IVF0011858 (gene) Melon (IVF77) v1

Overview


Name	IVF0011858
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	LOB domain-containing protein
Location	chr04: 13804535 .. 13805901 (+)
RNA-Seq Expression	IVF0011858
Synteny	IVF0011858

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTTCATGTGTTTATAAAGTGCAATAATCATAATATGAATCCCTTAAACTGAAAACTGAAAACCAAAAAGATCAGAAACAACAATGACGGGGTCTGGTTCTCCTTGCGGAGCTTGCAAATTCTTGAGAAGAAAATGTGTAAGGGGATGTGTTTTTGCACCATATTTTTGCCATGAACAAGGTGCTACTCATTTTGCTGCCATTCATAAAGTGTTTGGAGCAAGTAATGTTTCTAAGCTTCTTGCTCGTCTTCCTATTACTGAAAGATGTGAGGCTGCTGTTACTATTTCTTATGAAGCTCAAGCTAGGCTTCAAGATCCTATTTATGGCTGTGTTTCTCATATCTTCGCCCTCCAACAACAGGTTCATTATATTCATCCATCTTAATTAATTCATTCATTCCCAGCTTCTTTTTCTGTTTTTCGATACCTTATTTTCTAATTAATGGCTCAATTCAAACAATATTAATTCGTGTTTCATCACGGTTTTAACAAAAGTTTCCTGCTTTCTTAATTGCAATTTCTTTGTTATGGGGTATTTTTTATTAAAGAATAAAATTATATATTTGATTTGTAAATCCACTTCCTCAATAATGGGTTTCTTAGATTTTGAAAAAACAAATGTAACGAAAGAAGGAAATTTCACACACACGCAGACATATATATGGGTAGGAGTGTAGTGTGTTTATTAAAAGGTAAAATTTTAAAAATCAAATGTTTATTAAATACAGGTTAAGAAAAGAAAAATTATGTTTTAATGTTGAATATTAGTTATTGAAACCCTAATTCAGCTTTATGTTGTTTGTTTATTGAGTTTTTGGGAGGATAGCTGACTGATGTGTTTATTTTCAGACATATGATAAGATTGAATTTACCATAACTCATTAGCTTAAATTTTTGTTATTTGTTTTTCCAGGTTGTGAGTCTTCAGGCACAACTTGCTTCTTTGAAGGAACAAGCAGCGGAAAGCATTATGAACGCGTCCAGTAACGTGGGCGGGGTGAATGAGAAGATCAATAGTAGAAAGGTTCCTTCTCATCCCCAAGATCTTCATAGTTGGTTTCAGTCGGAGCAACCAAATGTAACACTTGAGTTCAACCCAAACCCGACTCCGAATAATAATTGTGCATCAAACACTAATTATTATGATGAGAATTATCGCATTATGGTGAATTCACAATCCAATGGGAACTATGAGAATCATCACATTGCAAAAATGGAGGAAAGTGGATCATATGGAAGCTTTGAAGAAACCTCAGGGTATTCGATGTATACTCTCGATCAATTGCATTCAAATGTTCAACAATGGAGCTTCAGTGATTCAGCTGATGATTTACAATCAGTTGCTTTTGGCAATAGACATTGGTGA

mRNA sequence

CCTTCATGTGTTTATAAAGTGCAATAATCATAATATGAATCCCTTAAACTGAAAACTGAAAACCAAAAAGATCAGAAACAACAATGACGGGGTCTGGTTCTCCTTGCGGAGCTTGCAAATTCTTGAGAAGAAAATGTGTAAGGGGATGTGTTTTTGCACCATATTTTTGCCATGAACAAGGTGCTACTCATTTTGCTGCCATTCATAAAGTGTTTGGAGCAAGTAATGTTTCTAAGCTTCTTGCTCGTCTTCCTATTACTGAAAGATGTGAGGCTGCTGTTACTATTTCTTATGAAGCTCAAGCTAGGCTTCAAGATCCTATTTATGGCTGTGTTTCTCATATCTTCGCCCTCCAACAACAGGTTGTGAGTCTTCAGGCACAACTTGCTTCTTTGAAGGAACAAGCAGCGGAAAGCATTATGAACGCGTCCAGTAACGTGGGCGGGGTGAATGAGAAGATCAATAGTAGAAAGGTTCCTTCTCATCCCCAAGATCTTCATAGTTGGTTTCAGTCGGAGCAACCAAATGTAACACTTGAGTTCAACCCAAACCCGACTCCGAATAATAATTGTGCATCAAACACTAATTATTATGATGAGAATTATCGCATTATGGTGAATTCACAATCCAATGGGAACTATGAGAATCATCACATTGCAAAAATGGAGGAAAGTGGATCATATGGAAGCTTTGAAGAAACCTCAGGGTATTCGATGTATACTCTCGATCAATTGCATTCAAATGTTCAACAATGGAGCTTCAGTGATTCAGCTGATGATTTACAATCAGTTGCTTTTGGCAATAGACATTGGTGA

Coding sequence (CDS)

ATGACGGGGTCTGGTTCTCCTTGCGGAGCTTGCAAATTCTTGAGAAGAAAATGTGTAAGGGGATGTGTTTTTGCACCATATTTTTGCCATGAACAAGGTGCTACTCATTTTGCTGCCATTCATAAAGTGTTTGGAGCAAGTAATGTTTCTAAGCTTCTTGCTCGTCTTCCTATTACTGAAAGATGTGAGGCTGCTGTTACTATTTCTTATGAAGCTCAAGCTAGGCTTCAAGATCCTATTTATGGCTGTGTTTCTCATATCTTCGCCCTCCAACAACAGGTTGTGAGTCTTCAGGCACAACTTGCTTCTTTGAAGGAACAAGCAGCGGAAAGCATTATGAACGCGTCCAGTAACGTGGGCGGGGTGAATGAGAAGATCAATAGTAGAAAGGTTCCTTCTCATCCCCAAGATCTTCATAGTTGGTTTCAGTCGGAGCAACCAAATGTAACACTTGAGTTCAACCCAAACCCGACTCCGAATAATAATTGTGCATCAAACACTAATTATTATGATGAGAATTATCGCATTATGGTGAATTCACAATCCAATGGGAACTATGAGAATCATCACATTGCAAAAATGGAGGAAAGTGGATCATATGGAAGCTTTGAAGAAACCTCAGGGTATTCGATGTATACTCTCGATCAATTGCATTCAAATGTTCAACAATGGAGCTTCAGTGATTCAGCTGATGATTTACAATCAGTTGCTTTTGGCAATAGACATTGGTGA

Protein sequence

MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITERCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNVGGVNEKINSRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNCASNTNYYDENYRIMVNSQSNGNYENHHIAKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFSDSADDLQSVAFGNRHW

Homology

[Close]

BLAST of IVF0011858 vs. ExPASy Swiss-Prot
Match: Q9M2J7 (LOB domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=LBD29 PE=2 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 4.3e-50
Identity = 109/193 (56.48%), Postives = 137/193 (70.98%), Query Frame = 0


Query: 2   TGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITER 61
           + SGSPCGACKFLRRKC +GCVFAPYFCHEQGA+HFAAIHKVFGASN SKLL+ LPI++R
Sbjct: 6   SSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLPISDR 65

Query: 62  CEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNVGG 121
           CEAA+TISYEAQARLQDPIYGCVSHIFALQQQVV+LQA+L  LK+QAA+S++ A S    
Sbjct: 66  CEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMIFADS---P 125

Query: 122 VNEKINS-----RKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNCASNTNYYDENYRI 181
            +E  NS      K P H    + +   +Q ++  +   + T  +  A+ ++Y++E    
Sbjct: 126 TSENPNSYYGDTTKAPYHHDHQNIYHHHDQTHLVYQTGSSGTVQHGDATESSYHNETSSG 185

Query: 182 MVNSQSNGNYENH 190
           M       + E H
Sbjct: 186 MGEFSIYSDLEQH 195

[Close]

BLAST of IVF0011858 vs. ExPASy Swiss-Prot
Match: Q5UG13 (LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=CRL1 PE=1 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 9.6e-50
Identity = 97/112 (86.61%), Postives = 104/112 (92.86%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITE 60
           MTG GSPCGACKFLRRKCVRGCVFAPYFCHEQGA HFAAIHKVFGASNVSKLLA LP+ +
Sbjct: 1   MTGFGSPCGACKFLRRKCVRGCVFAPYFCHEQGAAHFAAIHKVFGASNVSKLLAHLPLAD 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESI 113
           R EAAVTISYEAQARL+DPIYGCV+HIFALQQQV++LQAQLASLK  AA+ I
Sbjct: 61  RPEAAVTISYEAQARLRDPIYGCVAHIFALQQQVMTLQAQLASLKAAAAQGI 112

[Close]

BLAST of IVF0011858 vs. ExPASy Swiss-Prot
Match: Q9SLB6 (LOB domain-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=LBD17 PE=2 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 9.9e-47
Identity = 91/117 (77.78%), Postives = 103/117 (88.03%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITE 60
           MTGSGSPCGACKFLRR+CV+GCVFAPYFCHEQGA+HFAAIH+VFGASN SKLL+ LP+ +
Sbjct: 1   MTGSGSPCGACKFLRRRCVKGCVFAPYFCHEQGASHFAAIHQVFGASNASKLLSHLPMED 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASS 118
           R EAA TI YEAQAR QDPIYGCVSHIF+LQQQVV+LQ QL  LK+QA +S+M   S
Sbjct: 61  RREAATTIYYEAQARRQDPIYGCVSHIFSLQQQVVNLQTQLEILKQQATQSMMAIDS 117

[Close]

BLAST of IVF0011858 vs. ExPASy Swiss-Prot
Match: Q9SJW5 (LOB domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN=LBD14 PE=1 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 3.9e-43
Identity = 101/186 (54.30%), Postives = 126/186 (67.74%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITE 60
           M G GSPCG CKFLRRKCV GCVFAPYFC+E+G+++FAAIHKVFGASN SKL++ LP  +
Sbjct: 1   MGGLGSPCGGCKFLRRKCVEGCVFAPYFCYEEGSSNFAAIHKVFGASNFSKLISHLPDHD 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNVG 120
           RC+A  TISYEA +RL DPIYGCVS IF+LQQQVVSLQAQ+  L+E+A+        +  
Sbjct: 61  RCDAVRTISYEAHSRLHDPIYGCVSQIFSLQQQVVSLQAQVVLLREEASRRF---PQDDP 120

Query: 121 GVNEKINSRKVPSH-PQDLHSWFQSEQPNVTLEFNP-NPTPNNN----------CASN-- 173
           G N K   + +    PQDLH+WF   Q  +  +F+P + T  +N          C+SN  
Sbjct: 121 GCNMKQQEKVLAQQMPQDLHNWF--HQGILDSDFDPMSGTTRDNERSMDHNESPCSSNES 180

[Close]

BLAST of IVF0011858 vs. ExPASy Swiss-Prot
Match: Q9SLB7 (LOB domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=LBD16 PE=1 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.1e-40
Identity = 83/125 (66.40%), Postives = 97/125 (77.60%), Query Frame = 0


Query: 3   GSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITERC 62
           G+GSPCGACKFLRRKC   C+FAPYF  EQGA  FAAIHKVFGASNVSKLL  +PI +RC
Sbjct: 11  GTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLLNVPIHDRC 70

Query: 63  EAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNVGGV 122
           EA VTI+YEAQARL DP+YGCVSHIFALQQQV  LQ+Q+  +K Q A    +A+ ++   
Sbjct: 71  EAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIAGHQTSAAGDLRHS 130

Query: 123 NEKIN 128
           +E  N
Sbjct: 131 SESTN 135

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BLAST of IVF0011858 vs. ExPASy TrEMBL
Match: A0A1S3BHF9 (LOB domain-containing protein 29 OS=Cucumis melo OX=3656 GN=LOC103489890 PE=3 SV=1)

HSP 1 Score: 490.7 bits (1262), Expect = 3.4e-135
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITE
Sbjct: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITE 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNVG 120
           RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNVG
Sbjct: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNVG 120

Query: 121 GVNEKINSRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNCASNTNYYDENYRIMVNS 180
           GVNEKINSRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNCASNTNYYDENYRIMVNS
Sbjct: 121 GVNEKINSRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNCASNTNYYDENYRIMVNS 180

Query: 181 QSNGNYENHHIAKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFSDSADDLQSVAFGN 240
           QSNGNYENHHIAKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFSDSADDLQSVAFGN
Sbjct: 181 QSNGNYENHHIAKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFSDSADDLQSVAFGN 240

Query: 241 RHW 244
           RHW
Sbjct: 241 RHW 243

[Close]

BLAST of IVF0011858 vs. ExPASy TrEMBL
Match: A0A0A0L817 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G396920 PE=3 SV=1)

HSP 1 Score: 485.7 bits (1249), Expect = 1.1e-133
Identity = 239/243 (98.35%), Postives = 241/243 (99.18%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITE
Sbjct: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITE 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNVG 120
           RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNVG
Sbjct: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNVG 120

Query: 121 GVNEKINSRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNCASNTNYYDENYRIMVNS 180
           GVNEK+NSRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNCASN NYYDENYRIMVNS
Sbjct: 121 GVNEKVNSRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNCASNANYYDENYRIMVNS 180

Query: 181 QSNGNYENHHIAKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFSDSADDLQSVAFGN 240
           QSNGNYENHHIAKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFSD+ DDLQSVAFGN
Sbjct: 181 QSNGNYENHHIAKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFSDTVDDLQSVAFGN 240

Query: 241 RHW 244
           RHW
Sbjct: 241 RHW 243

[Close]

BLAST of IVF0011858 vs. ExPASy TrEMBL
Match: A0A5A7T7B7 (LOB domain-containing protein 29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00850 PE=3 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 2.0e-127
Identity = 233/243 (95.88%), Postives = 233/243 (95.88%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITE
Sbjct: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITE 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNVG 120
           RCEAAVTISYEAQARLQDPIYGC          VVSLQAQLASLKEQAAESIMNASSNVG
Sbjct: 61  RCEAAVTISYEAQARLQDPIYGC----------VVSLQAQLASLKEQAAESIMNASSNVG 120

Query: 121 GVNEKINSRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNCASNTNYYDENYRIMVNS 180
           GVNEKINSRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNCASNTNYYDENYRIMVNS
Sbjct: 121 GVNEKINSRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNCASNTNYYDENYRIMVNS 180

Query: 181 QSNGNYENHHIAKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFSDSADDLQSVAFGN 240
           QSNGNYENHHIAKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFSDSADDLQSVAFGN
Sbjct: 181 QSNGNYENHHIAKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFSDSADDLQSVAFGN 233

Query: 241 RHW 244
           RHW
Sbjct: 241 RHW 233

[Close]

BLAST of IVF0011858 vs. ExPASy TrEMBL
Match: A0A6J1HQS1 (LOB domain-containing protein 29-like OS=Cucurbita maxima OX=3661 GN=LOC111466949 PE=3 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 7.5e-114
Identity = 216/243 (88.89%), Postives = 224/243 (92.18%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLP++E
Sbjct: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPVSE 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNVG 120
           RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAE++MN S N G
Sbjct: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAENMMNVSGNRG 120

Query: 121 GVNEKINSRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNCASNTNYYDENYRIMVNS 180
              +  NSRKVP HPQDLHSWFQSEQPNV LEFNPNPT  NN ASN  YYDENY IMVNS
Sbjct: 121 EAEK--NSRKVPCHPQDLHSWFQSEQPNVMLEFNPNPT-RNNSASNP-YYDENYSIMVNS 180

Query: 181 QSNGNYENHHIAKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFSDSADDLQSVAFGN 240
           QSN NYE HH+AKMEESGSYGSFEETSGYSMYTLD LHSNVQQWSF++SADDLQSVAFGN
Sbjct: 181 QSNENYE-HHMAKMEESGSYGSFEETSGYSMYTLDHLHSNVQQWSFNESADDLQSVAFGN 238

Query: 241 RHW 244
           RHW
Sbjct: 241 RHW 238

[Close]

BLAST of IVF0011858 vs. ExPASy TrEMBL
Match: A0A6J1HFS0 (LOB domain-containing protein 29-like OS=Cucurbita moschata OX=3662 GN=LOC111463902 PE=3 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 7.5e-114
Identity = 216/243 (88.89%), Postives = 224/243 (92.18%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLP++E
Sbjct: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPVSE 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNVG 120
           RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAE++MN S N G
Sbjct: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAENMMNVSGNRG 120

Query: 121 GVNEKINSRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNCASNTNYYDENYRIMVNS 180
              +  NSRKVP HPQDLHSWFQSEQPNV LEFNPNPT  NN ASN  YYDENY IMVNS
Sbjct: 121 EAEK--NSRKVPCHPQDLHSWFQSEQPNVMLEFNPNPT-RNNSASNP-YYDENYSIMVNS 180

Query: 181 QSNGNYENHHIAKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFSDSADDLQSVAFGN 240
           QSN NYE HH+AKMEESGSYGSFEETSGYSMYTLD LHSNVQQWSF++SADDLQSVAFGN
Sbjct: 181 QSNENYE-HHMAKMEESGSYGSFEETSGYSMYTLDHLHSNVQQWSFNESADDLQSVAFGN 238

Query: 241 RHW 244
           RHW
Sbjct: 241 RHW 238

[Close]

BLAST of IVF0011858 vs. NCBI nr
Match: XP_008447445.1 (PREDICTED: LOB domain-containing protein 29 [Cucumis melo])

HSP 1 Score: 498 bits (1282), Expect = 6.58e-178
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITE
Sbjct: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITE 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNVG 120
           RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNVG
Sbjct: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNVG 120

Query: 121 GVNEKINSRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNCASNTNYYDENYRIMVNS 180
           GVNEKINSRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNCASNTNYYDENYRIMVNS
Sbjct: 121 GVNEKINSRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNCASNTNYYDENYRIMVNS 180

Query: 181 QSNGNYENHHIAKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFSDSADDLQSVAFGN 240
           QSNGNYENHHIAKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFSDSADDLQSVAFGN
Sbjct: 181 QSNGNYENHHIAKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFSDSADDLQSVAFGN 240

Query: 241 RHW 243
           RHW
Sbjct: 241 RHW 243

[Close]

BLAST of IVF0011858 vs. NCBI nr
Match: XP_004152038.1 (LOB domain-containing protein 29 [Cucumis sativus] >KGN57933.1 hypothetical protein Csa_010658 [Cucumis sativus])

HSP 1 Score: 493 bits (1269), Expect = 6.32e-176
Identity = 239/243 (98.35%), Postives = 241/243 (99.18%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITE
Sbjct: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITE 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNVG 120
           RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNVG
Sbjct: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNVG 120

Query: 121 GVNEKINSRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNCASNTNYYDENYRIMVNS 180
           GVNEK+NSRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNCASN NYYDENYRIMVNS
Sbjct: 121 GVNEKVNSRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNCASNANYYDENYRIMVNS 180

Query: 181 QSNGNYENHHIAKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFSDSADDLQSVAFGN 240
           QSNGNYENHHIAKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFSD+ DDLQSVAFGN
Sbjct: 181 QSNGNYENHHIAKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFSDTVDDLQSVAFGN 240

Query: 241 RHW 243
           RHW
Sbjct: 241 RHW 243

[Close]

BLAST of IVF0011858 vs. NCBI nr
Match: KAA0038096.1 (LOB domain-containing protein 29 [Cucumis melo var. makuwa] >TYK20511.1 LOB domain-containing protein 29 [Cucumis melo var. makuwa])

HSP 1 Score: 472 bits (1215), Expect = 7.51e-168
Identity = 233/243 (95.88%), Postives = 233/243 (95.88%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITE
Sbjct: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITE 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNVG 120
           RCEAAVTISYEAQARLQDPIYGCV          VSLQAQLASLKEQAAESIMNASSNVG
Sbjct: 61  RCEAAVTISYEAQARLQDPIYGCV----------VSLQAQLASLKEQAAESIMNASSNVG 120

Query: 121 GVNEKINSRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNCASNTNYYDENYRIMVNS 180
           GVNEKINSRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNCASNTNYYDENYRIMVNS
Sbjct: 121 GVNEKINSRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNCASNTNYYDENYRIMVNS 180

Query: 181 QSNGNYENHHIAKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFSDSADDLQSVAFGN 240
           QSNGNYENHHIAKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFSDSADDLQSVAFGN
Sbjct: 181 QSNGNYENHHIAKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFSDSADDLQSVAFGN 233

Query: 241 RHW 243
           RHW
Sbjct: 241 RHW 233

[Close]

BLAST of IVF0011858 vs. NCBI nr
Match: XP_038888992.1 (LOB domain-containing protein 14-like [Benincasa hispida])

HSP 1 Score: 457 bits (1176), Expect = 2.54e-161
Identity = 229/246 (93.09%), Postives = 234/246 (95.12%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPI+E
Sbjct: 26  MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISE 85

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNVG 120
           RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNAS N G
Sbjct: 86  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASGNGG 145

Query: 121 GVNEKINSRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNN--CASN-TNYYDENYRIM 180
           GVNEKINSRKVPSHPQDLHSWFQSEQPN+TLEFNP P PNNN   ASN  NYYDENY IM
Sbjct: 146 GVNEKINSRKVPSHPQDLHSWFQSEQPNITLEFNPTPIPNNNNNSASNYPNYYDENYHIM 205

Query: 181 VNSQSNGNYENHHIAKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFSDSADDLQSVA 240
           VNS SNGNYE HH+AKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSF++SADDLQSVA
Sbjct: 206 VNSHSNGNYE-HHMAKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFNESADDLQSVA 265

Query: 241 FGNRHW 243
           FGNRHW
Sbjct: 266 FGNRHW 270

[Close]

BLAST of IVF0011858 vs. NCBI nr
Match: XP_022963632.1 (LOB domain-containing protein 29-like [Cucurbita moschata] >XP_022967412.1 LOB domain-containing protein 29-like [Cucurbita maxima] >KAG6571512.1 LOB domain-containing protein CRL1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011260.1 LOB domain-containing protein 29, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 427 bits (1097), Expect = 8.75e-150
Identity = 216/243 (88.89%), Postives = 225/243 (92.59%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLP++E
Sbjct: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPVSE 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNVG 120
           RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAE++MN S N G
Sbjct: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAENMMNVSGNRG 120

Query: 121 GVNEKINSRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNCASNTNYYDENYRIMVNS 180
              +  NSRKVP HPQDLHSWFQSEQPNV LEFNPNPT NN+ ASN  YYDENY IMVNS
Sbjct: 121 EAEK--NSRKVPCHPQDLHSWFQSEQPNVMLEFNPNPTRNNS-ASNP-YYDENYSIMVNS 180

Query: 181 QSNGNYENHHIAKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFSDSADDLQSVAFGN 240
           QSN NYE HH+AKMEESGSYGSFEETSGYSMYTLD LHSNVQQWSF++SADDLQSVAFGN
Sbjct: 181 QSNENYE-HHMAKMEESGSYGSFEETSGYSMYTLDHLHSNVQQWSFNESADDLQSVAFGN 238

Query: 241 RHW 243
           RHW
Sbjct: 241 RHW 238

[Close]

BLAST of IVF0011858 vs. TAIR 10
Match: AT3G58190.1 (lateral organ boundaries-domain 29 )

HSP 1 Score: 199.5 bits (506), Expect = 3.1e-51
Identity = 109/193 (56.48%), Postives = 137/193 (70.98%), Query Frame = 0


Query: 2   TGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITER 61
           + SGSPCGACKFLRRKC +GCVFAPYFCHEQGA+HFAAIHKVFGASN SKLL+ LPI++R
Sbjct: 6   SSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLPISDR 65

Query: 62  CEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNVGG 121
           CEAA+TISYEAQARLQDPIYGCVSHIFALQQQVV+LQA+L  LK+QAA+S++ A S    
Sbjct: 66  CEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMIFADS---P 125

Query: 122 VNEKINS-----RKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNCASNTNYYDENYRI 181
            +E  NS      K P H    + +   +Q ++  +   + T  +  A+ ++Y++E    
Sbjct: 126 TSENPNSYYGDTTKAPYHHDHQNIYHHHDQTHLVYQTGSSGTVQHGDATESSYHNETSSG 185

Query: 182 MVNSQSNGNYENH 190
           M       + E H
Sbjct: 186 MGEFSIYSDLEQH 195

[Close]

BLAST of IVF0011858 vs. TAIR 10
Match: AT2G42440.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 188.3 bits (477), Expect = 7.0e-48
Identity = 91/117 (77.78%), Postives = 103/117 (88.03%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITE 60
           MTGSGSPCGACKFLRR+CV+GCVFAPYFCHEQGA+HFAAIH+VFGASN SKLL+ LP+ +
Sbjct: 1   MTGSGSPCGACKFLRRRCVKGCVFAPYFCHEQGASHFAAIHQVFGASNASKLLSHLPMED 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASS 118
           R EAA TI YEAQAR QDPIYGCVSHIF+LQQQVV+LQ QL  LK+QA +S+M   S
Sbjct: 61  RREAATTIYYEAQARRQDPIYGCVSHIFSLQQQVVNLQTQLEILKQQATQSMMAIDS 117

[Close]

BLAST of IVF0011858 vs. TAIR 10
Match: AT2G31310.1 (LOB domain-containing protein 14 )

HSP 1 Score: 176.4 bits (446), Expect = 2.8e-44
Identity = 101/186 (54.30%), Postives = 126/186 (67.74%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITE 60
           M G GSPCG CKFLRRKCV GCVFAPYFC+E+G+++FAAIHKVFGASN SKL++ LP  +
Sbjct: 1   MGGLGSPCGGCKFLRRKCVEGCVFAPYFCYEEGSSNFAAIHKVFGASNFSKLISHLPDHD 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNVG 120
           RC+A  TISYEA +RL DPIYGCVS IF+LQQQVVSLQAQ+  L+E+A+        +  
Sbjct: 61  RCDAVRTISYEAHSRLHDPIYGCVSQIFSLQQQVVSLQAQVVLLREEASRRF---PQDDP 120

Query: 121 GVNEKINSRKVPSH-PQDLHSWFQSEQPNVTLEFNP-NPTPNNN----------CASN-- 173
           G N K   + +    PQDLH+WF   Q  +  +F+P + T  +N          C+SN  
Sbjct: 121 GCNMKQQEKVLAQQMPQDLHNWF--HQGILDSDFDPMSGTTRDNERSMDHNESPCSSNES 180

[Close]

BLAST of IVF0011858 vs. TAIR 10
Match: AT2G42430.1 (lateral organ boundaries-domain 16 )

HSP 1 Score: 168.3 bits (425), Expect = 7.5e-42
Identity = 83/125 (66.40%), Postives = 97/125 (77.60%), Query Frame = 0


Query: 3   GSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITERC 62
           G+GSPCGACKFLRRKC   C+FAPYF  EQGA  FAAIHKVFGASNVSKLL  +PI +RC
Sbjct: 11  GTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLLNVPIHDRC 70

Query: 63  EAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNVGGV 122
           EA VTI+YEAQARL DP+YGCVSHIFALQQQV  LQ+Q+  +K Q A    +A+ ++   
Sbjct: 71  EAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIAGHQTSAAGDLRHS 130

Query: 123 NEKIN 128
           +E  N
Sbjct: 131 SESTN 135

[Close]

BLAST of IVF0011858 vs. TAIR 10
Match: AT2G45420.1 (LOB domain-containing protein 18 )

HSP 1 Score: 160.2 bits (404), Expect = 2.1e-39
Identity = 75/107 (70.09%), Postives = 90/107 (84.11%), Query Frame = 0


Query: 3   GSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITERC 62
           G G PCGACKFLRRKCV GC+FAPYF  EQG+ +FAA+HKVFGASNVSKLL  +P+  R 
Sbjct: 33  GGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSKLLLHIPVHRRS 92

Query: 63  EAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAA 110
           +A VTI YEAQAR++DPIYGCV+HIFALQQQVV+LQA+++ L+   A
Sbjct: 93  DAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYLQAHLA 139

The following BLAST results are available for this feature:

BLAST of IVF0011858 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M2J7	4.3e-50	56.48	LOB domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=LBD29 PE=2 S...	[more]
Q5UG13	9.6e-50	86.61	LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=C...	[more]
Q9SLB6	9.9e-47	77.78	LOB domain-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=LBD17 PE=2 S...	[more]
Q9SJW5	3.9e-43	54.30	LOB domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN=LBD14 PE=1 S...	[more]
Q9SLB7	1.1e-40	66.40	LOB domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=LBD16 PE=1 S...	[more]

BLAST of IVF0011858 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BHF9	3.4e-135	100.00	LOB domain-containing protein 29 OS=Cucumis melo OX=3656 GN=LOC103489890 PE=3 SV...	[more]
A0A0A0L817	1.1e-133	98.35	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G396920 PE=3 SV...	[more]
A0A5A7T7B7	2.0e-127	95.88	LOB domain-containing protein 29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A6J1HQS1	7.5e-114	88.89	LOB domain-containing protein 29-like OS=Cucurbita maxima OX=3661 GN=LOC11146694...	[more]
A0A6J1HFS0	7.5e-114	88.89	LOB domain-containing protein 29-like OS=Cucurbita moschata OX=3662 GN=LOC111463...	[more]

BLAST of IVF0011858 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447445.1	6.58e-178	100.00	PREDICTED: LOB domain-containing protein 29 [Cucumis melo]	[more]
XP_004152038.1	6.32e-176	98.35	LOB domain-containing protein 29 [Cucumis sativus] >KGN57933.1 hypothetical prot...	[more]
KAA0038096.1	7.51e-168	95.88	LOB domain-containing protein 29 [Cucumis melo var. makuwa] >TYK20511.1 LOB doma...	[more]
XP_038888992.1	2.54e-161	93.09	LOB domain-containing protein 14-like [Benincasa hispida]	[more]
XP_022963632.1	8.75e-150	88.89	LOB domain-containing protein 29-like [Cucurbita moschata] >XP_022967412.1 LOB d...	[more]

BLAST of IVF0011858 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G58190.1	3.1e-51	56.48	lateral organ boundaries-domain 29	[more]
AT2G42440.1	7.0e-48	77.78	Lateral organ boundaries (LOB) domain family protein	[more]
AT2G31310.1	2.8e-44	54.30	LOB domain-containing protein 14	[more]
AT2G42430.1	7.5e-42	66.40	lateral organ boundaries-domain 16	[more]
AT2G45420.1	2.1e-39	70.09	LOB domain-containing protein 18	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 87..114
None	No IPR available	PANTHER	PTHR31529:SF41	LOB DOMAIN-CONTAINING PROTEIN-RELATED	coord: 1..240
None	No IPR available	PANTHER	PTHR31529	LOB DOMAIN CONTAINING PROTEIN	coord: 1..240
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 7..105 e-value: 1.3E-35 score: 122.0
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 6..108 score: 22.092014

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0011858.2	IVF0011858.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009755	hormone-mediated signaling pathway
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus