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IVF0011927 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCTTGGTGGATGCAGGACCTGGTGGGACCCCCATCATTTGTATGCAAGATGAGCCTACAGGAGTGCCAATCAACCGAGCCGCCAGGGTTGAGACCCACGTAGCGGTGGGATCCCTGGATCTAGTGGCCGGTGAATCACTGATCAAAGAGCCAATTTTGGAGAGATTCTTCATCGATCTAGTGGCCGGCGAATCACTGATCAAAGAGCGAGCTGCCGCCAGGTTGAATGATTATTTGGTGGGATCCACAGATGTAGTGGCTGGTGAACCCCTTTTTCTTCTTCCACGAAGATTCAGACAAAACCGAGCTTGGATGGAACTGAACAAGATTTGGCAAAGGAATCAAAAAGTCAAAGGCTTGATTATTGAGAAAGTCAAAGGAGGTTATTCAGTAGCCATCGCGGGTTTCATTACTTTTCTTCCATTCTGTCCTCTCATAAGGCAAAGGATATCGAATGATCGATTCAGCATTCAGAGCATTCACCCCAAAAGAACGAATATTGTGGTGAAAAAAGAAACTTTGCCTGACCTATGA ATGTTCTTGGTGGATGCAGGACCTGGTGGGACCCCCATCATTTGTATGCAAGATGAGCCTACAGGAGTGCCAATCAACCGAGCCGCCAGGGTTGAGACCCACGTAGCGGTGGGATCCCTGGATCTAGTGGCCGGTGAATCACTGATCAAAGAGCCAATTTTGGAGAGATTCTTCATCGATCTAGTGGCCGGCGAATCACTGATCAAAGAGCGAGCTGCCGCCAGGTTGAATGATTATTTGGTGGGATCCACAGATGTAGTGGCTGGTGAACCCCTTTTTCTTCTTCCACGAAGATTCAGACAAAACCGAGCTTGGATGGAACTGAACAAGATTTGGCAAAGGAATCAAAAAGTCAAAGGCTTGATTATTGAGAAAGTCAAAGGAGGTTATTCAGTAGCCATCGCGGGTTTCATTACTTTTCTTCCATTCTGTCCTCTCATAAGGCAAAGGATATCGAATGATCGATTCAGCATTCAGAGCATTCACCCCAAAAGAACGAATATTGTGGTGAAAAAAGAAACTTTGCCTGACCTATGA ATGTTCTTGGTGGATGCAGGACCTGGTGGGACCCCCATCATTTGTATGCAAGATGAGCCTACAGGAGTGCCAATCAACCGAGCCGCCAGGGTTGAGACCCACGTAGCGGTGGGATCCCTGGATCTAGTGGCCGGTGAATCACTGATCAAAGAGCCAATTTTGGAGAGATTCTTCATCGATCTAGTGGCCGGCGAATCACTGATCAAAGAGCGAGCTGCCGCCAGGTTGAATGATTATTTGGTGGGATCCACAGATGTAGTGGCTGGTGAACCCCTTTTTCTTCTTCCACGAAGATTCAGACAAAACCGAGCTTGGATGGAACTGAACAAGATTTGGCAAAGGAATCAAAAAGTCAAAGGCTTGATTATTGAGAAAGTCAAAGGAGGTTATTCAGTAGCCATCGCGGGTTTCATTACTTTTCTTCCATTCTGTCCTCTCATAAGGCAAAGGATATCGAATGATCGATTCAGCATTCAGAGCATTCACCCCAAAAGAACGAATATTGTGGTGAAAAAAGAAACTTTGCCTGACCTATGA MFLVDAGPGGTPIICMQDEPTGVPINRAARVETHVAVGSLDLVAGESLIKEPILERFFIDLVAGESLIKERAAARLNDYLVGSTDVVAGEPLFLLPRRFRQNRAWMELNKIWQRNQKVKGLIIEKVKGGYSVAIAGFITFLPFCPLIRQRISNDRFSIQSIHPKRTNIVVKKETLPDL Homology
BLAST of IVF0011927 vs. ExPASy Swiss-Prot
Match: P26863 (Ribosomal protein S1, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPS1 PE=3 SV=2) HSP 1 Score: 76.3 bits (186), Expect = 4.0e-13 Identity = 46/100 (46.00%), Postives = 64/100 (64.00%), Query Frame = 0
BLAST of IVF0011927 vs. ExPASy Swiss-Prot
Match: Q6NDP1 (30S ribosomal protein S1 OS=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) OX=258594 GN=rpsA PE=1 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 1.8e-05 Identity = 29/87 (33.33%), Postives = 47/87 (54.02%), Query Frame = 0
BLAST of IVF0011927 vs. ExPASy Swiss-Prot
Match: Q83E09 (30S ribosomal protein S1 OS=Coxiella burnetii (strain RSA 493 / Nine Mile phase I) OX=227377 GN=rpsA PE=1 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 1.2e-04 Identity = 28/84 (33.33%), Postives = 45/84 (53.57%), Query Frame = 0
BLAST of IVF0011927 vs. ExPASy Swiss-Prot
Match: P37985 (30S ribosomal protein S1 OS=Dickeya dadantii (strain 3937) OX=198628 GN=rpsA PE=3 SV=2) HSP 1 Score: 45.4 bits (106), Expect = 7.6e-04 Identity = 30/96 (31.25%), Postives = 48/96 (50.00%), Query Frame = 0
BLAST of IVF0011927 vs. ExPASy Swiss-Prot
Match: Q48082 (30S ribosomal protein S1 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=rpsA PE=3 SV=1) HSP 1 Score: 45.1 bits (105), Expect = 9.9e-04 Identity = 26/84 (30.95%), Postives = 43/84 (51.19%), Query Frame = 0
BLAST of IVF0011927 vs. ExPASy TrEMBL
Match: A0A5A7V9I0 (Ribosomal protein S1 (Mitochondrion) OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold79763G00010 PE=4 SV=1) HSP 1 Score: 357.1 bits (915), Expect = 4.4e-95 Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0
BLAST of IVF0011927 vs. ExPASy TrEMBL
Match: G3EU09 (Ribosomal protein S1 OS=Cucumis melo subsp. melo OX=412675 GN=rps1 PE=4 SV=1) HSP 1 Score: 357.1 bits (915), Expect = 4.4e-95 Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0
BLAST of IVF0011927 vs. ExPASy TrEMBL
Match: A0A3S9JIJ3 (Ribosomal protein S1 OS=Cucumis melo var. momordica OX=2034244 GN=rps1 PE=4 SV=1) HSP 1 Score: 357.1 bits (915), Expect = 4.4e-95 Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0
BLAST of IVF0011927 vs. ExPASy TrEMBL
Match: G3EIZ9 (Ribosomal protein S1 OS=Cucumis sativus OX=3659 GN=rps1 PE=4 SV=1) HSP 1 Score: 305.4 bits (781), Expect = 1.5e-79 Identity = 156/171 (91.23%), Postives = 163/171 (95.32%), Query Frame = 0
BLAST of IVF0011927 vs. ExPASy TrEMBL
Match: A0A6J1IHY3 (uncharacterized protein LOC111473236 OS=Cucurbita maxima OX=3661 GN=LOC111473236 PE=4 SV=1) HSP 1 Score: 285.8 bits (730), Expect = 1.2e-73 Identity = 151/170 (88.82%), Postives = 155/170 (91.18%), Query Frame = 0
BLAST of IVF0011927 vs. NCBI nr
Match: AEN56125.1 (ribosomal protein S1 [Cucumis melo subsp. melo] >AZP40294.1 ribosomal protein S1 [Cucumis melo var. momordica] >KAA0062525.1 ribosomal protein S1 [Cucumis melo var. makuwa] >TYK19210.1 ribosomal protein S1 [Cucumis melo var. makuwa]) HSP 1 Score: 356 bits (914), Expect = 5.84e-124 Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0
BLAST of IVF0011927 vs. NCBI nr
Match: YP_004849347.1 (ribosomal protein S1 [Cucumis sativus] >ADZ10774.1 ribosomal protein S1 [Cucumis sativus]) HSP 1 Score: 305 bits (780), Expect = 1.23e-103 Identity = 156/171 (91.23%), Postives = 163/171 (95.32%), Query Frame = 0
BLAST of IVF0011927 vs. NCBI nr
Match: XP_022974554.1 (uncharacterized protein LOC111473236 [Cucurbita maxima]) HSP 1 Score: 285 bits (730), Expect = 1.49e-95 Identity = 151/170 (88.82%), Postives = 155/170 (91.18%), Query Frame = 0
BLAST of IVF0011927 vs. NCBI nr
Match: YP_009706796.1 (ribosomal protein S1 [Ilex pubescens] >QEP49792.1 ribosomal protein S1 [Ilex pubescens]) HSP 1 Score: 280 bits (716), Expect = 2.02e-93 Identity = 149/170 (87.65%), Postives = 153/170 (90.00%), Query Frame = 0
BLAST of IVF0011927 vs. NCBI nr
Match: YP_003587379.2 (ribosomal protein S1 [Cucurbita pepo] >ACV96689.2 ribosomal protein S1 [Cucurbita pepo]) HSP 1 Score: 279 bits (713), Expect = 5.59e-93 Identity = 148/170 (87.06%), Postives = 153/170 (90.00%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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