IVF0011659 (gene) Melon (IVF77) v1

Overview


Name	IVF0011659
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	VQ motif-containing protein 20-like
Location	chr03: 26891378 .. 26892233 (-)
RNA-Seq Expression	IVF0011659
Synteny	IVF0011659

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGTTCATGAAAATTAGGAATGATTTTGAAGGAACCCTAAATCAAGAATGAGTCCTCAACATCAACAACAACAAATCCATGGAAAAAGGGATAATCAAATCAACAACAATGCCAATAAACCATTGTCTCCACCGTCATTGAAGATCAATAAGGATTCTCATTTGATTCGGAAATCTTCCTCTTCTTCCAATACTTCTTCTCCATCTTCCTCTTCATCTTCCACTACCTCTCTTGTCAATGGCGTTCCCACCGCTGTCGCTAAGCCGCCTCAACGACATCCGGTGATTATATACACACATTCTCCCAAAATCATTCATACACATCCTCGAGATTTCATGGCCTTGGTTCAAAAGCTAACCGGAATGTCTCGATCTGATGATGAAGCTTCTACGAAAGCAACGGCGAAATCCGTCGATGAGAATAATAAAGTATCTAAAGTTGTGAATGATGATAATGAATCGTCGTCTGTTTTGACGACGGATGAAAATTGCTGTAATGGTAGCGGATCAAGCGGTGCGGTGGAAGGTGGTCAGGTTAATTCGTGTTTTGGTCCGGCGAGTTTTGAGCCACCGCCACCACCACCACCACCTCCGCCACAACTGGCGAATTCTTACCTAACGAATATGCCGGTTTATGGGCCGAATTCGACGGAGTTTTTGTGCGGTAATCAACCGATTTTTAACTATGATGATTCTTTGCTTTTTGGTGGTTCCAATATTCCTTCTCTTTCGTCCAACGGAATTAGTGATTTTAGCGAATTTTAGAATGACTTTTTTTATTATTGTTATTATTTTAAATAGTTGAGTTTGAGAATGGACTAATTATTTAATTCAATTTGATTTGAATGCAATAAATT

mRNA sequence

TTGTTCATGAAAATTAGGAATGATTTTGAAGGAACCCTAAATCAAGAATGAGTCCTCAACATCAACAACAACAAATCCATGGAAAAAGGGATAATCAAATCAACAACAATGCCAATAAACCATTGTCTCCACCGTCATTGAAGATCAATAAGGATTCTCATTTGATTCGGAAATCTTCCTCTTCTTCCAATACTTCTTCTCCATCTTCCTCTTCATCTTCCACTACCTCTCTTGTCAATGGCGTTCCCACCGCTGTCGCTAAGCCGCCTCAACGACATCCGGTGATTATATACACACATTCTCCCAAAATCATTCATACACATCCTCGAGATTTCATGGCCTTGGTTCAAAAGCTAACCGGAATGTCTCGATCTGATGATGAAGCTTCTACGAAAGCAACGGCGAAATCCGTCGATGAGAATAATAAAGTATCTAAAGTTGTGAATGATGATAATGAATCGTCGTCTGTTTTGACGACGGATGAAAATTGCTGTAATGGTAGCGGATCAAGCGGTGCGGTGGAAGGTGGTCAGGTTAATTCGTGTTTTGGTCCGGCGAGTTTTGAGCCACCGCCACCACCACCACCACCTCCGCCACAACTGGCGAATTCTTACCTAACGAATATGCCGGTTTATGGGCCGAATTCGACGGAGTTTTTGTGCGGTAATCAACCGATTTTTAACTATGATGATTCTTTGCTTTTTGGTGGTTCCAATATTCCTTCTCTTTCGTCCAACGGAATTAGTGATTTTAGCGAATTTTAGAATGACTTTTTTTATTATTGTTATTATTTTAAATAGTTGAGTTTGAGAATGGACTAATTATTTAATTCAATTTGATTTGAATGCAATAAATT

Coding sequence (CDS)

ATGAGTCCTCAACATCAACAACAACAAATCCATGGAAAAAGGGATAATCAAATCAACAACAATGCCAATAAACCATTGTCTCCACCGTCATTGAAGATCAATAAGGATTCTCATTTGATTCGGAAATCTTCCTCTTCTTCCAATACTTCTTCTCCATCTTCCTCTTCATCTTCCACTACCTCTCTTGTCAATGGCGTTCCCACCGCTGTCGCTAAGCCGCCTCAACGACATCCGGTGATTATATACACACATTCTCCCAAAATCATTCATACACATCCTCGAGATTTCATGGCCTTGGTTCAAAAGCTAACCGGAATGTCTCGATCTGATGATGAAGCTTCTACGAAAGCAACGGCGAAATCCGTCGATGAGAATAATAAAGTATCTAAAGTTGTGAATGATGATAATGAATCGTCGTCTGTTTTGACGACGGATGAAAATTGCTGTAATGGTAGCGGATCAAGCGGTGCGGTGGAAGGTGGTCAGGTTAATTCGTGTTTTGGTCCGGCGAGTTTTGAGCCACCGCCACCACCACCACCACCTCCGCCACAACTGGCGAATTCTTACCTAACGAATATGCCGGTTTATGGGCCGAATTCGACGGAGTTTTTGTGCGGTAATCAACCGATTTTTAACTATGATGATTCTTTGCTTTTTGGTGGTTCCAATATTCCTTCTCTTTCGTCCAACGGAATTAGTGATTTTAGCGAATTTTAG

Protein sequence

MSPQHQQQQIHGKRDNQINNNANKPLSPPSLKINKDSHLIRKSSSSSNTSSPSSSSSSTTSLVNGVPTAVAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKATAKSVDENNKVSKVVNDDNESSSVLTTDENCCNGSGSSGAVEGGQVNSCFGPASFEPPPPPPPPPPQLANSYLTNMPVYGPNSTEFLCGNQPIFNYDDSLLFGGSNIPSLSSNGISDFSEF

Homology

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BLAST of IVF0011659 vs. ExPASy Swiss-Prot
Match: Q9LS54 (VQ motif-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=VQ20 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 6.5e-27
Identity = 112/299 (37.46%), Postives = 147/299 (49.16%), Query Frame = 0


Query: 3   PQHQQQQIHGKRDNQINNNA-----NKPLSPPSLKINKDSHLIRKSSSSSNTSSPSSSSS 62
           P H     H KR+   NN+      +   SPP+LK+NKDSH+I+K        SPSS SS
Sbjct: 15  PHHHHH--HPKREPNENNSGILYTPSPSPSPPTLKVNKDSHVIKK------PPSPSSFSS 74

Query: 63  STTSLVNGVPTAVAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSD------- 122
           +            AKP  RHPVIIYTH+P+IIHT+P+DFMALVQKLTGM+ SD       
Sbjct: 75  A------------AKP--RHPVIIYTHTPRIIHTNPKDFMALVQKLTGMTHSDEDLGGGN 134

Query: 123 ---DEASTKATAKSVDE------NNK------------------------VSKVVNDDNE 182
              D    K+  ++V E      NN+                         + ++++D+E
Sbjct: 135 AMTDPGVVKSINRTVSEPTVDRKNNRNRCGGGNNYLRNYSGAGNGKGIFFNNTMISEDSE 194

Query: 183 SSSVLTTDENCCNGSGSSGAVEGGQVNSCFG------PASFEPPPPPPPPPPQLAN---- 239
           SSSV+TT+EN           E GQVNS         P    P PPPPPPPP + +    
Sbjct: 195 SSSVITTEEN---------IGEHGQVNSSLPYSAVAIPPQPPPHPPPPPPPPSMYDAAGI 254

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BLAST of IVF0011659 vs. ExPASy Swiss-Prot
Match: Q9CA36 (VQ motif-containing protein 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VQ8 PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.9e-05
Identity = 46/130 (35.38%), Postives = 64/130 (49.23%), Query Frame = 0


Query: 14  RDNQINNNANKPLSPPSLKINKDSHLIRKSSSSSNTSSPSSSSSSTTSLVNGVPTAVAKP 73
           R N+IN +      P SLK+  +SH I+K+SS  +   P   +S                
Sbjct: 5   RCNEINGS-----RPSSLKLAGESHTIKKTSSCKSKPRPHGRAS---------------- 64

Query: 74  PQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMS----RSDDEASTKATAKSVDENNKVS 133
               PVIIY HSPK+IHT   DFMALVQ+LTG+     R+  E+S+    + V+      
Sbjct: 65  ----PVIIYAHSPKVIHTRAEDFMALVQRLTGLDEIIRRNTSESSSSVVTEEVN------ 101

Query: 134 KVVNDDNESS 140
             V DDN ++
Sbjct: 125 --VGDDNTAA 101

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BLAST of IVF0011659 vs. ExPASy TrEMBL
Match: A0A5A7V0G0 (VQ motif-containing protein 20-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001740 PE=4 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 6.0e-124
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0


Query: 1   MSPQHQQQQIHGKRDNQINNNANKPLSPPSLKINKDSHLIRKSSSSSNTSSPSSSSSSTT 60
           MSPQHQQQQIHGKRDNQINNNANKPLSPPSLKINKDSHLIRKSSSSSNTSSPSSSSSSTT
Sbjct: 1   MSPQHQQQQIHGKRDNQINNNANKPLSPPSLKINKDSHLIRKSSSSSNTSSPSSSSSSTT 60

Query: 61  SLVNGVPTAVAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKATAK 120
           SLVNGVPTAVAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKATAK
Sbjct: 61  SLVNGVPTAVAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKATAK 120

Query: 121 SVDENNKVSKVVNDDNESSSVLTTDENCCNGSGSSGAVEGGQVNSCFGPASFEPPPPPPP 180
           SVDENNKVSKVVNDDNESSSVLTTDENCCNGSGSSGAVEGGQVNSCFGPASFEPPPPPPP
Sbjct: 121 SVDENNKVSKVVNDDNESSSVLTTDENCCNGSGSSGAVEGGQVNSCFGPASFEPPPPPPP 180

Query: 181 PPPQLANSYLTNMPVYGPNSTEFLCGNQPIFNYDDSLLFGGSNIPSLSSNGISDFSEF 239
           PPPQLANSYLTNMPVYGPNSTEFLCGNQPIFNYDDSLLFGGSNIPSLSSNGISDFSEF
Sbjct: 181 PPPQLANSYLTNMPVYGPNSTEFLCGNQPIFNYDDSLLFGGSNIPSLSSNGISDFSEF 238

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BLAST of IVF0011659 vs. ExPASy TrEMBL
Match: A0A1S3BCI6 (VQ motif-containing protein 20-like OS=Cucumis melo OX=3656 GN=LOC103488533 PE=4 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 7.8e-124
Identity = 237/238 (99.58%), Postives = 238/238 (100.00%), Query Frame = 0


Query: 1   MSPQHQQQQIHGKRDNQINNNANKPLSPPSLKINKDSHLIRKSSSSSNTSSPSSSSSSTT 60
           MSPQHQQQQIHGKRDNQINNNANKPLSPPSLKINKDSHLIRKSSSSSNTSSPSSSSSSTT
Sbjct: 1   MSPQHQQQQIHGKRDNQINNNANKPLSPPSLKINKDSHLIRKSSSSSNTSSPSSSSSSTT 60

Query: 61  SLVNGVPTAVAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKATAK 120
           SLVNGVPTAVAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKATAK
Sbjct: 61  SLVNGVPTAVAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKATAK 120

Query: 121 SVDENNKVSKVVNDDNESSSVLTTDENCCNGSGSSGAVEGGQVNSCFGPASFEPPPPPPP 180
           SVDENNK+SKVVNDDNESSSVLTTDENCCNGSGSSGAVEGGQVNSCFGPASFEPPPPPPP
Sbjct: 121 SVDENNKISKVVNDDNESSSVLTTDENCCNGSGSSGAVEGGQVNSCFGPASFEPPPPPPP 180

Query: 181 PPPQLANSYLTNMPVYGPNSTEFLCGNQPIFNYDDSLLFGGSNIPSLSSNGISDFSEF 239
           PPPQLANSYLTNMPVYGPNSTEFLCGNQPIFNYDDSLLFGGSNIPSLSSNGISDFSEF
Sbjct: 181 PPPQLANSYLTNMPVYGPNSTEFLCGNQPIFNYDDSLLFGGSNIPSLSSNGISDFSEF 238

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BLAST of IVF0011659 vs. ExPASy TrEMBL
Match: A0A0A0LKA6 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G350280 PE=4 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 3.9e-107
Identity = 222/241 (92.12%), Postives = 228/241 (94.61%), Query Frame = 0


Query: 1   MSPQHQQQQIHGKRDNQINNNANKPLSPPS-LKINKDSHLIRKSSSSSNTSSPSSSSSST 60
           MSPQ QQQQIHGKRDNQ NNNANKPLSPP  LKINKDSHLIRKSSSSSNTSSPSSSSSST
Sbjct: 1   MSPQ-QQQQIHGKRDNQTNNNANKPLSPPPLLKINKDSHLIRKSSSSSNTSSPSSSSSST 60

Query: 61  TSLVNGV-PTAVAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKAT 120
           TSL+NGV PTA AKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKAT
Sbjct: 61  TSLLNGVIPTAAAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKAT 120

Query: 121 AKS-VDENNKVSKVVNDDNESSSVLTTDENCCNGSGSSGAVEGGQVNSCFGPASFEPPPP 180
           AKS VDENNK SKVVNDDNESSSV+TTDENCC GSGSSGAVEGGQVNSCFGPA FE  PP
Sbjct: 121 AKSVVDENNKASKVVNDDNESSSVVTTDENCCGGSGSSGAVEGGQVNSCFGPAIFE--PP 180

Query: 181 PPPPPPQLANSYLTNMPVYGPNSTEFLCGNQPIFNYDDSLLFGGSNIPSLSSNGISDFSE 239
           PPPPPPQLA+SYL+N+PVYGPNSTEFLCGNQPIFNYDDSLLF GSNIPSLSSNG+SDFSE
Sbjct: 181 PPPPPPQLASSYLSNIPVYGPNSTEFLCGNQPIFNYDDSLLF-GSNIPSLSSNGVSDFSE 237

[Close]

BLAST of IVF0011659 vs. ExPASy TrEMBL
Match: A0A1S3BXM8 (VQ motif-containing protein 20 OS=Cucumis melo OX=3656 GN=LOC103494334 PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 1.0e-83
Identity = 192/252 (76.19%), Postives = 205/252 (81.35%), Query Frame = 0


Query: 1   MSPQHQQQQIHGKRDNQINNNANKP-LSPPSLKINKDSHLIRKSSSSSN--TSSPSSSSS 60
           MSP   QQQIHGKRDNQINNN NKP L PP LKINKDSHLIRK+SSSSN  TSSPSSSSS
Sbjct: 1   MSP---QQQIHGKRDNQINNNGNKPILCPPPLKINKDSHLIRKTSSSSNNTTSSPSSSSS 60

Query: 61  STTSLVNGV---PTAVAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDD-EA 120
           STTSLVNGV     A AKP QRHPVIIYTHSPK+IHTHPRDFMALVQKLTGMSRSDD EA
Sbjct: 61  STTSLVNGVAAAAAAAAKPLQRHPVIIYTHSPKVIHTHPRDFMALVQKLTGMSRSDDHEA 120

Query: 121 STK-ATAKS-VDENNKVSK----VVNDDNESSSVLTTDENCCNGSGSSGAVEGGQVNSCF 180
           STK AT K  VDENN  +K    VV+DDNESSSV+TTDENCC G G SG +E GQVNSCF
Sbjct: 121 STKLATTKPVVDENNNNNKGSKAVVSDDNESSSVVTTDENCCGGGGGSGMMEVGQVNSCF 180

Query: 181 GPASFEPPPPPP-PPPPQLANSYLTNMPVYGPNSTEFLCGNQPIFNYDDSLLFGGSNIPS 239
           GP  FEPPPPPP PPPPQLANSYLTN+P+Y PNS EFLC NQPIFNYDDSLLFGG+ +  
Sbjct: 181 GPVIFEPPPPPPSPPPPQLANSYLTNIPIYTPNSMEFLCANQPIFNYDDSLLFGGNRV-- 240

[Close]

BLAST of IVF0011659 vs. ExPASy TrEMBL
Match: A0A0A0LPK7 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G023620 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 1.4e-75
Identity = 176/241 (73.03%), Postives = 185/241 (76.76%), Query Frame = 0


Query: 1   MSPQHQQQQIHGKRDNQINNNA-NKP-LSPPSLKINKDSHLIRKSSSSSNTSSPSSSSSS 60
           MSPQ QQQQIHGK DNQI NN  NKP L PP LKINKDSHLIRK+SSSSNTSSPSSSSSS
Sbjct: 1   MSPQQQQQQIHGKMDNQITNNGNNKPILCPPPLKINKDSHLIRKTSSSSNTSSPSSSSSS 60

Query: 61  TTSLVNGVPTAVAK-PPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKA 120
           TTSL NGV  A AK PPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTG+         KA
Sbjct: 61  TTSLANGVAAAAAKPPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGI------CCCKA 120

Query: 121 TAKSVDENNKVSKVVNDDNESSSVLTTDENCCNGSGSSGAVEGGQVNSCFGPASFEPPPP 180
                        VVNDDNESSSV+TTDENCC G G SG +E GQVNSCFGPA FE    
Sbjct: 121 A------------VVNDDNESSSVVTTDENCC-GGGGSGLMEVGQVNSCFGPAIFE---- 180

Query: 181 PPPPPPQLANSYLTNMPVYGPNSTEFLCGNQPIFNYDDSLLFGGSNIPSLSSNGISDFSE 239
           PPPPPPQLANSYLTN+P+Y PNSTEFLC NQPIFNYDDSLLFGG+     S N   ++SE
Sbjct: 181 PPPPPPQLANSYLTNIPIYTPNSTEFLCTNQPIFNYDDSLLFGGNR----SVNDFCEYSE 214

[Close]

BLAST of IVF0011659 vs. NCBI nr
Match: KAA0061038.1 (VQ motif-containing protein 20-like [Cucumis melo var. makuwa])

HSP 1 Score: 454 bits (1169), Expect = 7.58e-161
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0


Query: 1   MSPQHQQQQIHGKRDNQINNNANKPLSPPSLKINKDSHLIRKSSSSSNTSSPSSSSSSTT 60
           MSPQHQQQQIHGKRDNQINNNANKPLSPPSLKINKDSHLIRKSSSSSNTSSPSSSSSSTT
Sbjct: 1   MSPQHQQQQIHGKRDNQINNNANKPLSPPSLKINKDSHLIRKSSSSSNTSSPSSSSSSTT 60

Query: 61  SLVNGVPTAVAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKATAK 120
           SLVNGVPTAVAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKATAK
Sbjct: 61  SLVNGVPTAVAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKATAK 120

Query: 121 SVDENNKVSKVVNDDNESSSVLTTDENCCNGSGSSGAVEGGQVNSCFGPASFEPPPPPPP 180
           SVDENNKVSKVVNDDNESSSVLTTDENCCNGSGSSGAVEGGQVNSCFGPASFEPPPPPPP
Sbjct: 121 SVDENNKVSKVVNDDNESSSVLTTDENCCNGSGSSGAVEGGQVNSCFGPASFEPPPPPPP 180

Query: 181 PPPQLANSYLTNMPVYGPNSTEFLCGNQPIFNYDDSLLFGGSNIPSLSSNGISDFSEF 238
           PPPQLANSYLTNMPVYGPNSTEFLCGNQPIFNYDDSLLFGGSNIPSLSSNGISDFSEF
Sbjct: 181 PPPQLANSYLTNMPVYGPNSTEFLCGNQPIFNYDDSLLFGGSNIPSLSSNGISDFSEF 238

[Close]

BLAST of IVF0011659 vs. NCBI nr
Match: XP_008445554.1 (PREDICTED: VQ motif-containing protein 20-like [Cucumis melo])

HSP 1 Score: 454 bits (1168), Expect = 1.08e-160
Identity = 237/238 (99.58%), Postives = 238/238 (100.00%), Query Frame = 0


Query: 1   MSPQHQQQQIHGKRDNQINNNANKPLSPPSLKINKDSHLIRKSSSSSNTSSPSSSSSSTT 60
           MSPQHQQQQIHGKRDNQINNNANKPLSPPSLKINKDSHLIRKSSSSSNTSSPSSSSSSTT
Sbjct: 1   MSPQHQQQQIHGKRDNQINNNANKPLSPPSLKINKDSHLIRKSSSSSNTSSPSSSSSSTT 60

Query: 61  SLVNGVPTAVAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKATAK 120
           SLVNGVPTAVAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKATAK
Sbjct: 61  SLVNGVPTAVAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKATAK 120

Query: 121 SVDENNKVSKVVNDDNESSSVLTTDENCCNGSGSSGAVEGGQVNSCFGPASFEPPPPPPP 180
           SVDENNK+SKVVNDDNESSSVLTTDENCCNGSGSSGAVEGGQVNSCFGPASFEPPPPPPP
Sbjct: 121 SVDENNKISKVVNDDNESSSVLTTDENCCNGSGSSGAVEGGQVNSCFGPASFEPPPPPPP 180

Query: 181 PPPQLANSYLTNMPVYGPNSTEFLCGNQPIFNYDDSLLFGGSNIPSLSSNGISDFSEF 238
           PPPQLANSYLTNMPVYGPNSTEFLCGNQPIFNYDDSLLFGGSNIPSLSSNGISDFSEF
Sbjct: 181 PPPQLANSYLTNMPVYGPNSTEFLCGNQPIFNYDDSLLFGGSNIPSLSSNGISDFSEF 238

[Close]

BLAST of IVF0011659 vs. NCBI nr
Match: KGN62345.1 (hypothetical protein Csa_018596 [Cucumis sativus])

HSP 1 Score: 398 bits (1023), Expect = 1.30e-138
Identity = 222/241 (92.12%), Postives = 228/241 (94.61%), Query Frame = 0


Query: 1   MSPQHQQQQIHGKRDNQINNNANKPLSPPSL-KINKDSHLIRKSSSSSNTSSPSSSSSST 60
           MSPQ QQQQIHGKRDNQ NNNANKPLSPP L KINKDSHLIRKSSSSSNTSSPSSSSSST
Sbjct: 1   MSPQ-QQQQIHGKRDNQTNNNANKPLSPPPLLKINKDSHLIRKSSSSSNTSSPSSSSSST 60

Query: 61  TSLVNGV-PTAVAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKAT 120
           TSL+NGV PTA AKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKAT
Sbjct: 61  TSLLNGVIPTAAAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKAT 120

Query: 121 AKSV-DENNKVSKVVNDDNESSSVLTTDENCCNGSGSSGAVEGGQVNSCFGPASFEPPPP 180
           AKSV DENNK SKVVNDDNESSSV+TTDENCC GSGSSGAVEGGQVNSCFGPA FEPPPP
Sbjct: 121 AKSVVDENNKASKVVNDDNESSSVVTTDENCCGGSGSSGAVEGGQVNSCFGPAIFEPPPP 180

Query: 181 PPPPPPQLANSYLTNMPVYGPNSTEFLCGNQPIFNYDDSLLFGGSNIPSLSSNGISDFSE 238
           PPPP  QLA+SYL+N+PVYGPNSTEFLCGNQPIFNYDDSLLFG SNIPSLSSNG+SDFSE
Sbjct: 181 PPPP--QLASSYLSNIPVYGPNSTEFLCGNQPIFNYDDSLLFG-SNIPSLSSNGVSDFSE 237

[Close]

BLAST of IVF0011659 vs. NCBI nr
Match: XP_038876677.1 (VQ motif-containing protein 20 [Benincasa hispida])

HSP 1 Score: 353 bits (905), Expect = 1.36e-120
Identity = 206/247 (83.40%), Postives = 211/247 (85.43%), Query Frame = 0


Query: 1   MSPQHQQQQIHGKRDNQ---INN---NANKPLSPPSLKINKDSHLIRKSSSSSNTSSPSS 60
           MSPQ  QQQ+HGKRDNQ   INN   N NKPL PP LKINKDSHLIRKSSSSSNTSSPSS
Sbjct: 1   MSPQ-PQQQLHGKRDNQNQSINNGNGNGNKPLCPPPLKINKDSHLIRKSSSSSNTSSPSS 60

Query: 61  SSSSTTSLVNGVPTAVAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEAS 120
           SSSSTTSLVNGV     KPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEAS
Sbjct: 61  SSSSTTSLVNGV-----KPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEAS 120

Query: 121 TKATAKSVDENNKVSK--VVNDDNESSSVLTTDENCCNGSGSSGAVEGGQVNSCFGPASF 180
           TKAT KSVDENNK SK  VVNDDNESSSV+TTDENCC G   SG VEGGQVNSCFG A F
Sbjct: 121 TKATTKSVDENNKGSKKAVVNDDNESSSVVTTDENCCGGG--SGVVEGGQVNSCFGAAIF 180

Query: 181 EPPPPPPPPPPQLANSYLTNMPVYGPNSTEFLCGNQP-IFNYDDSLLFGGSNIPSLSSNG 238
           EPPPPPPPP  QLANSYLTN+PVY PNSTEFLC NQP  FNYDDSLLFG  NIPSLSSNG
Sbjct: 181 EPPPPPPPP--QLANSYLTNIPVYRPNSTEFLCTNQPSFFNYDDSLLFGAHNIPSLSSNG 237

[Close]

BLAST of IVF0011659 vs. NCBI nr
Match: XP_008453685.1 (PREDICTED: VQ motif-containing protein 20 [Cucumis melo])

HSP 1 Score: 320 bits (820), Expect = 1.39e-107
Identity = 192/252 (76.19%), Postives = 205/252 (81.35%), Query Frame = 0


Query: 1   MSPQHQQQQIHGKRDNQINNNANKP-LSPPSLKINKDSHLIRKSSSSSN--TSSPSSSSS 60
           MSPQ   QQIHGKRDNQINNN NKP L PP LKINKDSHLIRK+SSSSN  TSSPSSSSS
Sbjct: 1   MSPQ---QQIHGKRDNQINNNGNKPILCPPPLKINKDSHLIRKTSSSSNNTTSSPSSSSS 60

Query: 61  STTSLVNGVPTAVA---KPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDD-EA 120
           STTSLVNGV  A A   KP QRHPVIIYTHSPK+IHTHPRDFMALVQKLTGMSRSDD EA
Sbjct: 61  STTSLVNGVAAAAAAAAKPLQRHPVIIYTHSPKVIHTHPRDFMALVQKLTGMSRSDDHEA 120

Query: 121 STK-ATAKSV-DENNKVSK----VVNDDNESSSVLTTDENCCNGSGSSGAVEGGQVNSCF 180
           STK AT K V DENN  +K    VV+DDNESSSV+TTDENCC G G SG +E GQVNSCF
Sbjct: 121 STKLATTKPVVDENNNNNKGSKAVVSDDNESSSVVTTDENCCGGGGGSGMMEVGQVNSCF 180

Query: 181 GPASFEPPPPPP-PPPPQLANSYLTNMPVYGPNSTEFLCGNQPIFNYDDSLLFGGSNIPS 238
           GP  FEPPPPPP PPPPQLANSYLTN+P+Y PNS EFLC NQPIFNYDDSLLFGG+ +  
Sbjct: 181 GPVIFEPPPPPPSPPPPQLANSYLTNIPIYTPNSMEFLCANQPIFNYDDSLLFGGNRV-- 240

[Close]

BLAST of IVF0011659 vs. TAIR 10
Match: AT3G18360.1 (VQ motif-containing protein )

HSP 1 Score: 122.5 bits (306), Expect = 4.7e-28
Identity = 112/299 (37.46%), Postives = 147/299 (49.16%), Query Frame = 0


Query: 3   PQHQQQQIHGKRDNQINNNA-----NKPLSPPSLKINKDSHLIRKSSSSSNTSSPSSSSS 62
           P H     H KR+   NN+      +   SPP+LK+NKDSH+I+K        SPSS SS
Sbjct: 15  PHHHHH--HPKREPNENNSGILYTPSPSPSPPTLKVNKDSHVIKK------PPSPSSFSS 74

Query: 63  STTSLVNGVPTAVAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSD------- 122
           +            AKP  RHPVIIYTH+P+IIHT+P+DFMALVQKLTGM+ SD       
Sbjct: 75  A------------AKP--RHPVIIYTHTPRIIHTNPKDFMALVQKLTGMTHSDEDLGGGN 134

Query: 123 ---DEASTKATAKSVDE------NNK------------------------VSKVVNDDNE 182
              D    K+  ++V E      NN+                         + ++++D+E
Sbjct: 135 AMTDPGVVKSINRTVSEPTVDRKNNRNRCGGGNNYLRNYSGAGNGKGIFFNNTMISEDSE 194

Query: 183 SSSVLTTDENCCNGSGSSGAVEGGQVNSCFG------PASFEPPPPPPPPPPQLAN---- 239
           SSSV+TT+EN           E GQVNS         P    P PPPPPPPP + +    
Sbjct: 195 SSSVITTEEN---------IGEHGQVNSSLPYSAVAIPPQPPPHPPPPPPPPSMYDAAGI 254

[Close]

BLAST of IVF0011659 vs. TAIR 10
Match: AT1G68450.1 (VQ motif-containing protein )

HSP 1 Score: 51.2 bits (121), Expect = 1.3e-06
Identity = 46/130 (35.38%), Postives = 64/130 (49.23%), Query Frame = 0


Query: 14  RDNQINNNANKPLSPPSLKINKDSHLIRKSSSSSNTSSPSSSSSSTTSLVNGVPTAVAKP 73
           R N+IN +      P SLK+  +SH I+K+SS  +   P   +S                
Sbjct: 5   RCNEINGS-----RPSSLKLAGESHTIKKTSSCKSKPRPHGRAS---------------- 64

Query: 74  PQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMS----RSDDEASTKATAKSVDENNKVS 133
               PVIIY HSPK+IHT   DFMALVQ+LTG+     R+  E+S+    + V+      
Sbjct: 65  ----PVIIYAHSPKVIHTRAEDFMALVQRLTGLDEIIRRNTSESSSSVVTEEVN------ 101

Query: 134 KVVNDDNESS 140
             V DDN ++
Sbjct: 125 --VGDDNTAA 101

[Close]

BLAST of IVF0011659 vs. TAIR 10
Match: AT1G21326.1 (VQ motif-containing protein )

HSP 1 Score: 45.4 bits (106), Expect = 7.2e-05
Identity = 36/98 (36.73%), Postives = 51/98 (52.04%), Query Frame = 0


Query: 28  PPSLKINKDSHLIRKSSSSSNTSSPSSSSSSTTSLVNGVPTAVAKPPQRHPVIIYTHSPK 87
           P  LK+  DSH I K        +P              P+    PP   PVIIYT SP+
Sbjct: 16  PIPLKVRGDSHKIIKKP----PLAPPHPQPQPPQTHQQEPSQSRPPP--GPVIIYTVSPR 75

Query: 88  IIHTHPRDFMALVQKLTGMSRSDDEASTKATAKSVDEN 126
           IIHTHP +FM LVQ+LTG + +   +S+ +++ S  ++
Sbjct: 76  IIHTHPNNFMTLVQRLTGKTSTSTTSSSYSSSTSAPKD 107

[Close]

BLAST of IVF0011659 vs. TAIR 10
Match: AT1G21320.1 (nucleotide binding;nucleic acid binding )

HSP 1 Score: 43.1 bits (100), Expect = 3.6e-04
Identity = 35/102 (34.31%), Postives = 50/102 (49.02%), Query Frame = 0


Query: 20  NNANKPLSPPSLKINKDSHLIRKSSSSSNTSSPSSSSSSTTSLVNGVPTAVAKPPQRHPV 79
           +  N    P  LK+  DSH I K        +P              P+    PP   PV
Sbjct: 8   SRGNMGPKPTPLKVRGDSHKIIKKP----PLAPPHPQPQPPQTHQQEPSQSRPPP--GPV 67

Query: 80  IIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKATAKS 122
            IYT +P+IIHTHP +FM LVQ+LTG + +   +S+ +++ S
Sbjct: 68  NIYTVTPRIIHTHPNNFMTLVQRLTGQTSTSTTSSSSSSSTS 103

The following BLAST results are available for this feature:

BLAST of IVF0011659 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LS54	6.5e-27	37.46	VQ motif-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=VQ20 PE=2 SV=1	[more]
Q9CA36	1.9e-05	35.38	VQ motif-containing protein 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=...	[more]

BLAST of IVF0011659 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V0G0	6.0e-124	100.00	VQ motif-containing protein 20-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A1S3BCI6	7.8e-124	99.58	VQ motif-containing protein 20-like OS=Cucumis melo OX=3656 GN=LOC103488533 PE=4...	[more]
A0A0A0LKA6	3.9e-107	92.12	VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G350280 PE=4 SV=...	[more]
A0A1S3BXM8	1.0e-83	76.19	VQ motif-containing protein 20 OS=Cucumis melo OX=3656 GN=LOC103494334 PE=4 SV=1	[more]
A0A0A0LPK7	1.4e-75	73.03	VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G023620 PE=4 SV=...	[more]

BLAST of IVF0011659 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0061038.1	7.58e-161	100.00	VQ motif-containing protein 20-like [Cucumis melo var. makuwa]	[more]
XP_008445554.1	1.08e-160	99.58	PREDICTED: VQ motif-containing protein 20-like [Cucumis melo]	[more]
KGN62345.1	1.30e-138	92.12	hypothetical protein Csa_018596 [Cucumis sativus]	[more]
XP_038876677.1	1.36e-120	83.40	VQ motif-containing protein 20 [Benincasa hispida]	[more]
XP_008453685.1	1.39e-107	76.19	PREDICTED: VQ motif-containing protein 20 [Cucumis melo]	[more]

BLAST of IVF0011659 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18360.1	4.7e-28	37.46	VQ motif-containing protein	[more]
AT1G68450.1	1.3e-06	35.38	VQ motif-containing protein	[more]
AT1G21326.1	7.2e-05	36.73	VQ motif-containing protein	[more]
AT1G21320.1	3.6e-04	34.31	nucleotide binding;nucleic acid binding	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 83..107 e-value: 1.7E-11 score: 43.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..187
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 107..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 166..189
IPR039832	VQ motif-containing protein 20	PANTHER	PTHR33143:SF4	VQ MOTIF-CONTAINING PROTEIN 20	coord: 1..238
IPR039607	VQ motif-containing protein 8/17/18/20/21/25	PANTHER	PTHR33143	F16F4.1 PROTEIN-RELATED	coord: 1..238

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0011659.1	IVF0011659.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding