IVF0011767 (gene) Melon (IVF77) v1

Overview


Name	IVF0011767
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	keratin, type II cytoskeletal 3 isoform X1
Location	chr09: 1039279 .. 1042444 (-)
RNA-Seq Expression	IVF0011767
Synteny	IVF0011767

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGAAATAATTTGTTTATATCATACTCTCCTTCATTCGCAGGAGGAGGAACAAACAAATCAGAAATGCCACGAAATATGAACGGAAACAGAAACCGAGACGGAGAAGATGAGAGAGGATTATTGTGGAATCTTCCAGTTCTTAAATCTTCCAGATTCGGAAATTTAGGTCCCGCCTTCGGTCTCGGCGTTGGTTGTGGCGTCGGCTTTGGCATCGGCCTCGTCGGAGGTCAATTCTTCATCATCAACTCTTTCCTTTTTCCCTTTCACTCATTATTAACTTGTTATTTCAATTTTTTTTTTCGTATGGATTGTTTCACCCTGCAACTTGCTGATTGTTTTATTTGGAGGGTTATTTAGTCTGAAATGTTTGTTTGGTTTAGGCTGATTATCGTTTTAATTTGTATTTGTGGCGTCTACTGTCTTGGACTGTTGTCCATGTTTCTTGAATTTTGGTTGAGAGAATATGAGTGTTTGGATTGTGTGTATATACATTGTCACCCTTGCTGCTGAAATTCTGTAGCCCTATGATATTTTCCACACGTTTAGGGATAGTTTGACTTTGTTTTGAAGAAGCTCAAAGATGGAGGAGACGCAATACAAGATCACGACATATGTATTTTTCGTGAAGTAACGTTATGAAGATGCTATGATTAACACAAATGAATTAAAGTTTAGACTTGAGAAAGGGATGCTATTTTCTAGGATAGTTTGAAAATCATTCAAATTGCAAAGGAATAAAGTTGTATTACTAAGCAAAATAACTAATTTTCCTACAAAATAGCTCAAATATGAATCCCCAAATTGCGCCCAGATGTAGTTCATTCAGGTGTTAGTGTATATCTTTAACATATATATACTTTTTAAATTGTATTTCATGCTTCATCTTTTTCATTCAGCAATTTCAGACATGCCTTTTGATGGATACTCCTCGAGAGGAATTCTAATATGAAAAGCTTTAACCATTTTCATTCAGGTGTTAGTGTCATTTATTTGTGTATTTATGTTTGTTTGTATGACTGTGATCAAATATGAAAAGCTGTAACCATTTTCACAAGTTTATCATCCAGCACCTTTTCTCTTCGTCTTTTCATATTTTTTTTTTGTACTTGTAAATATATTATTCAGTTTTGTTAACTTTTATGGTGGTTTTTCTTTTAGTCCGGAGGGTGGGTGTTGAATTTTATTTATCCCAATTTTGGAGTCTACAAACGTTACTTGGCTGCATATTTGAAGTTCCATCTATCTGTTTAGAAGGATTTTCAGGTGCTAGAAGCTTGAAATGTATTAGGCTTAAAAAATTGGAGTTCACAAAGCACTCTATTGTTGATGAGGAATAAATTCTCTCAATCCTTTGTGATAGTATGGCTTTTAGTCTATAAGAAACGCCATTGATTTTCTTTTTCATAGTAGACACTAGACATTATATGGATGAGAAAAAAAGGAACAAAAGGAATTGGGAAGATAAGGCATCCTTTGTGTCTCCCACATGCACACTTAAACACACACATAGAAGAAGAAGCTATCACAGATTTTAGGTTTCAGTAGAAGGTAGGGCATGAGTGTCAGCCAACTAATGAATATTATCATTGTTGAAATTTTATTTTGAACTTTATACTGTGGTGCACTTTCCTTGTTTAGTTTTATTGAAACTAATTAAATAAATGAATTTGCTAAAATTGTTCTCCACTGTAGGTGCTGGATTTGGTCCAGGAATTCCTGGCTTACAGCTTGGCTTTGGTCTTGGTGCTGGATGTGGAGTTGGCTTAGGATTTGGCTATGGTGTTGGCAGGGGCATTGCCCAAGATGACAAACGCAGATACTCTAATGTTGGGGATGTATTGCGCGGTCATCAAAGTATTTTTCCTCAGTAAGTTCTAAAACTAACTGTTTTCAACTTGTGACTACCATGTTCACTTAGTGATGCATTATTACAAGTCGGGGATAATTAACTTTTTCGTGGGTTTGGTGACATGGCTTTTTTATAATATGTATTTACTAAGGTGGCGATCTATAGCTGATGATTCAAAATAGTTTTGAAATGAATAACTTAGCTGATAGATTTCTCCACCCCACATGTTTTTTTTAAAAAAGTCCCATTCTTTATCTTCTTTCTCTCCTCTCTTCCCACTCTCTATCCCATTTCTCTCTTTTTGCTTAGTTTCTCTCTTCATGTTCTCTCCTTCCCTATTAATCTTCAGTGTATGTTGTGATTCACTTTCCATTTTGTCATTTCAACTCAGTTCATCTTCTTTCAATAACCTATAGAACAATTGGGGTCAACTTAGAGGTTCATCTTGAAAAATTGCCATTTTGTTTTTAAAATATCCATACCTTTTTAAAAGTTAGGAATATTACTCTTGACCTTCGAGAAATGTTTTTTTTGTCGCTCAAATTACTAACATCCTTCTCTTTCTTGTTCCCATTCGACTAGAGAGACACTATCTTATCCACCTCAGTTGGCTGGGTGAAATCATTGAAACTAACGGTTGATTGTCCAGATTGTTAAACTACCCTATGTTTTATCATCTTGGTTACATTTATAGGATTGTCAGAATAATAATTCCTTTTGAAATCATATTCTAATTGGCACAGGACTAAAATAATGCCTTTCTTAAGCTGTAATAATTAGAATCTAAACAGTGAAGTTAGTAACTGATTGATGACATTTCCACGATTTTCATTTATATCCTGTGCAGCTATTCTGACATCACAAAACATTTCTTGATTTTCATTTTTACTTGTCATCCATCAGTCAGGACGATATCGGCGCGCTTGTTGACGACCTTGTCCTAAATACAAAGAGGCTTATCCGAGCTACTTCAAGGGAGATTGACAAGTGGAAAAGATGAAATTACTCATTTGTTATTACATTGTACAAGTGATCTATTAGGAAGAACCACAATCAAAACTGAAGAAAAAAGAAACGTGCTGGCTGTCTACGTGGCTTTTAGAGGTAGAATTTATGTACAATTGTTTAGAAAGATGTATTTAATTGCTCTAAATCTCATATGCATTGGATTTTGAGCAATCTTAAAATGCCGAATACTTAATGTATTATCGTAGGGGTCCCTAGATGGCAGATTTATCATGTCCATTCTCCAGAAAGAAAGAAAAAAACCCTTTTTATTATACTTGTTCATTTTAAGCTTTTTCTGGTTGATTATA

mRNA sequence

GTGAAATAATTTGTTTATATCATACTCTCCTTCATTCGCAGGAGGAGGAACAAACAAATCAGAAATGCCACGAAATATGAACGGAAACAGAAACCGAGACGGAGAAGATGAGAGAGGATTATTGTGGAATCTTCCAGTTCTTAAATCTTCCAGATTCGGAAATTTAGGTCCCGCCTTCGGTCTCGGCGTTGGTTGTGGCGTCGGCTTTGGCATCGGCCTCGTCGGAGGTGCTGGATTTGGTCCAGGAATTCCTGGCTTACAGCTTGGCTTTGGTCTTGGTGCTGGATGTGGAGTTGGCTTAGGATTTGGCTATGGTGTTGGCAGGGGCATTGCCCAAGATGACAAACGCAGATACTCTAATGTTGGGGATGTATTGCGCGGTCATCAAAGTATTTTTCCTCATCAGGACGATATCGGCGCGCTTGTTGACGACCTTGTCCTAAATACAAAGAGGCTTATCCGAGCTACTTCAAGGGAGATTGACAAGTGGAAAAGATGAAATTACTCATTTGTTATTACATTGTACAAGTGATCTATTAGGAAGAACCACAATCAAAACTGAAGAAAAAAGAAACGTGCTGGCTGTCTACGTGGCTTTTAGAGGTAGAATTTATGTACAATTGTTTAGAAAGATGTATTTAATTGCTCTAAATCTCATATGCATTGGATTTTGAGCAATCTTAAAATGCCGAATACTTAATGTATTATCGTAGGGGTCCCTAGATGGCAGATTTATCATGTCCATTCTCCAGAAAGAAAGAAAAAAACCCTTTTTATTATACTTGTTCATTTTAAGCTTTTTCTGGTTGATTATA

Coding sequence (CDS)

ATGCCACGAAATATGAACGGAAACAGAAACCGAGACGGAGAAGATGAGAGAGGATTATTGTGGAATCTTCCAGTTCTTAAATCTTCCAGATTCGGAAATTTAGGTCCCGCCTTCGGTCTCGGCGTTGGTTGTGGCGTCGGCTTTGGCATCGGCCTCGTCGGAGGTGCTGGATTTGGTCCAGGAATTCCTGGCTTACAGCTTGGCTTTGGTCTTGGTGCTGGATGTGGAGTTGGCTTAGGATTTGGCTATGGTGTTGGCAGGGGCATTGCCCAAGATGACAAACGCAGATACTCTAATGTTGGGGATGTATTGCGCGGTCATCAAAGTATTTTTCCTCATCAGGACGATATCGGCGCGCTTGTTGACGACCTTGTCCTAAATACAAAGAGGCTTATCCGAGCTACTTCAAGGGAGATTGACAAGTGGAAAAGATGA

Protein sequence

MPRNMNGNRNRDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDVLRGHQSIFPHQDDIGALVDDLVLNTKRLIRATSREIDKWKR

Homology

[Close]

BLAST of IVF0011767 vs. ExPASy TrEMBL
Match: A0A1S4E347 (glycine-rich cell wall structural protein 1 OS=Cucumis melo OX=3656 GN=LOC103498610 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 5.3e-75
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MPRNMNGNRNRDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGP 60
           MPRNMNGNRNRDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGP
Sbjct: 1   MPRNMNGNRNRDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGP 60

Query: 61  GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDVLRGHQSIFPHQDDIGAL 120
           GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDVLRGHQSIFPHQDDIGAL
Sbjct: 61  GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDVLRGHQSIFPHQDDIGAL 120

Query: 121 VDDLVLNTKRLIRATSREIDKWKR 145
           VDDLVLNTKRLIRATSREIDKWKR
Sbjct: 121 VDDLVLNTKRLIRATSREIDKWKR 144

[Close]

BLAST of IVF0011767 vs. ExPASy TrEMBL
Match: A0A0A0KSM8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G646690 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 2.9e-73
Identity = 141/144 (97.92%), Postives = 143/144 (99.31%), Query Frame = 0


Query: 1   MPRNMNGNRNRDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGP 60
           MPRNMNGNRN+DGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGP
Sbjct: 1   MPRNMNGNRNQDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGP 60

Query: 61  GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDVLRGHQSIFPHQDDIGAL 120
           GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDVLRG QSIFPHQDDIGAL
Sbjct: 61  GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDVLRGRQSIFPHQDDIGAL 120

Query: 121 VDDLVLNTKRLIRATSREIDKWKR 145
           VDDLVLNTKRLIRATS+EIDKWKR
Sbjct: 121 VDDLVLNTKRLIRATSKEIDKWKR 144

[Close]

BLAST of IVF0011767 vs. ExPASy TrEMBL
Match: A0A6J1EY31 (keratin, type II cytoskeletal 2 epidermal isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111439279 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.2e-63
Identity = 123/144 (85.42%), Postives = 133/144 (92.36%), Query Frame = 0


Query: 1   MPRNMNGNRNRDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGP 60
           MPRNMNG+R+  GEDE G+LW LPVLKSSR G LGPAFGLGVGCGVGFGIGLVGGAGFGP
Sbjct: 1   MPRNMNGSRHEGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGP 60

Query: 61  GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDVLRGHQSIFPHQDDIGAL 120
           GIPGLQLGFGLGAGCGVGLGFGYG GRGIAQDDKRRYSNVGD+L G QSIFPH+D+IGAL
Sbjct: 61  GIPGLQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGRQSIFPHRDEIGAL 120

Query: 121 VDDLVLNTKRLIRATSREIDKWKR 145
           VD+L LNTK+LIR T++EIDKWKR
Sbjct: 121 VDELALNTKKLIRVTAQEIDKWKR 144

[Close]

BLAST of IVF0011767 vs. ExPASy TrEMBL
Match: A0A6J1ICW2 (keratin, type II cytoskeletal 3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472645 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 7.9e-63
Identity = 121/144 (84.03%), Postives = 132/144 (91.67%), Query Frame = 0


Query: 1   MPRNMNGNRNRDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGP 60
           MPRNMNG+R   GEDE G+LW LPVLKSSR G LGPAFGLGVGCGVGFGIGLVGGAGFGP
Sbjct: 1   MPRNMNGSRREGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGP 60

Query: 61  GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDVLRGHQSIFPHQDDIGAL 120
           GIPGLQLGFGLGAGCGVGLGFGYG GRGIAQDDKRRYSNVGD+L G QSIFPH+D+IGA+
Sbjct: 61  GIPGLQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGRQSIFPHRDEIGAV 120

Query: 121 VDDLVLNTKRLIRATSREIDKWKR 145
           VD+L LNTK+LI+ T++EIDKWKR
Sbjct: 121 VDELALNTKKLIQVTAKEIDKWKR 144

[Close]

BLAST of IVF0011767 vs. ExPASy TrEMBL
Match: A0A6J1F360 (keratin, type II cytoskeletal 2 epidermal isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111439279 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 8.8e-62
Identity = 123/144 (85.42%), Postives = 132/144 (91.67%), Query Frame = 0


Query: 1   MPRNMNGNRNRDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGP 60
           MPRNMNG+R+  GEDE G+LW LPVLKSSR G LGPAFGLGVGCGVGFGIGLVGGAGFGP
Sbjct: 1   MPRNMNGSRHEGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGP 60

Query: 61  GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDVLRGHQSIFPHQDDIGAL 120
           GIPGLQLGFGLGAGCGVGLGFGYG GRGIAQDDKRRYSNVGD+L G QSIFP QD+IGAL
Sbjct: 61  GIPGLQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGRQSIFP-QDEIGAL 120

Query: 121 VDDLVLNTKRLIRATSREIDKWKR 145
           VD+L LNTK+LIR T++EIDKWKR
Sbjct: 121 VDELALNTKKLIRVTAQEIDKWKR 143

[Close]

BLAST of IVF0011767 vs. NCBI nr
Match: XP_016902400.1 (PREDICTED: glycine-rich cell wall structural protein 1 [Cucumis melo] >XP_016902401.1 PREDICTED: glycine-rich cell wall structural protein 1 [Cucumis melo])

HSP 1 Score: 286 bits (731), Expect = 3.61e-97
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MPRNMNGNRNRDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGP 60
           MPRNMNGNRNRDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGP
Sbjct: 1   MPRNMNGNRNRDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGP 60

Query: 61  GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDVLRGHQSIFPHQDDIGAL 120
           GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDVLRGHQSIFPHQDDIGAL
Sbjct: 61  GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDVLRGHQSIFPHQDDIGAL 120

Query: 121 VDDLVLNTKRLIRATSREIDKWKR 144
           VDDLVLNTKRLIRATSREIDKWKR
Sbjct: 121 VDDLVLNTKRLIRATSREIDKWKR 144

[Close]

BLAST of IVF0011767 vs. NCBI nr
Match: XP_004141514.1 (glycine-rich cell wall structural protein 1 [Cucumis sativus] >KGN52595.1 hypothetical protein Csa_008740 [Cucumis sativus])

HSP 1 Score: 280 bits (716), Expect = 7.01e-95
Identity = 141/144 (97.92%), Postives = 143/144 (99.31%), Query Frame = 0


Query: 1   MPRNMNGNRNRDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGP 60
           MPRNMNGNRN+DGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGP
Sbjct: 1   MPRNMNGNRNQDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGP 60

Query: 61  GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDVLRGHQSIFPHQDDIGAL 120
           GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDVLRG QSIFPHQDDIGAL
Sbjct: 61  GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDVLRGRQSIFPHQDDIGAL 120

Query: 121 VDDLVLNTKRLIRATSREIDKWKR 144
           VDDLVLNTKRLIRATS+EIDKWKR
Sbjct: 121 VDDLVLNTKRLIRATSKEIDKWKR 144

[Close]

BLAST of IVF0011767 vs. NCBI nr
Match: XP_038889093.1 (ctenidin-1 isoform X1 [Benincasa hispida])

HSP 1 Score: 258 bits (659), Expect = 3.45e-86
Identity = 131/144 (90.97%), Postives = 137/144 (95.14%), Query Frame = 0


Query: 1   MPRNMNGNRNRDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGP 60
           MPRN NGNR++ GEDE GLLWNLPVLKSSRFG LGPAFGLGVGCGVGFGIGLVGGAGFGP
Sbjct: 1   MPRNTNGNRHQGGEDEGGLLWNLPVLKSSRFGKLGPAFGLGVGCGVGFGIGLVGGAGFGP 60

Query: 61  GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDVLRGHQSIFPHQDDIGAL 120
           GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGD+L GHQSIFP +DDI AL
Sbjct: 61  GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLHGHQSIFPQKDDIVAL 120

Query: 121 VDDLVLNTKRLIRATSREIDKWKR 144
           VD+LVLN+KRLIRATSREIDKWKR
Sbjct: 121 VDELVLNSKRLIRATSREIDKWKR 144

[Close]

BLAST of IVF0011767 vs. NCBI nr
Match: XP_023521208.1 (ATP-dependent RNA helicase glh-2 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 249 bits (637), Expect = 7.81e-83
Identity = 124/144 (86.11%), Postives = 133/144 (92.36%), Query Frame = 0


Query: 1   MPRNMNGNRNRDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGP 60
           MPRNMNG+R+   EDE G+LW LPVLKSSR G LGPAFGLGVGCGVGFGIGLVGGAGFGP
Sbjct: 1   MPRNMNGSRHEGREDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGP 60

Query: 61  GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDVLRGHQSIFPHQDDIGAL 120
           GIPGLQLGFGLGAGCGVGLGFGYG GRGIAQDDKRRYSNVGD+L GHQSIFPH+D+IGAL
Sbjct: 61  GIPGLQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGHQSIFPHRDEIGAL 120

Query: 121 VDDLVLNTKRLIRATSREIDKWKR 144
           VD+L LNTK+LIR T+REIDKWKR
Sbjct: 121 VDELALNTKKLIRVTAREIDKWKR 144

[Close]

BLAST of IVF0011767 vs. NCBI nr
Match: XP_022932819.1 (keratin, type II cytoskeletal 2 epidermal isoform X1 [Cucurbita moschata])

HSP 1 Score: 248 bits (633), Expect = 3.18e-82
Identity = 123/144 (85.42%), Postives = 133/144 (92.36%), Query Frame = 0


Query: 1   MPRNMNGNRNRDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGP 60
           MPRNMNG+R+  GEDE G+LW LPVLKSSR G LGPAFGLGVGCGVGFGIGLVGGAGFGP
Sbjct: 1   MPRNMNGSRHEGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGP 60

Query: 61  GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDVLRGHQSIFPHQDDIGAL 120
           GIPGLQLGFGLGAGCGVGLGFGYG GRGIAQDDKRRYSNVGD+L G QSIFPH+D+IGAL
Sbjct: 61  GIPGLQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGRQSIFPHRDEIGAL 120

Query: 121 VDDLVLNTKRLIRATSREIDKWKR 144
           VD+L LNTK+LIR T++EIDKWKR
Sbjct: 121 VDELALNTKKLIRVTAQEIDKWKR 144

[Close]

BLAST of IVF0011767 vs. TAIR 10
Match: AT4G10330.1 (glycine-rich protein )

HSP 1 Score: 163.3 bits (412), Expect = 1.4e-40
Identity = 78/135 (57.78%), Postives = 100/135 (74.07%), Query Frame = 0


Query: 8   NRNRDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQL 67
           NR R G+D++GLLW LP ++    G +GPAFGLGVGCG GFG GL+GG GFGPG+PGLQ 
Sbjct: 3   NRRRTGDDDKGLLWKLPQVRIRDIGKVGPAFGLGVGCGFGFGAGLIGGVGFGPGVPGLQF 62

Query: 68  GFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDVLRGHQSIFPHQDDIGALVDDLVLN 127
           G G GAGCG+G+GFGYGVGRG A D  R Y NVG          P  +++ +L+D+LV++
Sbjct: 63  GLGFGAGCGIGVGFGYGVGRGAAYDHSRSYYNVGK---------PSLNEVDSLIDELVVS 122

Query: 128 TKRLIRATSREIDKW 143
           TK+L++AT+ EIDKW
Sbjct: 123 TKKLVKATTNEIDKW 128

[Close]

BLAST of IVF0011767 vs. TAIR 10
Match: AT1G66820.1 (glycine-rich protein )

HSP 1 Score: 54.7 bits (130), Expect = 7.2e-08
Identity = 36/70 (51.43%), Postives = 43/70 (61.43%), Query Frame = 0


Query: 34  LGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQ-----LGFGLGAGCGVGLGFGYGVGRG 93
           +GP  G G+GCG G GIGL GG G G    GL      LGFG+G G G G G+G+GVG G
Sbjct: 39  VGPGIGGGIGCGAGIGIGLSGGLGIGAS-EGLDHSNVVLGFGIGCGIGFGFGYGFGVGGG 98

Query: 94  IAQDD-KRRY 98
            + DD K R+
Sbjct: 99  YSFDDIKERF 107

[Close]

BLAST of IVF0011767 vs. TAIR 10
Match: AT1G27695.1 (glycine-rich protein )

HSP 1 Score: 44.7 bits (104), Expect = 7.5e-05
Identity = 32/58 (55.17%), Postives = 36/58 (62.07%), Query Frame = 0


Query: 29 SRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVG 87
          S F  +G  FG GVGC  GFG+G     GFG G+P   LG G G GCGVGLG G+G G
Sbjct: 4  SDFTGVGVGFGFGVGC--GFGVGW----GFG-GMPMNILGVGAGGGCGVGLGLGWGFG 54

[Close]

BLAST of IVF0011767 vs. TAIR 10
Match: AT1G27695.2 (glycine-rich protein )

HSP 1 Score: 44.7 bits (104), Expect = 7.5e-05
Identity = 32/58 (55.17%), Postives = 36/58 (62.07%), Query Frame = 0


Query: 29 SRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVG 87
          S F  +G  FG GVGC  GFG+G     GFG G+P   LG G G GCGVGLG G+G G
Sbjct: 4  SDFTGVGVGFGFGVGC--GFGVGW----GFG-GMPMNILGVGAGGGCGVGLGLGWGFG 54

The following BLAST results are available for this feature:

BLAST of IVF0011767 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0011767 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E347	5.3e-75	100.00	glycine-rich cell wall structural protein 1 OS=Cucumis melo OX=3656 GN=LOC103498...	[more]
A0A0A0KSM8	2.9e-73	97.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G646690 PE=4 SV=1	[more]
A0A6J1EY31	1.2e-63	85.42	keratin, type II cytoskeletal 2 epidermal isoform X1 OS=Cucurbita moschata OX=36...	[more]
A0A6J1ICW2	7.9e-63	84.03	keratin, type II cytoskeletal 3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1F360	8.8e-62	85.42	keratin, type II cytoskeletal 2 epidermal isoform X2 OS=Cucurbita moschata OX=36...	[more]

BLAST of IVF0011767 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016902400.1	3.61e-97	100.00	PREDICTED: glycine-rich cell wall structural protein 1 [Cucumis melo] >XP_016902...	[more]
XP_004141514.1	7.01e-95	97.92	glycine-rich cell wall structural protein 1 [Cucumis sativus] >KGN52595.1 hypoth...	[more]
XP_038889093.1	3.45e-86	90.97	ctenidin-1 isoform X1 [Benincasa hispida]	[more]
XP_023521208.1	7.81e-83	86.11	ATP-dependent RNA helicase glh-2 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022932819.1	3.18e-82	85.42	keratin, type II cytoskeletal 2 epidermal isoform X1 [Cucurbita moschata]	[more]

BLAST of IVF0011767 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10330.1	1.4e-40	57.78	glycine-rich protein	[more]
AT1G66820.1	7.2e-08	51.43	glycine-rich protein	[more]
AT1G27695.1	7.5e-05	55.17	glycine-rich protein	[more]
AT1G27695.2	7.5e-05	55.17	glycine-rich protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34201:SF1	GLYCINE-RICH PROTEIN	coord: 5..144
None	No IPR available	PANTHER	PTHR34201	GLYCINE-RICH PROTEIN	coord: 5..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0011767.2	IVF0011767.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003724	RNA helicase activity