Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTAACCTCATATTTGAACCGACCATTCTGCTTTAAAGGAGCCTACTTCAAACGTTGGAAGCAGAAGATGTTATTTTTCTTAACTCTAAAAAAGGTTGCCACTACATGCACCAACGAAGAGCTAAAAGTTCCCAAGATTGATCCAATCGAGGAGCAACTCCAGGCTCAGACCACATGGACAGAGTCAGATTTTATTTGTAAAAATCTCATATTTAATGGACTTACTGACGAACTCTATGATTATTACAGTACTATCTCCACAATGAAAGAAGTCTGGGATGCATTACAAAAGAAGTACGACACTGAAGAAGCTGGATCCAAGAAGTATGCAGTAAGTCAATACTTGTGGTACCATATGGTTGATGATAAATTAGTTGAAGTTCAATCACACAAATTGCAAAAGATTGCCCGCAAAATAATAAGTGAAGGTATGCCTTTAGATGAATAATTTCACGTTGCTGTTATTATTGACAAGCTACCTCCACTATGGAAGGACTTTAAAAATACCCTAAAGCATAAGATGAAGGAGTTCTCTCTGGAGAGCCAGATCACTCGACTGTGA
mRNA sequence
ATGCTAACCTCATATTTGAACCGACCATTCTGCTTTAAAGGAGCCTACTTCAAACGTTGGAAGCAGAAGATGTTATTTTTCTTAACTCTAAAAAAGGTTGCCACTACATGCACCAACGAAGAGCTAAAAGTTCCCAAGATTGATCCAATCGAGGAGCAACTCCAGGCTCAGACCACATGGACAGAGTCAGATTTTATTTGTAAAAATCTCATATTTAATGGACTTACTGACGAACTCTATGATTATTACAGTACTATCTCCACAATGAAAGAAGTCTGGGATGCATTACAAAAGAAGTACGACACTGAAGAAGCTGGATCCAAGAAGTATGCAGTAAGTCAATACTTGTGGTACCATATGCTACCTCCACTATGGAAGGACTTTAAAAATACCCTAAAGCATAAGATGAAGGAGTTCTCTCTGGAGAGCCAGATCACTCGACTGTGA
Coding sequence (CDS)
ATGCTAACCTCATATTTGAACCGACCATTCTGCTTTAAAGGAGCCTACTTCAAACGTTGGAAGCAGAAGATGTTATTTTTCTTAACTCTAAAAAAGGTTGCCACTACATGCACCAACGAAGAGCTAAAAGTTCCCAAGATTGATCCAATCGAGGAGCAACTCCAGGCTCAGACCACATGGACAGAGTCAGATTTTATTTGTAAAAATCTCATATTTAATGGACTTACTGACGAACTCTATGATTATTACAGTACTATCTCCACAATGAAAGAAGTCTGGGATGCATTACAAAAGAAGTACGACACTGAAGAAGCTGGATCCAAGAAGTATGCAGTAAGTCAATACTTGTGGTACCATATGCTACCTCCACTATGGAAGGACTTTAAAAATACCCTAAAGCATAAGATGAAGGAGTTCTCTCTGGAGAGCCAGATCACTCGACTGTGA
Protein sequence
MLTSYLNRPFCFKGAYFKRWKQKMLFFLTLKKVATTCTNEELKVPKIDPIEEQLQAQTTWTESDFICKNLIFNGLTDELYDYYSTISTMKEVWDALQKKYDTEEAGSKKYAVSQYLWYHMLPPLWKDFKNTLKHKMKEFSLESQITRL
Homology
BLAST of IVF0011273 vs. ExPASy TrEMBL
Match:
A0A5A7TGJ2 (Receptor-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G00180 PE=4 SV=1)
HSP 1 Score: 233.8 bits (595), Expect = 4.6e-58
Identity = 112/115 (97.39%), Postives = 112/115 (97.39%), Query Frame = 0
Query: 1 MLTSYLNRPFCFKGAYFKRWKQKMLFFLTLKKVATTCTNEELKVPKIDPIEEQLQAQTTW 60
MLTSYLNRPFCFKGAYFKRWKQKMLFFLTLKKVATTCTNEELKVPKIDPIEEQLQAQTTW
Sbjct: 9 MLTSYLNRPFCFKGAYFKRWKQKMLFFLTLKKVATTCTNEELKVPKIDPIEEQLQAQTTW 68
Query: 61 TESDFICKNLIFNGLTDELYDYYSTISTMKEVWDALQKKYDTEEAGSKKYAVSQY 116
TESDFICKNLIFNGLTDELYDYYSTISTMKEVWDALQKKYDTEEAGSKKYA Y
Sbjct: 69 TESDFICKNLIFNGLTDELYDYYSTISTMKEVWDALQKKYDTEEAGSKKYAEEVY 123
BLAST of IVF0011273 vs. ExPASy TrEMBL
Match:
A0A5D3DC59 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold682G00340 PE=4 SV=1)
HSP 1 Score: 221.5 bits (563), Expect = 2.4e-54
Identity = 117/187 (62.57%), Postives = 131/187 (70.05%), Query Frame = 0
Query: 1 MLTSYLNRPFCFKGAYFKRWKQKMLFFLTLKKVATTCTNEELKVPKIDPIEEQLQAQTTW 60
+++S LNRPF F+GA+FKRWKQKMLFFLTLKKVAT CT E+LKV + DPIEEQL+ TW
Sbjct: 9 LMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKLKVSEKDPIEEQLKNLATW 68
Query: 61 TESDFICKNLIFNGLTDELYDYYSTISTMKEVWDALQKKYDTEEAGSKKYAVSQYLWYHM 120
TE+DFICKNLI NGLTDELYDYYST++T KEVWDALQKKYDT+EA SKKYAVS+YL Y M
Sbjct: 69 TETDFICKNLILNGLTDELYDYYSTMTTGKEVWDALQKKYDTKEARSKKYAVSRYLRYQM 128
Query: 121 ---------------------------------------LPPLWKDFKNTLKHKMKEFSL 149
LP LWKDFKNTL+HK KEFSL
Sbjct: 129 TDDKSVETQSHEIQKIAHEIISEGMPLDDQFQVAVIIDKLPQLWKDFKNTLRHKTKEFSL 188
BLAST of IVF0011273 vs. ExPASy TrEMBL
Match:
A0A5A7UYY4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00440 PE=4 SV=1)
HSP 1 Score: 220.3 bits (560), Expect = 5.3e-54
Identity = 116/187 (62.03%), Postives = 130/187 (69.52%), Query Frame = 0
Query: 1 MLTSYLNRPFCFKGAYFKRWKQKMLFFLTLKKVATTCTNEELKVPKIDPIEEQLQAQTTW 60
+++S LNR F F+GA+FKRWKQK+LFFLTLKKVAT CT E+ KV + DP EEQL+ TW
Sbjct: 9 LMSSDLNRLFRFEGAHFKRWKQKLLFFLTLKKVATACTTEKPKVSEKDPTEEQLKNLATW 68
Query: 61 TESDFICKNLIFNGLTDELYDYYSTISTMKEVWDALQKKYDTEEAGSKKYAVSQYLWYHM 120
TE+DFICKNLI NGLTDELYDYYST++T KEVWDALQKKYDTEEAGSKKYAVS+YL Y M
Sbjct: 69 TETDFICKNLILNGLTDELYDYYSTMTTAKEVWDALQKKYDTEEAGSKKYAVSRYLRYQM 128
Query: 121 ---------------------------------------LPPLWKDFKNTLKHKMKEFSL 149
LPPLWKDFKNTL+HK KEFSL
Sbjct: 129 TDDKSVEAQSHEIQKIAHEIISEGMPLDDQFQVVVIIDKLPPLWKDFKNTLRHKTKEFSL 188
BLAST of IVF0011273 vs. ExPASy TrEMBL
Match:
A0A5D3BDS3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold487G00230 PE=4 SV=1)
HSP 1 Score: 216.9 bits (551), Expect = 5.9e-53
Identity = 114/187 (60.96%), Postives = 131/187 (70.05%), Query Frame = 0
Query: 1 MLTSYLNRPFCFKGAYFKRWKQKMLFFLTLKKVATTCTNEELKVPKIDPIEEQLQAQTTW 60
+++S LNRPF F+GA+FKRWKQKMLFFLTLKKVAT CT E+ KV + DP +EQL+ TTW
Sbjct: 5 LMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTIEKPKVSEKDPTKEQLKNLTTW 64
Query: 61 TESDFICKNLIFNGLTDELYDYYSTISTMKEVWDALQKKYDTEEAGSKKYAVSQYLWYHM 120
TE+DFICKNLI NGLTDELYDYYST++T K+VW+ALQKKYDTEEAGSKKYAVS+YL Y M
Sbjct: 65 TETDFICKNLILNGLTDELYDYYSTMTTAKQVWEALQKKYDTEEAGSKKYAVSRYLRYQM 124
Query: 121 ---------------------------------------LPPLWKDFKNTLKHKMKEFSL 149
LP LWKDFKNTL+HK KEFSL
Sbjct: 125 TDDRSVEAQSHEIQKIAHEIINEGMPLDDQFQVTIIIDKLPLLWKDFKNTLRHKTKEFSL 184
BLAST of IVF0011273 vs. ExPASy TrEMBL
Match:
A0A5A7UA92 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1166G00260 PE=4 SV=1)
HSP 1 Score: 212.2 bits (539), Expect = 1.4e-51
Identity = 112/187 (59.89%), Postives = 129/187 (68.98%), Query Frame = 0
Query: 1 MLTSYLNRPFCFKGAYFKRWKQKMLFFLTLKKVATTCTNEELKVPKIDPIEEQLQAQTTW 60
+++S LNRPF F+GA+FKRWKQKMLFFLTLKKVAT CT E+ KV + DP +EQL+ TTW
Sbjct: 5 LMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKPKVSEKDPTKEQLKNLTTW 64
Query: 61 TESDFICKNLIFNGLTDELYDYYSTISTMKEVWDALQKKYDTEEAGSKKYAVSQYLWYHM 120
TE+DFICKNLI NGLTDELYDYYST++T K+VW+ALQKKYDTEEAGSKKYAVS+YL Y M
Sbjct: 65 TETDFICKNLILNGLTDELYDYYSTMTTAKQVWEALQKKYDTEEAGSKKYAVSRYLRYQM 124
Query: 121 ---------------------------------------LPPLWKDFKNTLKHKMKEFSL 149
L LWKDFKNTL+HK KEFSL
Sbjct: 125 TDDRSVEAQSHEIQKIAHEIINEGMPLDDQFQVTIIIDKLLLLWKDFKNTLRHKTKEFSL 184
BLAST of IVF0011273 vs. NCBI nr
Match:
KAA0040535.1 (receptor-like protein 12 [Cucumis melo var. makuwa] >TYK05577.1 receptor-like protein 12 [Cucumis melo var. makuwa])
HSP 1 Score: 234 bits (596), Expect = 2.52e-76
Identity = 112/115 (97.39%), Postives = 112/115 (97.39%), Query Frame = 0
Query: 1 MLTSYLNRPFCFKGAYFKRWKQKMLFFLTLKKVATTCTNEELKVPKIDPIEEQLQAQTTW 60
MLTSYLNRPFCFKGAYFKRWKQKMLFFLTLKKVATTCTNEELKVPKIDPIEEQLQAQTTW
Sbjct: 9 MLTSYLNRPFCFKGAYFKRWKQKMLFFLTLKKVATTCTNEELKVPKIDPIEEQLQAQTTW 68
Query: 61 TESDFICKNLIFNGLTDELYDYYSTISTMKEVWDALQKKYDTEEAGSKKYAVSQY 115
TESDFICKNLIFNGLTDELYDYYSTISTMKEVWDALQKKYDTEEAGSKKYA Y
Sbjct: 69 TESDFICKNLIFNGLTDELYDYYSTISTMKEVWDALQKKYDTEEAGSKKYAEEVY 123
BLAST of IVF0011273 vs. NCBI nr
Match:
KAA0060458.1 (uncharacterized protein E6C27_scaffold22G002860 [Cucumis melo var. makuwa] >TYK18543.1 uncharacterized protein E5676_scaffold119G00440 [Cucumis melo var. makuwa])
HSP 1 Score: 220 bits (561), Expect = 2.62e-70
Identity = 116/187 (62.03%), Postives = 130/187 (69.52%), Query Frame = 0
Query: 1 MLTSYLNRPFCFKGAYFKRWKQKMLFFLTLKKVATTCTNEELKVPKIDPIEEQLQAQTTW 60
+++S LNR F F+GA+FKRWKQK+LFFLTLKKVAT CT E+ KV + DP EEQL+ TW
Sbjct: 9 LMSSDLNRLFRFEGAHFKRWKQKLLFFLTLKKVATACTTEKPKVSEKDPTEEQLKNLATW 68
Query: 61 TESDFICKNLIFNGLTDELYDYYSTISTMKEVWDALQKKYDTEEAGSKKYAVSQYLWYHM 120
TE+DFICKNLI NGLTDELYDYYST++T KEVWDALQKKYDTEEAGSKKYAVS+YL Y M
Sbjct: 69 TETDFICKNLILNGLTDELYDYYSTMTTAKEVWDALQKKYDTEEAGSKKYAVSRYLRYQM 128
Query: 121 ---------------------------------------LPPLWKDFKNTLKHKMKEFSL 148
LPPLWKDFKNTL+HK KEFSL
Sbjct: 129 TDDKSVEAQSHEIQKIAHEIISEGMPLDDQFQVVVIIDKLPPLWKDFKNTLRHKTKEFSL 188
BLAST of IVF0011273 vs. NCBI nr
Match:
KAA0065374.1 (uncharacterized protein E6C27_scaffold17G00360 [Cucumis melo var. makuwa] >TYK20869.1 uncharacterized protein E5676_scaffold682G00340 [Cucumis melo var. makuwa])
HSP 1 Score: 221 bits (564), Expect = 6.62e-66
Identity = 117/187 (62.57%), Postives = 131/187 (70.05%), Query Frame = 0
Query: 1 MLTSYLNRPFCFKGAYFKRWKQKMLFFLTLKKVATTCTNEELKVPKIDPIEEQLQAQTTW 60
+++S LNRPF F+GA+FKRWKQKMLFFLTLKKVAT CT E+LKV + DPIEEQL+ TW
Sbjct: 9 LMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKLKVSEKDPIEEQLKNLATW 68
Query: 61 TESDFICKNLIFNGLTDELYDYYSTISTMKEVWDALQKKYDTEEAGSKKYAVSQYLWYHM 120
TE+DFICKNLI NGLTDELYDYYST++T KEVWDALQKKYDT+EA SKKYAVS+YL Y M
Sbjct: 69 TETDFICKNLILNGLTDELYDYYSTMTTGKEVWDALQKKYDTKEARSKKYAVSRYLRYQM 128
Query: 121 ---------------------------------------LPPLWKDFKNTLKHKMKEFSL 148
LP LWKDFKNTL+HK KEFSL
Sbjct: 129 TDDKSVETQSHEIQKIAHEIISEGMPLDDQFQVAVIIDKLPQLWKDFKNTLRHKTKEFSL 188
BLAST of IVF0011273 vs. NCBI nr
Match:
TYJ98000.1 (hypothetical protein E5676_scaffold487G00230 [Cucumis melo var. makuwa])
HSP 1 Score: 217 bits (552), Expect = 4.25e-65
Identity = 114/187 (60.96%), Postives = 131/187 (70.05%), Query Frame = 0
Query: 1 MLTSYLNRPFCFKGAYFKRWKQKMLFFLTLKKVATTCTNEELKVPKIDPIEEQLQAQTTW 60
+++S LNRPF F+GA+FKRWKQKMLFFLTLKKVAT CT E+ KV + DP +EQL+ TTW
Sbjct: 5 LMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTIEKPKVSEKDPTKEQLKNLTTW 64
Query: 61 TESDFICKNLIFNGLTDELYDYYSTISTMKEVWDALQKKYDTEEAGSKKYAVSQYLWYHM 120
TE+DFICKNLI NGLTDELYDYYST++T K+VW+ALQKKYDTEEAGSKKYAVS+YL Y M
Sbjct: 65 TETDFICKNLILNGLTDELYDYYSTMTTAKQVWEALQKKYDTEEAGSKKYAVSRYLRYQM 124
Query: 121 ---------------------------------------LPPLWKDFKNTLKHKMKEFSL 148
LP LWKDFKNTL+HK KEFSL
Sbjct: 125 TDDRSVEAQSHEIQKIAHEIINEGMPLDDQFQVTIIIDKLPLLWKDFKNTLRHKTKEFSL 184
BLAST of IVF0011273 vs. NCBI nr
Match:
KAA0050358.1 (uncharacterized protein E6C27_scaffold88G00900 [Cucumis melo var. makuwa] >TYK03571.1 uncharacterized protein E5676_scaffold293G00700 [Cucumis melo var. makuwa])
HSP 1 Score: 207 bits (527), Expect = 1.98e-64
Identity = 111/187 (59.36%), Postives = 125/187 (66.84%), Query Frame = 0
Query: 1 MLTSYLNRPFCFKGAYFKRWKQKMLFFLTLKKVATTCTNEELKVPKIDPIEEQLQAQTTW 60
+++ LN PF F+GA+FKRWKQKMLFFLTLKKVATTCT E+LKV + DP EEQL+ TW
Sbjct: 9 LMSFDLNCPFRFEGAHFKRWKQKMLFFLTLKKVATTCTTEKLKVSEKDPTEEQLKNLATW 68
Query: 61 TESDFICKNLIFNGLTDELYDYYSTISTMKEVWDALQKKYDTEEAGSKKYAVSQYLWYHM 120
TE+DFI KNLI NGLTDELYDYYST++T KEVWDA QKKYDTEE GSKKYAV+ YL Y +
Sbjct: 69 TETDFIYKNLILNGLTDELYDYYSTMTTAKEVWDAQQKKYDTEETGSKKYAVNPYLRYQI 128
Query: 121 ---------------------------------------LPPLWKDFKNTLKHKMKEFSL 148
LP LWKDFKNTL+HK K FSL
Sbjct: 129 TNDRSVEAQSHEIQKIAHEIISEGMPLDDQFQVAVIIDKLPSLWKDFKNTLRHKTKVFSL 188
BLAST of IVF0011273 vs. TAIR 10
Match:
AT4G00980.1 (zinc knuckle (CCHC-type) family protein )
HSP 1 Score: 48.9 bits (115), Expect = 4.1e-06
Identity = 34/119 (28.57%), Postives = 55/119 (46.22%), Query Frame = 0
Query: 12 FKGAYFKRWKQKMLFFLTLKKVATTCTNE-----ELKVPKIDPIEEQLQAQTT---WTES 71
F G + W +M FL K+ + + P+ +P E +A T W
Sbjct: 198 FDGKSYLYWASQMELFLKQLKLTYVLSEPCPSIGSSQGPETNP-REITRADATGKKWLRD 257
Query: 72 DFICKNLIFNGLTDELYDYYS-TISTMKEVWDALQKKYDTEEAGSKKYAVSQYLWYHML 122
D++C + N L+D LY YS KE+WD L+ Y +E+ SK+ V +Y+ + M+
Sbjct: 258 DYLCYTHLMNSLSDHLYRRYSQKFKHAKELWDELKWVYQCDESKSKRSQVRKYIEFRMV 315
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7TGJ2 | 4.6e-58 | 97.39 | Receptor-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... | [more] |
A0A5D3DC59 | 2.4e-54 | 62.57 | Reverse transcriptase Ty1/copia-type domain-containing protein OS=Cucumis melo v... | [more] |
A0A5A7UYY4 | 5.3e-54 | 62.03 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5D3BDS3 | 5.9e-53 | 60.96 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7UA92 | 1.4e-51 | 59.89 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
KAA0040535.1 | 2.52e-76 | 97.39 | receptor-like protein 12 [Cucumis melo var. makuwa] >TYK05577.1 receptor-like pr... | [more] |
KAA0060458.1 | 2.62e-70 | 62.03 | uncharacterized protein E6C27_scaffold22G002860 [Cucumis melo var. makuwa] >TYK1... | [more] |
KAA0065374.1 | 6.62e-66 | 62.57 | uncharacterized protein E6C27_scaffold17G00360 [Cucumis melo var. makuwa] >TYK20... | [more] |
TYJ98000.1 | 4.25e-65 | 60.96 | hypothetical protein E5676_scaffold487G00230 [Cucumis melo var. makuwa] | [more] |
KAA0050358.1 | 1.98e-64 | 59.36 | uncharacterized protein E6C27_scaffold88G00900 [Cucumis melo var. makuwa] >TYK03... | [more] |
Match Name | E-value | Identity | Description | |
AT4G00980.1 | 4.1e-06 | 28.57 | zinc knuckle (CCHC-type) family protein | [more] |