IVF0011428 (gene) Melon (IVF77) v1

Overview


Name	IVF0011428
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	glucose-induced degradation protein 8 homolog
Location	chr04: 4110746 .. 4114486 (-)
RNA-Seq Expression	IVF0011428
Synteny	IVF0011428

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAGTTTTCGCCGGAGCGCGTTAACAAAACTTGCGGTAAAAAAAAGGAAAAGGAAAACTGAGCATCGGGCTGCAAAACCAAAAATTCCGATACCGAGTCGGATCATTTTCATTTTCGTACCGCGCAAGTCCAAGACGAAGAGGGCCGATTTGAGAGATCGAACTCCATGAAACTTCTTCCTCCTCATCGCAACGCCCACTCCCGAATCGTACTCCTCTCCTTCTCCTCCGCCTCCGCTCTCTTAACTTAGCCTCTCAATCACTTCAACTCCTTTATTTCTCGCCGGCCGACGACCAATCATGGACGTCGATCCTCGCCACTACGACAACATCGTGAGTACCTTTTTCTCTCAATTTTCAATATTGAATTCTTCCAACTTTTCCTCTTTAAATTACTGATACCACTTGCTCATTTCTCTTCTCTTTGCTCGCCATTGCTCGATTACTTTGTTTCTCTTTATCTTGGTCAATTTGTGAAGTTGTAATTAGACCCTAGCCGTTCCTTACGGTATTTCACTTACTTTCACGAACACATTTTTCTAACGGTGTTGCTCTTTATCTCTTTCTTCATTGGAGGATTAATCGATCAATTGAAATTGCAGTTCGTAGTTCACTTCTCTTCTTGTTGATATTTCTCTGCTTGTTTAAAGATATCGGATATTGGACAATCATTTTCTGTTTACGTCTGGATAATTTCTATTACGTTAATGCCCAACGTTTTAGTGATGTATTGGTTACTTGTTTACATGGTGACAAAGCATTGCTATTGAGTTCAGATAGGGCGAAGTTGGTTGCTTCTATGTAAGAAATTTCCTTCTCTGATTCTTTTTGGGTGTGGAATAGTACTTATTCCACACTTAATTTCTAATTTCATTTTTCCTTATGGGTTCACAACTTCACCCTTTGAAACTTCAGTATAGGTGAATAAGAAATTGATGTTGGTTACCGCAATGGTTTTGACGAGTTTGATTCTCGTTAAATTGTTAATCTTATTAACTTGTCCCTCATTTTAAGAACTTCATTTTTCTCACATTTCATTACAGGCTGTGAACGATGGTGATATCCAGAACATTGTTCTATCGTACCTTGTTCATAATTGTTATAAAGAAACTGCAGAGTCGTTCACTACCTGTACTGGGCTTAAGCAGCACACGGATTATCTCGTCGACATGGCAAAAAGAAAAAGTTGGTGAAATTTCTCTCTTGCTAATTGGGAAGACTGATACTGTTTTTTGTGCACAAATATAGATCTACATCTAATTGCCAAATTGCCCGACCCCTCAAACGATCTGACTAATATAGATTTAATCGTTTGCCTCTCTGTAGATAGATTCTTCTGGTATGAATTGTGATTTATTTTAGAACTCTCTTGTAAGGAATAATGATCTATTTCCACTGTCTTAAGTGCCCCCAAGTTGAGGAATAAATTCATGCAAAGGAACGCAGCCTGGACACTGAATTCCTTCAAACAATCTGAATGATATGCATTTAACATTTATAATATTTGAGCTCAGCGTTAATTTAAATTTGTTTGTGTGCACTACATCTGCTTTTGTATTCCTGAAAAATTCAATCTAACTTTCCTTAATCTTTCTGTGCTTTCAGGAATTTATGATTTTGCAGTAGAAGGGAATGCACTTAAGGCCATTGAGTTAACGGAGGAGGTGGCACCTGGTCTACTTGAGAAGAATGAGGACCTTCATTTTGATCTTTTAAGCCTTCATTTTGTTGAACTTGTTTGCTCAAGGAAATGGTGAGCCCCTGCCATCATCACAACTTTATACCTTAACCTTAAAACTAGTCTCCGATGGTCAGATGGACTTTCTGTTTTACAGCTTATAACTTTTGGTTCTTATTCTTGTTTGTTTACATGGCAGCACAGAGGCCCTGGAATTTGCTCAGGTCAAGCTTGCTCCTTTTGGAAGTTGCATAAATACGTGGAAAAACTTGAAGTGCGTAGCTGGTAGCTTGACTTAGATATTCTCCATCTTTTCTTGCATTCTACTTTCTTTCCCTCATTCCTCTCTGTTGGGCAGGCTGAACCAGCTTGCATGAATATGTTGAGAAGTTTGAAATACTAATCATTATGTCGTTGTAGGATTTCATGGCCCTCCTTGCCTATGAAGAACCAGAGAAGTCTCCAATGTTTCATCTGCTTAGCGTGGATTACCGGCAAAGAGTAGCAGAAAGTCTAAATCGAGCAATTCTTGGTTTGCTCCTTTTTGTCCTTTCGTGATTTTAATCTAACCCCCTATATTGTGCAATCAACTCCTTATTCGTGTGGTCTTGGTTGATATTAGCACATGGAAATTTGCCGAGCTATACAGCAATGGAAAGGCTGATAAAGCAGGTGACTGTAGTTAGACAGTCCTTGAGCCAAGAGCTGGGCAAGGTAATCTGCAAATTCCAAATTCGTTTCCTTTCAGTTTGTAGTTAATTAGTCCTTGAGCTAAGAGCTGTAAGGCCGGTGCAATTACATTTGTGCTTCTATTGTCAATTCTTTCAATGTGCCAGCCATTTCAGTAATGTGCAAGAAATGGTTCTGATGAAAATATTGATGTGTTTATCCGCGTTATGTTATTCACCGATGCTAATTGTGCCATACAAATAATTTTAGTCGAGGAACATATTTTTGTCAGAACAAATGATATTTCCTAATTACTCAAACCTAAAATTGGTTATCTTTAGGAAAAGGGGCATTGAGGTCATTAACTGCTTGCTTCAATTACTAGATGTTTTATAAATGATTATTACTCAATATAGACTTTGTTGTGCTTGCTGACTAGAGGAACGTTCTTTTGATAATTGAGAATCCTCCTCTATCGGCTTTTCAAAGAGAGGGAGTTTGTTATGGCTTGCGGGGGTGAATGCACTATTGTGGGATCTTTGAGTTGGGGGGAGGGGTGGATAGGGACCCTTGCAAGGTTTGGCCTTGGTAGTTTCATGTTAAGTACTTAAGCACCTTGGAGAATCACAGTTTAAAAACCAGATATTGGAGTGGGAGAGCTAAACCATTTAGGTACCACATTGGTCATCCCATTCTAATACATTGGGACAAAGGCATCCCATGCTACCTTGGTTTTTACCAGTTTCATGTCTCTTCTTGGGCTTAATTGTCAAATTAAGACTATTATTCCTTAGGTAATGTTATTCAGTTGGAAGCTCCTTCTTTAGGGTTTTTGGAGGCTTGATTTTTTTAGTTTTTTTTCTTTGTTTTTAGATGTTAAGATTAAGGGGAGATGTTGGTAACTAATCTTACATATTTGTTTATATCTCTGGATTTGCAGGATGGGTTTCAATCATTTTCTTTGAGGGATTTTCTGAAAAGCTGATCCAAAGAGTTCGTTTAGGCTTACAGCACTGAGATACAACCAGCTCCAAATCTTGTTGCCACCCATGGCTGGGTATGGAAGATTGTTGCTCTCTTCACATGCCTTCGGTGCCTTGTAGGCCAAAAACCGAGTCATCTAGGTCCCTCGAGCAAAAGTTCGTTTCTTTTCAGTTTGGTGACCTCGTTGTGCCAGTGGCTTGCTTGTATTGTGATTGTACATGCTGTCTCTAATTTTGCTGCTTGCCCTATTTTCCCCCTTTTTTATTTTTCAAAATTTTTAATGTATGGAGAAATTGGCTAACATTATTTTGTCTCATAGTCATGGTACGGTTTTGGCACGGAGGAACTCTACTTTGTTGGTATCTGCGATATGGTCGGATGTGAGCTTTGTTTGTCAATGTATCTAAGGAG

mRNA sequence

GTAGTTTTCGCCGGAGCGCGTTAACAAAACTTGCGGTAAAAAAAAGGAAAAGGAAAACTGAGCATCGGGCTGCAAAACCAAAAATTCCGATACCGAGTCGGATCATTTTCATTTTCGTACCGCGCAAGTCCAAGACGAAGAGGGCCGATTTGAGAGATCGAACTCCATGAAACTTCTTCCTCCTCATCGCAACGCCCACTCCCGAATCGTACTCCTCTCCTTCTCCTCCGCCTCCGCTCTCTTAACTTAGCCTCTCAATCACTTCAACTCCTTTATTTCTCGCCGGCCGACGACCAATCATGGACGTCGATCCTCGCCACTACGACAACATCGCTGTGAACGATGGTGATATCCAGAACATTGTTCTATCGTACCTTGTTCATAATTGTTATAAAGAAACTGCAGAGTCGTTCACTACCTGTACTGGGCTTAAGCAGCACACGGATTATCTCGTCGACATGGCAAAAAGAAAAAGAATTTATGATTTTGCAGTAGAAGGGAATGCACTTAAGGCCATTGAGTTAACGGAGGAGGTGGCACCTGGTCTACTTGAGAAGAATGAGGACCTTCATTTTGATCTTTTAAGCCTTCATTTTGTTGAACTTGTTTGCTCAAGGAAATGCACAGAGGCCCTGGAATTTGCTCAGGTCAAGCTTGCTCCTTTTGGAAGTTGCATAAATACGTGGAAAAACTTGAAGATTTCATGGCCCTCCTTGCCTATGAAGAACCAGAGAAGTCTCCAATGTTTCATCTGCTTAGCGTGGATTACCGGCAAAGAGTAGCAGAAAGTCTAAATCGAGCAATTCTTGCACATGGAAATTTGCCGAGCTATACAGCAATGGAAAGGCTGATAAAGCAGGTGACTGTAGTTAGACAGTCCTTGAGCCAAGAGCTGGGCAAGGATGGGTTTCAATCATTTTCTTTGAGGGATTTTCTGAAAAGCTGATCCAAAGAGTTCGTTTAGGCTTACAGCACTGAGATACAACCAGCTCCAAATCTTGTTGCCACCCATGGCTGGGTATGGAAGATTGTTGCTCTCTTCACATGCCTTCGGTGCCTTGTAGGCCAAAAACCGAGTCATCTAGGTCCCTCGAGCAAAAGTTCGTTTCTTTTCAGTTTGGTGACCTCGTTGTGCCAGTGGCTTGCTTGTATTGTGATTGTACATGCTGTCTCTAATTTTGCTGCTTGCCCTATTTTCCCCCTTTTTTATTTTTCAAAATTTTTAATGTATGGAGAAATTGGCTAACATTATTTTGTCTCATAGTCATGGTACGGTTTTGGCACGGAGGAACTCTACTTTGTTGGTATCTGCGATATGGTCGGATGTGAGCTTTGTTTGTCAATGTATCTAAGGAG

Coding sequence (CDS)

ATGGACGTCGATCCTCGCCACTACGACAACATCGCTGTGAACGATGGTGATATCCAGAACATTGTTCTATCGTACCTTGTTCATAATTGTTATAAAGAAACTGCAGAGTCGTTCACTACCTGTACTGGGCTTAAGCAGCACACGGATTATCTCGTCGACATGGCAAAAAGAAAAAGAATTTATGATTTTGCAGTAGAAGGGAATGCACTTAAGGCCATTGAGTTAACGGAGGAGGTGGCACCTGGTCTACTTGAGAAGAATGAGGACCTTCATTTTGATCTTTTAAGCCTTCATTTTGTTGAACTTGTTTGCTCAAGGAAATGCACAGAGGCCCTGGAATTTGCTCAGGTCAAGCTTGCTCCTTTTGGAAGTTGCATAAATACGTGGAAAAACTTGAAGATTTCATGGCCCTCCTTGCCTATGAAGAACCAGAGAAGTCTCCAATGTTTCATCTGCTTAGCGTGGATTACCGGCAAAGAGTAG

Protein sequence

MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLAPFGSCINTWKNLKISWPSLPMKNQRSLQCFICLAWITGKE

Homology

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BLAST of IVF0011428 vs. ExPASy Swiss-Prot
Match: Q84WK5 (Protein GID8 homolog OS=Arabidopsis thaliana OX=3702 GN=GID8 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 4.9e-10
Identity = 39/107 (36.45%), Postives = 55/107 (51.40%), Query Frame = 0


Query: 17  DIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELT 76
           D+  +V+++LV   Y E AE F   +G K   D L  +  R  +      GN   AIE  
Sbjct: 43  DMNTLVMNFLVTEGYVEAAEKFQRESGTKPEID-LATITDRMAVKKAVQNGNVEDAIEKV 102

Query: 77  EEVAPGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLAPFG 124
            ++ P +L+ N +L F L     +EL+   K  EALEFAQ +LAP G
Sbjct: 103 NDLNPEILDTNPELFFHLQQQRLIELIRQGKTEEALEFAQEELAPRG 148

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BLAST of IVF0011428 vs. ExPASy Swiss-Prot
Match: A1L252 (Ran-binding protein 9 OS=Danio rerio OX=7955 GN=ranbp9 PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 4.1e-09
Identity = 35/86 (40.70%), Postives = 50/86 (58.14%), Query Frame = 0


Query: 18  IQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTE 77
           IQ +V SYLVH+ Y  TAE+F   T    H + L  +  R++I    + G   +AIE T+
Sbjct: 251 IQKMVASYLVHHSYCATAEAFAKSTDQAVHEE-LASIKNRQKIQKLVLSGRMGEAIETTQ 310

Query: 78  EVAPGLLEKNEDLHFDLLSLHFVELV 104
           ++ P LLE+N DL F L    F+E+V
Sbjct: 311 QLYPSLLERNPDLLFMLKVRQFIEMV 335

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BLAST of IVF0011428 vs. ExPASy Swiss-Prot
Match: Q54X16 (Glucose-induced degradation protein 8 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0279265 PE=3 SV=2)

HSP 1 Score: 60.8 bits (146), Expect = 1.6e-08
Identity = 36/113 (31.86%), Postives = 58/113 (51.33%), Query Frame = 0


Query: 11  IAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNAL 70
           + ++  D+  +V++YLV   Y+E A  F   +  +   D L  +A R  I      G+  
Sbjct: 26  VNISKSDLNKLVMNYLVIEGYQEAAAKFQEESSTQTTVD-LASIADRMAIRSAIQCGDVE 85

Query: 71  KAIELTEEVAPGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLAPFG 124
           K IE+  ++ P +L+ N  L+F L     +EL+      EAL+FAQ +LAP G
Sbjct: 86  KGIEIVNDLNPEILDTNPQLYFHLQQQKLIELIRKGMTAEALKFAQDELAPQG 137

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BLAST of IVF0011428 vs. ExPASy Swiss-Prot
Match: Q9PTY5 (Ran-binding protein 9 OS=Xenopus laevis OX=8355 GN=ranbp9 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 6.0e-08
Identity = 34/86 (39.53%), Postives = 50/86 (58.14%), Query Frame = 0


Query: 18  IQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTE 77
           IQ +V SYLVH+ Y  TAE+F   T  +   + L  +  R+RI    + G   +AIE T+
Sbjct: 221 IQRMVSSYLVHHGYCSTAEAFAKSTD-QTVQEELASIKNRQRIQKLVLSGRMGEAIETTQ 280

Query: 78  EVAPGLLEKNEDLHFDLLSLHFVELV 104
           ++ P LLE+N +L F L    F+E+V
Sbjct: 281 QLYPSLLERNPNLLFTLKVRQFIEMV 305

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BLAST of IVF0011428 vs. ExPASy Swiss-Prot
Match: Q28FM1 (Ran-binding protein 9 OS=Xenopus tropicalis OX=8364 GN=ranbp9 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 6.0e-08
Identity = 34/86 (39.53%), Postives = 50/86 (58.14%), Query Frame = 0


Query: 18  IQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTE 77
           IQ +V SYLVH+ Y  TAE+F   T  +   + L  +  R+RI    + G   +AIE T+
Sbjct: 221 IQRMVSSYLVHHGYCSTAEAFAKSTD-QTVQEELASIKNRQRIQKLVLSGRMGEAIETTQ 280

Query: 78  EVAPGLLEKNEDLHFDLLSLHFVELV 104
           ++ P LLE+N +L F L    F+E+V
Sbjct: 281 QLYPSLLERNPNLLFTLKVRQFIEMV 305

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BLAST of IVF0011428 vs. ExPASy TrEMBL
Match: A0A5A7V7L0 (Glucose-induced degradation protein 8-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold556G00130 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 3.6e-64
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRI 60
           MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRI
Sbjct: 1   MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRI 60

Query: 61  YDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA 120
           YDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA
Sbjct: 61  YDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA 120

Query: 121 PFG 124
           PFG
Sbjct: 121 PFG 123

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BLAST of IVF0011428 vs. ExPASy TrEMBL
Match: A0A1S3CRF7 (glucose-induced degradation protein 8 homolog OS=Cucumis melo OX=3656 GN=LOC103503906 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 3.6e-64
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRI 60
           MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRI
Sbjct: 1   MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRI 60

Query: 61  YDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA 120
           YDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA
Sbjct: 61  YDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA 120

Query: 121 PFG 124
           PFG
Sbjct: 121 PFG 123

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BLAST of IVF0011428 vs. ExPASy TrEMBL
Match: A0A0A0LJ37 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G865360 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.5e-62
Identity = 121/123 (98.37%), Postives = 121/123 (98.37%), Query Frame = 0


Query: 1   MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRI 60
           MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLK HTDYLVDMAKRKRI
Sbjct: 1   MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKHHTDYLVDMAKRKRI 60

Query: 61  YDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA 120
           YDFAVEGNALKAIELTEEVAPGLLEK EDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA
Sbjct: 61  YDFAVEGNALKAIELTEEVAPGLLEKIEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA 120

Query: 121 PFG 124
           PFG
Sbjct: 121 PFG 123

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BLAST of IVF0011428 vs. ExPASy TrEMBL
Match: A0A6J1BQR5 (glucose-induced degradation protein 8 homolog OS=Momordica charantia OX=3673 GN=LOC111004860 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.2e-59
Identity = 114/123 (92.68%), Postives = 119/123 (96.75%), Query Frame = 0


Query: 1   MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRI 60
           MDVDPRHYD+ A++DGDIQNIVLSYLVHNCYKETAESFT CTGLKQHTDYLVDM KRKRI
Sbjct: 1   MDVDPRHYDHRAISDGDIQNIVLSYLVHNCYKETAESFTNCTGLKQHTDYLVDMEKRKRI 60

Query: 61  YDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA 120
           YDFA+EGNALKAIELTEE+A GLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA
Sbjct: 61  YDFAIEGNALKAIELTEEIAHGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA 120

Query: 121 PFG 124
           PFG
Sbjct: 121 PFG 123

[Close]

BLAST of IVF0011428 vs. ExPASy TrEMBL
Match: A0A6J1FII7 (glucose-induced degradation protein 8 homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445791 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 4.7e-56
Identity = 111/123 (90.24%), Postives = 115/123 (93.50%), Query Frame = 0


Query: 1   MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRI 60
           MDVDPRHYD+IA+NDGD+QNIVLSYLVHNCYKETAESFT  TGLKQ TD +V M KRKRI
Sbjct: 1   MDVDPRHYDHIAINDGDVQNIVLSYLVHNCYKETAESFTASTGLKQQTDCVVGMEKRKRI 60

Query: 61  YDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA 120
           YDFAVEGNALKAIELTEEVA GLLEKNE LHFDLLSLHFVELVCSRKCTEALEFAQVKLA
Sbjct: 61  YDFAVEGNALKAIELTEEVAHGLLEKNEGLHFDLLSLHFVELVCSRKCTEALEFAQVKLA 120

Query: 121 PFG 124
           PFG
Sbjct: 121 PFG 123

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BLAST of IVF0011428 vs. NCBI nr
Match: XP_008466517.1 (PREDICTED: glucose-induced degradation protein 8 homolog [Cucumis melo])

HSP 1 Score: 255 bits (652), Expect = 8.43e-84
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRI 60
           MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRI
Sbjct: 1   MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRI 60

Query: 61  YDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA 120
           YDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA
Sbjct: 61  YDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA 120

Query: 121 PFG 123
           PFG
Sbjct: 121 PFG 123

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BLAST of IVF0011428 vs. NCBI nr
Match: KAA0063230.1 (glucose-induced degradation protein 8-like protein [Cucumis melo var. makuwa] >TYK13480.1 glucose-induced degradation protein 8-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 255 bits (652), Expect = 7.36e-83
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRI 60
           MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRI
Sbjct: 1   MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRI 60

Query: 61  YDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA 120
           YDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA
Sbjct: 61  YDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA 120

Query: 121 PFG 123
           PFG
Sbjct: 121 PFG 123

[Close]

BLAST of IVF0011428 vs. NCBI nr
Match: XP_038897027.1 (glucose-induced degradation protein 8 homolog [Benincasa hispida])

HSP 1 Score: 250 bits (639), Expect = 8.02e-82
Identity = 121/123 (98.37%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 1   MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRI 60
           MDVDPRHYD+IAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRI
Sbjct: 1   MDVDPRHYDHIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRI 60

Query: 61  YDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA 120
           YDFAVEGNALKAIELTEEVA GLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA
Sbjct: 61  YDFAVEGNALKAIELTEEVADGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA 120

Query: 121 PFG 123
           PFG
Sbjct: 121 PFG 123

[Close]

BLAST of IVF0011428 vs. NCBI nr
Match: XP_004147845.1 (glucose-induced degradation protein 8 homolog [Cucumis sativus] >KGN60001.1 hypothetical protein Csa_002003 [Cucumis sativus])

HSP 1 Score: 250 bits (638), Expect = 1.14e-81
Identity = 121/123 (98.37%), Postives = 121/123 (98.37%), Query Frame = 0


Query: 1   MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRI 60
           MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLK HTDYLVDMAKRKRI
Sbjct: 1   MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKHHTDYLVDMAKRKRI 60

Query: 61  YDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA 120
           YDFAVEGNALKAIELTEEVAPGLLEK EDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA
Sbjct: 61  YDFAVEGNALKAIELTEEVAPGLLEKIEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA 120

Query: 121 PFG 123
           PFG
Sbjct: 121 PFG 123

[Close]

BLAST of IVF0011428 vs. NCBI nr
Match: XP_022131820.1 (glucose-induced degradation protein 8 homolog [Momordica charantia])

HSP 1 Score: 240 bits (613), Expect = 7.23e-78
Identity = 114/123 (92.68%), Postives = 119/123 (96.75%), Query Frame = 0


Query: 1   MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRI 60
           MDVDPRHYD+ A++DGDIQNIVLSYLVHNCYKETAESFT CTGLKQHTDYLVDM KRKRI
Sbjct: 1   MDVDPRHYDHRAISDGDIQNIVLSYLVHNCYKETAESFTNCTGLKQHTDYLVDMEKRKRI 60

Query: 61  YDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA 120
           YDFA+EGNALKAIELTEE+A GLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA
Sbjct: 61  YDFAIEGNALKAIELTEEIAHGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA 120

Query: 121 PFG 123
           PFG
Sbjct: 121 PFG 123

[Close]

BLAST of IVF0011428 vs. TAIR 10
Match: AT1G06060.1 (LisH and RanBPM domains containing protein )

HSP 1 Score: 142.1 bits (357), Expect = 3.8e-34
Identity = 67/121 (55.37%), Postives = 90/121 (74.38%), Query Frame = 0


Query: 3   VDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYD 62
           +DPR +++  V D DI +IV+SYL+HNC+ ETA+S  + TG+KQ      +M +RK+I  
Sbjct: 1   MDPRQFEHTVVADNDIHSIVMSYLLHNCFNETADSLASSTGVKQPAIDRDNMERRKQIIH 60

Query: 63  FAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLAPF 122
           F +E  ALKA ELTE++A  LLEKN+DL FDLL LHFVEL+C+  CTEAL+F + +LAPF
Sbjct: 61  FILERKALKAFELTEQLAQDLLEKNKDLQFDLLCLHFVELICAGNCTEALKFGKTRLAPF 120

Query: 123 G 124
           G
Sbjct: 121 G 121

[Close]

BLAST of IVF0011428 vs. TAIR 10
Match: AT1G61150.1 (LisH and RanBPM domains containing protein )

HSP 1 Score: 65.9 bits (159), Expect = 3.5e-11
Identity = 39/107 (36.45%), Postives = 55/107 (51.40%), Query Frame = 0


Query: 17  DIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELT 76
           D+  +V+++LV   Y E AE F   +G K   D L  +  R  +      GN   AIE  
Sbjct: 43  DMNTLVMNFLVTEGYVEAAEKFQRESGTKPEID-LATITDRMAVKKAVQNGNVEDAIEKV 102

Query: 77  EEVAPGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLAPFG 124
            ++ P +L+ N +L F L     +EL+   K  EALEFAQ +LAP G
Sbjct: 103 NDLNPEILDTNPELFFHLQQQRLIELIRQGKTEEALEFAQEELAPRG 148

[Close]

BLAST of IVF0011428 vs. TAIR 10
Match: AT1G61150.2 (LisH and RanBPM domains containing protein )

HSP 1 Score: 65.9 bits (159), Expect = 3.5e-11
Identity = 39/107 (36.45%), Postives = 55/107 (51.40%), Query Frame = 0


Query: 17  DIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELT 76
           D+  +V+++LV   Y E AE F   +G K   D L  +  R  +      GN   AIE  
Sbjct: 26  DMNTLVMNFLVTEGYVEAAEKFQRESGTKPEID-LATITDRMAVKKAVQNGNVEDAIEKV 85

Query: 77  EEVAPGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLAPFG 124
            ++ P +L+ N +L F L     +EL+   K  EALEFAQ +LAP G
Sbjct: 86  NDLNPEILDTNPELFFHLQQQRLIELIRQGKTEEALEFAQEELAPRG 131

[Close]

BLAST of IVF0011428 vs. TAIR 10
Match: AT1G61150.4 (LisH and RanBPM domains containing protein )

HSP 1 Score: 65.9 bits (159), Expect = 3.5e-11
Identity = 39/107 (36.45%), Postives = 55/107 (51.40%), Query Frame = 0


Query: 17  DIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELT 76
           D+  +V+++LV   Y E AE F   +G K   D L  +  R  +      GN   AIE  
Sbjct: 26  DMNTLVMNFLVTEGYVEAAEKFQRESGTKPEID-LATITDRMAVKKAVQNGNVEDAIEKV 85

Query: 77  EEVAPGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLAPFG 124
            ++ P +L+ N +L F L     +EL+   K  EALEFAQ +LAP G
Sbjct: 86  NDLNPEILDTNPELFFHLQQQRLIELIRQGKTEEALEFAQEELAPRG 131

[Close]

BLAST of IVF0011428 vs. TAIR 10
Match: AT1G61150.5 (LisH and RanBPM domains containing protein )

HSP 1 Score: 65.9 bits (159), Expect = 3.5e-11
Identity = 39/107 (36.45%), Postives = 55/107 (51.40%), Query Frame = 0


Query: 17  DIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELT 76
           D+  +V+++LV   Y E AE F   +G K   D L  +  R  +      GN   AIE  
Sbjct: 20  DMNTLVMNFLVTEGYVEAAEKFQRESGTKPEID-LATITDRMAVKKAVQNGNVEDAIEKV 79

Query: 77  EEVAPGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLAPFG 124
            ++ P +L+ N +L F L     +EL+   K  EALEFAQ +LAP G
Sbjct: 80  NDLNPEILDTNPELFFHLQQQRLIELIRQGKTEEALEFAQEELAPRG 125

The following BLAST results are available for this feature:

BLAST of IVF0011428 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84WK5	4.9e-10	36.45	Protein GID8 homolog OS=Arabidopsis thaliana OX=3702 GN=GID8 PE=1 SV=1	[more]
A1L252	4.1e-09	40.70	Ran-binding protein 9 OS=Danio rerio OX=7955 GN=ranbp9 PE=2 SV=1	[more]
Q54X16	1.6e-08	31.86	Glucose-induced degradation protein 8 homolog OS=Dictyostelium discoideum OX=446...	[more]
Q9PTY5	6.0e-08	39.53	Ran-binding protein 9 OS=Xenopus laevis OX=8355 GN=ranbp9 PE=2 SV=1	[more]
Q28FM1	6.0e-08	39.53	Ran-binding protein 9 OS=Xenopus tropicalis OX=8364 GN=ranbp9 PE=2 SV=1	[more]

BLAST of IVF0011428 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V7L0	3.6e-64	100.00	Glucose-induced degradation protein 8-like protein OS=Cucumis melo var. makuwa O...	[more]
A0A1S3CRF7	3.6e-64	100.00	glucose-induced degradation protein 8 homolog OS=Cucumis melo OX=3656 GN=LOC1035...	[more]
A0A0A0LJ37	1.5e-62	98.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G865360 PE=4 SV=1	[more]
A0A6J1BQR5	1.2e-59	92.68	glucose-induced degradation protein 8 homolog OS=Momordica charantia OX=3673 GN=...	[more]
A0A6J1FII7	4.7e-56	90.24	glucose-induced degradation protein 8 homolog isoform X1 OS=Cucurbita moschata O...	[more]

BLAST of IVF0011428 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466517.1	8.43e-84	100.00	PREDICTED: glucose-induced degradation protein 8 homolog [Cucumis melo]	[more]
KAA0063230.1	7.36e-83	100.00	glucose-induced degradation protein 8-like protein [Cucumis melo var. makuwa] >T...	[more]
XP_038897027.1	8.02e-82	98.37	glucose-induced degradation protein 8 homolog [Benincasa hispida]	[more]
XP_004147845.1	1.14e-81	98.37	glucose-induced degradation protein 8 homolog [Cucumis sativus] >KGN60001.1 hypo...	[more]
XP_022131820.1	7.23e-78	92.68	glucose-induced degradation protein 8 homolog [Momordica charantia]	[more]

BLAST of IVF0011428 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G06060.1	3.8e-34	55.37	LisH and RanBPM domains containing protein	[more]
AT1G61150.1	3.5e-11	36.45	LisH and RanBPM domains containing protein	[more]
AT1G61150.2	3.5e-11	36.45	LisH and RanBPM domains containing protein	[more]
AT1G61150.4	3.5e-11	36.45	LisH and RanBPM domains containing protein	[more]
AT1G61150.5	3.5e-11	36.45	LisH and RanBPM domains containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006595	CTLH, C-terminal LisH motif	SMART	SM00668	ctlh	coord: 53..110 e-value: 3.5E-7 score: 39.9
IPR006595	CTLH, C-terminal LisH motif	PROSITE	PS50897	CTLH	coord: 53..110 score: 10.824165
IPR024964	CTLH/CRA C-terminal to LisH motif domain	PFAM	PF10607	CLTH	coord: 54..134 e-value: 2.7E-13 score: 50.1
None	No IPR available	PANTHER	PTHR12864:SF21	VACUOLAR IMPORT AND DEGRADATION PROTEIN 30	coord: 7..132
None	No IPR available	PANTHER	PTHR12864	RAN BINDING PROTEIN 9-RELATED	coord: 7..132
IPR006594	LIS1 homology motif	PROSITE	PS50896	LISH	coord: 14..46 score: 8.623757

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0011428.1	IVF0011428.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding