IVF0011796 (gene) Melon (IVF77) v1

Overview


Name	IVF0011796
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Unknown protein
Location	chr04: 11504765 .. 11505130 (+)
RNA-Seq Expression	IVF0011796
Synteny	IVF0011796

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAGAAACGGCTCGCGGACGGCTAAGGCAGGCGGCTCCAGGCGACGACTCGGCTAAGGCACGCGCGGCTCACACGACGGCTGGCACATGCTCGGGTGAAGGCGCGGGTTGGGTTCGGTTTGCGAAGAAGGGACGCGAGTCGGGTTTCGATCTGTGGAGAAGGAGTACGGGTCGGGTTTCGGTCTGTAGAGAAGGGACGCATACACGACCGACGGTTTCAGAGCAGGTCGACTATGCGACGATGGACGATCGGAGAAGGTTCGTTGACAGCACTATCACCCGGCAAACAACAACGTTGCACGGATGGGTCGGCTCGGACGGCGCGGTTGGGCTTGCAACGACAGCTGACAGAAAGCTCGGGTAG

mRNA sequence

ATGGTAGAAACGGCTCGCGGACGGCTAAGGCAGGCGGCTCCAGGCGACGACTCGGCTAAGGCACGCGCGGCTCACACGACGGCTGGCACATGCTCGGGTGAAGGCGCGGGTTGGGTTCGGTTTGCGAAGAAGGGACGCGAGTCGGGTTTCGATCTGTGGAGAAGGAGTACGGGTCGGGTTTCGGTCTGTAGAGAAGGGACGCATACACGACCGACGGTTTCAGAGCAGGTCGACTATGCGACGATGGACGATCGGAGAAGGTTCGTTGACAGCACTATCACCCGGCAAACAACAACGTTGCACGGATGGGTCGGCTCGGACGGCGCGGTTGGGCTTGCAACGACAGCTGACAGAAAGCTCGGGTAG

Coding sequence (CDS)

ATGGTAGAAACGGCTCGCGGACGGCTAAGGCAGGCGGCTCCAGGCGACGACTCGGCTAAGGCACGCGCGGCTCACACGACGGCTGGCACATGCTCGGGTGAAGGCGCGGGTTGGGTTCGGTTTGCGAAGAAGGGACGCGAGTCGGGTTTCGATCTGTGGAGAAGGAGTACGGGTCGGGTTTCGGTCTGTAGAGAAGGGACGCATACACGACCGACGGTTTCAGAGCAGGTCGACTATGCGACGATGGACGATCGGAGAAGGTTCGTTGACAGCACTATCACCCGGCAAACAACAACGTTGCACGGATGGGTCGGCTCGGACGGCGCGGTTGGGCTTGCAACGACAGCTGACAGAAAGCTCGGGTAG

Protein sequence

MVETARGRLRQAAPGDDSAKARAAHTTAGTCSGEGAGWVRFAKKGRESGFDLWRRSTGRVSVCREGTHTRPTVSEQVDYATMDDRRRFVDSTITRQTTTLHGWVGSDGAVGLATTADRKLG

Homology

[Close]

BLAST of IVF0011796 vs. ExPASy TrEMBL
Match: A0A5A7T317 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold127G001230 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 4.8e-61
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 1   MVETARGRLRQAAPGDDSAKARAAHTTAGTCSGEGAGWVRFAKKGRESGFDLWRRSTGRV 60
           MVETARGRLRQAAPGDDSAKARAAHTTAGTCSGEGAGWVRFAKKGRESGFDLWRRSTGRV
Sbjct: 97  MVETARGRLRQAAPGDDSAKARAAHTTAGTCSGEGAGWVRFAKKGRESGFDLWRRSTGRV 156

Query: 61  SVCREGTHTRPTVSEQVDYATMDDRRRFVDSTITRQTTTLHGWVGSDGAVGLATTADRKL 120
           SVCREGTHTRPTVSEQVDYATMDDRRRFVDSTITRQTTTLHGWVGSDGAVGLATTADRKL
Sbjct: 157 SVCREGTHTRPTVSEQVDYATMDDRRRFVDSTITRQTTTLHGWVGSDGAVGLATTADRKL 216

Query: 121 G 122
           G
Sbjct: 217 G 217

[Close]

BLAST of IVF0011796 vs. ExPASy TrEMBL
Match: E5GCF0 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 4.8e-61
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 1   MVETARGRLRQAAPGDDSAKARAAHTTAGTCSGEGAGWVRFAKKGRESGFDLWRRSTGRV 60
           MVETARGRLRQAAPGDDSAKARAAHTTAGTCSGEGAGWVRFAKKGRESGFDLWRRSTGRV
Sbjct: 48  MVETARGRLRQAAPGDDSAKARAAHTTAGTCSGEGAGWVRFAKKGRESGFDLWRRSTGRV 107

Query: 61  SVCREGTHTRPTVSEQVDYATMDDRRRFVDSTITRQTTTLHGWVGSDGAVGLATTADRKL 120
           SVCREGTHTRPTVSEQVDYATMDDRRRFVDSTITRQTTTLHGWVGSDGAVGLATTADRKL
Sbjct: 108 SVCREGTHTRPTVSEQVDYATMDDRRRFVDSTITRQTTTLHGWVGSDGAVGLATTADRKL 167

Query: 121 G 122
           G
Sbjct: 168 G 168

[Close]

BLAST of IVF0011796 vs. ExPASy TrEMBL
Match: A0A5D3CKD8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold356G00100 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 4.1e-12
Identity = 57/123 (46.34%), Postives = 64/123 (52.03%), Query Frame = 0


Query: 8   RLRQAAPGDDSAKARAAHTTAGTCSGEGAGWVRFAKKGRESGFDLWRRSTGRV-SVCREG 67
           R+R+ A    SAKAR AH    +  G   G+  F   GR  G     R  G   S CRE 
Sbjct: 184 RVRRLAQACSSAKARTAHAGDWSRLGCRRGF-EFGCPGRRCGSGSAVRVEGACGSSCREE 243

Query: 68  T--------HTRPTVSEQVDYATMDDRRRFVDSTITRQTTTLHGWVGSDGAVGLATTADR 122
                    HTR   SEQV Y TMDDR RFVD  + ++TT LHGWVG   A GLA  ADR
Sbjct: 244 AWVKFGCTRHTRSMASEQVGYVTMDDRSRFVDGVVAQRTTVLHGWVGLGDAAGLAMAADR 303

[Close]

BLAST of IVF0011796 vs. ExPASy TrEMBL
Match: A0A5D3BD33 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold92G00040 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.4e-07
Identity = 42/85 (49.41%), Postives = 49/85 (57.65%), Query Frame = 0


Query: 37  GWVRFAKKGRESGFDLWRRSTGRVSVCREGTHTRPTVSEQVDYATMDDRRRFVDSTITRQ 96
           G  R   KG   G     R    +S+ R+   +   VSE+V +ATMDDRRR VD  ITR+
Sbjct: 16  GSTRLICKGTARGRPTRGRKDADLSLVRK-VGSLHAVSERVGHATMDDRRRSVDDAITRR 75

Query: 97  TTTLHGWVGSDGAVGLATTADRKLG 122
            TTL GWV S GA  LA TAD KLG
Sbjct: 76  ATTLRGWVHSCGAARLAMTADGKLG 99

[Close]

BLAST of IVF0011796 vs. ExPASy TrEMBL
Match: A0A5A7TPD6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold9392G00030 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 2.3e-07
Identity = 34/49 (69.39%), Postives = 37/49 (75.51%), Query Frame = 0


Query: 73  VSEQVDYATMDDRRRFVDSTITRQTTTLHGWVGSDGAVGLATTADRKLG 122
           VSE+V +ATMDDRRR VD  ITR+ TTL GWV S GA  LA TAD KLG
Sbjct: 131 VSERVGHATMDDRRRSVDDAITRRATTLRGWVHSCGAARLAMTADGKLG 179

[Close]

BLAST of IVF0011796 vs. NCBI nr
Match: ADN34149.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 242 bits (618), Expect = 5.38e-80
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 1   MVETARGRLRQAAPGDDSAKARAAHTTAGTCSGEGAGWVRFAKKGRESGFDLWRRSTGRV 60
           MVETARGRLRQAAPGDDSAKARAAHTTAGTCSGEGAGWVRFAKKGRESGFDLWRRSTGRV
Sbjct: 48  MVETARGRLRQAAPGDDSAKARAAHTTAGTCSGEGAGWVRFAKKGRESGFDLWRRSTGRV 107

Query: 61  SVCREGTHTRPTVSEQVDYATMDDRRRFVDSTITRQTTTLHGWVGSDGAVGLATTADRKL 120
           SVCREGTHTRPTVSEQVDYATMDDRRRFVDSTITRQTTTLHGWVGSDGAVGLATTADRKL
Sbjct: 108 SVCREGTHTRPTVSEQVDYATMDDRRRFVDSTITRQTTTLHGWVGSDGAVGLATTADRKL 167

[Close]

BLAST of IVF0011796 vs. NCBI nr
Match: KAA0037862.1 (hypothetical protein E6C27_scaffold36G00220 [Cucumis melo var. makuwa] >TYK09820.1 hypothetical protein E5676_scaffold127G001230 [Cucumis melo var. makuwa])

HSP 1 Score: 242 bits (618), Expect = 2.76e-79
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 1   MVETARGRLRQAAPGDDSAKARAAHTTAGTCSGEGAGWVRFAKKGRESGFDLWRRSTGRV 60
           MVETARGRLRQAAPGDDSAKARAAHTTAGTCSGEGAGWVRFAKKGRESGFDLWRRSTGRV
Sbjct: 97  MVETARGRLRQAAPGDDSAKARAAHTTAGTCSGEGAGWVRFAKKGRESGFDLWRRSTGRV 156

Query: 61  SVCREGTHTRPTVSEQVDYATMDDRRRFVDSTITRQTTTLHGWVGSDGAVGLATTADRKL 120
           SVCREGTHTRPTVSEQVDYATMDDRRRFVDSTITRQTTTLHGWVGSDGAVGLATTADRKL
Sbjct: 157 SVCREGTHTRPTVSEQVDYATMDDRRRFVDSTITRQTTTLHGWVGSDGAVGLATTADRKL 216

[Close]

BLAST of IVF0011796 vs. NCBI nr
Match: KAA0036642.1 (hypothetical protein E6C27_scaffold3921G00110 [Cucumis melo var. makuwa] >TYK11995.1 hypothetical protein E5676_scaffold356G00100 [Cucumis melo var. makuwa])

HSP 1 Score: 79.7 bits (195), Expect = 8.26e-15
Identity = 57/123 (46.34%), Postives = 64/123 (52.03%), Query Frame = 0


Query: 8   RLRQAAPGDDSAKARAAHTTAGTCSGEGAGWVRFAKKGRESGFDLWRRSTGRV-SVCREG 67
           R+R+ A    SAKAR AH    +  G   G+  F   GR  G     R  G   S CRE 
Sbjct: 184 RVRRLAQACSSAKARTAHAGDWSRLGCRRGF-EFGCPGRRCGSGSAVRVEGACGSSCREE 243

Query: 68  T--------HTRPTVSEQVDYATMDDRRRFVDSTITRQTTTLHGWVGSDGAVGLATTADR 121
                    HTR   SEQV Y TMDDR RFVD  + ++TT LHGWVG   A GLA  ADR
Sbjct: 244 AWVKFGCTRHTRSMASEQVGYVTMDDRSRFVDGVVAQRTTVLHGWVGLGDAAGLAMAADR 303

[Close]

BLAST of IVF0011796 vs. NCBI nr
Match: TYJ97213.1 (hypothetical protein E5676_scaffold92G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 65.5 bits (158), Expect = 1.19e-10
Identity = 42/85 (49.41%), Postives = 49/85 (57.65%), Query Frame = 0


Query: 37  GWVRFAKKGRESGFDLWRRSTGRVSVCREGTHTRPTVSEQVDYATMDDRRRFVDSTITRQ 96
           G  R   KG   G     R    +S+ R+   +   VSE+V +ATMDDRRR VD  ITR+
Sbjct: 16  GSTRLICKGTARGRPTRGRKDADLSLVRK-VGSLHAVSERVGHATMDDRRRSVDDAITRR 75

Query: 97  TTTLHGWVGSDGAVGLATTADRKLG 121
            TTL GWV S GA  LA TAD KLG
Sbjct: 76  ATTLRGWVHSCGAARLAMTADGKLG 99

[Close]

BLAST of IVF0011796 vs. NCBI nr
Match: KAA0043089.1 (hypothetical protein E6C27_scaffold9392G00030 [Cucumis melo var. makuwa])

HSP 1 Score: 63.9 bits (154), Expect = 1.93e-09
Identity = 34/49 (69.39%), Postives = 37/49 (75.51%), Query Frame = 0


Query: 73  VSEQVDYATMDDRRRFVDSTITRQTTTLHGWVGSDGAVGLATTADRKLG 121
           VSE+V +ATMDDRRR VD  ITR+ TTL GWV S GA  LA TAD KLG
Sbjct: 131 VSERVGHATMDDRRRSVDDAITRRATTLRGWVHSCGAARLAMTADGKLG 179

The following BLAST results are available for this feature:

BLAST of IVF0011796 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0011796 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T317	4.8e-61	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
E5GCF0	4.8e-61	100.00	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A5D3CKD8	4.1e-12	46.34	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3BD33	1.4e-07	49.41	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TPD6	2.3e-07	69.39	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of IVF0011796 vs. NCBI nr


Match Name	E-value	Identity	Description
ADN34149.1	5.38e-80	100.00	hypothetical protein [Cucumis melo subsp. melo]	[more]
KAA0037862.1	2.76e-79	100.00	hypothetical protein E6C27_scaffold36G00220 [Cucumis melo var. makuwa] >TYK09820...	[more]
KAA0036642.1	8.26e-15	46.34	hypothetical protein E6C27_scaffold3921G00110 [Cucumis melo var. makuwa] >TYK119...	[more]
TYJ97213.1	1.19e-10	49.41	hypothetical protein E5676_scaffold92G00040 [Cucumis melo var. makuwa]	[more]
KAA0043089.1	1.93e-09	69.39	hypothetical protein E6C27_scaffold9392G00030 [Cucumis melo var. makuwa]	[more]

BLAST of IVF0011796 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0011796.1	IVF0011796.1	mRNA