IVF0011547 (gene) Melon (IVF77) v1

Overview


Name	IVF0011547
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Reverse transcriptase
Location	chr02: 6939727 .. 6944284 (-)
RNA-Seq Expression	IVF0011547
Synteny	IVF0011547

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGCCACGTAGAGGTGCACGCCGAGGAGGTGGTAGGGGAGGCAGAGGAGCCGGTCGTGGCCAGCCGGAGGCGCCACCTGCTGCACCGGCAGTCGACCCTAACGCACCGGTCACCCAGGCGGATCTCGCCGCGATGGAGCAGCGTTATCAAGACATGCTGCAAGCTGCTTTGGCGCCTTTCCTTGCCGCCCAGCAGAACCAGGCCGCCCCTGTTCAGGCCCAGGCCGTCGCTCCTCCAGCCCCTGAGGAAGCTCAACCAGTACCAGTTCAACTGTCGGCCGAGGCGAAACACTTACGGGACTTTAGGAAGTATAATCCTAAGACCTTTGACGGATCCATGGACAACCCCACAAAGGCCCAAATGTGGTTGACGTCCATAGAGACTATTTTCGGTACATGAAGTGCCCAGAAGACCAGAAGGTGCAGTGTGCAGTCTTCTTCTTGGAGGACAGGGGCACCGCCTGGTGGGAGACCGCTGAGAGAATGCTGGGGGGCGATGTCAGCAAGATAACTTGGGAGCAGTTCAAGGAGAACTTCTATGCTAAGTTCTTCTCTGCCAATGTGAAGCACGCCAAGCTGCAAGAGTTCCTAAACTTGGAGCAAGGCGACATGACGGTGGAGCAGTACGACGCCGAGTTCGATATGCTGTCCCGCTTTGCTCCCGATATGGTGAGGGATGAGGCTGCCAGGACGGAGAAATTCGTTAGAGGACTCAGGCTAGACCTTCAGGGCATTGTCAGAGCTCTCCGCCCAGCCACGCATGCTGATGCACTACGTATAGCACTGGATTTGAGCCTGCCTGAGAGAGCCGATTCGTCTAAGGCTGCCGGCAGAGGGTCAGCCTTGGGGCAGAAGAGGAAGGTGGAGACGCAGCCTGACGTAGTACCGCAGCGAACACTGAGGTCAGGAGGTGTCTTTCAGAGGCACCGACGGGAGCTTGCAGCAGCCGGGAGGACTTTGAGAGAGCTACCCGCTTGTACTACCTGCGGGAGAGTCCACGGAGGTCGTTGCTTAGCTGGAAGTGGAGTCTGCTTCAGATGTAGACAGCCGGGGCACACTGCTGATGTGTGTCCTCGGAAACCCTTTGAGACGACACCGCCCCAGCCTTCTGCGTCCCAGCAGGGGAGAGTTTACGCCACTACCCGGCAGGAGGCCGAGCGAGCTGGCACAGTGGTGACAGGTACGCTCCCAATTTTGGGGCATTATGCTTTTGTGCTATTTGACTCTGGGTCCTCCCACTCGTTTATATCCTCCGTTTTCGTTCAGCATGTGGGTTTGGAGGTAGAACCTTGGGTAGTGTTTTGTCGGTTTCTACTCCATCTGGGGAGGTCCTGTTGTCCAAAGAACAAATAAAGGCATGTCGGGTAGAGATAGCGAATCGTATGTTAGACGTGACCTTGCTAGTGTTAGACATGCAGGATTTTGATGTGATACTAGGCATGGATTGGCTGTCAGCCAACCATGCAAATATAGACTGTTTTGGCAAGGAAGTTGTCTTTAACCCTCCCTCCGGGGCTAGTTTCAAATTCAGGGGGGCAGGCATGGTATGTATACCCAAGGTCATCTCAGCCATGAAGGCTAGTAAACTACTCAGCCAGGGTACTTGGGGCATCTTGGCAAGCGTAGTGGATATTAGAGAGCCAGAAGTTTCCCTATCTTCTGAACCAGTGGTGAGGGAGTACCCCGACGTTTTCCCAGACGAACTCCCAGGACTTCCGCCTCCCAGAGAGGTAGACTTCGCCATCGAGTTAGAGCCGGGCACTGCTCCTATCTCGAGGGCCCCTTATAGAATGGCTCCAGCCGAGCTAAAGGAGTTGAAGGTCCAGTTGCAGGAGTTGCTGGACAAAGGCTTCATCCGGCCCAGTGTGTCGCCTTGGGGAGCCCCAGTATTGTTCGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGTATTGACTACCGAGAGCTGAACAAGGTGACGGTCAAAAACCGCTACCCCTTGCCCAGGATTGATGACCTGTTCGATCAGTTGCAGGGAGCCACTGTCTTTTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATTAGGGACGGTGACATTCCCAAGACGGCCTTTCGTTCGAGGTACGGACATTACGAGTTCGTGGTGATGTCTTTCGGCTTGACTAACGCTCCTGCAGTGTTCATGGATTTGATGAACAAGGTGTTTAAGGACTTTCTAGACTCGTTCGTCATAGTCTTCATTGATGACATCCTGATTTACTCAAAAACTGAGGCTGAGCACGAGGAGCACTTACACCAGGTTTTGGAGACCCTTCGAGCCAACAAGTTGTATGCCAAGTTCTCCAAGTGTGAATTCTGGTTAAGGAAGGTGACGTTTCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCAGTAGATCCCGCAAAGATTGAAGCGGTGACCAACTGGCCTCGACCGTCCACGGTTAGTGAAATTCGAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCGTTGACCCAGTTGACCAGGAAGGGAACCCTTTTGTCTGGAGCCCAGCATGCGAGAGGAGCTTTCAGGAGCTCAAACAGAAGCTAGTGACTGCACCAGTCCTGACAGTGCCCGATGGTTCGGGAAACTTTGTGATCTATAGTGATGCCTCCAAGAAGGGACTGGGCTGTGTCCTGATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCGCCAGTTGAAGATTCATGAGCAGAACTACCCTACCCACGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAGGCACTATCTGTACGGTGAGAAGATTCAGATTTACACCGACCATAAGAGCCTGAAGTACTTCTTCACTCAGAAGGAGTTGAACATGAGGCAGAGAAGGTGGCTCGAGTTGGTGAAAGACTACGACTGCGAGATCCTATACCACCCAGGTAAAGCAAATGTAGTGGCTGACGCGCTGAGTAGGAAGGTGGCACATTCAGCAGCGCTAATCACCAAGCAGACCCCCTTACTCAGGGATTTTGAGAGAGCCGAGATTGCAGTCTCAGTAGGTGAGGTTACCGCACAGTTGGCTCAGTTGTCAGTTCAGCCAACCTTGAGGCAAAAGATCATCGCTGCTCAGCTGAATGATCCTTACTTGACAGAGAAGCGTCGTATGGTAGAGACAGAGCAAGGTGAAGACTTCTCCATATCCTCTGACGATGGCCTTATGTTTGAGGGACGCCTGTGTGTGCCGGAAGACAGCGCAGTTAAGACGGAGCTTTTGACTGAGGCTCACAGTTCCCCGTTTACCATGCACCCTGGGAGTACGAAGATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGGGGCATGAAGAGGGAAGTGGCAGACTTTGTCAGTAGGTGCTTGGTGTGCCAGCAGGTGAAGGCACCTAGGCAGCATCCAGCAGGGTTGTTGCAACCCTTGAGTGTGCCAGGGTGGAAGTGGGAGAGTGTGTCGATGGATTTTATTACGGACTGCCCAAGACCCTAAAGGGCTACACGGTGATCTGGGTTGTGGTCGACAGACTCACGAAGTCGGCCCATTTCGTGCCAGGGAAGTCCACTTACACTGCCAGTAAGTGGGGGCAGTTATATATGACAGAGATTGTGAGACTACATGGAGTACCCTATCCATCATTTCAGACAGAGACGCTCGTTTCACATCGAAGTTCTGGAAGGGACTTCAACTTGCATTAGGTACGAGGCTGGACTTCAGCACGACATTCCACCCTCAGACTGATGGTCAGACAGAGAGATTGAACCAGATTTTGGAAGATATGCTGCGGGCCTGCGTGCTAGAGTTTTCAGGAAGTTGGGACTCCCATCTGCATCTGATGGAGTTTGCCTATAACAACAGCTACCAGGCTACTATCGGTATGGCACCGTTCGAGGCTCTGTATGGCAAGTGCTGTAGATCCCCTGTCTGCTGGGGCGAGGTTGGAGAGCAGAGGATGCTAGGCCCCGAGTTAGTGCAGACTACCAACGCAGCCATACAGAAGATCCGAGCTCGTATGCTGACAGCACAGAGCAGACAGAAGAGTTATGCTGATGTACGACGTAAGGACCTCGAGTTTGAAGTGGGAGATATGGTCTTTCTGAAGGTTGCACCCATGAAGGGTGTTCTGAGGTTCGCGAAGAAGGGGAAGCTGAGTCCACGCTTCGTAGGGCCGTTCGAGATACTGGAGCGGATTGGCCCCGTGGCTTATCGCTTGGCGCTACCCCCATCTTTTGCTGCAGTGCACGACGTATTCCATATCTCCATGCTGAGGAAATATGTCGCAGACCCTACACATGTGGTGGACTTCGAGCCACTGCAGATTAGCGAGAACTTGAGCTACGAGGAGCAGCCTGTCGAGGTCTTGGCAAGGGAGGTCAAGAAGCTTCGCAGTCGAGAAATTCCACTGGTCAAAATCCTTTGGCAGAACCATGGAGTGGAAGAGGCCACGTGGGAGAAAGAAGAGGACATGAGAGCCCAGTACCCCGAGCTGTTCGAGGATTAG

mRNA sequence

ATGCCGCCACGTAGAGGTGCACGCCGAGGAGGTGGTAGGGGAGGCAGAGGAGCCGGTCGTGGCCAGCCGGAGGCGCCACCTGCTGCACCGGCAGTCGACCCTAACGCACCGGTCACCCAGGCGGATCTCGCCGCGATGGAGCAGCGTTATCAAGACATGCTGCAAGCTGCTTTGGCGCCTTTCCTTGCCGCCCAGCAGAACCAGGCCGCCCCTGTTCAGGCCCAGGCCGTCGCTCCTCCAGCCCCTGAGGAAGCTCAACCAGTACCAGTTCAACTGTCGGCCGAGGCGAAACACTTACGGGACTTTAGGAAAGACTATTTTCGGTACATGAAGTGCCCAGAAGACCAGAAGGTGCAGTGTGCAGTCTTCTTCTTGGAGGACAGGGGCACCGCCTGGTGGGAGACCGCTGAGAGAATGCTGGGGGGCGATGTCAGCAAGATAACTTGGGAGCAGTTCAAGGAGAACTTCTATGCTAAGTTCTTCTCTGCCAATGTGAAGCACGCCAAGCTGCAAGAGTTCCTAAACTTGGAGCAAGGCGACATGACGGTGGAGCAGTACGACGCCGAGTTCGATATGCTGTCCCGCTTTGCTCCCGATATGGTGAGGGATGAGGCTGCCAGGACGGAGAAATTCGTTAGAGGACTCAGGCTAGACCTTCAGGGCATTGTCAGAGCTCTCCGCCCAGCCACGCATGCTGATGCACTACGTATAGCACTGGATTTGAGCCTGCCTGAGAGAGCCGATTCGTCTAAGGCTGCCGGCAGAGGGTCAGCCTTGGGGCAGAAGAGGAAGGTGGAGACGCAGCCTGACGTAGTACCGCAGCGAACACTGAGGTCAGGAGGTGTCTTTCAGAGGCACCGACGGGAGCTTGCAGCAGCCGGGAGGACTTTGAGAGAGCTACCCGCTTGTACTACCTGCGGGAGAGTCCACGGAGGTCGTTGCTTAGCTGGAAGTGGAGTCTGCTTCAGATGTAGACAGCCGGGGCACACTGCTGATGTGTGTCCTCGGAAACCCTTTGAGACGACACCGCCCCAGCCTTCTGCGTCCCAGCAGGGGAGAGTTTACGCCACTACCCGGCAGGAGGCCGAGCGAGCTGGCACAGTGGTGACAGCATGTGGGTTTGGAGGTAGAACCTTGGGTAGTGTTTTGTCGGTTTCTACTCCATCTGGGGAGGTCCTGTTGTCCAAAGAACAAATAAAGGCATGTCGGGTAGAGATAGCGAATCGTATGTTAGACGTGACCTTGCTAGTGTTAGACATGCAGGATTTTGATGTGATACTAGGCATGGATTGGCTGTCAGCCAACCATGCAAATATAGACTGTTTTGGCAAGGAAGTTGTCTTTAACCCTCCCTCCGGGGCTAGTTTCAAATTCAGGGGGGCAGGCATGGTATGTATACCCAAGGTCATCTCAGCCATGAAGGCTAGTAAACTACTCAGCCAGGGTACTTGGGGCATCTTGGCAAGCGTAGTGGATATTAGAGAGCCAGAAGTTTCCCTATCTTCTGAACCAGTGGTGAGGGAGTACCCCGACGTTTTCCCAGACGAACTCCCAGGACTTCCGCCTCCCAGAGAGGTAGACTTCGCCATCGAGTTAGAGCCGGGCACTGCTCCTATCTCGAGGGCCCCTTATAGAATGGCTCCAGCCGAGCTAAAGGAGTTGAAGGTCCAGTTGCAGGAGTTGCTGGACAAAGGCTTCATCCGGCCCAGTGTGTCGCCTTGGGGAGCCCCAGTATTGTTCGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGTATTGACTACCGAGAGCTGAACAAGGTGACGGTCAAAAACCGCTACCCCTTGCCCAGGATTGATGACCTGTTCGATCAGTTGCAGGGAGCCACTGTCTTTTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATTAGGGACGGTGACATTCCCAAGACGGCCTTTCGTTCGAGGTACGGACATTACGAGTTCGTGGTGATGTCTTTCGGCTTGACTAACGCTCCTGCAGTGTTCATGGATTTGATGAACAAGGTGTTTAAGGACTTTCTAGACTCGTTCGTCATAGTCTTCATTGATGACATCCTGATTTACTCAAAAACTGAGGCTGAGCACGAGGAGCACTTACACCAGGTTTTGGAGACCCTTCGAGCCAACAAGTTGTATGCCAAGTTCTCCAAGTGTGAATTCTGGTTAAGGAAGGTGACGTTTCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCAGTAGATCCCGCAAAGATTGAAGCGGTGACCAACTGGCCTCGACCGTCCACGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCGTTGACCCAGTTGACCAGGAAGGGAACCCTTTTGTCTGGAGCCCAGCATGCGAGAGGAGCTTTCAGGAGCTCAAACAGAAGCTAGTGACTGCACCAGTCCTGACAGTGCCCGATGGTTCGGGAAACTTTGTGATCTATAGTGATGCCTCCAAGAAGGGACTGGGCTGTGTCCTGATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCGCCAGTTGAAGATTCATGAGCAGAACTACCCTACCCACGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAGGCACTATCTGTACGGTGAGAAGATTCAGATTTACACCGACCATAAGAGCCTGAAGTACTTCTTCACTCAGAAGGAGTTGAACATGAGGCAGAGAAGGTGGCTCGAGTTGGTGAAAGACTACGACTGCGAGATCCTATACCACCCAGGTAAAGCAAATGTAGTGGCTGACGCGCTGAGTAGGAAGGTGGCACATTCAGCAGCGCTAATCACCAAGCAGACCCCCTTACTCAGGGATTTTGAGAGAGCCGAGATTGCAGTCTCAGTAGGTGAGGTTACCGCACAGTTGGCTCAGTTGTCAGTTCAGCCAACCTTGAGGCAAAAGATCATCGCTGCTCAGCTGAATGATCCTTACTTGACAGAGAAGCGTCGTATGGTAGAGACAGAGCAAGGTGAAGACTTCTCCATATCCTCTGACGATGGCCTTATGTTTGAGGGACGCCTGTGTGTGCCGGAAGACAGCGCAGTTAAGACGGAGCTTTTGACTGAGGCTCACAGTTCCCCGTTTACCATGCACCCTGGGAGTACGAAGATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGGGGCATGAAGAGGGAAGTGGCAGACTTTGTCAGTAGGTGCTTGGTGTGCCAGCAGGTGAAGGCACCTAGGCAGCATCCAGCAGGGTTGTTGCAACCCTTGAGTGTGCCAGGACTCACGAAGTCGGCCCATTTCGTGCCAGGGAAGTCCACTTACACTGCCAACAGAGACGCTCGTTTCACATCGAAGTTCTGGAAGGGACTTCAACTTGCATTAGGTACGAGGCTGGACTTCAGCACGACATTCCACCCTCAGACTGATGGTCAGACAGAGAGATTGAACCAGATTTTGGAAGATATGCTGCGGGCCTGCGTGCTAGAGTTTTCAGGAAGTTGGGACTCCCATCTGCATCTGATGGAGTTTGCCTATAACAACAGCTACCAGGCTACTATCGGTATGGCACCGTTCGAGGCTCTGTATGGCAAGTGCTGTAGATCCCCTGTCTGCTGGGGCGAGGTTGGAGAGCAGAGGATGCTAGGCCCCGAGTTAGTGCAGACTACCAACGCAGCCATACAGAAGATCCGAGCTCGTATGCTGACAGCACAGAGCAGACAGAAGAGTTATGCTGATGTACGACGTAAGGACCTCGAGTTTGAAGTGGGAGATATGGTCTTTCTGAAGGTTGCACCCATGAAGGGTGTTCTGAGGTTCGCGAAGAAGGGGAAGCTGAGTCCACGCTTCGTAGGGCCGTTCGAGATACTGGAGCGGATTGGCCCCGTGGCTTATCGCTTGGCGCTACCCCCATCTTTTGCTGCAGTGCACGACGTATTCCATATCTCCATGCTGAGGAAATATGTCGCAGACCCTACACATGTGGTGGACTTCGAGCCACTGCAGATTAGCGAGAACTTGAGCTACGAGGAGCAGCCTGTCGAGGTCTTGGCAAGGGAGGTCAAGAAGCTTCGCAGTCGAGAAATTCCACTGGTCAAAATCCTTTGGCAGAACCATGGAGTGGAAGAGGCCACGTGGGAGAAAGAAGAGGACATGAGAGCCCAGTACCCCGAGCTGTTCGAGGATTAG

Coding sequence (CDS)

ATGCCGCCACGTAGAGGTGCACGCCGAGGAGGTGGTAGGGGAGGCAGAGGAGCCGGTCGTGGCCAGCCGGAGGCGCCACCTGCTGCACCGGCAGTCGACCCTAACGCACCGGTCACCCAGGCGGATCTCGCCGCGATGGAGCAGCGTTATCAAGACATGCTGCAAGCTGCTTTGGCGCCTTTCCTTGCCGCCCAGCAGAACCAGGCCGCCCCTGTTCAGGCCCAGGCCGTCGCTCCTCCAGCCCCTGAGGAAGCTCAACCAGTACCAGTTCAACTGTCGGCCGAGGCGAAACACTTACGGGACTTTAGGAAAGACTATTTTCGGTACATGAAGTGCCCAGAAGACCAGAAGGTGCAGTGTGCAGTCTTCTTCTTGGAGGACAGGGGCACCGCCTGGTGGGAGACCGCTGAGAGAATGCTGGGGGGCGATGTCAGCAAGATAACTTGGGAGCAGTTCAAGGAGAACTTCTATGCTAAGTTCTTCTCTGCCAATGTGAAGCACGCCAAGCTGCAAGAGTTCCTAAACTTGGAGCAAGGCGACATGACGGTGGAGCAGTACGACGCCGAGTTCGATATGCTGTCCCGCTTTGCTCCCGATATGGTGAGGGATGAGGCTGCCAGGACGGAGAAATTCGTTAGAGGACTCAGGCTAGACCTTCAGGGCATTGTCAGAGCTCTCCGCCCAGCCACGCATGCTGATGCACTACGTATAGCACTGGATTTGAGCCTGCCTGAGAGAGCCGATTCGTCTAAGGCTGCCGGCAGAGGGTCAGCCTTGGGGCAGAAGAGGAAGGTGGAGACGCAGCCTGACGTAGTACCGCAGCGAACACTGAGGTCAGGAGGTGTCTTTCAGAGGCACCGACGGGAGCTTGCAGCAGCCGGGAGGACTTTGAGAGAGCTACCCGCTTGTACTACCTGCGGGAGAGTCCACGGAGGTCGTTGCTTAGCTGGAAGTGGAGTCTGCTTCAGATGTAGACAGCCGGGGCACACTGCTGATGTGTGTCCTCGGAAACCCTTTGAGACGACACCGCCCCAGCCTTCTGCGTCCCAGCAGGGGAGAGTTTACGCCACTACCCGGCAGGAGGCCGAGCGAGCTGGCACAGTGGTGACAGCATGTGGGTTTGGAGGTAGAACCTTGGGTAGTGTTTTGTCGGTTTCTACTCCATCTGGGGAGGTCCTGTTGTCCAAAGAACAAATAAAGGCATGTCGGGTAGAGATAGCGAATCGTATGTTAGACGTGACCTTGCTAGTGTTAGACATGCAGGATTTTGATGTGATACTAGGCATGGATTGGCTGTCAGCCAACCATGCAAATATAGACTGTTTTGGCAAGGAAGTTGTCTTTAACCCTCCCTCCGGGGCTAGTTTCAAATTCAGGGGGGCAGGCATGGTATGTATACCCAAGGTCATCTCAGCCATGAAGGCTAGTAAACTACTCAGCCAGGGTACTTGGGGCATCTTGGCAAGCGTAGTGGATATTAGAGAGCCAGAAGTTTCCCTATCTTCTGAACCAGTGGTGAGGGAGTACCCCGACGTTTTCCCAGACGAACTCCCAGGACTTCCGCCTCCCAGAGAGGTAGACTTCGCCATCGAGTTAGAGCCGGGCACTGCTCCTATCTCGAGGGCCCCTTATAGAATGGCTCCAGCCGAGCTAAAGGAGTTGAAGGTCCAGTTGCAGGAGTTGCTGGACAAAGGCTTCATCCGGCCCAGTGTGTCGCCTTGGGGAGCCCCAGTATTGTTCGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGTATTGACTACCGAGAGCTGAACAAGGTGACGGTCAAAAACCGCTACCCCTTGCCCAGGATTGATGACCTGTTCGATCAGTTGCAGGGAGCCACTGTCTTTTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATTAGGGACGGTGACATTCCCAAGACGGCCTTTCGTTCGAGGTACGGACATTACGAGTTCGTGGTGATGTCTTTCGGCTTGACTAACGCTCCTGCAGTGTTCATGGATTTGATGAACAAGGTGTTTAAGGACTTTCTAGACTCGTTCGTCATAGTCTTCATTGATGACATCCTGATTTACTCAAAAACTGAGGCTGAGCACGAGGAGCACTTACACCAGGTTTTGGAGACCCTTCGAGCCAACAAGTTGTATGCCAAGTTCTCCAAGTGTGAATTCTGGTTAAGGAAGGTGACGTTTCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCAGTAGATCCCGCAAAGATTGAAGCGGTGACCAACTGGCCTCGACCGTCCACGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCGTTGACCCAGTTGACCAGGAAGGGAACCCTTTTGTCTGGAGCCCAGCATGCGAGAGGAGCTTTCAGGAGCTCAAACAGAAGCTAGTGACTGCACCAGTCCTGACAGTGCCCGATGGTTCGGGAAACTTTGTGATCTATAGTGATGCCTCCAAGAAGGGACTGGGCTGTGTCCTGATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCGCCAGTTGAAGATTCATGAGCAGAACTACCCTACCCACGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAGGCACTATCTGTACGGTGAGAAGATTCAGATTTACACCGACCATAAGAGCCTGAAGTACTTCTTCACTCAGAAGGAGTTGAACATGAGGCAGAGAAGGTGGCTCGAGTTGGTGAAAGACTACGACTGCGAGATCCTATACCACCCAGGTAAAGCAAATGTAGTGGCTGACGCGCTGAGTAGGAAGGTGGCACATTCAGCAGCGCTAATCACCAAGCAGACCCCCTTACTCAGGGATTTTGAGAGAGCCGAGATTGCAGTCTCAGTAGGTGAGGTTACCGCACAGTTGGCTCAGTTGTCAGTTCAGCCAACCTTGAGGCAAAAGATCATCGCTGCTCAGCTGAATGATCCTTACTTGACAGAGAAGCGTCGTATGGTAGAGACAGAGCAAGGTGAAGACTTCTCCATATCCTCTGACGATGGCCTTATGTTTGAGGGACGCCTGTGTGTGCCGGAAGACAGCGCAGTTAAGACGGAGCTTTTGACTGAGGCTCACAGTTCCCCGTTTACCATGCACCCTGGGAGTACGAAGATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGGGGCATGAAGAGGGAAGTGGCAGACTTTGTCAGTAGGTGCTTGGTGTGCCAGCAGGTGAAGGCACCTAGGCAGCATCCAGCAGGGTTGTTGCAACCCTTGAGTGTGCCAGGACTCACGAAGTCGGCCCATTTCGTGCCAGGGAAGTCCACTTACACTGCCAACAGAGACGCTCGTTTCACATCGAAGTTCTGGAAGGGACTTCAACTTGCATTAGGTACGAGGCTGGACTTCAGCACGACATTCCACCCTCAGACTGATGGTCAGACAGAGAGATTGAACCAGATTTTGGAAGATATGCTGCGGGCCTGCGTGCTAGAGTTTTCAGGAAGTTGGGACTCCCATCTGCATCTGATGGAGTTTGCCTATAACAACAGCTACCAGGCTACTATCGGTATGGCACCGTTCGAGGCTCTGTATGGCAAGTGCTGTAGATCCCCTGTCTGCTGGGGCGAGGTTGGAGAGCAGAGGATGCTAGGCCCCGAGTTAGTGCAGACTACCAACGCAGCCATACAGAAGATCCGAGCTCGTATGCTGACAGCACAGAGCAGACAGAAGAGTTATGCTGATGTACGACGTAAGGACCTCGAGTTTGAAGTGGGAGATATGGTCTTTCTGAAGGTTGCACCCATGAAGGGTGTTCTGAGGTTCGCGAAGAAGGGGAAGCTGAGTCCACGCTTCGTAGGGCCGTTCGAGATACTGGAGCGGATTGGCCCCGTGGCTTATCGCTTGGCGCTACCCCCATCTTTTGCTGCAGTGCACGACGTATTCCATATCTCCATGCTGAGGAAATATGTCGCAGACCCTACACATGTGGTGGACTTCGAGCCACTGCAGATTAGCGAGAACTTGAGCTACGAGGAGCAGCCTGTCGAGGTCTTGGCAAGGGAGGTCAAGAAGCTTCGCAGTCGAGAAATTCCACTGGTCAAAATCCTTTGGCAGAACCATGGAGTGGAAGAGGCCACGTGGGAGAAAGAAGAGGACATGAGAGCCCAGTACCCCGAGCTGTTCGAGGATTAG

Protein sequence

MPPRRGARRGGGRGGRGAGRGQPEAPPAAPAVDPNAPVTQADLAAMEQRYQDMLQAALAPFLAAQQNQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRKDYFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADSSKAAGRGSALGQKRKVETQPDVVPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHTADVCPRKPFETTPPQPSASQQGRVYATTRQEAERAGTVVTACGFGGRTLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTEVRGRLLTYSQPVDPVDQEGNPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLTEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGLTKSAHFVPGKSTYTANRDARFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPLQISENLSYEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEATWEKEEDMRAQYPELFED

Homology

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BLAST of IVF0011547 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 1.2e-109
Identity = 274/921 (29.75%), Postives = 453/921 (49.19%), Query Frame = 0


Query: 493  IREPEVSLSSEPVVREYPDVFPD-ELPGLPPP-REVDFAIELEPGTAPISRAPYRMAPAE 552
            ++EPE+      + +E+ D+  +     LP P + ++F +EL      +    Y + P +
Sbjct: 369  VKEPEL----PDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGK 428

Query: 553  LKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPR 612
            ++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP 
Sbjct: 429  MQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPL 488

Query: 613  IDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAV 672
            I+ L  ++QG+T+F+K+DL+S YH +R+R GD  K AFR   G +E++VM +G++ APA 
Sbjct: 489  IEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAH 548

Query: 673  FMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFW 732
            F   +N +  +  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF 
Sbjct: 549  FQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFH 608

Query: 733  LRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPST--EVRGRL--LTY-----------SQ 792
              +V F+G+ +S +G +     I+ V  W +P    E+R  L  + Y           + 
Sbjct: 609  QSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTH 668

Query: 793  PVDPVDQEGNPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLM 852
            P++ + ++   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL 
Sbjct: 669  PLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLS 728

Query: 853  QQGK-----VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHK 912
            Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH+
Sbjct: 729  QKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHR 788

Query: 913  SLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQT 972
            +L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  
Sbjct: 789  NLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETE 848

Query: 973  PLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYL-----TEKRRMVETE 1032
            P+ +D E   I          + Q+S+    + +++    ND  L      E +R+ E  
Sbjct: 849  PIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEE-- 908

Query: 1033 QGEDFSISSDDGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYW 1092
                 +I   DGL+   +  + +P D+ +   ++ + H     +HPG   +   +   + 
Sbjct: 909  -----NIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFT 968

Query: 1093 WRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLS------------------------ 1152
            W+G+++++ ++V  C  CQ  K+    P G LQP+                         
Sbjct: 969  WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYN 1028

Query: 1153 -----VPGLTKSAHFVPGKSTYTANRDAR-----------------------FTSKFWKG 1212
                 V   +K A  VP   + TA + AR                       FTS+ WK 
Sbjct: 1029 ALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKD 1088

Query: 1213 LQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSY 1272
                    + FS  + PQTDGQTER NQ +E +LR        +W  H+ L++ +YNN+ 
Sbjct: 1089 FAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAI 1148

Query: 1273 QATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQK 1326
             +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K
Sbjct: 1149 HSATQMTPFEIVHRYSPALSPL---ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMK 1208

[Close]

BLAST of IVF0011547 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 1.2e-109
Identity = 274/921 (29.75%), Postives = 453/921 (49.19%), Query Frame = 0


Query: 493  IREPEVSLSSEPVVREYPDVFPD-ELPGLPPP-REVDFAIELEPGTAPISRAPYRMAPAE 552
            ++EPE+      + +E+ D+  +     LP P + ++F +EL      +    Y + P +
Sbjct: 369  VKEPEL----PDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGK 428

Query: 553  LKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPR 612
            ++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP 
Sbjct: 429  MQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPL 488

Query: 613  IDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAV 672
            I+ L  ++QG+T+F+K+DL+S YH +R+R GD  K AFR   G +E++VM +G++ APA 
Sbjct: 489  IEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAH 548

Query: 673  FMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFW 732
            F   +N +  +  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF 
Sbjct: 549  FQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFH 608

Query: 733  LRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPST--EVRGRL--LTY-----------SQ 792
              +V F+G+ +S +G +     I+ V  W +P    E+R  L  + Y           + 
Sbjct: 609  QSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTH 668

Query: 793  PVDPVDQEGNPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLM 852
            P++ + ++   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL 
Sbjct: 669  PLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLS 728

Query: 853  QQGK-----VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHK 912
            Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH+
Sbjct: 729  QKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHR 788

Query: 913  SLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQT 972
            +L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  
Sbjct: 789  NLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETE 848

Query: 973  PLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYL-----TEKRRMVETE 1032
            P+ +D E   I          + Q+S+    + +++    ND  L      E +R+ E  
Sbjct: 849  PIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEE-- 908

Query: 1033 QGEDFSISSDDGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYW 1092
                 +I   DGL+   +  + +P D+ +   ++ + H     +HPG   +   +   + 
Sbjct: 909  -----NIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFT 968

Query: 1093 WRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLS------------------------ 1152
            W+G+++++ ++V  C  CQ  K+    P G LQP+                         
Sbjct: 969  WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYN 1028

Query: 1153 -----VPGLTKSAHFVPGKSTYTANRDAR-----------------------FTSKFWKG 1212
                 V   +K A  VP   + TA + AR                       FTS+ WK 
Sbjct: 1029 ALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKD 1088

Query: 1213 LQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSY 1272
                    + FS  + PQTDGQTER NQ +E +LR        +W  H+ L++ +YNN+ 
Sbjct: 1089 FAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAI 1148

Query: 1273 QATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQK 1326
             +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K
Sbjct: 1149 HSATQMTPFEIVHRYSPALSPL---ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMK 1208

[Close]

BLAST of IVF0011547 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 1.2e-109
Identity = 274/921 (29.75%), Postives = 453/921 (49.19%), Query Frame = 0


Query: 493  IREPEVSLSSEPVVREYPDVFPD-ELPGLPPP-REVDFAIELEPGTAPISRAPYRMAPAE 552
            ++EPE+      + +E+ D+  +     LP P + ++F +EL      +    Y + P +
Sbjct: 369  VKEPEL----PDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGK 428

Query: 553  LKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPR 612
            ++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP 
Sbjct: 429  MQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPL 488

Query: 613  IDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAV 672
            I+ L  ++QG+T+F+K+DL+S YH +R+R GD  K AFR   G +E++VM +G++ APA 
Sbjct: 489  IEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAH 548

Query: 673  FMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFW 732
            F   +N +  +  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF 
Sbjct: 549  FQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFH 608

Query: 733  LRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPST--EVRGRL--LTY-----------SQ 792
              +V F+G+ +S +G +     I+ V  W +P    E+R  L  + Y           + 
Sbjct: 609  QSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTH 668

Query: 793  PVDPVDQEGNPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLM 852
            P++ + ++   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL 
Sbjct: 669  PLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLS 728

Query: 853  QQGK-----VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHK 912
            Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH+
Sbjct: 729  QKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHR 788

Query: 913  SLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQT 972
            +L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  
Sbjct: 789  NLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETE 848

Query: 973  PLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYL-----TEKRRMVETE 1032
            P+ +D E   I          + Q+S+    + +++    ND  L      E +R+ E  
Sbjct: 849  PIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEE-- 908

Query: 1033 QGEDFSISSDDGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYW 1092
                 +I   DGL+   +  + +P D+ +   ++ + H     +HPG   +   +   + 
Sbjct: 909  -----NIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFT 968

Query: 1093 WRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLS------------------------ 1152
            W+G+++++ ++V  C  CQ  K+    P G LQP+                         
Sbjct: 969  WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYN 1028

Query: 1153 -----VPGLTKSAHFVPGKSTYTANRDAR-----------------------FTSKFWKG 1212
                 V   +K A  VP   + TA + AR                       FTS+ WK 
Sbjct: 1029 ALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKD 1088

Query: 1213 LQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSY 1272
                    + FS  + PQTDGQTER NQ +E +LR        +W  H+ L++ +YNN+ 
Sbjct: 1089 FAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAI 1148

Query: 1273 QATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQK 1326
             +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K
Sbjct: 1149 HSATQMTPFEIVHRYSPALSPL---ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMK 1208

[Close]

BLAST of IVF0011547 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 1.2e-109
Identity = 274/921 (29.75%), Postives = 453/921 (49.19%), Query Frame = 0


Query: 493  IREPEVSLSSEPVVREYPDVFPD-ELPGLPPP-REVDFAIELEPGTAPISRAPYRMAPAE 552
            ++EPE+      + +E+ D+  +     LP P + ++F +EL      +    Y + P +
Sbjct: 369  VKEPEL----PDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGK 428

Query: 553  LKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPR 612
            ++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP 
Sbjct: 429  MQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPL 488

Query: 613  IDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAV 672
            I+ L  ++QG+T+F+K+DL+S YH +R+R GD  K AFR   G +E++VM +G++ APA 
Sbjct: 489  IEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAH 548

Query: 673  FMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFW 732
            F   +N +  +  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF 
Sbjct: 549  FQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFH 608

Query: 733  LRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPST--EVRGRL--LTY-----------SQ 792
              +V F+G+ +S +G +     I+ V  W +P    E+R  L  + Y           + 
Sbjct: 609  QSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTH 668

Query: 793  PVDPVDQEGNPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLM 852
            P++ + ++   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL 
Sbjct: 669  PLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLS 728

Query: 853  QQGK-----VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHK 912
            Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH+
Sbjct: 729  QKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHR 788

Query: 913  SLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQT 972
            +L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  
Sbjct: 789  NLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETE 848

Query: 973  PLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYL-----TEKRRMVETE 1032
            P+ +D E   I          + Q+S+    + +++    ND  L      E +R+ E  
Sbjct: 849  PIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEE-- 908

Query: 1033 QGEDFSISSDDGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYW 1092
                 +I   DGL+   +  + +P D+ +   ++ + H     +HPG   +   +   + 
Sbjct: 909  -----NIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFT 968

Query: 1093 WRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLS------------------------ 1152
            W+G+++++ ++V  C  CQ  K+    P G LQP+                         
Sbjct: 969  WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYN 1028

Query: 1153 -----VPGLTKSAHFVPGKSTYTANRDAR-----------------------FTSKFWKG 1212
                 V   +K A  VP   + TA + AR                       FTS+ WK 
Sbjct: 1029 ALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKD 1088

Query: 1213 LQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSY 1272
                    + FS  + PQTDGQTER NQ +E +LR        +W  H+ L++ +YNN+ 
Sbjct: 1089 FAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAI 1148

Query: 1273 QATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQK 1326
             +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K
Sbjct: 1149 HSATQMTPFEIVHRYSPALSPL---ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMK 1208

[Close]

BLAST of IVF0011547 vs. ExPASy Swiss-Prot
Match: P0CT37 (Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-4 PE=3 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 1.2e-109
Identity = 274/921 (29.75%), Postives = 453/921 (49.19%), Query Frame = 0


Query: 493  IREPEVSLSSEPVVREYPDVFPD-ELPGLPPP-REVDFAIELEPGTAPISRAPYRMAPAE 552
            ++EPE+      + +E+ D+  +     LP P + ++F +EL      +    Y + P +
Sbjct: 369  VKEPEL----PDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGK 428

Query: 553  LKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPR 612
            ++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP 
Sbjct: 429  MQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPL 488

Query: 613  IDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAV 672
            I+ L  ++QG+T+F+K+DL+S YH +R+R GD  K AFR   G +E++VM +G++ APA 
Sbjct: 489  IEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAH 548

Query: 673  FMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFW 732
            F   +N +  +  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF 
Sbjct: 549  FQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFH 608

Query: 733  LRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPST--EVRGRL--LTY-----------SQ 792
              +V F+G+ +S +G +     I+ V  W +P    E+R  L  + Y           + 
Sbjct: 609  QSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTH 668

Query: 793  PVDPVDQEGNPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLM 852
            P++ + ++   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL 
Sbjct: 669  PLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLS 728

Query: 853  QQGK-----VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHK 912
            Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH+
Sbjct: 729  QKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHR 788

Query: 913  SLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQT 972
            +L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  
Sbjct: 789  NLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETE 848

Query: 973  PLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYL-----TEKRRMVETE 1032
            P+ +D E   I          + Q+S+    + +++    ND  L      E +R+ E  
Sbjct: 849  PIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEE-- 908

Query: 1033 QGEDFSISSDDGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYW 1092
                 +I   DGL+   +  + +P D+ +   ++ + H     +HPG   +   +   + 
Sbjct: 909  -----NIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFT 968

Query: 1093 WRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLS------------------------ 1152
            W+G+++++ ++V  C  CQ  K+    P G LQP+                         
Sbjct: 969  WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYN 1028

Query: 1153 -----VPGLTKSAHFVPGKSTYTANRDAR-----------------------FTSKFWKG 1212
                 V   +K A  VP   + TA + AR                       FTS+ WK 
Sbjct: 1029 ALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKD 1088

Query: 1213 LQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSY 1272
                    + FS  + PQTDGQTER NQ +E +LR        +W  H+ L++ +YNN+ 
Sbjct: 1089 FAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAI 1148

Query: 1273 QATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQK 1326
             +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K
Sbjct: 1149 HSATQMTPFEIVHRYSPALSPL---ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMK 1208

[Close]

BLAST of IVF0011547 vs. ExPASy TrEMBL
Match: A0A5A7SIJ5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G003210 PE=4 SV=1)

HSP 1 Score: 2614.7 bits (6776), Expect = 0.0e+00
Identity = 1351/1520 (88.88%), Postives = 1370/1520 (90.13%), Query Frame = 0


Query: 1    MPPRRGARRGGGRGGRGAGRGQPEAPPAAPAVDPNAPVTQADLAAMEQRYQDMLQAALAP 60
            MPPRRGARRGGGRGGRGAGRGQPEA PAAPAVDPNAPVTQADLAAMEQRYQDMLQAALAP
Sbjct: 1    MPPRRGARRGGGRGGRGAGRGQPEAQPAAPAVDPNAPVTQADLAAMEQRYQDMLQAALAP 60

Query: 61   FLAAQQNQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRK---------------- 120
            FLA QQNQAAPVQAQAVAPPAPEEAQPVPVQLSAEAK LRDF+K                
Sbjct: 61   FLATQQNQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKRLRDFKKYNPKTFDGSMDNPTKA 120

Query: 121  --------DYFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENF 180
                      F+YMKC EDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENF
Sbjct: 121  QMWLTSIETIFQYMKCSEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENF 180

Query: 181  YAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLR 240
            YAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLR
Sbjct: 181  YAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLR 240

Query: 241  LDLQGIVRALRPATHADALRIALDLSLPERADSSKAAGRGSALGQKRKVETQPDVVPQRT 300
            LDLQGIVRALRPATHADALRIALDLSLPERADSSKAAGRGSALGQKRKVETQPD+VPQRT
Sbjct: 241  LDLQGIVRALRPATHADALRIALDLSLPERADSSKAAGRGSALGQKRKVETQPDIVPQRT 300

Query: 301  LRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHTADVCPR 360
            LRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHTADVCPR
Sbjct: 301  LRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHTADVCPR 360

Query: 361  KPFETTPPQPSASQQGRVYATTRQEAERAGTVVTA------------------------- 420
            KPFETTPPQPSA QQGRV+ATTRQEAERAGTVVT                          
Sbjct: 361  KPFETTPPQPSAFQQGRVFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSV 420

Query: 421  ----CGFGGRTLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVIL 480
                 G     LGSVLSVSTPSGEVLLSKEQIKACRVEI NRMLDVTLLVLDMQDFDVIL
Sbjct: 421  FVRHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEITNRMLDVTLLVLDMQDFDVIL 480

Query: 481  GMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLLSQGTWGIL 540
            GMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLLSQGTWGIL
Sbjct: 481  GMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLLSQGTWGIL 540

Query: 541  ASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMA 600
            ASVVD+REPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMA
Sbjct: 541  ASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMA 600

Query: 601  PAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYP 660
            PAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYP
Sbjct: 601  PAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYP 660

Query: 661  LPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNA 720
            LPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNA
Sbjct: 661  LPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNA 720

Query: 721  PAVFMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKC 780
            PAVFMDLMN+VFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKC
Sbjct: 721  PAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKC 780

Query: 781  EFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPST--EVRGRL-------------LT 840
            EFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW RPST  E+R  L               
Sbjct: 781  EFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSR 840

Query: 841  YSQPVDPVDQEGNPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGC 900
             + P+  + ++G PFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGC
Sbjct: 841  IASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGC 900

Query: 901  VLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKY 960
            VLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKY
Sbjct: 901  VLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKY 960

Query: 961  FFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDF 1020
            FFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDF
Sbjct: 961  FFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDF 1020

Query: 1021 ERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLTEKRRMVETEQGEDFSISSDD 1080
            ERAEIAVSVGEVTAQLAQL+VQPTLRQKIIAAQL+DPYL EKRR+VETEQGE FSISSDD
Sbjct: 1021 ERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLDDPYLAEKRRVVETEQGEGFSISSDD 1080

Query: 1081 GLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVS 1140
            GLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKR+VADFVS
Sbjct: 1081 GLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVS 1140

Query: 1141 RCLVCQQVKAPRQHPAGLLQPLSVPG------------------------------LTKS 1200
            RCLVCQQVKAPRQHPAGLLQPLSVPG                              LTKS
Sbjct: 1141 RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKS 1200

Query: 1201 AHFVPGKSTYTA-----------------------NRDARFTSKFWKGLQLALGTRLDFS 1260
            AHFVPGKSTYTA                       +RDARFTSKFWKGLQ+ALGTRLDFS
Sbjct: 1201 AHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQIALGTRLDFS 1260

Query: 1261 TTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEAL 1320
            T FHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEAL
Sbjct: 1261 TAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEAL 1320

Query: 1321 YGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFE 1380
            YGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFE
Sbjct: 1321 YGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFE 1380

Query: 1381 VGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHI 1400
            VGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHI
Sbjct: 1381 VGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHI 1440

[Close]

BLAST of IVF0011547 vs. ExPASy TrEMBL
Match: A0A5D3CQB5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001420 PE=4 SV=1)

HSP 1 Score: 2612.8 bits (6771), Expect = 0.0e+00
Identity = 1353/1534 (88.20%), Postives = 1373/1534 (89.50%), Query Frame = 0


Query: 1    MPPRRGARRGGGRGGRGAGRGQPEAPPAAPAVDPNAPVTQADLAAMEQRYQDMLQAALAP 60
            MPPRRG RRGGGRGGRGAGRGQPEAPP APAVDPNAPVTQADLAAMEQRYQDMLQAALAP
Sbjct: 1    MPPRRGTRRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRYQDMLQAALAP 60

Query: 61   FLAAQQN--------------QAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRK-- 120
            FLAAQQN              QAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRK  
Sbjct: 61   FLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRKYN 120

Query: 121  ----------------------DYFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGG 180
                                    FRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGG
Sbjct: 121  PKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGG 180

Query: 181  DVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVR 240
            DVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVR
Sbjct: 181  DVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVR 240

Query: 241  DEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADSSKAAGRGSALGQK 300
            DEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERAD+SKAAGRGSALGQK
Sbjct: 241  DEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQK 300

Query: 301  RKVETQPDVVPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCF 360
            RKVETQPDVVPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCF
Sbjct: 301  RKVETQPDVVPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCF 360

Query: 361  RCRQPGHTADVCPRKPFETTPPQPSASQQGRVYATTRQEAERAGTVVTA----------- 420
            RCRQPGHTAD+CPRKPFETTPPQPSA+QQGRV+ATTRQEAERAGTVVT            
Sbjct: 361  RCRQPGHTADMCPRKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPILGHYAFV 420

Query: 421  ------------------CGFGGRTLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDV 480
                               G     LGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDV
Sbjct: 421  LFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDV 480

Query: 481  TLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAM 540
            TLLVLDMQDFDVILGMDWLSANHANIDC+GKEVVFNPPS ASFKFRGAGMVCIPKVISAM
Sbjct: 481  TLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAM 540

Query: 541  KASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELE 600
            KASKLLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELE
Sbjct: 541  KASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELE 600

Query: 601  PGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCID 660
            PGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCID
Sbjct: 601  PGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCID 660

Query: 661  YRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYG 720
            YRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYG
Sbjct: 661  YRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYG 720

Query: 721  HYEFVVMSFGLTNAPAVFMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLE 780
            HYEFVVMSFGLTNAPAVFMDLMN+VFK+FLDSFVIVFIDDILIYSKTEAEHEEHLHQVLE
Sbjct: 721  HYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLE 780

Query: 781  TLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPST--EVRGRL- 840
            TLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW RPST  E+R  L 
Sbjct: 781  TLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLG 840

Query: 841  ------------LTYSQPVDPVDQEGNPFVWSPACERSFQELKQKLVTAPVLTVPDGSGN 900
                           + P+  + ++G PFVWSPACERSFQELKQKLVTAPVLTVPDGSGN
Sbjct: 841  LAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGN 900

Query: 901  FVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG 960
            FVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG
Sbjct: 901  FVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG 960

Query: 961  EKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHS 1020
            EKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHS
Sbjct: 961  EKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHS 1020

Query: 1021 AALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLTEKRRMV 1080
            AALITKQTPLLRDFERAEIAVSVGEVTAQLAQL+VQPTLRQKIIAAQL+DPYL EKRR+V
Sbjct: 1021 AALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLDDPYLAEKRRVV 1080

Query: 1081 ETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVY 1140
            ETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVY
Sbjct: 1081 ETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVY 1140

Query: 1141 WWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPG-------------------- 1200
            WWRGMKR+VADFVSRCLVCQQVKAPRQHPAGLLQPLSVPG                    
Sbjct: 1141 WWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRG 1200

Query: 1201 ----------LTKSAHFVPGKSTYTA-----------------------NRDARFTSKFW 1260
                      LTKSAHFVPGKSTYTA                       +RDARFTSKFW
Sbjct: 1201 YTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFW 1260

Query: 1261 KGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNN 1320
            KGLQLALGTRLDFST FHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNN
Sbjct: 1261 KGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNN 1320

Query: 1321 SYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ 1380
            SYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ
Sbjct: 1321 SYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ 1380

Query: 1381 KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLA 1400
            KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLA
Sbjct: 1381 KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLA 1440

[Close]

BLAST of IVF0011547 vs. ExPASy TrEMBL
Match: A0A5A7TEQ2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00410 PE=4 SV=1)

HSP 1 Score: 2611.3 bits (6767), Expect = 0.0e+00
Identity = 1352/1534 (88.14%), Postives = 1372/1534 (89.44%), Query Frame = 0


Query: 1    MPPRRGARRGGGRGGRGAGRGQPEAPPAAPAVDPNAPVTQADLAAMEQRYQDMLQAALAP 60
            MPPRRG RRGGGRGGRGAGRGQPEAPP APAVDPNAPVTQADLAAMEQRYQDMLQAALAP
Sbjct: 1    MPPRRGTRRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRYQDMLQAALAP 60

Query: 61   FLAAQQN--------------QAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRK-- 120
            FLAAQQN              QAAPVQAQAVAPPAPEEAQPVPVQLS EAKHLRDFRK  
Sbjct: 61   FLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSTEAKHLRDFRKYN 120

Query: 121  ----------------------DYFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGG 180
                                    FRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGG
Sbjct: 121  PKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGG 180

Query: 181  DVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVR 240
            DVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVR
Sbjct: 181  DVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVR 240

Query: 241  DEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADSSKAAGRGSALGQK 300
            DEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERAD+SKAAGRGSALGQK
Sbjct: 241  DEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQK 300

Query: 301  RKVETQPDVVPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCF 360
            RKVETQPDVVPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCF
Sbjct: 301  RKVETQPDVVPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCF 360

Query: 361  RCRQPGHTADVCPRKPFETTPPQPSASQQGRVYATTRQEAERAGTVVTA----------- 420
            RCRQPGHTAD+CPRKPFETTPPQPSA+QQGRV+ATTRQEAERAGTVVT            
Sbjct: 361  RCRQPGHTADMCPRKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPILGHYAFV 420

Query: 421  ------------------CGFGGRTLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDV 480
                               G     LGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDV
Sbjct: 421  LFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDV 480

Query: 481  TLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAM 540
            TLLVLDMQDFDVILGMDWLSANHANIDC+GKEVVFNPPS ASFKFRGAGMVCIPKVISAM
Sbjct: 481  TLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAM 540

Query: 541  KASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELE 600
            KASKLLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELE
Sbjct: 541  KASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELE 600

Query: 601  PGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCID 660
            PGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCID
Sbjct: 601  PGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCID 660

Query: 661  YRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYG 720
            YRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYG
Sbjct: 661  YRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYG 720

Query: 721  HYEFVVMSFGLTNAPAVFMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLE 780
            HYEFVVMSFGLTNAPAVFMDLMN+VFK+FLDSFVIVFIDDILIYSKTEAEHEEHLHQVLE
Sbjct: 721  HYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLE 780

Query: 781  TLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPST--EVRGRL- 840
            TLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW RPST  E+R  L 
Sbjct: 781  TLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLG 840

Query: 841  ------------LTYSQPVDPVDQEGNPFVWSPACERSFQELKQKLVTAPVLTVPDGSGN 900
                           + P+  + ++G PFVWSPACERSFQELKQKLVTAPVLTVPDGSGN
Sbjct: 841  LAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGN 900

Query: 901  FVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG 960
            FVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG
Sbjct: 901  FVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG 960

Query: 961  EKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHS 1020
            EKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHS
Sbjct: 961  EKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHS 1020

Query: 1021 AALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLTEKRRMV 1080
            AALITKQTPLLRDFERAEIAVSVGEVTAQLAQL+VQPTLRQKIIAAQL+DPYL EKRR+V
Sbjct: 1021 AALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLDDPYLAEKRRVV 1080

Query: 1081 ETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVY 1140
            ETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVY
Sbjct: 1081 ETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVY 1140

Query: 1141 WWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPG-------------------- 1200
            WWRGMKR+VADFVSRCLVCQQVKAPRQHPAGLLQPLSVPG                    
Sbjct: 1141 WWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRG 1200

Query: 1201 ----------LTKSAHFVPGKSTYTA-----------------------NRDARFTSKFW 1260
                      LTKSAHFVPGKSTYTA                       +RDARFTSKFW
Sbjct: 1201 YTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFW 1260

Query: 1261 KGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNN 1320
            KGLQLALGTRLDFST FHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNN
Sbjct: 1261 KGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNN 1320

Query: 1321 SYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ 1380
            SYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ
Sbjct: 1321 SYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ 1380

Query: 1381 KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLA 1400
            KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLA
Sbjct: 1381 KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLA 1440

[Close]

BLAST of IVF0011547 vs. ExPASy TrEMBL
Match: A0A5A7TSL0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold191G001340 PE=4 SV=1)

HSP 1 Score: 2611.3 bits (6767), Expect = 0.0e+00
Identity = 1352/1534 (88.14%), Postives = 1372/1534 (89.44%), Query Frame = 0


Query: 1    MPPRRGARRGGGRGGRGAGRGQPEAPPAAPAVDPNAPVTQADLAAMEQRYQDMLQAALAP 60
            MPPRRG RRGGGRGGRGAGRGQPEAPP APAVDPNAPVTQADLAAMEQRYQDMLQAALAP
Sbjct: 1    MPPRRGTRRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRYQDMLQAALAP 60

Query: 61   FLAAQQN--------------QAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRK-- 120
            FLAAQQN              QAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRK  
Sbjct: 61   FLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRKYN 120

Query: 121  ----------------------DYFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGG 180
                                    FRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGG
Sbjct: 121  PKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGG 180

Query: 181  DVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVR 240
            DVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVR
Sbjct: 181  DVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVR 240

Query: 241  DEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADSSKAAGRGSALGQK 300
            DEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERAD+SKAAGRGSALGQK
Sbjct: 241  DEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQK 300

Query: 301  RKVETQPDVVPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCF 360
            RKVETQPDV PQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCF
Sbjct: 301  RKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCF 360

Query: 361  RCRQPGHTADVCPRKPFETTPPQPSASQQGRVYATTRQEAERAGTVVTA----------- 420
            RCRQPGHTAD+CPRKPFETTPPQPSA+QQGRV+ATTRQEAERAGTVVT            
Sbjct: 361  RCRQPGHTADMCPRKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPILGHYAFV 420

Query: 421  ------------------CGFGGRTLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDV 480
                               G     LGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDV
Sbjct: 421  LFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDV 480

Query: 481  TLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAM 540
            TLLVLDMQDFDVILGMDWLSANHANIDC+GKEVVFNPPS ASFKFRGAGMVCIPKVISAM
Sbjct: 481  TLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAM 540

Query: 541  KASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELE 600
            KASKLLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELE
Sbjct: 541  KASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELE 600

Query: 601  PGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCID 660
            PGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCID
Sbjct: 601  PGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCID 660

Query: 661  YRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYG 720
            YRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYG
Sbjct: 661  YRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYG 720

Query: 721  HYEFVVMSFGLTNAPAVFMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLE 780
            HYEFVVMSFGLTNAPAVFMDLMN+VFK+FLDSFVIVFIDDILIYSKTEAEHEEHLHQVLE
Sbjct: 721  HYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLE 780

Query: 781  TLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPST--EVRGRL- 840
            TLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW RPST  E+R  L 
Sbjct: 781  TLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLG 840

Query: 841  ------------LTYSQPVDPVDQEGNPFVWSPACERSFQELKQKLVTAPVLTVPDGSGN 900
                           + P+  + ++G PFVWSPACERSFQELKQKLVTAPVLTVPDGSGN
Sbjct: 841  LAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGN 900

Query: 901  FVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG 960
            FVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG
Sbjct: 901  FVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG 960

Query: 961  EKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHS 1020
            EKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHS
Sbjct: 961  EKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHS 1020

Query: 1021 AALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLTEKRRMV 1080
            AALITKQTPLLRDFERAEIAVSVGEVTAQLAQL+VQPTLRQKIIAAQL+DPYL EKRR+V
Sbjct: 1021 AALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLDDPYLAEKRRVV 1080

Query: 1081 ETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVY 1140
            ETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVY
Sbjct: 1081 ETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVY 1140

Query: 1141 WWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPG-------------------- 1200
            WWRGMKR+VADFVSRCLVCQQVKAPRQHPAGLLQPLSVPG                    
Sbjct: 1141 WWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRG 1200

Query: 1201 ----------LTKSAHFVPGKSTYTA-----------------------NRDARFTSKFW 1260
                      LTKSAHFVPGKSTYTA                       +RDARFTSKFW
Sbjct: 1201 YTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFW 1260

Query: 1261 KGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNN 1320
            KGLQLALGTRLDFST FHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNN
Sbjct: 1261 KGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNN 1320

Query: 1321 SYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ 1380
            SYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ
Sbjct: 1321 SYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ 1380

Query: 1381 KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLA 1400
            KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLA
Sbjct: 1381 KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLA 1440

[Close]

BLAST of IVF0011547 vs. ExPASy TrEMBL
Match: A0A5D3DY07 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00520 PE=4 SV=1)

HSP 1 Score: 2611.3 bits (6767), Expect = 0.0e+00
Identity = 1352/1534 (88.14%), Postives = 1372/1534 (89.44%), Query Frame = 0


Query: 1    MPPRRGARRGGGRGGRGAGRGQPEAPPAAPAVDPNAPVTQADLAAMEQRYQDMLQAALAP 60
            MPPRRG RRGGGRGGRGAGRGQPEAPP APAVDPNAPVTQADLAAMEQRYQDMLQAALAP
Sbjct: 352  MPPRRGTRRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRYQDMLQAALAP 411

Query: 61   FLAAQQN--------------QAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRK-- 120
            FLAAQQN              QAAPVQAQAVAPPAPEEAQPVPVQLS EAKHLRDFRK  
Sbjct: 412  FLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSTEAKHLRDFRKYN 471

Query: 121  ----------------------DYFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGG 180
                                    FRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGG
Sbjct: 472  PKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGG 531

Query: 181  DVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVR 240
            DVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVR
Sbjct: 532  DVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVR 591

Query: 241  DEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADSSKAAGRGSALGQK 300
            DEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERAD+SKAAGRGSALGQK
Sbjct: 592  DEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQK 651

Query: 301  RKVETQPDVVPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCF 360
            RKVETQPDVVPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCF
Sbjct: 652  RKVETQPDVVPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCF 711

Query: 361  RCRQPGHTADVCPRKPFETTPPQPSASQQGRVYATTRQEAERAGTVVTA----------- 420
            RCRQPGHTAD+CPRKPFETTPPQPSA+QQGRV+ATTRQEAERAGTVVT            
Sbjct: 712  RCRQPGHTADMCPRKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPILGHYAFV 771

Query: 421  ------------------CGFGGRTLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDV 480
                               G     LGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDV
Sbjct: 772  LFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDV 831

Query: 481  TLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAM 540
            TLLVLDMQDFDVILGMDWLSANHANIDC+GKEVVFNPPS ASFKFRGAGMVCIPKVISAM
Sbjct: 832  TLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAM 891

Query: 541  KASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELE 600
            KASKLLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELE
Sbjct: 892  KASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELE 951

Query: 601  PGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCID 660
            PGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCID
Sbjct: 952  PGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCID 1011

Query: 661  YRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYG 720
            YRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYG
Sbjct: 1012 YRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYG 1071

Query: 721  HYEFVVMSFGLTNAPAVFMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLE 780
            HYEFVVMSFGLTNAPAVFMDLMN+VFK+FLDSFVIVFIDDILIYSKTEAEHEEHLHQVLE
Sbjct: 1072 HYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLE 1131

Query: 781  TLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPST--EVRGRL- 840
            TLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW RPST  E+R  L 
Sbjct: 1132 TLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLG 1191

Query: 841  ------------LTYSQPVDPVDQEGNPFVWSPACERSFQELKQKLVTAPVLTVPDGSGN 900
                           + P+  + ++G PFVWSPACERSFQELKQKLVTAPVLTVPDGSGN
Sbjct: 1192 LAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGN 1251

Query: 901  FVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG 960
            FVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG
Sbjct: 1252 FVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG 1311

Query: 961  EKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHS 1020
            EKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHS
Sbjct: 1312 EKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHS 1371

Query: 1021 AALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLTEKRRMV 1080
            AALITKQTPLLRDFERAEIAVSVGEVTAQLAQL+VQPTLRQKIIAAQL+DPYL EKRR+V
Sbjct: 1372 AALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLDDPYLAEKRRVV 1431

Query: 1081 ETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVY 1140
            ETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVY
Sbjct: 1432 ETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVY 1491

Query: 1141 WWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPG-------------------- 1200
            WWRGMKR+VADFVSRCLVCQQVKAPRQHPAGLLQPLSVPG                    
Sbjct: 1492 WWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRG 1551

Query: 1201 ----------LTKSAHFVPGKSTYTA-----------------------NRDARFTSKFW 1260
                      LTKSAHFVPGKSTYTA                       +RDARFTSKFW
Sbjct: 1552 YTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFW 1611

Query: 1261 KGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNN 1320
            KGLQLALGTRLDFST FHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNN
Sbjct: 1612 KGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNN 1671

Query: 1321 SYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ 1380
            SYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ
Sbjct: 1672 SYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ 1731

Query: 1381 KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLA 1400
            KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLA
Sbjct: 1732 KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLA 1791

[Close]

BLAST of IVF0011547 vs. NCBI nr
Match: KAA0025998.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2610 bits (6764), Expect = 0.0
Identity = 1351/1520 (88.88%), Postives = 1370/1520 (90.13%), Query Frame = 0


Query: 1    MPPRRGARRGGGRGGRGAGRGQPEAPPAAPAVDPNAPVTQADLAAMEQRYQDMLQAALAP 60
            MPPRRGARRGGGRGGRGAGRGQPEA PAAPAVDPNAPVTQADLAAMEQRYQDMLQAALAP
Sbjct: 1    MPPRRGARRGGGRGGRGAGRGQPEAQPAAPAVDPNAPVTQADLAAMEQRYQDMLQAALAP 60

Query: 61   FLAAQQNQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRK---------------- 120
            FLA QQNQAAPVQAQAVAPPAPEEAQPVPVQLSAEAK LRDF+K                
Sbjct: 61   FLATQQNQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKRLRDFKKYNPKTFDGSMDNPTKA 120

Query: 121  --------DYFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENF 180
                      F+YMKC EDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENF
Sbjct: 121  QMWLTSIETIFQYMKCSEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENF 180

Query: 181  YAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLR 240
            YAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLR
Sbjct: 181  YAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLR 240

Query: 241  LDLQGIVRALRPATHADALRIALDLSLPERADSSKAAGRGSALGQKRKVETQPDVVPQRT 300
            LDLQGIVRALRPATHADALRIALDLSLPERADSSKAAGRGSALGQKRKVETQPD+VPQRT
Sbjct: 241  LDLQGIVRALRPATHADALRIALDLSLPERADSSKAAGRGSALGQKRKVETQPDIVPQRT 300

Query: 301  LRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHTADVCPR 360
            LRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHTADVCPR
Sbjct: 301  LRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHTADVCPR 360

Query: 361  KPFETTPPQPSASQQGRVYATTRQEAERAGTVVTAC------------------------ 420
            KPFETTPPQPSA QQGRV+ATTRQEAERAGTVVT                          
Sbjct: 361  KPFETTPPQPSAFQQGRVFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSV 420

Query: 421  -----GFGGRTLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVIL 480
                 G     LGSVLSVSTPSGEVLLSKEQIKACRVEI NRMLDVTLLVLDMQDFDVIL
Sbjct: 421  FVRHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEITNRMLDVTLLVLDMQDFDVIL 480

Query: 481  GMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLLSQGTWGIL 540
            GMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLLSQGTWGIL
Sbjct: 481  GMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLLSQGTWGIL 540

Query: 541  ASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMA 600
            ASVVD+REPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMA
Sbjct: 541  ASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMA 600

Query: 601  PAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYP 660
            PAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYP
Sbjct: 601  PAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYP 660

Query: 661  LPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNA 720
            LPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNA
Sbjct: 661  LPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNA 720

Query: 721  PAVFMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKC 780
            PAVFMDLMN+VFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKC
Sbjct: 721  PAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKC 780

Query: 781  EFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPST--EVRGRL-------------LT 840
            EFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW RPST  E+R  L               
Sbjct: 781  EFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSR 840

Query: 841  YSQPVDPVDQEGNPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGC 900
             + P+  + ++G PFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGC
Sbjct: 841  IASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGC 900

Query: 901  VLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKY 960
            VLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKY
Sbjct: 901  VLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKY 960

Query: 961  FFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDF 1020
            FFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDF
Sbjct: 961  FFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDF 1020

Query: 1021 ERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLTEKRRMVETEQGEDFSISSDD 1080
            ERAEIAVSVGEVTAQLAQL+VQPTLRQKIIAAQL+DPYL EKRR+VETEQGE FSISSDD
Sbjct: 1021 ERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLDDPYLAEKRRVVETEQGEGFSISSDD 1080

Query: 1081 GLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVS 1140
            GLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKR+VADFVS
Sbjct: 1081 GLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVS 1140

Query: 1141 RCLVCQQVKAPRQHPAGLLQPLSVPG------------------------------LTKS 1200
            RCLVCQQVKAPRQHPAGLLQPLSVPG                              LTKS
Sbjct: 1141 RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKS 1200

Query: 1201 AHFVPGKSTYTAN-----------------------RDARFTSKFWKGLQLALGTRLDFS 1260
            AHFVPGKSTYTA+                       RDARFTSKFWKGLQ+ALGTRLDFS
Sbjct: 1201 AHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQIALGTRLDFS 1260

Query: 1261 TTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEAL 1320
            T FHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEAL
Sbjct: 1261 TAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEAL 1320

Query: 1321 YGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFE 1380
            YGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFE
Sbjct: 1321 YGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFE 1380

Query: 1381 VGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHI 1399
            VGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHI
Sbjct: 1381 VGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHI 1440

[Close]

BLAST of IVF0011547 vs. NCBI nr
Match: TYJ95850.1 (pol protein [Cucumis melo var. makuwa] >TYJ99649.1 pol protein [Cucumis melo var. makuwa] >TYK03350.1 pol protein [Cucumis melo var. makuwa] >TYK07425.1 pol protein [Cucumis melo var. makuwa] >TYK08707.1 pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2608 bits (6759), Expect = 0.0
Identity = 1353/1534 (88.20%), Postives = 1373/1534 (89.50%), Query Frame = 0


Query: 1    MPPRRGARRGGGRGGRGAGRGQPEAPPAAPAVDPNAPVTQADLAAMEQRYQDMLQAALAP 60
            MPPRRG RRGGGRGGRGAGRGQPEAPP APAVDPNAPVTQADLAAMEQRYQDMLQAALAP
Sbjct: 1    MPPRRGTRRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRYQDMLQAALAP 60

Query: 61   FLAAQQNQAAPVQA--------------QAVAPPAPEEAQPVPVQLSAEAKHLRDFRK-- 120
            FLAAQQNQAAPVQA              QAVAPPAPEEAQPVPVQLSAEAKHLRDFRK  
Sbjct: 61   FLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRKYN 120

Query: 121  ----------------------DYFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGG 180
                                    FRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGG
Sbjct: 121  PKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGG 180

Query: 181  DVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVR 240
            DVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVR
Sbjct: 181  DVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVR 240

Query: 241  DEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADSSKAAGRGSALGQK 300
            DEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERAD+SKAAGRGSALGQK
Sbjct: 241  DEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQK 300

Query: 301  RKVETQPDVVPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCF 360
            RKVETQPDVVPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCF
Sbjct: 301  RKVETQPDVVPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCF 360

Query: 361  RCRQPGHTADVCPRKPFETTPPQPSASQQGRVYATTRQEAERAGTVVTAC---------- 420
            RCRQPGHTAD+CPRKPFETTPPQPSA+QQGRV+ATTRQEAERAGTVVT            
Sbjct: 361  RCRQPGHTADMCPRKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPILGHYAFV 420

Query: 421  -------------------GFGGRTLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDV 480
                               G     LGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDV
Sbjct: 421  LFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDV 480

Query: 481  TLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAM 540
            TLLVLDMQDFDVILGMDWLSANHANIDC+GKEVVFNPPS ASFKFRGAGMVCIPKVISAM
Sbjct: 481  TLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAM 540

Query: 541  KASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELE 600
            KASKLLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELE
Sbjct: 541  KASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELE 600

Query: 601  PGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCID 660
            PGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCID
Sbjct: 601  PGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCID 660

Query: 661  YRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYG 720
            YRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYG
Sbjct: 661  YRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYG 720

Query: 721  HYEFVVMSFGLTNAPAVFMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLE 780
            HYEFVVMSFGLTNAPAVFMDLMN+VFK+FLDSFVIVFIDDILIYSKTEAEHEEHLHQVLE
Sbjct: 721  HYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLE 780

Query: 781  TLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPST--EVRGRL- 840
            TLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW RPST  E+R  L 
Sbjct: 781  TLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLG 840

Query: 841  ------------LTYSQPVDPVDQEGNPFVWSPACERSFQELKQKLVTAPVLTVPDGSGN 900
                           + P+  + ++G PFVWSPACERSFQELKQKLVTAPVLTVPDGSGN
Sbjct: 841  LAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGN 900

Query: 901  FVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG 960
            FVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG
Sbjct: 901  FVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG 960

Query: 961  EKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHS 1020
            EKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHS
Sbjct: 961  EKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHS 1020

Query: 1021 AALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLTEKRRMV 1080
            AALITKQTPLLRDFERAEIAVSVGEVTAQLAQL+VQPTLRQKIIAAQL+DPYL EKRR+V
Sbjct: 1021 AALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLDDPYLAEKRRVV 1080

Query: 1081 ETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVY 1140
            ETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVY
Sbjct: 1081 ETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVY 1140

Query: 1141 WWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPG-------------------- 1200
            WWRGMKR+VADFVSRCLVCQQVKAPRQHPAGLLQPLSVPG                    
Sbjct: 1141 WWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRG 1200

Query: 1201 ----------LTKSAHFVPGKSTYTAN-----------------------RDARFTSKFW 1260
                      LTKSAHFVPGKSTYTA+                       RDARFTSKFW
Sbjct: 1201 YTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFW 1260

Query: 1261 KGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNN 1320
            KGLQLALGTRLDFST FHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNN
Sbjct: 1261 KGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNN 1320

Query: 1321 SYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ 1380
            SYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ
Sbjct: 1321 SYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ 1380

Query: 1381 KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLA 1399
            KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLA
Sbjct: 1381 KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLA 1440

[Close]

BLAST of IVF0011547 vs. NCBI nr
Match: KAA0025848.1 (pol protein [Cucumis melo var. makuwa] >KAA0035212.1 pol protein [Cucumis melo var. makuwa] >KAA0036593.1 pol protein [Cucumis melo var. makuwa] >KAA0036739.1 pol protein [Cucumis melo var. makuwa] >KAA0037408.1 pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2606 bits (6755), Expect = 0.0
Identity = 1352/1534 (88.14%), Postives = 1372/1534 (89.44%), Query Frame = 0


Query: 1    MPPRRGARRGGGRGGRGAGRGQPEAPPAAPAVDPNAPVTQADLAAMEQRYQDMLQAALAP 60
            MPPRRG RRGGGRGGRGAGRGQPEAPP APAVDPNAPVTQADLAAMEQRYQDMLQAALAP
Sbjct: 1    MPPRRGTRRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRYQDMLQAALAP 60

Query: 61   FLAAQQNQAAPVQA--------------QAVAPPAPEEAQPVPVQLSAEAKHLRDFRK-- 120
            FLAAQQNQAAPVQA              QAVAPPAPEEAQPVPVQLS EAKHLRDFRK  
Sbjct: 61   FLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSTEAKHLRDFRKYN 120

Query: 121  ----------------------DYFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGG 180
                                    FRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGG
Sbjct: 121  PKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGG 180

Query: 181  DVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVR 240
            DVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVR
Sbjct: 181  DVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVR 240

Query: 241  DEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADSSKAAGRGSALGQK 300
            DEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERAD+SKAAGRGSALGQK
Sbjct: 241  DEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQK 300

Query: 301  RKVETQPDVVPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCF 360
            RKVETQPDVVPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCF
Sbjct: 301  RKVETQPDVVPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCF 360

Query: 361  RCRQPGHTADVCPRKPFETTPPQPSASQQGRVYATTRQEAERAGTVVTAC---------- 420
            RCRQPGHTAD+CPRKPFETTPPQPSA+QQGRV+ATTRQEAERAGTVVT            
Sbjct: 361  RCRQPGHTADMCPRKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPILGHYAFV 420

Query: 421  -------------------GFGGRTLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDV 480
                               G     LGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDV
Sbjct: 421  LFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDV 480

Query: 481  TLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAM 540
            TLLVLDMQDFDVILGMDWLSANHANIDC+GKEVVFNPPS ASFKFRGAGMVCIPKVISAM
Sbjct: 481  TLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAM 540

Query: 541  KASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELE 600
            KASKLLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELE
Sbjct: 541  KASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELE 600

Query: 601  PGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCID 660
            PGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCID
Sbjct: 601  PGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCID 660

Query: 661  YRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYG 720
            YRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYG
Sbjct: 661  YRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYG 720

Query: 721  HYEFVVMSFGLTNAPAVFMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLE 780
            HYEFVVMSFGLTNAPAVFMDLMN+VFK+FLDSFVIVFIDDILIYSKTEAEHEEHLHQVLE
Sbjct: 721  HYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLE 780

Query: 781  TLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPST--EVRGRL- 840
            TLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW RPST  E+R  L 
Sbjct: 781  TLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLG 840

Query: 841  ------------LTYSQPVDPVDQEGNPFVWSPACERSFQELKQKLVTAPVLTVPDGSGN 900
                           + P+  + ++G PFVWSPACERSFQELKQKLVTAPVLTVPDGSGN
Sbjct: 841  LAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGN 900

Query: 901  FVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG 960
            FVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG
Sbjct: 901  FVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG 960

Query: 961  EKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHS 1020
            EKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHS
Sbjct: 961  EKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHS 1020

Query: 1021 AALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLTEKRRMV 1080
            AALITKQTPLLRDFERAEIAVSVGEVTAQLAQL+VQPTLRQKIIAAQL+DPYL EKRR+V
Sbjct: 1021 AALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLDDPYLAEKRRVV 1080

Query: 1081 ETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVY 1140
            ETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVY
Sbjct: 1081 ETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVY 1140

Query: 1141 WWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPG-------------------- 1200
            WWRGMKR+VADFVSRCLVCQQVKAPRQHPAGLLQPLSVPG                    
Sbjct: 1141 WWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRG 1200

Query: 1201 ----------LTKSAHFVPGKSTYTAN-----------------------RDARFTSKFW 1260
                      LTKSAHFVPGKSTYTA+                       RDARFTSKFW
Sbjct: 1201 YTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFW 1260

Query: 1261 KGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNN 1320
            KGLQLALGTRLDFST FHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNN
Sbjct: 1261 KGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNN 1320

Query: 1321 SYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ 1380
            SYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ
Sbjct: 1321 SYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ 1380

Query: 1381 KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLA 1399
            KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLA
Sbjct: 1381 KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLA 1440

[Close]

BLAST of IVF0011547 vs. NCBI nr
Match: TYK28422.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2606 bits (6755), Expect = 0.0
Identity = 1352/1534 (88.14%), Postives = 1372/1534 (89.44%), Query Frame = 0


Query: 1    MPPRRGARRGGGRGGRGAGRGQPEAPPAAPAVDPNAPVTQADLAAMEQRYQDMLQAALAP 60
            MPPRRG RRGGGRGGRGAGRGQPEAPP APAVDPNAPVTQADLAAMEQRYQDMLQAALAP
Sbjct: 352  MPPRRGTRRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRYQDMLQAALAP 411

Query: 61   FLAAQQNQAAPVQA--------------QAVAPPAPEEAQPVPVQLSAEAKHLRDFRK-- 120
            FLAAQQNQAAPVQA              QAVAPPAPEEAQPVPVQLS EAKHLRDFRK  
Sbjct: 412  FLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSTEAKHLRDFRKYN 471

Query: 121  ----------------------DYFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGG 180
                                    FRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGG
Sbjct: 472  PKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGG 531

Query: 181  DVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVR 240
            DVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVR
Sbjct: 532  DVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVR 591

Query: 241  DEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADSSKAAGRGSALGQK 300
            DEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERAD+SKAAGRGSALGQK
Sbjct: 592  DEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQK 651

Query: 301  RKVETQPDVVPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCF 360
            RKVETQPDVVPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCF
Sbjct: 652  RKVETQPDVVPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCF 711

Query: 361  RCRQPGHTADVCPRKPFETTPPQPSASQQGRVYATTRQEAERAGTVVTAC---------- 420
            RCRQPGHTAD+CPRKPFETTPPQPSA+QQGRV+ATTRQEAERAGTVVT            
Sbjct: 712  RCRQPGHTADMCPRKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPILGHYAFV 771

Query: 421  -------------------GFGGRTLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDV 480
                               G     LGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDV
Sbjct: 772  LFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDV 831

Query: 481  TLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAM 540
            TLLVLDMQDFDVILGMDWLSANHANIDC+GKEVVFNPPS ASFKFRGAGMVCIPKVISAM
Sbjct: 832  TLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAM 891

Query: 541  KASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELE 600
            KASKLLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELE
Sbjct: 892  KASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELE 951

Query: 601  PGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCID 660
            PGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCID
Sbjct: 952  PGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCID 1011

Query: 661  YRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYG 720
            YRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYG
Sbjct: 1012 YRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYG 1071

Query: 721  HYEFVVMSFGLTNAPAVFMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLE 780
            HYEFVVMSFGLTNAPAVFMDLMN+VFK+FLDSFVIVFIDDILIYSKTEAEHEEHLHQVLE
Sbjct: 1072 HYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLE 1131

Query: 781  TLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPST--EVRGRL- 840
            TLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW RPST  E+R  L 
Sbjct: 1132 TLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLG 1191

Query: 841  ------------LTYSQPVDPVDQEGNPFVWSPACERSFQELKQKLVTAPVLTVPDGSGN 900
                           + P+  + ++G PFVWSPACERSFQELKQKLVTAPVLTVPDGSGN
Sbjct: 1192 LAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGN 1251

Query: 901  FVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG 960
            FVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG
Sbjct: 1252 FVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG 1311

Query: 961  EKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHS 1020
            EKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHS
Sbjct: 1312 EKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHS 1371

Query: 1021 AALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLTEKRRMV 1080
            AALITKQTPLLRDFERAEIAVSVGEVTAQLAQL+VQPTLRQKIIAAQL+DPYL EKRR+V
Sbjct: 1372 AALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLDDPYLAEKRRVV 1431

Query: 1081 ETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVY 1140
            ETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVY
Sbjct: 1432 ETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVY 1491

Query: 1141 WWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPG-------------------- 1200
            WWRGMKR+VADFVSRCLVCQQVKAPRQHPAGLLQPLSVPG                    
Sbjct: 1492 WWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRG 1551

Query: 1201 ----------LTKSAHFVPGKSTYTAN-----------------------RDARFTSKFW 1260
                      LTKSAHFVPGKSTYTA+                       RDARFTSKFW
Sbjct: 1552 YTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFW 1611

Query: 1261 KGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNN 1320
            KGLQLALGTRLDFST FHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNN
Sbjct: 1612 KGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNN 1671

Query: 1321 SYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ 1380
            SYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ
Sbjct: 1672 SYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ 1731

Query: 1381 KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLA 1399
            KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLA
Sbjct: 1732 KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLA 1791

[Close]

BLAST of IVF0011547 vs. NCBI nr
Match: KAA0063098.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2606 bits (6755), Expect = 0.0
Identity = 1352/1520 (88.95%), Postives = 1366/1520 (89.87%), Query Frame = 0


Query: 1    MPPRRGARRGGGRGGRGAGRGQPEAPPAAPAVDPNAPVTQADLAAMEQRYQDMLQAALAP 60
            MPPRRGARRGGGRGGRGAGRGQPEAPP APAVDPNAPVTQADLAAMEQRYQDMLQAALAP
Sbjct: 1    MPPRRGARRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRYQDMLQAALAP 60

Query: 61   FLAAQQNQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRK---------------- 120
            FLAAQQNQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRK                
Sbjct: 61   FLAAQQNQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKA 120

Query: 121  --------DYFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENF 180
                      FRYMKCP+DQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENF
Sbjct: 121  QMWLTSIETIFRYMKCPKDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENF 180

Query: 181  YAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLR 240
            YAKFFSANVKHAKL+EFLNLEQGDMTVEQYDAEFDMLS FAPDMVRDEAARTEKFVRGLR
Sbjct: 181  YAKFFSANVKHAKLREFLNLEQGDMTVEQYDAEFDMLSCFAPDMVRDEAARTEKFVRGLR 240

Query: 241  LDLQGIVRALRPATHADALRIALDLSLPERADSSKAAGRGSALGQKRKVETQPDVVPQRT 300
            LDLQGIVRALRPATHADALRIALDLSLPERADSSKAAGRGSALGQKRKVETQPDVVPQRT
Sbjct: 241  LDLQGIVRALRPATHADALRIALDLSLPERADSSKAAGRGSALGQKRKVETQPDVVPQRT 300

Query: 301  LRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHTADVCPR 360
            LRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHTADVCPR
Sbjct: 301  LRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHTADVCPR 360

Query: 361  KPFETTPPQPSASQQGRVYATTRQEAERAGTVVTAC------------------------ 420
            KPFETTPPQPSASQQGRV+ATTRQEAERAGTVVT                          
Sbjct: 361  KPFETTPPQPSASQQGRVFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSV 420

Query: 421  -----GFGGRTLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVIL 480
                 G     LGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVIL
Sbjct: 421  FVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVIL 480

Query: 481  GMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLLSQGTWGIL 540
            GMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMK SKLLSQGTWGIL
Sbjct: 481  GMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKVSKLLSQGTWGIL 540

Query: 541  ASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMA 600
            ASVVDIREPEVSLSS+PVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMA
Sbjct: 541  ASVVDIREPEVSLSSKPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMA 600

Query: 601  PAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYP 660
             AELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT+KNRYP
Sbjct: 601  LAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTIKNRYP 660

Query: 661  LPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNA 720
            LPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNA
Sbjct: 661  LPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNA 720

Query: 721  PAVFMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKC 780
            PAVFMDLMN+VFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKC
Sbjct: 721  PAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKC 780

Query: 781  EFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPST--EVRGRL-------------LT 840
            EFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPST  E+R  L               
Sbjct: 781  EFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR 840

Query: 841  YSQPVDPVDQEGNPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGC 900
             + P+  + ++G PFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKK LGC
Sbjct: 841  IASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKELGC 900

Query: 901  VLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKY 960
            VLMQQGKVVAYASRQLK HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKY
Sbjct: 901  VLMQQGKVVAYASRQLKTHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKY 960

Query: 961  FFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDF 1020
            FFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDF
Sbjct: 961  FFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDF 1020

Query: 1021 ERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLTEKRRMVETEQGEDFSISSDD 1080
            ERAEI VSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYL EKRRMVET QGEDFSISSDD
Sbjct: 1021 ERAEITVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISSDD 1080

Query: 1081 GLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVS 1140
            GLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVS
Sbjct: 1081 GLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVS 1140

Query: 1141 RCLVCQQVKAPRQHPAGLLQPLSVPG------------------------------LTKS 1200
            RCLVCQQVKAPRQHPAGLLQPLSVPG                              LTKS
Sbjct: 1141 RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTQKGYTVIWVVVDRLTKS 1200

Query: 1201 AHFVPGKSTYTAN-----------------------RDARFTSKFWKGLQLALGTRLDFS 1260
            AHFVPGKSTYTA+                       RDARFTSKFWKGLQLALGTRLDFS
Sbjct: 1201 AHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFS 1260

Query: 1261 TTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEAL 1320
            T FHPQTDGQTERLNQILEDMLRACVLEFS SWDSHLHLMEFAYNNSYQATI MAPFEAL
Sbjct: 1261 TAFHPQTDGQTERLNQILEDMLRACVLEFSRSWDSHLHLMEFAYNNSYQATISMAPFEAL 1320

Query: 1321 YGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFE 1380
            YGKCCRSPVCWGEVGEQRMLGPELVQTTN AIQKIRARMLTAQSRQKSYADVRRKDLEFE
Sbjct: 1321 YGKCCRSPVCWGEVGEQRMLGPELVQTTNTAIQKIRARMLTAQSRQKSYADVRRKDLEFE 1380

Query: 1381 VGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHI 1399
            VGDMVFLKVAPMKGVLRFAKK KLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHI
Sbjct: 1381 VGDMVFLKVAPMKGVLRFAKKRKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHI 1440

[Close]

BLAST of IVF0011547 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 79.0 bits (193), Expect = 3.5e-14
Identity = 45/124 (36.29%), Postives = 66/124 (53.23%), Query Frame = 0


Query: 707 HLHQVLETLRANKLYAKFSKCEFWLRKVTFLG--HVVSSEGVSVDPAKIEAVTNWPRP-- 766
           HL  VL+    ++ YA   KC F   ++ +LG  H++S EGVS DPAK+EA+  WP P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 767 STEVRGRL----------LTYSQPVDPVDQ--EGNPFVWSPACERSFQELKQKLVTAPVL 815
           +TE+RG L            Y + V P+ +  + N   W+     +F+ LK  + T PVL
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNSLKWTEMAALAFKALKGAVTTLPVL 122

The following BLAST results are available for this feature:

BLAST of IVF0011547 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CT41	1.2e-109	29.75	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.2e-109	29.75	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	1.2e-109	29.75	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	1.2e-109	29.75	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT37	1.2e-109	29.75	Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of IVF0011547 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SIJ5	0.0e+00	88.88	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34...	[more]
A0A5D3CQB5	0.0e+00	88.20	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5A7TEQ2	0.0e+00	88.14	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold19...	[more]
A0A5A7TSL0	0.0e+00	88.14	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19...	[more]
A0A5D3DY07	0.0e+00	88.14	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold62...	[more]

BLAST of IVF0011547 vs. NCBI nr


Match Name	Identity	Description
KAA0025998.1	88.88	pol protein [Cucumis melo var. makuwa]	[more]
TYJ95850.1	88.20	pol protein [Cucumis melo var. makuwa] >TYJ99649.1 pol protein [Cucumis melo var...	[more]
KAA0025848.1	88.14	pol protein [Cucumis melo var. makuwa] >KAA0035212.1 pol protein [Cucumis melo v...	[more]
TYK28422.1	88.14	pol protein [Cucumis melo var. makuwa]	[more]
KAA0063098.1	88.95	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of IVF0011547 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	3.5e-14	36.29	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 320..336 e-value: 0.0096 score: 23.6
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 321..336 score: 9.092303
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 581..740 e-value: 1.6E-27 score: 96.5
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 562..741 score: 10.474539
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 1094..1243 e-value: 2.4E-24 score: 87.7
None	No IPR available	GENE3D	1.10.340.70		coord: 990..1081 e-value: 1.3E-17 score: 65.8
None	No IPR available	GENE3D	3.10.20.370		coord: 814..884 e-value: 1.4E-7 score: 33.3
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 527..666 e-value: 2.8E-94 score: 316.3
None	No IPR available	PFAM	PF08284	RVP_2	coord: 377..450 e-value: 9.3E-19 score: 67.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 250..283
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 301..763 coord: 786..939
None	No IPR available	PANTHER	PTHR24559:SF383	DNA/RNA POLYMERASES SUPERFAMILY PROTEIN	coord: 79..219
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 79..219
None	No IPR available	PANTHER	PTHR24559:SF383	DNA/RNA POLYMERASES SUPERFAMILY PROTEIN	coord: 301..763 coord: 786..939
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 820..935 e-value: 2.88781E-58 score: 194.248
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 368..432 e-value: 3.02051E-9 score: 53.4944
None	No IPR available	CDD	cd01647	RT_LTR	coord: 565..741 e-value: 1.09704E-95 score: 302.977
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 606..741 e-value: 2.8E-94 score: 316.3
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 367..456 e-value: 5.5E-11 score: 44.3
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 817..913 e-value: 2.0E-33 score: 114.8
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 120..216 e-value: 2.7E-16 score: 59.6
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 1026..1082 e-value: 1.2E-16 score: 60.5
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 1111..1203 score: 10.590693
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 1111..1200
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 505..919

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0011547.2	IVF0011547.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008194	UDP-glycosyltransferase activity
molecular_function	GO:0008270	zinc ion binding