IVF0011891 (gene) Melon (IVF77) v1

Overview


Name	IVF0011891
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Unknown protein
Location	chr02: 12587520 .. 12587846 (+)
RNA-Seq Expression	IVF0011891
Synteny	IVF0011891

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCCCAGTCGCTTAACGTATCCGCAATGAAGCTCGTGCTTGTATTTCTTGTCTGCATAGCCATTTTAGCGCCATCGACCACGATGGCCGACACAACAGCTGCAGCACCTAGTCCATCAGTACCACAAAACTTCCCTTTTCTAAAATGTGCTCCTTTTATTTTAGAAGCAACGTTGTGTGTGACAGATGTTATCAAGTTTCCGATTGCACCTCATCCGTCTTGTTGCAAAGCCATTTCTAAGCTTAACGATTGTGCCCCCGAAATTTATCAAAAGATTCCTTCTCCTGACATGGATGTGATTAAGAAGATTTGTAGTTTGTAA

mRNA sequence

ATGGCAGCCCAGTCGCTTAACGTATCCGCAATGAAGCTCGTGCTTGTATTTCTTGTCTGCATAGCCATTTTAGCGCCATCGACCACGATGGCCGACACAACAGCTGCAGCACCTAGTCCATCAGTACCACAAAACTTCCCTTTTCTAAAATGTGCTCCTTTTATTTTAGAAGCAACGTTGTGTGTGACAGATGTTATCAAGTTTCCGATTGCACCTCATCCGTCTTGTTGCAAAGCCATTTCTAAGCTTAACGATTGTGCCCCCGAAATTTATCAAAAGATTCCTTCTCCTGACATGGATGTGATTAAGAAGATTTGTAGTTTGTAA

Coding sequence (CDS)

ATGGCAGCCCAGTCGCTTAACGTATCCGCAATGAAGCTCGTGCTTGTATTTCTTGTCTGCATAGCCATTTTAGCGCCATCGACCACGATGGCCGACACAACAGCTGCAGCACCTAGTCCATCAGTACCACAAAACTTCCCTTTTCTAAAATGTGCTCCTTTTATTTTAGAAGCAACGTTGTGTGTGACAGATGTTATCAAGTTTCCGATTGCACCTCATCCGTCTTGTTGCAAAGCCATTTCTAAGCTTAACGATTGTGCCCCCGAAATTTATCAAAAGATTCCTTCTCCTGACATGGATGTGATTAAGAAGATTTGTAGTTTGTAA

Protein sequence

MAAQSLNVSAMKLVLVFLVCIAILAPSTTMADTTAAAPSPSVPQNFPFLKCAPFILEATLCVTDVIKFPIAPHPSCCKAISKLNDCAPEIYQKIPSPDMDVIKKICSL

Homology

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BLAST of IVF0011891 vs. ExPASy TrEMBL
Match: A0A5A7U9A1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00160 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 6.2e-52
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MAAQSLNVSAMKLVLVFLVCIAILAPSTTMADTTAAAPSPSVPQNFPFLKCAPFILEATL 60
           MAAQSLNVSAMKLVLVFLVCIAILAPSTTMADTTAAAPSPSVPQNFPFLKCAPFILEATL
Sbjct: 1   MAAQSLNVSAMKLVLVFLVCIAILAPSTTMADTTAAAPSPSVPQNFPFLKCAPFILEATL 60

Query: 61  CVTDVIKFPIAPHPSCCKAISKLNDCAPEIYQKIPSPDMDVIKKICSL 109
           CVTDVIKFPIAPHPSCCKAISKLNDCAPEIYQKIPSPDMDVIKKICSL
Sbjct: 61  CVTDVIKFPIAPHPSCCKAISKLNDCAPEIYQKIPSPDMDVIKKICSL 108

[Close]

BLAST of IVF0011891 vs. ExPASy TrEMBL
Match: A0A5D3CGK9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00080 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 2.0e-42
Identity = 91/98 (92.86%), Postives = 93/98 (94.90%), Query Frame = 0


Query: 11  MKLVLVFLVCIAILAPSTTMADTTAAAPSPSVPQNFPFLKCAPFILEATLCVTDVIKFPI 70
           MKLVLVFLVCIAILAPSTTMA TTAAAPSPSVPQNFPFLKCAPFILEATLCVT VIKFPI
Sbjct: 1   MKLVLVFLVCIAILAPSTTMAGTTAAAPSPSVPQNFPFLKCAPFILEATLCVTGVIKFPI 60

Query: 71  APHPSCCKAISKLNDCAPEIYQKIPSPDMDVIKKICSL 109
           APHPSCCKAISKL DCAP+IYQKIPS DM+VIKK CSL
Sbjct: 61  APHPSCCKAISKLKDCAPDIYQKIPSSDMNVIKKTCSL 98

[Close]

BLAST of IVF0011891 vs. ExPASy TrEMBL
Match: A0A5D3CGL7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00200 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 4.8e-28
Identity = 74/110 (67.27%), Postives = 83/110 (75.45%), Query Frame = 0


Query: 2   AAQSLNVSAMKLVLVFLVCIAILAPSTTMADTTAAAPSP---SVPQNFPFLKCAPFILEA 61
           AA+S + S ++L LVFLVCI ILAPS T A T A APSP    + Q+  F  CAPFILEA
Sbjct: 3   AAKSTSASTIRLALVFLVCIVILAPSVT-AHTMAEAPSPLLVLLDQDSSFSNCAPFILEA 62

Query: 62  TLCVTDVIKFPIAPHPSCCKAISKLNDCAPEIYQKIPSPDMDVIKKICSL 109
           T+C+ DVIK P+APHPSCCKAIS LNDCAPEIYQ IP   MDVIKKIC L
Sbjct: 63  TMCMVDVIKLPVAPHPSCCKAISDLNDCAPEIYQHIPG--MDVIKKICGL 109

[Close]

BLAST of IVF0011891 vs. ExPASy TrEMBL
Match: A0A5A7U4A7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00450 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.8e-27
Identity = 73/110 (66.36%), Postives = 82/110 (74.55%), Query Frame = 0


Query: 2   AAQSLNVSAMKLVLVFLVCIAILAPSTTMADTTAAAPSP---SVPQNFPFLKCAPFILEA 61
           AA+S + S ++L LVFLVCI ILAPS T A T A APSP    + Q+  F  CAPFILEA
Sbjct: 3   AAKSTSASTIRLALVFLVCIVILAPSVT-AHTMAEAPSPLLVLLDQDSSFSNCAPFILEA 62

Query: 62  TLCVTDVIKFPIAPHPSCCKAISKLNDCAPEIYQKIPSPDMDVIKKICSL 109
           T+C+ DVIK P+APHPSCCKAIS LNDCAPEIY  IP   MDVIKKIC L
Sbjct: 63  TMCMVDVIKLPVAPHPSCCKAISDLNDCAPEIYHHIPG--MDVIKKICGL 109

[Close]

BLAST of IVF0011891 vs. ExPASy TrEMBL
Match: A0A5A7U475 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00490 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 2.6e-26
Identity = 67/105 (63.81%), Postives = 79/105 (75.24%), Query Frame = 0


Query: 4   QSLNVSAMKLVLVFLVCIAILAPSTTMADTTAAAPSPSVPQNFPFLKCAPFILEATLCVT 63
           + ++   MK+ L FLV +AILAPS T A T AAAPSP   ++  F  C PFIL+AT+CV 
Sbjct: 5   RGMSTFIMKISLTFLVGMAILAPSAT-ATTVAAAPSPLALEDLSFSNCTPFILDATMCVV 64

Query: 64  DVIKFPIAPHPSCCKAISKLNDCAPEIYQKIPSPDMDVIKKICSL 109
            VIKFP+APHPSCCKAIS LNDC+PE+YQ IP   MDVIKKICSL
Sbjct: 65  SVIKFPVAPHPSCCKAISDLNDCSPEVYQHIPG--MDVIKKICSL 106

[Close]

BLAST of IVF0011891 vs. NCBI nr
Match: KAA0050069.1 (hypothetical protein E6C27_scaffold675G00500 [Cucumis melo var. makuwa] >TYK10341.1 hypothetical protein E5676_scaffold367G00160 [Cucumis melo var. makuwa])

HSP 1 Score: 214 bits (544), Expect = 8.31e-70
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MAAQSLNVSAMKLVLVFLVCIAILAPSTTMADTTAAAPSPSVPQNFPFLKCAPFILEATL 60
           MAAQSLNVSAMKLVLVFLVCIAILAPSTTMADTTAAAPSPSVPQNFPFLKCAPFILEATL
Sbjct: 1   MAAQSLNVSAMKLVLVFLVCIAILAPSTTMADTTAAAPSPSVPQNFPFLKCAPFILEATL 60

Query: 61  CVTDVIKFPIAPHPSCCKAISKLNDCAPEIYQKIPSPDMDVIKKICSL 108
           CVTDVIKFPIAPHPSCCKAISKLNDCAPEIYQKIPSPDMDVIKKICSL
Sbjct: 61  CVTDVIKFPIAPHPSCCKAISKLNDCAPEIYQKIPSPDMDVIKKICSL 108

[Close]

BLAST of IVF0011891 vs. NCBI nr
Match: TYK10334.1 (hypothetical protein E5676_scaffold367G00080 [Cucumis melo var. makuwa])

HSP 1 Score: 182 bits (461), Expect = 2.78e-57
Identity = 91/98 (92.86%), Postives = 93/98 (94.90%), Query Frame = 0


Query: 11  MKLVLVFLVCIAILAPSTTMADTTAAAPSPSVPQNFPFLKCAPFILEATLCVTDVIKFPI 70
           MKLVLVFLVCIAILAPSTTMA TTAAAPSPSVPQNFPFLKCAPFILEATLCVT VIKFPI
Sbjct: 1   MKLVLVFLVCIAILAPSTTMAGTTAAAPSPSVPQNFPFLKCAPFILEATLCVTGVIKFPI 60

Query: 71  APHPSCCKAISKLNDCAPEIYQKIPSPDMDVIKKICSL 108
           APHPSCCKAISKL DCAP+IYQKIPS DM+VIKK CSL
Sbjct: 61  APHPSCCKAISKLKDCAPDIYQKIPSSDMNVIKKTCSL 98

[Close]

BLAST of IVF0011891 vs. NCBI nr
Match: TYK10344.1 (hypothetical protein E5676_scaffold367G00200 [Cucumis melo var. makuwa])

HSP 1 Score: 134 bits (337), Expect = 3.10e-38
Identity = 74/110 (67.27%), Postives = 83/110 (75.45%), Query Frame = 0


Query: 2   AAQSLNVSAMKLVLVFLVCIAILAPSTTMADTTAAAPSPSV---PQNFPFLKCAPFILEA 61
           AA+S + S ++L LVFLVCI ILAPS T A T A APSP +    Q+  F  CAPFILEA
Sbjct: 3   AAKSTSASTIRLALVFLVCIVILAPSVT-AHTMAEAPSPLLVLLDQDSSFSNCAPFILEA 62

Query: 62  TLCVTDVIKFPIAPHPSCCKAISKLNDCAPEIYQKIPSPDMDVIKKICSL 108
           T+C+ DVIK P+APHPSCCKAIS LNDCAPEIYQ IP   MDVIKKIC L
Sbjct: 63  TMCMVDVIKLPVAPHPSCCKAISDLNDCAPEIYQHIPG--MDVIKKICGL 109

[Close]

BLAST of IVF0011891 vs. NCBI nr
Match: KAA0050064.1 (hypothetical protein E6C27_scaffold675G00450 [Cucumis melo var. makuwa])

HSP 1 Score: 132 bits (332), Expect = 1.79e-37
Identity = 73/110 (66.36%), Postives = 82/110 (74.55%), Query Frame = 0


Query: 2   AAQSLNVSAMKLVLVFLVCIAILAPSTTMADTTAAAPSPSV---PQNFPFLKCAPFILEA 61
           AA+S + S ++L LVFLVCI ILAPS T A T A APSP +    Q+  F  CAPFILEA
Sbjct: 3   AAKSTSASTIRLALVFLVCIVILAPSVT-AHTMAEAPSPLLVLLDQDSSFSNCAPFILEA 62

Query: 62  TLCVTDVIKFPIAPHPSCCKAISKLNDCAPEIYQKIPSPDMDVIKKICSL 108
           T+C+ DVIK P+APHPSCCKAIS LNDCAPEIY  IP   MDVIKKIC L
Sbjct: 63  TMCMVDVIKLPVAPHPSCCKAISDLNDCAPEIYHHIPG--MDVIKKICGL 109

[Close]

BLAST of IVF0011891 vs. NCBI nr
Match: KAE8653023.1 (hypothetical protein Csa_023561, partial [Cucumis sativus])

HSP 1 Score: 129 bits (324), Expect = 2.78e-36
Identity = 65/107 (60.75%), Postives = 78/107 (72.90%), Query Frame = 0


Query: 4   QSLNVSAMKLVLVFLVCIAILAPSTTMADTTAAAPS--PSVPQNFPFLKCAPFILEATLC 63
           +SL  S MKL LVF+V IAILA S T   T  ++ +  PS+ Q+  F  C PFIL+ATLC
Sbjct: 1   KSLKASPMKLALVFIVSIAILAASATAGRTVVSSTTLDPSISQDLSFFSCTPFILDATLC 60

Query: 64  VTDVIKFPIAPHPSCCKAISKLNDCAPEIYQKIPSPDMDVIKKICSL 108
           + DV KFPIAPHP CCKAI KLNDCAP ++Q IPS DMDV+K IC+L
Sbjct: 61  LVDVFKFPIAPHPFCCKAIFKLNDCAPVVFQTIPSADMDVVKNICAL 107

The following BLAST results are available for this feature:

BLAST of IVF0011891 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0011891 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U9A1	6.2e-52	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3CGK9	2.0e-42	92.86	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3CGL7	4.8e-28	67.27	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7U4A7	1.8e-27	66.36	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7U475	2.6e-26	63.81	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of IVF0011891 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0050069.1	8.31e-70	100.00	hypothetical protein E6C27_scaffold675G00500 [Cucumis melo var. makuwa] >TYK1034...	[more]
TYK10334.1	2.78e-57	92.86	hypothetical protein E5676_scaffold367G00080 [Cucumis melo var. makuwa]	[more]
TYK10344.1	3.10e-38	67.27	hypothetical protein E5676_scaffold367G00200 [Cucumis melo var. makuwa]	[more]
KAA0050064.1	1.79e-37	66.36	hypothetical protein E6C27_scaffold675G00450 [Cucumis melo var. makuwa]	[more]
KAE8653023.1	2.78e-36	60.75	hypothetical protein Csa_023561, partial [Cucumis sativus]	[more]

BLAST of IVF0011891 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0011891.1	IVF0011891.1	mRNA