IVF0011471 (gene) Melon (IVF77) v1

Overview


Name	IVF0011471
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	integrator complex subunit 3 homolog
Location	chr02: 6448309 .. 6449100 (-)
RNA-Seq Expression	IVF0011471
Synteny	IVF0011471

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGAAAACCCCCAAGAAACAGTTCTCTCTTTTTCTGGAACAGACAAGGAGGAGATTGCTAAGTTGGTAACAAATGCCTTTTCTGCTTATAGATGTTTCCTTGCTTATTCAAAAGATATTTTGCACAAAGATGCTGATGTATCTTTAACCAAGGTCTTCTATCGTGATTTGATGTCCTGTGTGGAATGGAATGCAAGGAGAGTGAAATTCTTATTCCATTGCATTTTTGATCTTCTCTCAGATTTATGCATATGCAAGGAAGAGATTGTTAAATTACTTGTTACCCTGTTGGATGACACTGATCTTGTTAATATGCAGTTCGAGATTATTGCAAAGAAATTTTCTGTGTTTGGTAAGGACATTAAATCTATTTTTCTTTTAGTTAAGAACTCTCTGAATTGGGGTTGTCTCGAACAACGTAAACTCTGGGGCTTGATAAGGTCCGAGCTTATAGTTTCACAGGTTCGGGTCGAGAACATAGTTTCTAAACTTTTTTGCTTGGGAGTATTAGATGCAAGCAAGCATGCCATTGCCATTGAAGGTCTTCTAAACTTGTGCTGTTATAATGCACCATCGCCTGAGTTTGTTGAGGCAATCATGTTGTTACCCAATGATGCATTTGATGGCTTCTCAGCCGCAGTTTTGGCTTCCTGGGCTGTATCGAACGAGTCGATGCTATTTCATAGCCTGGTTGATTTTGCAGGGAAACTTGGGAAGATGAATGAAAGTGAGGTTGTGGTAAATCATTCTGCAGTTTTATGGTTGGTAAATCATTTTAGACGAATCTGA

mRNA sequence

ATGGGAGAAAACCCCCAAGAAACAGTTCTCTCTTTTTCTGGAACAGACAAGGAGGAGATTGCTAAGTTGGTAACAAATGCCTTTTCTGCTTATAGATGTTTCCTTGCTTATTCAAAAGATATTTTGCACAAAGATGCTGATGTATCTTTAACCAAGGTCTTCTATCGTGATTTGATGTCCTGTGTGGAATGGAATGCAAGGAGAGTGAAATTCTTATTCCATTGCATTTTTGATCTTCTCTCAGATTTATGCATATGCAAGGAAGAGATTGTTAAATTACTTGTTACCCTGTTGGATGACACTGATCTTGTTAATATGCAGTTCGAGATTATTGCAAAGAAATTTTCTGTGTTTGGTAAGGACATTAAATCTATTTTTCTTTTAGTTAAGAACTCTCTGAATTGGGGTTGTCTCGAACAACGTAAACTCTGGGGCTTGATAAGGTCCGAGCTTATAGTTTCACAGGTTCGGGTCGAGAACATAGTTTCTAAACTTTTTTGCTTGGGAGTATTAGATGCAAGCAAGCATGCCATTGCCATTGAAGGTCTTCTAAACTTGTGCTGTTATAATGCACCATCGCCTGAGTTTGTTGAGGCAATCATGTTGTTACCCAATGATGCATTTGATGGCTTCTCAGCCGCAGTTTTGGCTTCCTGGGCTGTATCGAACGAGTCGATGCTATTTCATAGCCTGGTTGATTTTGCAGGGAAACTTGGGAAGATGAATGAAAGTGAGGTTGTGGTAAATCATTCTGCAGTTTTATGGTTGGTAAATCATTTTAGACGAATCTGA

Coding sequence (CDS)

ATGGGAGAAAACCCCCAAGAAACAGTTCTCTCTTTTTCTGGAACAGACAAGGAGGAGATTGCTAAGTTGGTAACAAATGCCTTTTCTGCTTATAGATGTTTCCTTGCTTATTCAAAAGATATTTTGCACAAAGATGCTGATGTATCTTTAACCAAGGTCTTCTATCGTGATTTGATGTCCTGTGTGGAATGGAATGCAAGGAGAGTGAAATTCTTATTCCATTGCATTTTTGATCTTCTCTCAGATTTATGCATATGCAAGGAAGAGATTGTTAAATTACTTGTTACCCTGTTGGATGACACTGATCTTGTTAATATGCAGTTCGAGATTATTGCAAAGAAATTTTCTGTGTTTGGTAAGGACATTAAATCTATTTTTCTTTTAGTTAAGAACTCTCTGAATTGGGGTTGTCTCGAACAACGTAAACTCTGGGGCTTGATAAGGTCCGAGCTTATAGTTTCACAGGTTCGGGTCGAGAACATAGTTTCTAAACTTTTTTGCTTGGGAGTATTAGATGCAAGCAAGCATGCCATTGCCATTGAAGGTCTTCTAAACTTGTGCTGTTATAATGCACCATCGCCTGAGTTTGTTGAGGCAATCATGTTGTTACCCAATGATGCATTTGATGGCTTCTCAGCCGCAGTTTTGGCTTCCTGGGCTGTATCGAACGAGTCGATGCTATTTCATAGCCTGGTTGATTTTGCAGGGAAACTTGGGAAGATGAATGAAAGTGAGGTTGTGGTAAATCATTCTGCAGTTTTATGGTTGGTAAATCATTTTAGACGAATCTGA

Protein sequence

MGENPQETVLSFSGTDKEEIAKLVTNAFSAYRCFLAYSKDILHKDADVSLTKVFYRDLMSCVEWNARRVKFLFHCIFDLLSDLCICKEEIVKLLVTLLDDTDLVNMQFEIIAKKFSVFGKDIKSIFLLVKNSLNWGCLEQRKLWGLIRSELIVSQVRVENIVSKLFCLGVLDASKHAIAIEGLLNLCCYNAPSPEFVEAIMLLPNDAFDGFSAAVLASWAVSNESMLFHSLVDFAGKLGKMNESEVVVNHSAVLWLVNHFRRI

Homology

[Close]

BLAST of IVF0011471 vs. ExPASy TrEMBL
Match: A0A1S4DYU4 (integrator complex subunit 3 homolog OS=Cucumis melo OX=3656 GN=LOC103491988 PE=3 SV=1)

HSP 1 Score: 523.9 bits (1348), Expect = 4.0e-145
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 1   MGENPQETVLSFSGTDKEEIAKLVTNAFSAYRCFLAYSKDILHKDADVSLTKVFYRDLMS 60
           MGENPQETVLSFSGTDKEEIAKLVTNAFSAYRCFLAYSKDILHKDADVSLTKVFYRDLMS
Sbjct: 704 MGENPQETVLSFSGTDKEEIAKLVTNAFSAYRCFLAYSKDILHKDADVSLTKVFYRDLMS 763

Query: 61  CVEWNARRVKFLFHCIFDLLSDLCICKEEIVKLLVTLLDDTDLVNMQFEIIAKKFSVFGK 120
           CVEWNARRVKFLFHCIFDLLSDLCICKEEIVKLLVTLLDDTDLVNMQFEIIAKKFSVFGK
Sbjct: 764 CVEWNARRVKFLFHCIFDLLSDLCICKEEIVKLLVTLLDDTDLVNMQFEIIAKKFSVFGK 823

Query: 121 DIKSIFLLVKNSLNWGCLEQRKLWGLIRSELIVSQVRVENIVSKLFCLGVLDASKHAIAI 180
           DIKSIFLLVKNSLNWGCLEQRKLWGLIRSELIVSQVRVENIVSKLFCLGVLDASKHAIAI
Sbjct: 824 DIKSIFLLVKNSLNWGCLEQRKLWGLIRSELIVSQVRVENIVSKLFCLGVLDASKHAIAI 883

Query: 181 EGLLNLCCYNAPSPEFVEAIMLLPNDAFDGFSAAVLASWAVSNESMLFHSLVDFAGKLGK 240
           EGLLNLCCYNAPSPEFVEAIMLLPNDAFDGFSAAVLASWAVSNESMLFHSLVDFAGKLGK
Sbjct: 884 EGLLNLCCYNAPSPEFVEAIMLLPNDAFDGFSAAVLASWAVSNESMLFHSLVDFAGKLGK 943

Query: 241 MNESEVVVNHSAVLWLVNHFRRI 264
           MNESEVVVNHSAVLWLVNHFRRI
Sbjct: 944 MNESEVVVNHSAVLWLVNHFRRI 966

[Close]

BLAST of IVF0011471 vs. ExPASy TrEMBL
Match: A0A5D3DW40 (Integrator complex subunit 3-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold225G00540 PE=3 SV=1)

HSP 1 Score: 493.0 bits (1268), Expect = 7.5e-136
Identity = 249/259 (96.14%), Postives = 252/259 (97.30%), Query Frame = 0


Query: 1   MGENPQETVLSFSGTDKEEIAKLVTNAFSAYRCFLAYSKDILHKDADVSLTKVFYRDLMS 60
           MGENPQETVLSFSGTDKEEIAKLVTNAFSAYRCFLAYSKDILHKDADVSLTKVFYRDLMS
Sbjct: 704 MGENPQETVLSFSGTDKEEIAKLVTNAFSAYRCFLAYSKDILHKDADVSLTKVFYRDLMS 763

Query: 61  CVEWNARRVKFLFHCIFDLLSDLCICKEEIVKLLVTLLDDTDLVNMQFEIIAKKFSVFGK 120
           CVEWNARRVKFLFHCIFDLLSDLCICKEEIVKLLVTLLDDTDLVNMQFEIIAKKFSVFGK
Sbjct: 764 CVEWNARRVKFLFHCIFDLLSDLCICKEEIVKLLVTLLDDTDLVNMQFEIIAKKFSVFGK 823

Query: 121 DIKSIFLLVKNSLNWGCLEQRKLWGLIRSELIVSQVRVENIVSKLFCLGVLDASKHAIAI 180
           DIKSIFLLVKNSLNWGCLEQRKLWGLIRSELIVSQVRVENIVSKLFCLGVLDASKHAIAI
Sbjct: 824 DIKSIFLLVKNSLNWGCLEQRKLWGLIRSELIVSQVRVENIVSKLFCLGVLDASKHAIAI 883

Query: 181 EGLLNLCCYNAPSPEFVEAIMLLPNDAFDGFSAAVLASWAVSNESMLFHSLVDFAGKLGK 240
           EGLLNLCCYNAPSPEFVEAIMLLPNDAFDGFSAAVLASWAVSNESMLFHSLVDFAGKLGK
Sbjct: 884 EGLLNLCCYNAPSPEFVEAIMLLPNDAFDGFSAAVLASWAVSNESMLFHSLVDFAGKLGK 943

Query: 241 MNESEVVVNHSAVLWLVNH 260
           MNESEVV  +  +  + NH
Sbjct: 944 MNESEVVKKNYEIRSMGNH 962

[Close]

BLAST of IVF0011471 vs. ExPASy TrEMBL
Match: A0A5A7UN45 (Integrator complex subunit 3-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G001810 PE=3 SV=1)

HSP 1 Score: 490.7 bits (1262), Expect = 3.7e-135
Identity = 248/259 (95.75%), Postives = 251/259 (96.91%), Query Frame = 0


Query: 1   MGENPQETVLSFSGTDKEEIAKLVTNAFSAYRCFLAYSKDILHKDADVSLTKVFYRDLMS 60
           MGENPQETVLSFSGTDKEEIAKLVTNAFSAYRCFLAYSKDILHKDADVSLTKVFYRDLMS
Sbjct: 704 MGENPQETVLSFSGTDKEEIAKLVTNAFSAYRCFLAYSKDILHKDADVSLTKVFYRDLMS 763

Query: 61  CVEWNARRVKFLFHCIFDLLSDLCICKEEIVKLLVTLLDDTDLVNMQFEIIAKKFSVFGK 120
           CVEWNARRVKFLFHCIFDLLSDLCICKEEIVKLLVTLLDDTDLVNMQFEI AKKFSVFGK
Sbjct: 764 CVEWNARRVKFLFHCIFDLLSDLCICKEEIVKLLVTLLDDTDLVNMQFEISAKKFSVFGK 823

Query: 121 DIKSIFLLVKNSLNWGCLEQRKLWGLIRSELIVSQVRVENIVSKLFCLGVLDASKHAIAI 180
           DIKSIFLLVKNSLNWGCLEQRKLWGLIRSELIVSQVRVENIVSKLFCLGVLDASKHAIAI
Sbjct: 824 DIKSIFLLVKNSLNWGCLEQRKLWGLIRSELIVSQVRVENIVSKLFCLGVLDASKHAIAI 883

Query: 181 EGLLNLCCYNAPSPEFVEAIMLLPNDAFDGFSAAVLASWAVSNESMLFHSLVDFAGKLGK 240
           EGLLNLCCYNAPSPEFVEAIMLLPNDAFDGFSAAVLASWAVSNESMLFHSLVDFAGKLGK
Sbjct: 884 EGLLNLCCYNAPSPEFVEAIMLLPNDAFDGFSAAVLASWAVSNESMLFHSLVDFAGKLGK 943

Query: 241 MNESEVVVNHSAVLWLVNH 260
           MNESEVV  +  +  + NH
Sbjct: 944 MNESEVVKKNYEIRSMGNH 962

[Close]

BLAST of IVF0011471 vs. ExPASy TrEMBL
Match: A0A0A0LXR4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G627430 PE=3 SV=1)

HSP 1 Score: 464.5 bits (1194), Expect = 2.9e-127
Identity = 233/248 (93.95%), Postives = 241/248 (97.18%), Query Frame = 0


Query: 1   MGENPQETVLSFSGTDKEEIAKLVTNAFSAYRCFLAYSKDILHKDADVSLTKVFYRDLMS 60
           MGE PQETVLSFSG +KEEIAKLVTNAFSAYRCFLAY KDILHKDADVSLTKVFYRDLMS
Sbjct: 704 MGEYPQETVLSFSGINKEEIAKLVTNAFSAYRCFLAYLKDILHKDADVSLTKVFYRDLMS 763

Query: 61  CVEWNARRVKFLFHCIFDLLSDLCICKEEIVKLLVTLLDDTDLVNMQFEIIAKKFSVFGK 120
           CVEWNARRVKFLFHCIFDLLSDLC+CKEEIVKLLVTLLDDTDLVNMQFEIIAKKF VFGK
Sbjct: 764 CVEWNARRVKFLFHCIFDLLSDLCLCKEEIVKLLVTLLDDTDLVNMQFEIIAKKFCVFGK 823

Query: 121 DIKSIFLLVKNSLNWGCLEQRKLWGLIRSELIVSQVRVENIVSKLFCLGVLDASKHAIAI 180
           DIKSIFLLVK+SLNWGCLEQRKLWGLIRSEL+VSQVRVENIVSKLFCLGVLDASKHAIAI
Sbjct: 824 DIKSIFLLVKSSLNWGCLEQRKLWGLIRSELVVSQVRVENIVSKLFCLGVLDASKHAIAI 883

Query: 181 EGLLNLCCYNAPSPEFVEAIMLLPNDAFDGFSAAVLASWAVSNESMLFHSLVDFAGKLGK 240
           EGLLNLCCY+APSPEFVEAIML+PNDAF GFSAAVLASW VSNESMLF SLVDF+GKLGK
Sbjct: 884 EGLLNLCCYSAPSPEFVEAIMLIPNDAFHGFSAAVLASWVVSNESMLFQSLVDFSGKLGK 943

Query: 241 MNESEVVV 249
           MNESEVV+
Sbjct: 944 MNESEVVM 951

[Close]

BLAST of IVF0011471 vs. ExPASy TrEMBL
Match: A0A6J1ERY7 (integrator complex subunit 3 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435309 PE=3 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 7.3e-115
Identity = 213/260 (81.92%), Postives = 233/260 (89.62%), Query Frame = 0


Query: 1   MGENPQETVLSFSGTDKEEIAKLVTNAFSAYRCFLAYSKDILHKDADVSLTKVFYRDLMS 60
           M ENPQE V+SFS  DKE IA+LVTNAFSAYR FLA SKDIL+KDADVSLTKVFY DL+S
Sbjct: 719 MKENPQEAVVSFSKIDKEVIAELVTNAFSAYRSFLANSKDILYKDADVSLTKVFYLDLVS 778

Query: 61  CVEWNARRVKFLFHCIFDLLSDLCICKEEIVKLLVTLLDDTDLVNMQFEIIAKKFSVFGK 120
           CVE NARR K LF+C+FDLLSD+CICKEEIVKLLVT LDDTDLVNMQFEII KKF VFGK
Sbjct: 779 CVERNARRAKHLFYCVFDLLSDICICKEEIVKLLVTQLDDTDLVNMQFEIIKKKFCVFGK 838

Query: 121 DIKSIFLLVKNSLNWGCLEQRKLWGLIRSELIVSQVRVENIVSKLFCLGVLDASKHAIAI 180
           D +SIFLLVK+SLNWGC EQ KLWGLIRSELIVS+V+V++IV KLFC GV+D S HAIA+
Sbjct: 839 DAESIFLLVKSSLNWGCFEQHKLWGLIRSELIVSKVQVQSIVLKLFCSGVIDGSMHAIAV 898

Query: 181 EGLLNLCCYNAPSPEFVEAIMLLPNDAFDGFSAAVLASWAVSNESMLFHSLVDFAGKLGK 240
           EGLLNLCCYNAPSP+ VEAIMLLPNDAF GFSAAVLA+W VSNESMLFHSLVDFA KL K
Sbjct: 899 EGLLNLCCYNAPSPQLVEAIMLLPNDAFQGFSAAVLAAWVVSNESMLFHSLVDFAEKLSK 958

Query: 241 MNESEVVVNHSAVLWLVNHF 261
           M+ESE+VVN SAVLWLVN+F
Sbjct: 959 MSESEIVVNQSAVLWLVNYF 978

[Close]

BLAST of IVF0011471 vs. NCBI nr
Match: XP_016900895.1 (PREDICTED: integrator complex subunit 3 homolog [Cucumis melo])

HSP 1 Score: 518 bits (1334), Expect = 3.12e-175
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 1   MGENPQETVLSFSGTDKEEIAKLVTNAFSAYRCFLAYSKDILHKDADVSLTKVFYRDLMS 60
           MGENPQETVLSFSGTDKEEIAKLVTNAFSAYRCFLAYSKDILHKDADVSLTKVFYRDLMS
Sbjct: 704 MGENPQETVLSFSGTDKEEIAKLVTNAFSAYRCFLAYSKDILHKDADVSLTKVFYRDLMS 763

Query: 61  CVEWNARRVKFLFHCIFDLLSDLCICKEEIVKLLVTLLDDTDLVNMQFEIIAKKFSVFGK 120
           CVEWNARRVKFLFHCIFDLLSDLCICKEEIVKLLVTLLDDTDLVNMQFEIIAKKFSVFGK
Sbjct: 764 CVEWNARRVKFLFHCIFDLLSDLCICKEEIVKLLVTLLDDTDLVNMQFEIIAKKFSVFGK 823

Query: 121 DIKSIFLLVKNSLNWGCLEQRKLWGLIRSELIVSQVRVENIVSKLFCLGVLDASKHAIAI 180
           DIKSIFLLVKNSLNWGCLEQRKLWGLIRSELIVSQVRVENIVSKLFCLGVLDASKHAIAI
Sbjct: 824 DIKSIFLLVKNSLNWGCLEQRKLWGLIRSELIVSQVRVENIVSKLFCLGVLDASKHAIAI 883

Query: 181 EGLLNLCCYNAPSPEFVEAIMLLPNDAFDGFSAAVLASWAVSNESMLFHSLVDFAGKLGK 240
           EGLLNLCCYNAPSPEFVEAIMLLPNDAFDGFSAAVLASWAVSNESMLFHSLVDFAGKLGK
Sbjct: 884 EGLLNLCCYNAPSPEFVEAIMLLPNDAFDGFSAAVLASWAVSNESMLFHSLVDFAGKLGK 943

Query: 241 MNESEVVVNHSAVLWLVNHFRRI 263
           MNESEVVVNHSAVLWLVNHFRRI
Sbjct: 944 MNESEVVVNHSAVLWLVNHFRRI 966

[Close]

BLAST of IVF0011471 vs. NCBI nr
Match: XP_011660159.1 (uncharacterized protein LOC101216642 [Cucumis sativus] >XP_011660160.1 uncharacterized protein LOC101216642 [Cucumis sativus])

HSP 1 Score: 489 bits (1258), Expect = 7.38e-164
Identity = 246/261 (94.25%), Postives = 254/261 (97.32%), Query Frame = 0


Query: 1   MGENPQETVLSFSGTDKEEIAKLVTNAFSAYRCFLAYSKDILHKDADVSLTKVFYRDLMS 60
           MGE PQETVLSFSG +KEEIAKLVTNAFSAYRCFLAY KDILHKDADVSLTKVFYRDLMS
Sbjct: 704 MGEYPQETVLSFSGINKEEIAKLVTNAFSAYRCFLAYLKDILHKDADVSLTKVFYRDLMS 763

Query: 61  CVEWNARRVKFLFHCIFDLLSDLCICKEEIVKLLVTLLDDTDLVNMQFEIIAKKFSVFGK 120
           CVEWNARRVKFLFHCIFDLLSDLC+CKEEIVKLLVTLLDDTDLVNMQFEIIAKKF VFGK
Sbjct: 764 CVEWNARRVKFLFHCIFDLLSDLCLCKEEIVKLLVTLLDDTDLVNMQFEIIAKKFCVFGK 823

Query: 121 DIKSIFLLVKNSLNWGCLEQRKLWGLIRSELIVSQVRVENIVSKLFCLGVLDASKHAIAI 180
           DIKSIFLLVK+SLNWGCLEQRKLWGLIRSEL+VSQVRVENIVSKLFCLGVLDASKHAIAI
Sbjct: 824 DIKSIFLLVKSSLNWGCLEQRKLWGLIRSELVVSQVRVENIVSKLFCLGVLDASKHAIAI 883

Query: 181 EGLLNLCCYNAPSPEFVEAIMLLPNDAFDGFSAAVLASWAVSNESMLFHSLVDFAGKLGK 240
           EGLLNLCCY+APSPEFVEAIML+PNDAF GFSAAVLASW VSNESMLF SLVDF+GKLGK
Sbjct: 884 EGLLNLCCYSAPSPEFVEAIMLIPNDAFHGFSAAVLASWVVSNESMLFQSLVDFSGKLGK 943

Query: 241 MNESEVVVNHSAVLWLVNHFR 261
           MNESEVVVNHSA+LWLVNHFR
Sbjct: 944 MNESEVVVNHSAILWLVNHFR 964

[Close]

BLAST of IVF0011471 vs. NCBI nr
Match: TYK27714.1 (integrator complex subunit 3-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 488 bits (1255), Expect = 2.63e-163
Identity = 249/259 (96.14%), Postives = 252/259 (97.30%), Query Frame = 0


Query: 1   MGENPQETVLSFSGTDKEEIAKLVTNAFSAYRCFLAYSKDILHKDADVSLTKVFYRDLMS 60
           MGENPQETVLSFSGTDKEEIAKLVTNAFSAYRCFLAYSKDILHKDADVSLTKVFYRDLMS
Sbjct: 704 MGENPQETVLSFSGTDKEEIAKLVTNAFSAYRCFLAYSKDILHKDADVSLTKVFYRDLMS 763

Query: 61  CVEWNARRVKFLFHCIFDLLSDLCICKEEIVKLLVTLLDDTDLVNMQFEIIAKKFSVFGK 120
           CVEWNARRVKFLFHCIFDLLSDLCICKEEIVKLLVTLLDDTDLVNMQFEIIAKKFSVFGK
Sbjct: 764 CVEWNARRVKFLFHCIFDLLSDLCICKEEIVKLLVTLLDDTDLVNMQFEIIAKKFSVFGK 823

Query: 121 DIKSIFLLVKNSLNWGCLEQRKLWGLIRSELIVSQVRVENIVSKLFCLGVLDASKHAIAI 180
           DIKSIFLLVKNSLNWGCLEQRKLWGLIRSELIVSQVRVENIVSKLFCLGVLDASKHAIAI
Sbjct: 824 DIKSIFLLVKNSLNWGCLEQRKLWGLIRSELIVSQVRVENIVSKLFCLGVLDASKHAIAI 883

Query: 181 EGLLNLCCYNAPSPEFVEAIMLLPNDAFDGFSAAVLASWAVSNESMLFHSLVDFAGKLGK 240
           EGLLNLCCYNAPSPEFVEAIMLLPNDAFDGFSAAVLASWAVSNESMLFHSLVDFAGKLGK
Sbjct: 884 EGLLNLCCYNAPSPEFVEAIMLLPNDAFDGFSAAVLASWAVSNESMLFHSLVDFAGKLGK 943

Query: 241 MNESEVVVNHSAVLWLVNH 259
           MNESEVV  +  +  + NH
Sbjct: 944 MNESEVVKKNYEIRSMGNH 962

[Close]

BLAST of IVF0011471 vs. NCBI nr
Match: KAA0056027.1 (integrator complex subunit 3-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 485 bits (1249), Expect = 2.08e-162
Identity = 248/259 (95.75%), Postives = 251/259 (96.91%), Query Frame = 0


Query: 1   MGENPQETVLSFSGTDKEEIAKLVTNAFSAYRCFLAYSKDILHKDADVSLTKVFYRDLMS 60
           MGENPQETVLSFSGTDKEEIAKLVTNAFSAYRCFLAYSKDILHKDADVSLTKVFYRDLMS
Sbjct: 704 MGENPQETVLSFSGTDKEEIAKLVTNAFSAYRCFLAYSKDILHKDADVSLTKVFYRDLMS 763

Query: 61  CVEWNARRVKFLFHCIFDLLSDLCICKEEIVKLLVTLLDDTDLVNMQFEIIAKKFSVFGK 120
           CVEWNARRVKFLFHCIFDLLSDLCICKEEIVKLLVTLLDDTDLVNMQFEI AKKFSVFGK
Sbjct: 764 CVEWNARRVKFLFHCIFDLLSDLCICKEEIVKLLVTLLDDTDLVNMQFEISAKKFSVFGK 823

Query: 121 DIKSIFLLVKNSLNWGCLEQRKLWGLIRSELIVSQVRVENIVSKLFCLGVLDASKHAIAI 180
           DIKSIFLLVKNSLNWGCLEQRKLWGLIRSELIVSQVRVENIVSKLFCLGVLDASKHAIAI
Sbjct: 824 DIKSIFLLVKNSLNWGCLEQRKLWGLIRSELIVSQVRVENIVSKLFCLGVLDASKHAIAI 883

Query: 181 EGLLNLCCYNAPSPEFVEAIMLLPNDAFDGFSAAVLASWAVSNESMLFHSLVDFAGKLGK 240
           EGLLNLCCYNAPSPEFVEAIMLLPNDAFDGFSAAVLASWAVSNESMLFHSLVDFAGKLGK
Sbjct: 884 EGLLNLCCYNAPSPEFVEAIMLLPNDAFDGFSAAVLASWAVSNESMLFHSLVDFAGKLGK 943

Query: 241 MNESEVVVNHSAVLWLVNH 259
           MNESEVV  +  +  + NH
Sbjct: 944 MNESEVVKKNYEIRSMGNH 962

[Close]

BLAST of IVF0011471 vs. NCBI nr
Match: KGN66841.2 (hypothetical protein Csa_007655 [Cucumis sativus])

HSP 1 Score: 476 bits (1225), Expect = 2.25e-155
Identity = 240/255 (94.12%), Postives = 248/255 (97.25%), Query Frame = 0


Query: 1   MGENPQETVLSFSGTDKEEIAKLVTNAFSAYRCFLAYSKDILHKDADVSLTKVFYRDLMS 60
           MGE PQETVLSFSG +KEEIAKLVTNAFSAYRCFLAY KDILHKDADVSLTKVFYRDLMS
Sbjct: 704 MGEYPQETVLSFSGINKEEIAKLVTNAFSAYRCFLAYLKDILHKDADVSLTKVFYRDLMS 763

Query: 61  CVEWNARRVKFLFHCIFDLLSDLCICKEEIVKLLVTLLDDTDLVNMQFEIIAKKFSVFGK 120
           CVEWNARRVKFLFHCIFDLLSDLC+CKEEIVKLLVTLLDDTDLVNMQFEIIAKKF VFGK
Sbjct: 764 CVEWNARRVKFLFHCIFDLLSDLCLCKEEIVKLLVTLLDDTDLVNMQFEIIAKKFCVFGK 823

Query: 121 DIKSIFLLVKNSLNWGCLEQRKLWGLIRSELIVSQVRVENIVSKLFCLGVLDASKHAIAI 180
           DIKSIFLLVK+SLNWGCLEQRKLWGLIRSEL+VSQVRVENIVSKLFCLGVLDASKHAIAI
Sbjct: 824 DIKSIFLLVKSSLNWGCLEQRKLWGLIRSELVVSQVRVENIVSKLFCLGVLDASKHAIAI 883

Query: 181 EGLLNLCCYNAPSPEFVEAIMLLPNDAFDGFSAAVLASWAVSNESMLFHSLVDFAGKLGK 240
           EGLLNLCCY+APSPEFVEAIML+PNDAF GFSAAVLASW VSNESMLF SLVDF+GKLGK
Sbjct: 884 EGLLNLCCYSAPSPEFVEAIMLIPNDAFHGFSAAVLASWVVSNESMLFQSLVDFSGKLGK 943

Query: 241 MNESEVVVNHSAVLW 255
           MNESEVVVNHSA+LW
Sbjct: 944 MNESEVVVNHSAILW 958

The following BLAST results are available for this feature:

BLAST of IVF0011471 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0011471 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DYU4	4.0e-145	100.00	integrator complex subunit 3 homolog OS=Cucumis melo OX=3656 GN=LOC103491988 PE=...	[more]
A0A5D3DW40	7.5e-136	96.14	Integrator complex subunit 3-like protein OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A5A7UN45	3.7e-135	95.75	Integrator complex subunit 3-like protein OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A0A0LXR4	2.9e-127	93.95	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G627430 PE=3 SV=1	[more]
A0A6J1ERY7	7.3e-115	81.92	integrator complex subunit 3 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of IVF0011471 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016900895.1	3.12e-175	100.00	PREDICTED: integrator complex subunit 3 homolog [Cucumis melo]	[more]
XP_011660159.1	7.38e-164	94.25	uncharacterized protein LOC101216642 [Cucumis sativus] >XP_011660160.1 uncharact...	[more]
TYK27714.1	2.63e-163	96.14	integrator complex subunit 3-like protein [Cucumis melo var. makuwa]	[more]
KAA0056027.1	2.08e-162	95.75	integrator complex subunit 3-like protein [Cucumis melo var. makuwa]	[more]
KGN66841.2	2.25e-155	94.12	hypothetical protein Csa_007655 [Cucumis sativus]	[more]

BLAST of IVF0011471 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019333	Integrator complex subunit 3	PANTHER	PTHR13587	INTEGRATOR COMPLEX SUBUNIT 3	coord: 3..251

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0011471.1	IVF0011471.1	mRNA