IVF0011763 (gene) Melon (IVF77) v1

Overview
NameIVF0011763
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr09: 23472947 .. 23473994 (-)
RNA-Seq ExpressionIVF0011763
SyntenyIVF0011763
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGAGAAGGTGAATTTGATTGGACTCGGTTGACTGCTCTTGTGGTGGGTGAAAAAAATGTATGCGAGCTTTCTCCTGTCCCGTTAATCGACTTTCACACATTTTTTAAGAAGAAATTCGGCGATTTTAGCTTTGATTGGTCGCCTGGTTCTATTGATTCATTTGGAAATTTACTTGGTTGTCTTCTTGTGATGTGATTAGGATGGCAATGTGCTCATATGGGTTAATTTTTTTTCCTGATTTTCTTCCATATCAAGGCATAGGTTTTCCATGTCAGGCCATTATAGAAGCTTGCAGGAAAGTGTTAAGGTGTGACTGGAAAAGTGGAGTGGAGCATCTTTTACTTGCTTTTTGCTGTAGTTTTCTTTTCCCAACTAGACAAAGCAGTACGTGGCAATATTCTTCTATGAGTACTTCTGTTGTTGATTTAACTTTGACATCTTTTTTTTCCTGATTTTAATTCATATTGTCTGCCAATTGGGAACATGAACTGTTGTTTGGATTTAAATAAGCCGCTCATTCCCTTTGGACTGGAAAGGCGTCTTTTAAGAATAAGTGAAGGTTCTTTGGGCTGTTATGATTATATAAATCATCCGAAAATTACTTTAGAAGTTTCGTTTATTGAATTGGCTCCTCCATTTTGAAAAGGAAAATTCTGTTTTTATAGAAATATTGAATAGTTATTTAATGCCATTGACAAGACCATTGGTTCTCTTATGTGTTTATTTTGAAATGAACAATTCTTTAGGATTTTCTTTGTCCCTGTGCATTCTTCGGTATTTTTGGTTATCATGTTTTTTACTGTACGAGGTCCAAGTTATAGTTCTATCCTAGGATATTTTTCATTTTATTGGATATCAGCTGAGGCATCTTGATGCATCTATGCTAAGAGAACTAACAGTTGTCTGGCCTGGTCTTAGGGAACCAAAAAAAGAAAAAAAAAAAAAGGCAAATATAGTCCTTATTCACCTCTTTCTCGTTGCAGTTGGCCATGCATCTCGATTCCTCAAAACTTTGCTTAGCTGCGTACTTTGGTGATATGTGA

mRNA sequence

ATGGACGAGAAGAAGAAATTCGGCGATTTTAGCTTTGATTGGTCGCCTGGTTCTATTGATTCATTTGGAAATTTACTTGGTTGTCTTCTTGTGATGCATAGGTTTTCCATGTCAGGCCATTATAGAAGCTTGCAGGAAAGTGTTAAGTTGGCCATGCATCTCGATTCCTCAAAACTTTGCTTAGCTGCGTACTTTGGTGATATGTGA

Coding sequence (CDS)

ATGGACGAGAAGAAGAAATTCGGCGATTTTAGCTTTGATTGGTCGCCTGGTTCTATTGATTCATTTGGAAATTTACTTGGTTGTCTTCTTGTGATGCATAGGTTTTCCATGTCAGGCCATTATAGAAGCTTGCAGGAAAGTGTTAAGTTGGCCATGCATCTCGATTCCTCAAAACTTTGCTTAGCTGCGTACTTTGGTGATATGTGA

Protein sequence

MDEKKKFGDFSFDWSPGSIDSFGNLLGCLLVMHRFSMSGHYRSLQESVKLAMHLDSSKLCLAAYFGDM
Homology
[Close]
BLAST of IVF0011763 vs. ExPASy TrEMBL
Match: A0A0A0KLY2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139520 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 3.1e-25
Identity = 61/76 (80.26%), Postives = 63/76 (82.89%), Query Frame = 0 

Query: 1  MDEKKKFGDFSFDWSPGSIDSFGNLLGCLLVM--------HRFSMSGHYRSLQESVKLAM 60
          MDEKKKFGD SFDWSPGSIDS G  LGCLL+M        HRFSMSGHYRSLQE+VKLAM
Sbjct: 1  MDEKKKFGDLSFDWSPGSIDSAGEFLGCLLIMNKFSSISRHRFSMSGHYRSLQENVKLAM 60

Query: 61 HLDSSKLCLAAYFGDM 69
          HL SSKLCLAAYFGDM
Sbjct: 61 HLHSSKLCLAAYFGDM 76

[Close]
BLAST of IVF0011763 vs. NCBI nr
Match: KAE8647804.1 (hypothetical protein Csa_000130 [Cucumis sativus])

HSP 1 Score: 73.9 bits (180), Expect = 1.05e-15
Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = 0 

Query: 33 HRFSMSGHYRSLQESVKLAMHLDSSKLCLAAYFGDM 68
          HRFSMSGHYRSLQE+VKLAMHL SSKLCLAAYFGDM
Sbjct: 15 HRFSMSGHYRSLQENVKLAMHLHSSKLCLAAYFGDM 50

The following BLAST results are available for this feature:
BLAST of IVF0011763 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0011763 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KLY23.1e-2580.26Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139520 PE=4 SV=1[more]
BLAST of IVF0011763 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8647804.11.05e-1594.44hypothetical protein Csa_000130 [Cucumis sativus][more]
BLAST of IVF0011763 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0011763.1IVF0011763.1mRNA