCGGAAGGACCTTGAGTTTGAGATAGGGGATAAGGTGTTCTTAAAGGTAGCACCTATGAAAGGTGTCTTGCGTTTTGAAAGGAGGGGAAAGTTGAGTCCCCGTTTTGTTGGGCCATTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCTCCATCACTCTCGACAGTCCATGATGTGTTTCACGTTTCTATGTTGAGGAAGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCACTAGAGATTGATGAAAACTTGAGCTATGTTGAACAACCTGTTGAGGTGCTTGCTAGAGAGGTGAAGACGTTGAGAAATAAACAATTCCCCTAG

mRNA sequence

ATGGCTGAAACGATCCTTGCCGCTCGTCAGGAATCGTTGGTGGTTGTTAGGGAAATGCCACCAAGGAGAGGTGCACGTAGGGGTGGCCGAGGAGGCCGAGGAAGGGGAGCAGGACGCGTTCAGCCTGAGGTGCAGCCTGTAGCCCAAGCCCCTGACCCGGCTGCGCCAGTTACTCATGCGGACCTAGCCGCCATGGAGCAGAGGTTTAGAGATATGATTATGCAGATGCGGGAGCAGCAGAAGCCTGCCTCGCCAACTCCGGCGCCAGCTCCAGCGCCAGCTCCAGCACCAGTTCCTGCTCCAGCTCCGGCTCCGGTACCAGTTGCACCCCAGTTTGTGCCGGATCAGTTGTCAGCAGAGGCTAAGCATCTGAGGGATTTCAGGAAGTATAATCCCACGACGTTCGATGGGTCTTTGGAGGACCCCACCAGAGCTCAGATGTGGTTATCGTCCTTGGAAACCATATTCCGTTACATGAAATGCCCTGAGGATCAGAAGGTTCAGTGTGCTGTTTTTATGTTGACTGACAGAGGTACTGCATGGTGGGAGACTACAGAGAGGATGCTAGGTGGTGATGTGAGTCAGATCACGTGGCAGCAGTTCAAGGAGAGTTTCTATGCGAAATTCTTCTCTGCCAGTTTGAGAGATGCCAAGCGGCAGGAGTTCCTGAACCTAGAGCAGGGTGACATGACAGTGGAGCAGTATGATGCGGAGTTTGACATGTTATCCCGCTTCGCTCCCGAGATGATAGCGACCGAGGCGGCCAGAGCTGATAAGTTTGTTAGAGGCCTCAGACTGGACATTCAGGGTTTGGTCCGAGCTTTCAGACCCGCTACTCATGCCGATGCACTGCGCCTGGCAGTGGATCTCAGTTTACAGGAGAGGGCCAACTCGTCTAAGACCGCTGGTAGAGGTTCGACATCGGGACAGAAGAGGAAGGCTGAGCAGCAGCCTGTTCCAGTGCCACAGCGGAATTTCAGACCAGGTGGTGAGTTTCGCAGCTTCCAGCAGAAACCTTTTGAGGCAGGGGAGGCTGCCAGAGGAAAGCCGTTGTGTACCACTTGTGGGAAGCACCATCTGGGCCGTTGCTTATTCGGGACCAGGACCTGCTTTAAGTGCAGGCAAGAGGGTCATACAGCTGATAGATGCCCGTTGAGACTCACGGGGATCGCGCAGAATCAGGGAGCAGGTGCTCCACATCAGGGTAGAGTCTTTGCTACCAACAGGACTGAGGCTGAGAAGGCAGGCACAGTAGTGACAGGTACGCTCCCAGTGTTGGGGCATTACGCCTTAGTTTTGTTTGATTCGGGTTCGTCACATTCTTTTATCTCTTCCGCATTTGTGTCGCATGCCCGCTTAGAGGTAGAGCCCTTACACCATGTTCTGTCAGTATCTACTCCTTCCGGGGAATGTATGTTGTCGAAGGAAAAGGTGAAGGCATGTCAGATTGAGATAGCAGGCCATGTGATTGAAGTAACGCTGATAGTCCTGGATATGCTGGACTTTGATGTAATCCTGGGTATGGATTGGTTGGCCGCTAACCACGCCAGCATAGATTGTTCACGTAAGGAGGTAACGTTTAACCCTCCCTCGATGGCCAGTTTTAAATTTAAGGGAGGAGGGTCAAAGTCGTTGCCTCAGGTAATCTCAGCCATCAGGGCCAGTAAACTGCTCAGTCAGGGTACTTGGGGTATCTTAGCGAGCGTGGTGGATACTAGAGAGGCCGATGTATCCCTGTCATCAGAACCAGTAGTGAGGGACTATCCGGACGTTTTTCCTGAGGAACTTCCAGGGTTACCTCCGCACAGAGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAGAGCCCCTTACAGAATGGCCCCCGCAGAACTGAAAGAACTGAAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGAATTAAGGATGAGGATGTACCGAAGACAGCATTTCGTTCCAGATATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTATTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATCGACGATATCTTGATATACTCCAAGACGGAGGCCGAACACGAGGAGCATTTACGTATGGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGCTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGAAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGACCCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGCAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAGATATGGAGGCATTATTTATATGGTGAAAAGATACAGATATTCACAGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGGAAAGTATCACATTCAGCAGCACTTATTACCCGGCAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTTACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAGAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAACGGCTGAGTTCTCGTTATCCTCTGATGGTGGACTGTTGTTTGAGAGACGCCTCTGTGTTCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCGCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAGAACGTGTCCATGGATTTCATTACAGGGCTACCGAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTGTGGTGGACAGACTTACTAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGATTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTTTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTTGGACTTTAGTACGGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTGCGGGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCGTTTGAGGCCCTGTACGGCAGATGTTGTAGATCCCCGGTTTGCTGGGGTGAGGTAGGTGAGCAGAGATTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCGATTCAGAAGATTAGATCACGCATGCATACCGCTCAGAGTAGACAGAAGAGTTATGCAGATGTGAGGCGGAAGGACCTTGAGTTTGAGATAGGGGATAAGGTGTTCTTAAAGGTAGCACCTATGAAAGGTGTCTTGCGTTTTGAAAGGAGGGGAAAGTTGAGTCCCCGTTTTGTTGGGCCATTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCTCCATCACTCTCGACAGTCCATGATGTGTTTCACGTTTCTATGTTGAGGAAGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCACTAGAGATTGATGAAAACTTGAGCTATGTTGAACAACCTGTTGAGGTGCTTGCTAGAGAGGTGAAGACGTTGAGAAATAAACAATTCCCCTAG

Coding sequence (CDS)

ATGGCTGAAACGATCCTTGCCGCTCGTCAGGAATCGTTGGTGGTTGTTAGGGAAATGCCACCAAGGAGAGGTGCACGTAGGGGTGGCCGAGGAGGCCGAGGAAGGGGAGCAGGACGCGTTCAGCCTGAGGTGCAGCCTGTAGCCCAAGCCCCTGACCCGGCTGCGCCAGTTACTCATGCGGACCTAGCCGCCATGGAGCAGAGGTTTAGAGATATGATTATGCAGATGCGGGAGCAGCAGAAGCCTGCCTCGCCAACTCCGGCGCCAGCTCCAGCGCCAGCTCCAGCACCAGTTCCTGCTCCAGCTCCGGCTCCGGTACCAGTTGCACCCCAGTTTGTGCCGGATCAGTTGTCAGCAGAGGCTAAGCATCTGAGGGATTTCAGGAAGTATAATCCCACGACGTTCGATGGGTCTTTGGAGGACCCCACCAGAGCTCAGATGTGGTTATCGTCCTTGGAAACCATATTCCGTTACATGAAATGCCCTGAGGATCAGAAGGTTCAGTGTGCTGTTTTTATGTTGACTGACAGAGGTACTGCATGGTGGGAGACTACAGAGAGGATGCTAGGTGGTGATGTGAGTCAGATCACGTGGCAGCAGTTCAAGGAGAGTTTCTATGCGAAATTCTTCTCTGCCAGTTTGAGAGATGCCAAGCGGCAGGAGTTCCTGAACCTAGAGCAGGGTGACATGACAGTGGAGCAGTATGATGCGGAGTTTGACATGTTATCCCGCTTCGCTCCCGAGATGATAGCGACCGAGGCGGCCAGAGCTGATAAGTTTGTTAGAGGCCTCAGACTGGACATTCAGGGTTTGGTCCGAGCTTTCAGACCCGCTACTCATGCCGATGCACTGCGCCTGGCAGTGGATCTCAGTTTACAGGAGAGGGCCAACTCGTCTAAGACCGCTGGTAGAGGTTCGACATCGGGACAGAAGAGGAAGGCTGAGCAGCAGCCTGTTCCAGTGCCACAGCGGAATTTCAGACCAGGTGGTGAGTTTCGCAGCTTCCAGCAGAAACCTTTTGAGGCAGGGGAGGCTGCCAGAGGAAAGCCGTTGTGTACCACTTGTGGGAAGCACCATCTGGGCCGTTGCTTATTCGGGACCAGGACCTGCTTTAAGTGCAGGCAAGAGGGTCATACAGCTGATAGATGCCCGTTGAGACTCACGGGGATCGCGCAGAATCAGGGAGCAGGTGCTCCACATCAGGGTAGAGTCTTTGCTACCAACAGGACTGAGGCTGAGAAGGCAGGCACAGTAGTGACAGGTACGCTCCCAGTGTTGGGGCATTACGCCTTAGTTTTGTTTGATTCGGGTTCGTCACATTCTTTTATCTCTTCCGCATTTGTGTCGCATGCCCGCTTAGAGGTAGAGCCCTTACACCATGTTCTGTCAGTATCTACTCCTTCCGGGGAATGTATGTTGTCGAAGGAAAAGGTGAAGGCATGTCAGATTGAGATAGCAGGCCATGTGATTGAAGTAACGCTGATAGTCCTGGATATGCTGGACTTTGATGTAATCCTGGGTATGGATTGGTTGGCCGCTAACCACGCCAGCATAGATTGTTCACGTAAGGAGGTAACGTTTAACCCTCCCTCGATGGCCAGTTTTAAATTTAAGGGAGGAGGGTCAAAGTCGTTGCCTCAGGTAATCTCAGCCATCAGGGCCAGTAAACTGCTCAGTCAGGGTACTTGGGGTATCTTAGCGAGCGTGGTGGATACTAGAGAGGCCGATGTATCCCTGTCATCAGAACCAGTAGTGAGGGACTATCCGGACGTTTTTCCTGAGGAACTTCCAGGGTTACCTCCGCACAGAGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAGAGCCCCTTACAGAATGGCCCCCGCAGAACTGAAAGAACTGAAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGAATTAAGGATGAGGATGTACCGAAGACAGCATTTCGTTCCAGATATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTATTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATCGACGATATCTTGATATACTCCAAGACGGAGGCCGAACACGAGGAGCATTTACGTATGGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGCTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGAAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGACCCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGCAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAGATATGGAGGCATTATTTATATGGTGAAAAGATACAGATATTCACAGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGGAAAGTATCACATTCAGCAGCACTTATTACCCGGCAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTTACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAGAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAACGGCTGAGTTCTCGTTATCCTCTGATGGTGGACTGTTGTTTGAGAGACGCCTCTGTGTTCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCGCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAGAACGTGTCCATGGATTTCATTACAGGGCTACCGAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTGTGGTGGACAGACTTACTAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGATTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTTTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTTGGACTTTAGTACGGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTGCGGGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCGTTTGAGGCCCTGTACGGCAGATGTTGTAGATCCCCGGTTTGCTGGGGTGAGGTAGGTGAGCAGAGATTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCGATTCAGAAGATTAGATCACGCATGCATACCGCTCAGAGTAGACAGAAGAGTTATGCAGATGTGAGGCGGAAGGACCTTGAGTTTGAGATAGGGGATAAGGTGTTCTTAAAGGTAGCACCTATGAAAGGTGTCTTGCGTTTTGAAAGGAGGGGAAAGTTGAGTCCCCGTTTTGTTGGGCCATTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCTCCATCACTCTCGACAGTCCATGATGTGTTTCACGTTTCTATGTTGAGGAAGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCACTAGAGATTGATGAAAACTTGAGCTATGTTGAACAACCTGTTGAGGTGCTTGCTAGAGAGGTGAAGACGTTGAGAAATAAACAATTCCCCTAG

Protein sequence

MAETILAARQESLVVVREMPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMREQQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGSSHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNKQFP
Homology
[Close]
BLAST of IVF0011935 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 1.8e-111
Identity = 255/793 (32.16%), Postives = 409/793 (51.58%), Query Frame = 0 

Query: 630  LKELKGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDL 689
            L +++G+T+F+K+DL+S YH +R++  D  K AFR   G +E++VM +G++ APA F   
Sbjct: 489  LAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYF 548

Query: 690  MNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQV 749
            +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV
Sbjct: 549  INTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQV 608

Query: 750  SFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQ 809
             F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  
Sbjct: 609  KFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNN 668

Query: 810  LTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASK-KQGKV------ 869
            L +K   + W+     + + +KQ LV+ PVL   D S   ++ +DAS    G V      
Sbjct: 669  LLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHD 728

Query: 870  ------VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKY 929
                  V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L  
Sbjct: 729  DDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIG 788

Query: 930  FFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 989
              T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +
Sbjct: 789  RITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPK 848

Query: 990  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSS 1049
            D E   I          + Q+++    + +++   +ND  L+    L    +  E ++  
Sbjct: 849  DSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQL 908

Query: 1050 DGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR------------ 1109
              GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R            
Sbjct: 909  KDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQ 968

Query: 1110 -----------VKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDR 1169
                        K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR
Sbjct: 969  EYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDR 1028

Query: 1170 LTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTR 1229
             +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         
Sbjct: 1029 FSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFV 1088

Query: 1230 LDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAP 1289
            + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M P
Sbjct: 1089 MKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTP 1148

Query: 1290 FEALYGRC-CRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRK 1349
            FE ++      SP+   E+        E  Q T +  Q ++  ++T   + K Y D++ +
Sbjct: 1149 FEIVHRYSPALSPL---ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQ 1208

Query: 1350 DL-EFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV 1378
            ++ EF+ GD V +K     G L   +  KL+P F GPF +L++ GP  Y L LP S+  +
Sbjct: 1209 EIEEFQPGDLVMVK-RTKTGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHM 1257

[Close]
BLAST of IVF0011935 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 1.8e-111
Identity = 255/793 (32.16%), Postives = 409/793 (51.58%), Query Frame = 0 

Query: 630  LKELKGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDL 689
            L +++G+T+F+K+DL+S YH +R++  D  K AFR   G +E++VM +G++ APA F   
Sbjct: 489  LAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYF 548

Query: 690  MNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQV 749
            +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV
Sbjct: 549  INTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQV 608

Query: 750  SFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQ 809
             F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  
Sbjct: 609  KFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNN 668

Query: 810  LTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASK-KQGKV------ 869
            L +K   + W+     + + +KQ LV+ PVL   D S   ++ +DAS    G V      
Sbjct: 669  LLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHD 728

Query: 870  ------VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKY 929
                  V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L  
Sbjct: 729  DDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIG 788

Query: 930  FFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 989
              T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +
Sbjct: 789  RITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPK 848

Query: 990  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSS 1049
            D E   I          + Q+++    + +++   +ND  L+    L    +  E ++  
Sbjct: 849  DSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQL 908

Query: 1050 DGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR------------ 1109
              GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R            
Sbjct: 909  KDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQ 968

Query: 1110 -----------VKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDR 1169
                        K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR
Sbjct: 969  EYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDR 1028

Query: 1170 LTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTR 1229
             +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         
Sbjct: 1029 FSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFV 1088

Query: 1230 LDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAP 1289
            + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M P
Sbjct: 1089 MKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTP 1148

Query: 1290 FEALYGRC-CRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRK 1349
            FE ++      SP+   E+        E  Q T +  Q ++  ++T   + K Y D++ +
Sbjct: 1149 FEIVHRYSPALSPL---ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQ 1208

Query: 1350 DL-EFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV 1378
            ++ EF+ GD V +K     G L   +  KL+P F GPF +L++ GP  Y L LP S+  +
Sbjct: 1209 EIEEFQPGDLVMVK-RTKTGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHM 1257

[Close]
BLAST of IVF0011935 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 1.8e-111
Identity = 255/793 (32.16%), Postives = 409/793 (51.58%), Query Frame = 0 

Query: 630  LKELKGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDL 689
            L +++G+T+F+K+DL+S YH +R++  D  K AFR   G +E++VM +G++ APA F   
Sbjct: 489  LAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYF 548

Query: 690  MNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQV 749
            +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV
Sbjct: 549  INTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQV 608

Query: 750  SFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQ 809
             F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  
Sbjct: 609  KFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNN 668

Query: 810  LTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASK-KQGKV------ 869
            L +K   + W+     + + +KQ LV+ PVL   D S   ++ +DAS    G V      
Sbjct: 669  LLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHD 728

Query: 870  ------VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKY 929
                  V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L  
Sbjct: 729  DDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIG 788

Query: 930  FFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 989
              T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +
Sbjct: 789  RITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPK 848

Query: 990  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSS 1049
            D E   I          + Q+++    + +++   +ND  L+    L    +  E ++  
Sbjct: 849  DSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQL 908

Query: 1050 DGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR------------ 1109
              GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R            
Sbjct: 909  KDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQ 968

Query: 1110 -----------VKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDR 1169
                        K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR
Sbjct: 969  EYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDR 1028

Query: 1170 LTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTR 1229
             +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         
Sbjct: 1029 FSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFV 1088

Query: 1230 LDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAP 1289
            + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M P
Sbjct: 1089 MKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTP 1148

Query: 1290 FEALYGRC-CRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRK 1349
            FE ++      SP+   E+        E  Q T +  Q ++  ++T   + K Y D++ +
Sbjct: 1149 FEIVHRYSPALSPL---ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQ 1208

Query: 1350 DL-EFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV 1378
            ++ EF+ GD V +K     G L   +  KL+P F GPF +L++ GP  Y L LP S+  +
Sbjct: 1209 EIEEFQPGDLVMVK-RTKTGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHM 1257

[Close]
BLAST of IVF0011935 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 1.8e-111
Identity = 255/793 (32.16%), Postives = 409/793 (51.58%), Query Frame = 0 

Query: 630  LKELKGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDL 689
            L +++G+T+F+K+DL+S YH +R++  D  K AFR   G +E++VM +G++ APA F   
Sbjct: 489  LAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYF 548

Query: 690  MNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQV 749
            +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV
Sbjct: 549  INTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQV 608

Query: 750  SFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQ 809
             F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  
Sbjct: 609  KFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNN 668

Query: 810  LTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASK-KQGKV------ 869
            L +K   + W+     + + +KQ LV+ PVL   D S   ++ +DAS    G V      
Sbjct: 669  LLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHD 728

Query: 870  ------VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKY 929
                  V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L  
Sbjct: 729  DDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIG 788

Query: 930  FFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 989
              T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +
Sbjct: 789  RITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPK 848

Query: 990  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSS 1049
            D E   I          + Q+++    + +++   +ND  L+    L    +  E ++  
Sbjct: 849  DSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQL 908

Query: 1050 DGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR------------ 1109
              GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R            
Sbjct: 909  KDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQ 968

Query: 1110 -----------VKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDR 1169
                        K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR
Sbjct: 969  EYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDR 1028

Query: 1170 LTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTR 1229
             +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         
Sbjct: 1029 FSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFV 1088

Query: 1230 LDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAP 1289
            + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M P
Sbjct: 1089 MKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTP 1148

Query: 1290 FEALYGRC-CRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRK 1349
            FE ++      SP+   E+        E  Q T +  Q ++  ++T   + K Y D++ +
Sbjct: 1149 FEIVHRYSPALSPL---ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQ 1208

Query: 1350 DL-EFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV 1378
            ++ EF+ GD V +K     G L   +  KL+P F GPF +L++ GP  Y L LP S+  +
Sbjct: 1209 EIEEFQPGDLVMVK-RTKTGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHM 1257

[Close]
BLAST of IVF0011935 vs. ExPASy Swiss-Prot
Match: P0CT37 (Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-4 PE=3 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 1.8e-111
Identity = 255/793 (32.16%), Postives = 409/793 (51.58%), Query Frame = 0 

Query: 630  LKELKGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDL 689
            L +++G+T+F+K+DL+S YH +R++  D  K AFR   G +E++VM +G++ APA F   
Sbjct: 489  LAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYF 548

Query: 690  MNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQV 749
            +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV
Sbjct: 549  INTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQV 608

Query: 750  SFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQ 809
             F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  
Sbjct: 609  KFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNN 668

Query: 810  LTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASK-KQGKV------ 869
            L +K   + W+     + + +KQ LV+ PVL   D S   ++ +DAS    G V      
Sbjct: 669  LLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHD 728

Query: 870  ------VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKY 929
                  V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L  
Sbjct: 729  DDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIG 788

Query: 930  FFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 989
              T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +
Sbjct: 789  RITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPK 848

Query: 990  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSS 1049
            D E   I          + Q+++    + +++   +ND  L+    L    +  E ++  
Sbjct: 849  DSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQL 908

Query: 1050 DGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR------------ 1109
              GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R            
Sbjct: 909  KDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQ 968

Query: 1110 -----------VKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDR 1169
                        K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR
Sbjct: 969  EYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDR 1028

Query: 1170 LTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTR 1229
             +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         
Sbjct: 1029 FSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFV 1088

Query: 1230 LDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAP 1289
            + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M P
Sbjct: 1089 MKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTP 1148

Query: 1290 FEALYGRC-CRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRK 1349
            FE ++      SP+   E+        E  Q T +  Q ++  ++T   + K Y D++ +
Sbjct: 1149 FEIVHRYSPALSPL---ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQ 1208

Query: 1350 DL-EFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV 1378
            ++ EF+ GD V +K     G L   +  KL+P F GPF +L++ GP  Y L LP S+  +
Sbjct: 1209 EIEEFQPGDLVMVK-RTKTGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHM 1257

[Close]
BLAST of IVF0011935 vs. ExPASy TrEMBL
Match: A0A5A7VJE2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G005560 PE=4 SV=1)

HSP 1 Score: 2691.4 bits (6975), Expect = 0.0e+00
Identity = 1371/1466 (93.52%), Postives = 1382/1466 (94.27%), Query Frame = 0 

Query: 19   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 78
            MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE
Sbjct: 1    MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 60

Query: 79   QQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 138
            QQKP SP PAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 61   QQKPVSPNPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 120

Query: 139  LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 198
            LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW
Sbjct: 121  LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180

Query: 199  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 258
            QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD
Sbjct: 181  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240

Query: 259  KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 318
            KFVRGLRLDIQGLVRAFRPATH DALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
Sbjct: 241  KFVRGLRLDIQGLVRAFRPATHVDALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300

Query: 319  VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 378
            VPVPQRNFR GGEFR FQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH
Sbjct: 301  VPVPQRNFRSGGEFRYFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360

Query: 379  TADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGS 438
            TADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGT+VTGTLPVLGHYALVLF SGS
Sbjct: 361  TADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTIVTGTLPVLGHYALVLFYSGS 420

Query: 439  SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 498
            SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD
Sbjct: 421  SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 480

Query: 499  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 558
            MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL
Sbjct: 481  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 540

Query: 559  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 618
            SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELE GTVPI
Sbjct: 541  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELESGTVPI 600

Query: 619  SRAPYRMAPAELKELK----------------------------------GATVFSKIDL 678
            SRAPYRMAPAELK+LK                                  GATVFSKIDL
Sbjct: 601  SRAPYRMAPAELKDLKVQLQELLDKGELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDL 660

Query: 679  RSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV 738
            RSGYHQLRIKDEDVPKT FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
Sbjct: 661  RSGYHQLRIKDEDVPKTTFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV 720

Query: 739  FIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVD 798
            FIDDILIYSKTEAEHEEHLRMVLQTLRD KLYAKFSKCEFWLKQVSFLGHVVSKAGVSVD
Sbjct: 721  FIDDILIYSKTEAEHEEHLRMVLQTLRDYKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVD 780

Query: 799  PAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACE 858
            PAKIEAVTGWTRPSTVSEVRSFLGL GYYRRFVENFSRIATPLTQLTRKG PFVWSKACE
Sbjct: 781  PAKIEAVTGWTRPSTVSEVRSFLGLVGYYRRFVENFSRIATPLTQLTRKGVPFVWSKACE 840

Query: 859  DSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKK--------QGKVVAYASRQLKSHEQN 918
            DSFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKK        QGKVVAYASRQLKSHEQN
Sbjct: 841  DSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQN 900

Query: 919  YPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYD 978
            YPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYD
Sbjct: 901  YPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYD 960

Query: 979  CEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQ 1038
            CEILYHPGKANVVADALSRKVSHS ALITRQAPLHRDLERAEIAVS+GAVTMQLA+L VQ
Sbjct: 961  CEILYHPGKANVVADALSRKVSHSVALITRQAPLHRDLERAEIAVSMGAVTMQLARLAVQ 1020

Query: 1039 PTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLS 1098
            PTLRQRIIDAQ NDPYLVEKRGL EAGQTAEFSLSSDGGLLFERRLCVPSDSAVK ELLS
Sbjct: 1021 PTLRQRIIDAQGNDPYLVEKRGLVEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKIELLS 1080

Query: 1099 EAHSSPFSMHPGSTKMYQDLKR-----------------------VKAPRQKPAGLLQPL 1158
            EAHSSPFSMHPGSTK+YQDLKR                       VKAPRQKPAGLLQPL
Sbjct: 1081 EAHSSPFSMHPGSTKIYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPL 1140

Query: 1159 SIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSE 1218
            SIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSE
Sbjct: 1141 SIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSE 1200

Query: 1219 IVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDML 1278
            IVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDML
Sbjct: 1201 IVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDML 1260

Query: 1279 RACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLMGP 1338
            RACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLMGP
Sbjct: 1261 RACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLMGP 1320

Query: 1339 ELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRG 1398
            ELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFE+GDKVFLKVAPM+GV+RFERRG
Sbjct: 1321 ELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRG 1380

Query: 1399 KLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEID 1420
            KLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEID
Sbjct: 1381 KLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEID 1440

[Close]
BLAST of IVF0011935 vs. ExPASy TrEMBL
Match: A0A5A7U330 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00040 PE=4 SV=1)

HSP 1 Score: 2607.0 bits (6756), Expect = 0.0e+00
Identity = 1341/1496 (89.64%), Postives = 1355/1496 (90.57%), Query Frame = 0 

Query: 19   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 78
            MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRD+IMQMRE
Sbjct: 1    MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE 60

Query: 79   QQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 138
            QQKPASPTPAPAPAPAPAP PAPA APVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 61   QQKPASPTPAPAPAPAPAPAPAPALAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 120

Query: 139  LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 198
            LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW
Sbjct: 121  LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180

Query: 199  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 258
            QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD
Sbjct: 181  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240

Query: 259  KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 318
            KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRG TSGQKRKAEQQP
Sbjct: 241  KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGLTSGQKRKAEQQP 300

Query: 319  VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 378
            VPVPQRNFR GGEFR FQQKPFEAGEAAR KPLCT CGKHHLGRCLFGTRTCFKCRQEGH
Sbjct: 301  VPVPQRNFRSGGEFRRFQQKPFEAGEAARWKPLCTICGKHHLGRCLFGTRTCFKCRQEGH 360

Query: 379  TADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGS 438
            TADRCPLRLTG AQNQGAGAPHQGRVFATN+TEAEKAGTVVTGTLPVLGHYALVLFD   
Sbjct: 361  TADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTGTLPVLGHYALVLFD--- 420

Query: 439  SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 498
                                    SVSTPSGECMLSKEKVK CQIEIAGHVIEVTL+VLD
Sbjct: 421  ------------------------SVSTPSGECMLSKEKVKTCQIEIAGHVIEVTLLVLD 480

Query: 499  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 558
            MLDFDVILGMDWLAA+HASIDCSRKEVTFNPPS ASFKFKGGGS+SLPQVISAIRASKLL
Sbjct: 481  MLDFDVILGMDWLAAHHASIDCSRKEVTFNPPSRASFKFKGGGSRSLPQVISAIRASKLL 540

Query: 559  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 618
            SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 541  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600

Query: 619  SRAPYRMAPAELKELK-------------------------------------------- 678
            SRAPYRMAPAELKELK                                            
Sbjct: 601  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 660

Query: 679  --------------------GATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 738
                                GATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV
Sbjct: 661  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 720

Query: 739  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 798
            MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK
Sbjct: 721  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 780

Query: 799  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 858
            LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 781  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 840

Query: 859  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSD 918
            RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSD
Sbjct: 841  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 900

Query: 919  ASKK--------QGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 978
            ASKK        QGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF
Sbjct: 901  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 960

Query: 979  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1038
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 961  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1020

Query: 1039 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTA 1098
            QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ  
Sbjct: 1021 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 1080

Query: 1099 EFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR-------- 1158
            EFSLSSDGGLLFERRLCVPSDS VKTELLSEAHSSPFSMHPGSTKMY+D+KR        
Sbjct: 1081 EFSLSSDGGLLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKMYRDVKRVYWWRNMK 1140

Query: 1159 ---------------VKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 1218
                           VKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV
Sbjct: 1141 REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 1200

Query: 1219 VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTA 1278
            VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK LQTA
Sbjct: 1201 VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKSLQTA 1260

Query: 1279 MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 1338
            MGTRLDFSTAFHPQTDGQTERLNQVLE MLRACALEFPGSWDSHLHLMEF YNNSYQATI
Sbjct: 1261 MGTRLDFSTAFHPQTDGQTERLNQVLEYMLRACALEFPGSWDSHLHLMEFVYNNSYQATI 1320

Query: 1339 GMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV 1398
            GMAPFEALYG+CCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV
Sbjct: 1321 GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV 1380

Query: 1399 RRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLS 1420
            RRKDLEFE+GDKVFLKVAPM+GVLRFERRGKLSPRF+GPFEILERIGPVAYRLALPPSLS
Sbjct: 1381 RRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFIGPFEILERIGPVAYRLALPPSLS 1440

[Close]
BLAST of IVF0011935 vs. ExPASy TrEMBL
Match: A0A5A7UAA8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00800 PE=4 SV=1)

HSP 1 Score: 2601.6 bits (6742), Expect = 0.0e+00
Identity = 1345/1496 (89.91%), Postives = 1350/1496 (90.24%), Query Frame = 0 

Query: 19   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 78
            MPPRRGARRGGRGGRGRGAGRVQPE                                   
Sbjct: 1    MPPRRGARRGGRGGRGRGAGRVQPE----------------------------------- 60

Query: 79   QQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 138
              KPASPTPAPAPAPAPAPVPAPAPA VPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 61   --KPASPTPAPAPAPAPAPVPAPAPALVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 120

Query: 139  LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 198
            LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW
Sbjct: 121  LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180

Query: 199  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 258
            QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD
Sbjct: 181  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240

Query: 259  KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 318
            KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQE ANSSKTAGRGSTSGQKRKAEQQP
Sbjct: 241  KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQEMANSSKTAGRGSTSGQKRKAEQQP 300

Query: 319  VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 378
            VPVPQRNFR GGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH
Sbjct: 301  VPVPQRNFRSGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360

Query: 379  TADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGS 438
            TADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGS
Sbjct: 361  TADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420

Query: 439  SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 498
            SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLS+EKVKACQIEIAGHVIEVTLIVLD
Sbjct: 421  SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSREKVKACQIEIAGHVIEVTLIVLD 480

Query: 499  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 558
            MLDFDVILGMDWLAANHASIDCSRK+VTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL
Sbjct: 481  MLDFDVILGMDWLAANHASIDCSRKDVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 540

Query: 559  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 618
            SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 541  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600

Query: 619  SRAPYRMAPAELKELK-------------------------------------------- 678
            SRAPYRMAPAELKELK                                            
Sbjct: 601  SRAPYRMAPAELKELKVQLQELLDKGFIRPNVSPWGAPVLFVKKKDGSMRLCIDYRELNK 660

Query: 679  --------------------GATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 738
                                GATVFSKIDLRSGY+QLRIKDEDVPKTAFRSRYGHYEFIV
Sbjct: 661  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYNQLRIKDEDVPKTAFRSRYGHYEFIV 720

Query: 739  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 798
            MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK
Sbjct: 721  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 780

Query: 799  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 858
            LYAKFSKCEFWLKQVSFLGHVVSKA VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 781  LYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 840

Query: 859  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSD 918
            RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSD
Sbjct: 841  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 900

Query: 919  ASKK--------QGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 978
            ASKK        QGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF
Sbjct: 901  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 960

Query: 979  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1038
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 961  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1020

Query: 1039 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTA 1098
            QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ  
Sbjct: 1021 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 1080

Query: 1099 EFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR-------- 1158
            EFSLSSDGGL FE RLCVPSDSAVKTELL EAHSSPFSMHPGSTKMYQDLKR        
Sbjct: 1081 EFSLSSDGGLSFEGRLCVPSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 1140

Query: 1159 ---------------VKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 1218
                           VK PRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV
Sbjct: 1141 REVAEFVSKCLVCQQVKEPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 1200

Query: 1219 VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTA 1278
            VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTA
Sbjct: 1201 VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTA 1260

Query: 1279 MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 1338
            MGTRLDFSTAFHPQ DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI
Sbjct: 1261 MGTRLDFSTAFHPQADGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 1320

Query: 1339 GMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV 1398
            GMAPFEALYG+CCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV
Sbjct: 1321 GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV 1380

Query: 1399 RRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLS 1420
            RRKDLEFEI DKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLS
Sbjct: 1381 RRKDLEFEIRDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLS 1440

[Close]
BLAST of IVF0011935 vs. ExPASy TrEMBL
Match: A0A5A7V223 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold3980G00010 PE=4 SV=1)

HSP 1 Score: 2553.9 bits (6618), Expect = 0.0e+00
Identity = 1310/1443 (90.78%), Postives = 1330/1443 (92.17%), Query Frame = 0 

Query: 10   QESLVVVREMPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRF 69
            + SL +VREMPPRRGARRGGRGGRGR  GRVQPEVQPVAQAPDPAAPVTHADLAAMEQRF
Sbjct: 166  KRSLPLVREMPPRRGARRGGRGGRGREVGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRF 225

Query: 70   RDMIMQMREQQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRK 129
            R++IMQMREQQKPASPTPAPAPAPAP P PAPAPAPVPVAPQFVPDQLSAEAKHLRD RK
Sbjct: 226  RELIMQMREQQKPASPTPAPAPAPAPVPAPAPAPAPVPVAPQFVPDQLSAEAKHLRDLRK 285

Query: 130  YNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERML 189
            YNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERML
Sbjct: 286  YNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERML 345

Query: 190  GGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEM 249
            GGD+SQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEM
Sbjct: 346  GGDMSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEM 405

Query: 250  IATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSG 309
            IATEAARADKFVRGLRLDIQGLVRAFRPATHADAL LAVDLSLQERANSSKTAGRGSTSG
Sbjct: 406  IATEAARADKFVRGLRLDIQGLVRAFRPATHADALCLAVDLSLQERANSSKTAGRGSTSG 465

Query: 310  QKRKAEQQPVPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRT 369
            QKRKAEQQPVPVPQRNFR GGEF  FQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRT
Sbjct: 466  QKRKAEQQPVPVPQRNFRSGGEFCRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRT 525

Query: 370  CFKCRQEGHTADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHY 429
            CFKCRQEGHTADRCPLRLTGIAQNQGAGAPHQGRVFATN+TEAEKA TVVTGTLPVLG+Y
Sbjct: 526  CFKCRQEGHTADRCPLRLTGIAQNQGAGAPHQGRVFATNKTEAEKASTVVTGTLPVLGYY 585

Query: 430  ALVLFDSGSSHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHV 489
            ALVLFDSGSSHSFISSAFV HARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHV
Sbjct: 586  ALVLFDSGSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHV 645

Query: 490  IEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVI 549
            IEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVI
Sbjct: 646  IEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVI 705

Query: 550  SAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAI 609
            SAI ASKLLSQGTWGILASVVDTRE DVSLSSEPVVRDYPDVFPEEL GLPPHRE     
Sbjct: 706  SAITASKLLSQGTWGILASVVDTRETDVSLSSEPVVRDYPDVFPEELSGLPPHREGFIRP 765

Query: 610  ELEPGTVPI-------------------------SRAPYRMAPAELKELKGATVFSKIDL 669
             + P   P+                         +R P         +L+GATVFSKIDL
Sbjct: 766  SVSPWGAPVLFVKKKDGSMRLCIDNRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDL 825

Query: 670  RSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV 729
            RSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
Sbjct: 826  RSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV 885

Query: 730  FIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVD 789
            FIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVD
Sbjct: 886  FIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVD 945

Query: 790  PAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACE 849
            PAKIEAVTGWTRPSTVSEVRSFLGL GYYRR                         KACE
Sbjct: 946  PAKIEAVTGWTRPSTVSEVRSFLGLTGYYRR-------------------------KACE 1005

Query: 850  DSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKK--------QGKVVAYASRQLKSHEQN 909
            DSFQ LKQKLVTAPVLTVP+GSGSFVIYSDASKK        QGKVVAYASRQLKSHEQN
Sbjct: 1006 DSFQNLKQKLVTAPVLTVPNGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQN 1065

Query: 910  YPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYD 969
            YPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYD
Sbjct: 1066 YPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYD 1125

Query: 970  CEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQ 1029
            CEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQ
Sbjct: 1126 CEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQ 1185

Query: 1030 PTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLS 1089
            PTLRQRIIDAQSNDPYLVEKRGLAEAGQ  EFSLSSDGGLLFERRLCVPSDSAVKTELLS
Sbjct: 1186 PTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLS 1245

Query: 1090 EAHSSPFSMHPGSTKMYQDLKRVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLR 1149
            EAHSSPFSMHP           VKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLR
Sbjct: 1246 EAHSSPFSMHP-----------VKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLR 1305

Query: 1150 GFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 1209
            GFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF
Sbjct: 1306 GFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 1365

Query: 1210 WKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN 1269
            WKGLQTAMGTRLDFSTAFHPQTDGQTER+NQVLEDMLRACALEFPGSWDSHLHLMEFAYN
Sbjct: 1366 WKGLQTAMGTRLDFSTAFHPQTDGQTERMNQVLEDMLRACALEFPGSWDSHLHLMEFAYN 1425

Query: 1270 NSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSR 1329
            NSYQATIGMAPFEALY +CCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSR
Sbjct: 1426 NSYQATIGMAPFEALYDKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSR 1485

Query: 1330 QKSYADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRL 1389
            QKSYADVRRKDLEFE+GD VFLKVAPM+GV+RFERRGKLSPRFVGPFEILERIGPVAYRL
Sbjct: 1486 QKSYADVRRKDLEFEVGDNVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRL 1545

Query: 1390 ALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNK 1420
            ALPPSLSTVHDVFHVSMLRKYVP+PSHVVDYEPLEIDENLSY EQPVEVLAREVKTLRNK
Sbjct: 1546 ALPPSLSTVHDVFHVSMLRKYVPNPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNK 1572

[Close]
BLAST of IVF0011935 vs. ExPASy TrEMBL
Match: A0A5A7U7V9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00950 PE=4 SV=1)

HSP 1 Score: 2545.4 bits (6596), Expect = 0.0e+00
Identity = 1322/1468 (90.05%), Postives = 1329/1468 (90.53%), Query Frame = 0 

Query: 19   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 78
            MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQA DPAAPVTH DLAAMEQRFRD+IMQMRE
Sbjct: 1    MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQASDPAAPVTHVDLAAMEQRFRDLIMQMRE 60

Query: 79   QQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 138
            QQKPASPTPAPAPAPAPAP PAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 61   QQKPASPTPAPAPAPAPAPAPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 120

Query: 139  LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 198
            LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERML GDVSQITW
Sbjct: 121  LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLSGDVSQITW 180

Query: 199  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 258
            QQFKESFYAKFFSASLRDAKRQEFLNLEQGD+TVEQYDAEFDMLSRFAPEMIATEAARAD
Sbjct: 181  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDVTVEQYDAEFDMLSRFAPEMIATEAARAD 240

Query: 259  KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 318
            KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
Sbjct: 241  KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300

Query: 319  VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 378
            VPVP+RNFR GGEFRSFQQKP   G    G                              
Sbjct: 301  VPVPKRNFRSGGEFRSFQQKPLRQGRLPGGS----------------------------- 360

Query: 379  TADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGS 438
             +DRCPLRLTG AQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGS
Sbjct: 361  RSDRCPLRLTGNAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420

Query: 439  SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 498
            SHSFISSAFV HARLEVEPLHHVLSVSTPSGEC+LS+EKVKACQIEIAGHVIEVTLIVLD
Sbjct: 421  SHSFISSAFVLHARLEVEPLHHVLSVSTPSGECLLSREKVKACQIEIAGHVIEVTLIVLD 480

Query: 499  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 558
            MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL
Sbjct: 481  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 540

Query: 559  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 618
            SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 541  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600

Query: 619  SRAPYRMAPAELKELK------------------------------------GATVFSKI 678
            SRAPYRMAPAELKELK                                    GA VFSK 
Sbjct: 601  SRAPYRMAPAELKELKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGAIVFSKF 660

Query: 679  DLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV 738
            DLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFR+FLDTFV
Sbjct: 661  DLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFRKFLDTFV 720

Query: 739  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVS 798
            IVFIDDILIYSKTEAEHEEHLRM                       VSFLGHVVSKAGVS
Sbjct: 721  IVFIDDILIYSKTEAEHEEHLRM-----------------------VSFLGHVVSKAGVS 780

Query: 799  VDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKA 858
            VDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKA
Sbjct: 781  VDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKA 840

Query: 859  CEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKK--------QGKVVAYASRQLKSHE 918
            CEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKK        QGKVVAYASRQLKSHE
Sbjct: 841  CEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHE 900

Query: 919  QNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKD 978
            QNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKD
Sbjct: 901  QNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKD 960

Query: 979  YDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT 1038
            YDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT
Sbjct: 961  YDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT 1020

Query: 1039 VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTEL 1098
            VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTEL
Sbjct: 1021 VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTEL 1080

Query: 1099 LSEAHSSPFSMHPGSTKMYQDLKR-----------------------VKAPRQKPAGLLQ 1158
            LSEAHSSPFSMHPGSTKMYQDLKR                       VKAPRQKPAGLLQ
Sbjct: 1081 LSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQ 1140

Query: 1159 PLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYM 1218
            PLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYM
Sbjct: 1141 PLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYM 1200

Query: 1219 SEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLED 1278
            SEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLED
Sbjct: 1201 SEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLED 1260

Query: 1279 MLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLM 1338
            MLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLM
Sbjct: 1261 MLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLM 1320

Query: 1339 GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMKGVLRFER 1398
            GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMKGVLRFER
Sbjct: 1321 GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMKGVLRFER 1380

Query: 1399 RGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLE 1420
            RGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLE
Sbjct: 1381 RGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLE 1416

[Close]
BLAST of IVF0011935 vs. NCBI nr
Match: KAA0066456.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2683 bits (6954), Expect = 0.0
Identity = 1371/1466 (93.52%), Postives = 1382/1466 (94.27%), Query Frame = 0 

Query: 19   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 78
            MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE
Sbjct: 1    MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 60

Query: 79   QQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 138
            QQKP SP PAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 61   QQKPVSPNPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 120

Query: 139  LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 198
            LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW
Sbjct: 121  LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180

Query: 199  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 258
            QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD
Sbjct: 181  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240

Query: 259  KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 318
            KFVRGLRLDIQGLVRAFRPATH DALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
Sbjct: 241  KFVRGLRLDIQGLVRAFRPATHVDALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300

Query: 319  VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 378
            VPVPQRNFR GGEFR FQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH
Sbjct: 301  VPVPQRNFRSGGEFRYFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360

Query: 379  TADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGS 438
            TADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGT+VTGTLPVLGHYALVLF SGS
Sbjct: 361  TADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTIVTGTLPVLGHYALVLFYSGS 420

Query: 439  SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 498
            SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD
Sbjct: 421  SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 480

Query: 499  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 558
            MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL
Sbjct: 481  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 540

Query: 559  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 618
            SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELE GTVPI
Sbjct: 541  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELESGTVPI 600

Query: 619  SRAPYRMAPAELKELK----------------------------------GATVFSKIDL 678
            SRAPYRMAPAELK+LK                                  GATVFSKIDL
Sbjct: 601  SRAPYRMAPAELKDLKVQLQELLDKGELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDL 660

Query: 679  RSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV 738
            RSGYHQLRIKDEDVPKT FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
Sbjct: 661  RSGYHQLRIKDEDVPKTTFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV 720

Query: 739  FIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVD 798
            FIDDILIYSKTEAEHEEHLRMVLQTLRD KLYAKFSKCEFWLKQVSFLGHVVSKAGVSVD
Sbjct: 721  FIDDILIYSKTEAEHEEHLRMVLQTLRDYKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVD 780

Query: 799  PAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACE 858
            PAKIEAVTGWTRPSTVSEVRSFLGL GYYRRFVENFSRIATPLTQLTRKG PFVWSKACE
Sbjct: 781  PAKIEAVTGWTRPSTVSEVRSFLGLVGYYRRFVENFSRIATPLTQLTRKGVPFVWSKACE 840

Query: 859  DSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKK--------QGKVVAYASRQLKSHEQN 918
            DSFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKK        QGKVVAYASRQLKSHEQN
Sbjct: 841  DSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQN 900

Query: 919  YPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYD 978
            YPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYD
Sbjct: 901  YPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYD 960

Query: 979  CEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQ 1038
            CEILYHPGKANVVADALSRKVSHS ALITRQAPLHRDLERAEIAVS+GAVTMQLA+L VQ
Sbjct: 961  CEILYHPGKANVVADALSRKVSHSVALITRQAPLHRDLERAEIAVSMGAVTMQLARLAVQ 1020

Query: 1039 PTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLS 1098
            PTLRQRIIDAQ NDPYLVEKRGL EAGQTAEFSLSSDGGLLFERRLCVPSDSAVK ELLS
Sbjct: 1021 PTLRQRIIDAQGNDPYLVEKRGLVEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKIELLS 1080

Query: 1099 EAHSSPFSMHPGSTKMYQDLKRV-----------------------KAPRQKPAGLLQPL 1158
            EAHSSPFSMHPGSTK+YQDLKRV                       KAPRQKPAGLLQPL
Sbjct: 1081 EAHSSPFSMHPGSTKIYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPL 1140

Query: 1159 SIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSE 1218
            SIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSE
Sbjct: 1141 SIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSE 1200

Query: 1219 IVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDML 1278
            IVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDML
Sbjct: 1201 IVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDML 1260

Query: 1279 RACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLMGP 1338
            RACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLMGP
Sbjct: 1261 RACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLMGP 1320

Query: 1339 ELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRG 1398
            ELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFE+GDKVFLKVAPM+GV+RFERRG
Sbjct: 1321 ELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRG 1380

Query: 1399 KLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEID 1419
            KLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEID
Sbjct: 1381 KLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEID 1440

[Close]
BLAST of IVF0011935 vs. NCBI nr
Match: KAA0048687.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2597 bits (6731), Expect = 0.0
Identity = 1341/1496 (89.64%), Postives = 1355/1496 (90.57%), Query Frame = 0 

Query: 19   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 78
            MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRD+IMQMRE
Sbjct: 1    MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE 60

Query: 79   QQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 138
            QQKPASPTPAPAPAPAPAP PAPA APVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 61   QQKPASPTPAPAPAPAPAPAPAPALAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 120

Query: 139  LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 198
            LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW
Sbjct: 121  LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180

Query: 199  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 258
            QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD
Sbjct: 181  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240

Query: 259  KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 318
            KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRG TSGQKRKAEQQP
Sbjct: 241  KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGLTSGQKRKAEQQP 300

Query: 319  VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 378
            VPVPQRNFR GGEFR FQQKPFEAGEAAR KPLCT CGKHHLGRCLFGTRTCFKCRQEGH
Sbjct: 301  VPVPQRNFRSGGEFRRFQQKPFEAGEAARWKPLCTICGKHHLGRCLFGTRTCFKCRQEGH 360

Query: 379  TADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGS 438
            TADRCPLRLTG AQNQGAGAPHQGRVFATN+TEAEKAGTVVTGTLPVLGHYALVLFDS  
Sbjct: 361  TADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTGTLPVLGHYALVLFDS-- 420

Query: 439  SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 498
                                     VSTPSGECMLSKEKVK CQIEIAGHVIEVTL+VLD
Sbjct: 421  -------------------------VSTPSGECMLSKEKVKTCQIEIAGHVIEVTLLVLD 480

Query: 499  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 558
            MLDFDVILGMDWLAA+HASIDCSRKEVTFNPPS ASFKFKGGGS+SLPQVISAIRASKLL
Sbjct: 481  MLDFDVILGMDWLAAHHASIDCSRKEVTFNPPSRASFKFKGGGSRSLPQVISAIRASKLL 540

Query: 559  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 618
            SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 541  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600

Query: 619  SRAPYRMAPAELKELK-------------------------------------------- 678
            SRAPYRMAPAELKELK                                            
Sbjct: 601  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 660

Query: 679  --------------------GATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 738
                                GATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV
Sbjct: 661  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 720

Query: 739  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 798
            MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK
Sbjct: 721  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 780

Query: 799  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 858
            LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 781  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 840

Query: 859  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSD 918
            RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSD
Sbjct: 841  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 900

Query: 919  ASKK--------QGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 978
            ASKK        QGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF
Sbjct: 901  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 960

Query: 979  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1038
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 961  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1020

Query: 1039 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTA 1098
            QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ  
Sbjct: 1021 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 1080

Query: 1099 EFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRV------- 1158
            EFSLSSDGGLLFERRLCVPSDS VKTELLSEAHSSPFSMHPGSTKMY+D+KRV       
Sbjct: 1081 EFSLSSDGGLLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKMYRDVKRVYWWRNMK 1140

Query: 1159 ----------------KAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 1218
                            KAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV
Sbjct: 1141 REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 1200

Query: 1219 VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTA 1278
            VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK LQTA
Sbjct: 1201 VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKSLQTA 1260

Query: 1279 MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 1338
            MGTRLDFSTAFHPQTDGQTERLNQVLE MLRACALEFPGSWDSHLHLMEF YNNSYQATI
Sbjct: 1261 MGTRLDFSTAFHPQTDGQTERLNQVLEYMLRACALEFPGSWDSHLHLMEFVYNNSYQATI 1320

Query: 1339 GMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV 1398
            GMAPFEALYG+CCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV
Sbjct: 1321 GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV 1380

Query: 1399 RRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLS 1419
            RRKDLEFE+GDKVFLKVAPM+GVLRFERRGKLSPRF+GPFEILERIGPVAYRLALPPSLS
Sbjct: 1381 RRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFIGPFEILERIGPVAYRLALPPSLS 1440

[Close]
BLAST of IVF0011935 vs. NCBI nr
Match: KAA0051357.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2592 bits (6718), Expect = 0.0
Identity = 1345/1496 (89.91%), Postives = 1350/1496 (90.24%), Query Frame = 0 

Query: 19   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 78
            MPPRRGARRGGRGGRGRGAGRVQPE                                   
Sbjct: 1    MPPRRGARRGGRGGRGRGAGRVQPE----------------------------------- 60

Query: 79   QQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 138
              KPASPTPAPAPAPAPAPVPAPAPA VPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 61   --KPASPTPAPAPAPAPAPVPAPAPALVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 120

Query: 139  LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 198
            LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW
Sbjct: 121  LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180

Query: 199  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 258
            QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD
Sbjct: 181  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240

Query: 259  KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 318
            KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQE ANSSKTAGRGSTSGQKRKAEQQP
Sbjct: 241  KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQEMANSSKTAGRGSTSGQKRKAEQQP 300

Query: 319  VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 378
            VPVPQRNFR GGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH
Sbjct: 301  VPVPQRNFRSGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360

Query: 379  TADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGS 438
            TADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGS
Sbjct: 361  TADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420

Query: 439  SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 498
            SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLS+EKVKACQIEIAGHVIEVTLIVLD
Sbjct: 421  SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSREKVKACQIEIAGHVIEVTLIVLD 480

Query: 499  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 558
            MLDFDVILGMDWLAANHASIDCSRK+VTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL
Sbjct: 481  MLDFDVILGMDWLAANHASIDCSRKDVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 540

Query: 559  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 618
            SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 541  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600

Query: 619  SRAPYRMAPAELKELK-------------------------------------------- 678
            SRAPYRMAPAELKELK                                            
Sbjct: 601  SRAPYRMAPAELKELKVQLQELLDKGFIRPNVSPWGAPVLFVKKKDGSMRLCIDYRELNK 660

Query: 679  --------------------GATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 738
                                GATVFSKIDLRSGY+QLRIKDEDVPKTAFRSRYGHYEFIV
Sbjct: 661  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYNQLRIKDEDVPKTAFRSRYGHYEFIV 720

Query: 739  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 798
            MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK
Sbjct: 721  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 780

Query: 799  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 858
            LYAKFSKCEFWLKQVSFLGHVVSKA VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 781  LYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 840

Query: 859  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSD 918
            RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSD
Sbjct: 841  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 900

Query: 919  ASKK--------QGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 978
            ASKK        QGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF
Sbjct: 901  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 960

Query: 979  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1038
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 961  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1020

Query: 1039 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTA 1098
            QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ  
Sbjct: 1021 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 1080

Query: 1099 EFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRV------- 1158
            EFSLSSDGGL FE RLCVPSDSAVKTELL EAHSSPFSMHPGSTKMYQDLKRV       
Sbjct: 1081 EFSLSSDGGLSFEGRLCVPSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 1140

Query: 1159 ----------------KAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 1218
                            K PRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV
Sbjct: 1141 REVAEFVSKCLVCQQVKEPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 1200

Query: 1219 VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTA 1278
            VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTA
Sbjct: 1201 VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTA 1260

Query: 1279 MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 1338
            MGTRLDFSTAFHPQ DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI
Sbjct: 1261 MGTRLDFSTAFHPQADGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 1320

Query: 1339 GMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV 1398
            GMAPFEALYG+CCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV
Sbjct: 1321 GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV 1380

Query: 1399 RRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLS 1419
            RRKDLEFEI DKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLS
Sbjct: 1381 RRKDLEFEIRDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLS 1440

[Close]
BLAST of IVF0011935 vs. NCBI nr
Match: KAA0061618.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 2545 bits (6597), Expect = 0.0
Identity = 1310/1443 (90.78%), Postives = 1330/1443 (92.17%), Query Frame = 0 

Query: 10   QESLVVVREMPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRF 69
            + SL +VREMPPRRGARRGGRGGRGR  GRVQPEVQPVAQAPDPAAPVTHADLAAMEQRF
Sbjct: 166  KRSLPLVREMPPRRGARRGGRGGRGREVGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRF 225

Query: 70   RDMIMQMREQQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRK 129
            R++IMQMREQQKPASPTPAPAPAPAP P PAPAPAPVPVAPQFVPDQLSAEAKHLRD RK
Sbjct: 226  RELIMQMREQQKPASPTPAPAPAPAPVPAPAPAPAPVPVAPQFVPDQLSAEAKHLRDLRK 285

Query: 130  YNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERML 189
            YNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERML
Sbjct: 286  YNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERML 345

Query: 190  GGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEM 249
            GGD+SQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEM
Sbjct: 346  GGDMSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEM 405

Query: 250  IATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSG 309
            IATEAARADKFVRGLRLDIQGLVRAFRPATHADAL LAVDLSLQERANSSKTAGRGSTSG
Sbjct: 406  IATEAARADKFVRGLRLDIQGLVRAFRPATHADALCLAVDLSLQERANSSKTAGRGSTSG 465

Query: 310  QKRKAEQQPVPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRT 369
            QKRKAEQQPVPVPQRNFR GGEF  FQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRT
Sbjct: 466  QKRKAEQQPVPVPQRNFRSGGEFCRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRT 525

Query: 370  CFKCRQEGHTADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHY 429
            CFKCRQEGHTADRCPLRLTGIAQNQGAGAPHQGRVFATN+TEAEKA TVVTGTLPVLG+Y
Sbjct: 526  CFKCRQEGHTADRCPLRLTGIAQNQGAGAPHQGRVFATNKTEAEKASTVVTGTLPVLGYY 585

Query: 430  ALVLFDSGSSHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHV 489
            ALVLFDSGSSHSFISSAFV HARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHV
Sbjct: 586  ALVLFDSGSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHV 645

Query: 490  IEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVI 549
            IEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVI
Sbjct: 646  IEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVI 705

Query: 550  SAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAI 609
            SAI ASKLLSQGTWGILASVVDTRE DVSLSSEPVVRDYPDVFPEEL GLPPHRE     
Sbjct: 706  SAITASKLLSQGTWGILASVVDTRETDVSLSSEPVVRDYPDVFPEELSGLPPHREGFIRP 765

Query: 610  ELEPGTVPI-------------------------SRAPYRMAPAELKELKGATVFSKIDL 669
             + P   P+                         +R P         +L+GATVFSKIDL
Sbjct: 766  SVSPWGAPVLFVKKKDGSMRLCIDNRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDL 825

Query: 670  RSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV 729
            RSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
Sbjct: 826  RSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV 885

Query: 730  FIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVD 789
            FIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVD
Sbjct: 886  FIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVD 945

Query: 790  PAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACE 849
            PAKIEAVTGWTRPSTVSEVRSFLGL GYYRR                         KACE
Sbjct: 946  PAKIEAVTGWTRPSTVSEVRSFLGLTGYYRR-------------------------KACE 1005

Query: 850  DSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKK--------QGKVVAYASRQLKSHEQN 909
            DSFQ LKQKLVTAPVLTVP+GSGSFVIYSDASKK        QGKVVAYASRQLKSHEQN
Sbjct: 1006 DSFQNLKQKLVTAPVLTVPNGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQN 1065

Query: 910  YPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYD 969
            YPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYD
Sbjct: 1066 YPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYD 1125

Query: 970  CEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQ 1029
            CEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQ
Sbjct: 1126 CEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQ 1185

Query: 1030 PTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLS 1089
            PTLRQRIIDAQSNDPYLVEKRGLAEAGQ  EFSLSSDGGLLFERRLCVPSDSAVKTELLS
Sbjct: 1186 PTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLS 1245

Query: 1090 EAHSSPFSMHPGSTKMYQDLKRVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLR 1149
            EAHSSPFSMHP           VKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLR
Sbjct: 1246 EAHSSPFSMHP-----------VKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLR 1305

Query: 1150 GFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 1209
            GFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF
Sbjct: 1306 GFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 1365

Query: 1210 WKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN 1269
            WKGLQTAMGTRLDFSTAFHPQTDGQTER+NQVLEDMLRACALEFPGSWDSHLHLMEFAYN
Sbjct: 1366 WKGLQTAMGTRLDFSTAFHPQTDGQTERMNQVLEDMLRACALEFPGSWDSHLHLMEFAYN 1425

Query: 1270 NSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSR 1329
            NSYQATIGMAPFEALY +CCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSR
Sbjct: 1426 NSYQATIGMAPFEALYDKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSR 1485

Query: 1330 QKSYADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRL 1389
            QKSYADVRRKDLEFE+GD VFLKVAPM+GV+RFERRGKLSPRFVGPFEILERIGPVAYRL
Sbjct: 1486 QKSYADVRRKDLEFEVGDNVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRL 1545

Query: 1390 ALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNK 1419
            ALPPSLSTVHDVFHVSMLRKYVP+PSHVVDYEPLEIDENLSY EQPVEVLAREVKTLRNK
Sbjct: 1546 ALPPSLSTVHDVFHVSMLRKYVPNPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNK 1572

[Close]
BLAST of IVF0011935 vs. NCBI nr
Match: KAA0051368.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2536 bits (6574), Expect = 0.0
Identity = 1322/1468 (90.05%), Postives = 1329/1468 (90.53%), Query Frame = 0 

Query: 19   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 78
            MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQA DPAAPVTH DLAAMEQRFRD+IMQMRE
Sbjct: 1    MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQASDPAAPVTHVDLAAMEQRFRDLIMQMRE 60

Query: 79   QQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 138
            QQKPASPTPAPAPAPAPAP PAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 61   QQKPASPTPAPAPAPAPAPAPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 120

Query: 139  LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 198
            LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERML GDVSQITW
Sbjct: 121  LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLSGDVSQITW 180

Query: 199  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 258
            QQFKESFYAKFFSASLRDAKRQEFLNLEQGD+TVEQYDAEFDMLSRFAPEMIATEAARAD
Sbjct: 181  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDVTVEQYDAEFDMLSRFAPEMIATEAARAD 240

Query: 259  KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 318
            KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
Sbjct: 241  KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300

Query: 319  VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 378
            VPVP+RNFR GGEFRSFQQKP   G                                 G 
Sbjct: 301  VPVPKRNFRSGGEFRSFQQKPLRQGRLP-----------------------------GGS 360

Query: 379  TADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGS 438
             +DRCPLRLTG AQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGS
Sbjct: 361  RSDRCPLRLTGNAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420

Query: 439  SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 498
            SHSFISSAFV HARLEVEPLHHVLSVSTPSGEC+LS+EKVKACQIEIAGHVIEVTLIVLD
Sbjct: 421  SHSFISSAFVLHARLEVEPLHHVLSVSTPSGECLLSREKVKACQIEIAGHVIEVTLIVLD 480

Query: 499  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 558
            MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL
Sbjct: 481  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 540

Query: 559  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 618
            SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 541  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600

Query: 619  SRAPYRMAPAELKELK------------------------------------GATVFSKI 678
            SRAPYRMAPAELKELK                                    GA VFSK 
Sbjct: 601  SRAPYRMAPAELKELKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGAIVFSKF 660

Query: 679  DLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV 738
            DLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFR+FLDTFV
Sbjct: 661  DLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFRKFLDTFV 720

Query: 739  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVS 798
            IVFIDDILIYSKTEAEHEEHLRMV                       SFLGHVVSKAGVS
Sbjct: 721  IVFIDDILIYSKTEAEHEEHLRMV-----------------------SFLGHVVSKAGVS 780

Query: 799  VDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKA 858
            VDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKA
Sbjct: 781  VDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKA 840

Query: 859  CEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKK--------QGKVVAYASRQLKSHE 918
            CEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKK        QGKVVAYASRQLKSHE
Sbjct: 841  CEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHE 900

Query: 919  QNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKD 978
            QNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKD
Sbjct: 901  QNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKD 960

Query: 979  YDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT 1038
            YDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT
Sbjct: 961  YDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT 1020

Query: 1039 VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTEL 1098
            VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTEL
Sbjct: 1021 VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTEL 1080

Query: 1099 LSEAHSSPFSMHPGSTKMYQDLKRV-----------------------KAPRQKPAGLLQ 1158
            LSEAHSSPFSMHPGSTKMYQDLKRV                       KAPRQKPAGLLQ
Sbjct: 1081 LSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQ 1140

Query: 1159 PLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYM 1218
            PLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYM
Sbjct: 1141 PLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYM 1200

Query: 1219 SEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLED 1278
            SEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLED
Sbjct: 1201 SEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLED 1260

Query: 1279 MLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLM 1338
            MLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLM
Sbjct: 1261 MLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLM 1320

Query: 1339 GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMKGVLRFER 1398
            GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMKGVLRFER
Sbjct: 1321 GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMKGVLRFER 1380

Query: 1399 RGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLE 1419
            RGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLE
Sbjct: 1381 RGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLE 1416

[Close]
BLAST of IVF0011935 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 122.5 bits (306), Expect = 2.8e-27
Identity = 60/131 (45.80%), Postives = 83/131 (63.36%), Query Frame = 0 

Query: 722 HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPST 781
           HL MVLQ    ++ YA   KC F   Q+++LG  H++S  GVS DPAK+EA+ GW  P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 782 VSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPV 841
            +E+R FLGL GYYRRFV+N+ +I  PLT+L +K +   W++    +F+ LK  + T PV
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTTLPV 122

Query: 842 LTVPDGSGSFV 851
           L +PD    FV
Sbjct: 123 LALPDLKLPFV 132

The following BLAST results are available for this feature:
BLAST of IVF0011935 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P0CT411.8e-11132.16Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... [more]
P0CT341.8e-11132.16Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
P0CT351.8e-11132.16Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
P0CT361.8e-11132.16Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
P0CT371.8e-11132.16Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
BLAST of IVF0011935 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7VJE20.0e+0093.52Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21... [more]
A0A5A7U3300.0e+0089.64Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43... [more]
A0A5A7UAA80.0e+0089.91Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55... [more]
A0A5A7V2230.0e+0090.78Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold39... [more]
A0A5A7U7V90.0e+0090.05Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55... [more]
BLAST of IVF0011935 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0066456.10.093.52pol protein [Cucumis melo var. makuwa][more]
KAA0048687.10.089.64pol protein [Cucumis melo var. makuwa][more]
KAA0051357.10.089.91pol protein [Cucumis melo var. makuwa][more]
KAA0061618.10.090.78ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0051368.10.090.05pol protein [Cucumis melo var. makuwa][more]
BLAST of IVF0011935 vs. TAIR 10
Match NameE-valueIdentityDescription
ATMG00860.12.8e-2745.80DNA/RNA polymerases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1090..1297
e-value: 2.2E-46
score: 159.7
IPR021109Aspartic peptidase domain superfamilyGENE3D2.40.70.10Acid Proteasescoord: 406..536
e-value: 5.1E-23
score: 83.3
IPR021109Aspartic peptidase domain superfamilySUPERFAMILY50630Acid proteasescoord: 423..519
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 589..755
e-value: 6.4E-25
score: 88.0
NoneNo IPR availableGENE3D3.10.20.370coord: 855..906
e-value: 2.0E-5
score: 26.5
NoneNo IPR availableGENE3D3.10.10.10HIV Type 1 Reverse Transcriptase, subunit A, domain 1coord: 649..681
e-value: 3.4E-50
score: 172.3
NoneNo IPR availablePFAMPF08284RVP_2coord: 401..529
e-value: 6.5E-43
score: 145.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 84..109
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..109
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 297..314
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 17..55
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 297..333
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 131..685
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 633..1177
NoneNo IPR availablePANTHERPTHR24559:SF383DNA/RNA POLYMERASES SUPERFAMILY PROTEINcoord: 633..1177
NoneNo IPR availablePANTHERPTHR24559:SF383DNA/RNA POLYMERASES SUPERFAMILY PROTEINcoord: 131..685
NoneNo IPR availableCDDcd09274RNase_HI_RT_Ty3coord: 850..957
e-value: 1.35198E-51
score: 175.374
NoneNo IPR availableCDDcd01647RT_LTRcoord: 630..756
e-value: 5.66356E-61
score: 204.366
NoneNo IPR availableCDDcd00303retropepsin_likecoord: 447..512
e-value: 2.02359E-12
score: 62.354
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 766..854
e-value: 1.7E-30
score: 106.8
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 630..756
e-value: 3.4E-50
score: 172.3
IPR005162Retrotransposon gag domainPFAMPF03732Retrotrans_gagcoord: 169..265
e-value: 3.5E-15
score: 56.1
IPR041373Reverse transcriptase, RNase H-like domainPFAMPF17917RT_RNaseHcoord: 850..935
e-value: 1.5E-27
score: 95.9
IPR001969Aspartic peptidase, active sitePROSITEPS00141ASP_PROTEASEcoord: 432..443
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 370..384
score: 9.438442
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 1092..1255
score: 18.918982
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 1093..1251
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 584..941

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0011935.1IVF0011935.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0006508 proteolysis
biological_process GO:0006278 RNA-dependent DNA biosynthetic process
molecular_function GO:0004190 aspartic-type endopeptidase activity
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003964 RNA-directed DNA polymerase activity
molecular_function GO:0008270 zinc ion binding