IVF0011387 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATCCAGTGAAGAGGAAGAGTCAGACGAAAACTATGGATCCGACAAAGAGGAACAATCAAGCAAAAACTATGGATCCGACGAAGAGGAACAATCCAACTAAGAGGAACAGTCTGGGTCCGGATTGTAGAGGAAGACGATGAGAGGCAAAGAGGAAGACGGTGTACAGAGGAAGAAGATGAGTGAAAGAGGAAGATGATGATTATTTTGGGAAGACTATGAAGATAAGAGGAAAAGAAAACCAATAA ATGGATCCAGTGAAGAGGAAGAGTCAGACGAAAACTATGGATCCGACAAAGAGGAACAATCAAGCAAAAACTATGGATCCGACGAAGAGGAACAATCCAACTAAGAGGAACAGTCTGGGTCCGGATTTGAAAGAGGAAGATGATGATTATTTTGGGAAGACTATGAAGATAAGAGGAAAAGAAAACCAATAA ATGGATCCAGTGAAGAGGAAGAGTCAGACGAAAACTATGGATCCGACAAAGAGGAACAATCAAGCAAAAACTATGGATCCGACGAAGAGGAACAATCCAACTAAGAGGAACAGTCTGGGTCCGGATTTGAAAGAGGAAGATGATGATTATTTTGGGAAGACTATGAAGATAAGAGGAAAAGAAAACCAATAA MDPVKRKSQTKTMDPTKRNNQAKTMDPTKRNNPTKRNSLGPDLKEEDDDYFGKTMKIRGKENQ Homology
BLAST of IVF0011387 vs. ExPASy TrEMBL
Match: A0A5A7UXT0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold340G00860 PE=4 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 7.6e-10 Identity = 40/50 (80.00%), Postives = 42/50 (84.00%), Query Frame = 0
BLAST of IVF0011387 vs. ExPASy TrEMBL
Match: A0A5D3DFL7 (Collagen triple helix repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold333G001450 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 2.7e-07 Identity = 32/38 (84.21%), Postives = 35/38 (92.11%), Query Frame = 0
BLAST of IVF0011387 vs. ExPASy TrEMBL
Match: A0A5A7UD84 (Collagen triple helix repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G001290 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 1.0e-06 Identity = 31/38 (81.58%), Postives = 35/38 (92.11%), Query Frame = 0
BLAST of IVF0011387 vs. NCBI nr
Match: KAA0060038.1 (hypothetical protein E6C27_scaffold340G00860 [Cucumis melo var. makuwa]) HSP 1 Score: 71.2 bits (173), Expect = 1.07e-14 Identity = 40/50 (80.00%), Postives = 42/50 (84.00%), Query Frame = 0
BLAST of IVF0011387 vs. NCBI nr
Match: TYK22248.1 (Collagen triple helix repeat protein [Cucumis melo var. makuwa]) HSP 1 Score: 62.8 bits (151), Expect = 2.32e-11 Identity = 32/38 (84.21%), Postives = 35/38 (92.11%), Query Frame = 0
BLAST of IVF0011387 vs. NCBI nr
Match: KAA0051389.1 (Collagen triple helix repeat protein [Cucumis melo var. makuwa]) HSP 1 Score: 60.8 bits (146), Expect = 1.34e-10 Identity = 31/38 (81.58%), Postives = 35/38 (92.11%), Query Frame = 0
BLAST of IVF0011387 vs. NCBI nr
Match: TYK01567.1 (putative transposable element-related protein [Cucumis melo var. makuwa]) HSP 1 Score: 46.2 bits (108), Expect = 6.71e-04 Identity = 24/28 (85.71%), Postives = 25/28 (89.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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