IVF0011270 (gene) Melon (IVF77) v1

Overview


Name	IVF0011270
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Retrotrans_gag domain-containing protein
Location	chr06: 16918975 .. 16920018 (+)
RNA-Seq Expression	IVF0011270
Synteny	IVF0011270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGAGCAAACCAATGATCAGGTTCAAGCAGTTCGTCAAGACGTTGAAGGATTGAAAGATCAATTGGCAAAGATCTTGGAACTGCTCACTACTGGAAGAGGAAAGAGTGTTGCAGGGACTTCATCACAAGTGGAAGTAGATCTAAACCAGGTACTAGAGGACATTCTTGCATACCCTCCAAGTTTTACTCCTCAAAGGCCGTCTAGTCCACGCATGGTGGATAGGACATATCCTACATCTTTTCCAGCACCAAATCCTAACACAACCACCCAACAGGCAGCCCATGTGAGTGATCTCATATCTACTCCAATTACGAAAAGTGGTAAGAAAATTTCAGAAGAGCAGGGTAGTAGAAAAAGATTAGAATTTCTAGAAGAAAGATTGTGCACCATTGAAGGTATAGACATGTACGAAAGTATCGACGCAACACAACTATGTTTAATATCAGATGTGGTGATCCCTCTCAAATTCAAGATTCCAGATTTTGAGAAGTACAATGGAACCACGTGCCCAAAAAGTCATCTAGTTATGTATTGTCGGAAAATGTCAACTTACGCTCATGATGATAAATTGTTGATTCATCGCTTCCAAGACAGCTTAGTTGGTCCAGCTTCTCGTTGGTACATGCAGTTTGATGGCTCACAAGTGCATAGGTGGAATGATCTCGCCGATTCATTTTTAAAACAATATAAGTACAATATTGATATGGCACCTGACCATTTGGATCTTCAAAGGATGGAAAAAAGGAATGTTGAAACTTTTAAGGAATATGCACAACGATGGAGAGAGTTAGTTGCACAAGTGCAACCTCCCCTAACCGACAAAGAATTGACAGCCATTTTCATAAACACTCTTCGGGCCCCATACTATGATAGAATGGTTGGAAGTGCTTCGACTAATTTCTCAGACGTCATAAGAATTGGGGAGAGGATTGAATTTGGAGTGAAGAATGAAAGGATCACCGATTTTTCTTCAGAGACAAGAAGGATGATGACCCTAAAGAAGAAAGAGGAAGAAATACATGAGTTGAGCTCGACTTAA

mRNA sequence

ATGGATGAGCAAACCAATGATCAGGTTCAAGCAGTTCGTCAAGACGTTGAAGGATTGAAAGATCAATTGGCAAAGATCTTGGAACTGCTCACTACTGGAAGAGGAAAGAGTGTTGCAGGGACTTCATCACAAGTGGAAGTAGATCTAAACCAGGTACTAGAGGACATTCTTGCATACCCTCCAAGTTTTACTCCTCAAAGGCCGTCTAGTCCACGCATGGTGGATAGGACATATCCTACATCTTTTCCAGCACCAAATCCTAACACAACCACCCAACAGGCAGCCCATGTGAGTGATCTCATATCTACTCCAATTACGAAAAGTGGTAAGAAAATTTCAGAAGAGCAGGGTAGTAGAAAAAGATTAGAATTTCTAGAAGAAAGATTGTGCACCATTGAAGGTATAGACATGTACGAAAGTATCGACGCAACACAACTATGTTTAATATCAGATGTGGTGATCCCTCTCAAATTCAAGATTCCAGATTTTGAGAAGTACAATGGAACCACGTGCCCAAAAAGTCATCTAGTTATGTATTGTCGGAAAATGTCAACTTACGCTCATGATGATAAATTGTTGATTCATCGCTTCCAAGACAGCTTAGTTGGTCCAGCTTCTCGTTGGTACATGCAGTTTGATGGCTCACAAGTGCATAGGTGGAATGATCTCGCCGATTCATTTTTAAAACAATATAAGTACAATATTGATATGGCACCTGACCATTTGGATCTTCAAAGGATGGAAAAAAGGAATGTTGAAACTTTTAAGGAATATGCACAACGATGGAGAGAGTTAGTTGCACAAGTGCAACCTCCCCTAACCGACAAAGAATTGACAGCCATTTTCATAAACACTCTTCGGGCCCCATACTATGATAGAATGGTTGGAAGTGCTTCGACTAATTTCTCAGACGTCATAAGAATTGGGGAGAGGATTGAATTTGGAGTGAAGAATGAAAGGATCACCGATTTTTCTTCAGAGACAAGAAGGATGATGACCCTAAAGAAGAAAGAGGAAGAAATACATGAGTTGAGCTCGACTTAA

Coding sequence (CDS)

ATGGATGAGCAAACCAATGATCAGGTTCAAGCAGTTCGTCAAGACGTTGAAGGATTGAAAGATCAATTGGCAAAGATCTTGGAACTGCTCACTACTGGAAGAGGAAAGAGTGTTGCAGGGACTTCATCACAAGTGGAAGTAGATCTAAACCAGGTACTAGAGGACATTCTTGCATACCCTCCAAGTTTTACTCCTCAAAGGCCGTCTAGTCCACGCATGGTGGATAGGACATATCCTACATCTTTTCCAGCACCAAATCCTAACACAACCACCCAACAGGCAGCCCATGTGAGTGATCTCATATCTACTCCAATTACGAAAAGTGGTAAGAAAATTTCAGAAGAGCAGGGTAGTAGAAAAAGATTAGAATTTCTAGAAGAAAGATTGTGCACCATTGAAGGTATAGACATGTACGAAAGTATCGACGCAACACAACTATGTTTAATATCAGATGTGGTGATCCCTCTCAAATTCAAGATTCCAGATTTTGAGAAGTACAATGGAACCACGTGCCCAAAAAGTCATCTAGTTATGTATTGTCGGAAAATGTCAACTTACGCTCATGATGATAAATTGTTGATTCATCGCTTCCAAGACAGCTTAGTTGGTCCAGCTTCTCGTTGGTACATGCAGTTTGATGGCTCACAAGTGCATAGGTGGAATGATCTCGCCGATTCATTTTTAAAACAATATAAGTACAATATTGATATGGCACCTGACCATTTGGATCTTCAAAGGATGGAAAAAAGGAATGTTGAAACTTTTAAGGAATATGCACAACGATGGAGAGAGTTAGTTGCACAAGTGCAACCTCCCCTAACCGACAAAGAATTGACAGCCATTTTCATAAACACTCTTCGGGCCCCATACTATGATAGAATGGTTGGAAGTGCTTCGACTAATTTCTCAGACGTCATAAGAATTGGGGAGAGGATTGAATTTGGAGTGAAGAATGAAAGGATCACCGATTTTTCTTCAGAGACAAGAAGGATGATGACCCTAAAGAAGAAAGAGGAAGAAATACATGAGTTGAGCTCGACTTAA

Protein sequence

MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDILAYPPSFTPQRPSSPRMVDRTYPTSFPAPNPNTTTQQAAHVSDLISTPITKSGKKISEEQGSRKRLEFLEERLCTIEGIDMYESIDATQLCLISDVVIPLKFKIPDFEKYNGTTCPKSHLVMYCRKMSTYAHDDKLLIHRFQDSLVGPASRWYMQFDGSQVHRWNDLADSFLKQYKYNIDMAPDHLDLQRMEKRNVETFKEYAQRWRELVAQVQPPLTDKELTAIFINTLRAPYYDRMVGSASTNFSDVIRIGERIEFGVKNERITDFSSETRRMMTLKKKEEEIHELSST

Homology

[Close]

BLAST of IVF0011270 vs. ExPASy TrEMBL
Match: A0A5A7V1Y8 (Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold420G00010 PE=4 SV=1)

HSP 1 Score: 689.1 bits (1777), Expect = 9.4e-195
Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 0


Query: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDILAYP 60
           MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDILAYP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDILAYP 60

Query: 61  PSFTPQRPSSPRMVDRTYPTSFPAPNPNTTTQQAAHVSDLISTPITKSGKKISEEQGSRK 120
           PSFTPQRPSSPRMVDRTYPTSFPAPNPNTTTQQAAHVSDLISTPITKSGKKISEEQGSRK
Sbjct: 61  PSFTPQRPSSPRMVDRTYPTSFPAPNPNTTTQQAAHVSDLISTPITKSGKKISEEQGSRK 120

Query: 121 RLEFLEERLCTIEGIDMYESIDATQLCLISDVVIPLKFKIPDFEKYNGTTCPKSHLVMYC 180
           RLEFLEERLCTIEGIDMYESIDATQLCLISDVVIPLKFKIPDFEKYNGTTCPKSHLVMYC
Sbjct: 121 RLEFLEERLCTIEGIDMYESIDATQLCLISDVVIPLKFKIPDFEKYNGTTCPKSHLVMYC 180

Query: 181 RKMSTYAHDDKLLIHRFQDSLVGPASRWYMQFDGSQVHRWNDLADSFLKQYKYNIDMAPD 240
           RKMSTYAHDDKLLIHRFQDSLVGPASRWYMQFDGSQVHRWNDLADSFLKQYKYNIDMAPD
Sbjct: 181 RKMSTYAHDDKLLIHRFQDSLVGPASRWYMQFDGSQVHRWNDLADSFLKQYKYNIDMAPD 240

Query: 241 HLDLQRMEKRNVETFKEYAQRWRELVAQVQPPLTDKELTAIFINTLRAPYYDRMVGSAST 300
           HLDLQRMEKRNVETFKEYAQRWRELVAQVQPPLTDKELTAIFINTLRAPYYDRMVGSAST
Sbjct: 241 HLDLQRMEKRNVETFKEYAQRWRELVAQVQPPLTDKELTAIFINTLRAPYYDRMVGSAST 300

Query: 301 NFSDVIRIGERIEFGVKNERITDFSSETRRMMTLKKKEEEIHELSST 348
           NFSDVIRIGERIEFGVKNERITDFSSETRRMMTLKKKEEEIHELSST
Sbjct: 301 NFSDVIRIGERIEFGVKNERITDFSSETRRMMTLKKKEEEIHELSST 347

[Close]

BLAST of IVF0011270 vs. ExPASy TrEMBL
Match: A0A1S3BTL0 (uncharacterized protein LOC103493407 OS=Cucumis melo OX=3656 GN=LOC103493407 PE=4 SV=1)

HSP 1 Score: 689.1 bits (1777), Expect = 9.4e-195
Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 0


Query: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDILAYP 60
           MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDILAYP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDILAYP 60

Query: 61  PSFTPQRPSSPRMVDRTYPTSFPAPNPNTTTQQAAHVSDLISTPITKSGKKISEEQGSRK 120
           PSFTPQRPSSPRMVDRTYPTSFPAPNPNTTTQQAAHVSDLISTPITKSGKKISEEQGSRK
Sbjct: 61  PSFTPQRPSSPRMVDRTYPTSFPAPNPNTTTQQAAHVSDLISTPITKSGKKISEEQGSRK 120

Query: 121 RLEFLEERLCTIEGIDMYESIDATQLCLISDVVIPLKFKIPDFEKYNGTTCPKSHLVMYC 180
           RLEFLEERLCTIEGIDMYESIDATQLCLISDVVIPLKFKIPDFEKYNGTTCPKSHLVMYC
Sbjct: 121 RLEFLEERLCTIEGIDMYESIDATQLCLISDVVIPLKFKIPDFEKYNGTTCPKSHLVMYC 180

Query: 181 RKMSTYAHDDKLLIHRFQDSLVGPASRWYMQFDGSQVHRWNDLADSFLKQYKYNIDMAPD 240
           RKMSTYAHDDKLLIHRFQDSLVGPASRWYMQFDGSQVHRWNDLADSFLKQYKYNIDMAPD
Sbjct: 181 RKMSTYAHDDKLLIHRFQDSLVGPASRWYMQFDGSQVHRWNDLADSFLKQYKYNIDMAPD 240

Query: 241 HLDLQRMEKRNVETFKEYAQRWRELVAQVQPPLTDKELTAIFINTLRAPYYDRMVGSAST 300
           HLDLQRMEKRNVETFKEYAQRWRELVAQVQPPLTDKELTAIFINTLRAPYYDRMVGSAST
Sbjct: 241 HLDLQRMEKRNVETFKEYAQRWRELVAQVQPPLTDKELTAIFINTLRAPYYDRMVGSAST 300

Query: 301 NFSDVIRIGERIEFGVKNERITDFSSETRRMMTLKKKEEEIHELSST 348
           NFSDVIRIGERIEFGVKNERITDFSSETRRMMTLKKKEEEIHELSST
Sbjct: 301 NFSDVIRIGERIEFGVKNERITDFSSETRRMMTLKKKEEEIHELSST 347

[Close]

BLAST of IVF0011270 vs. ExPASy TrEMBL
Match: A0A5A7VAU5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1023G00060 PE=4 SV=1)

HSP 1 Score: 604.4 bits (1557), Expect = 3.1e-169
Identity = 307/347 (88.47%), Postives = 319/347 (91.93%), Query Frame = 0


Query: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDILAYP 60
           MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSV GTSSQVEVDLNQVLED+  YP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVVGTSSQVEVDLNQVLEDMPTYP 60

Query: 61  PSFTPQRPSSPRMVDRTYPTSFPAPNPNTTTQQAAHVSDLISTPITKSGKKISEEQGSRK 120
           P FTPQR SSPRM DRTYPTSFPAPNPNTTTQQAAH ++ IST I + GKKISEEQGSR+
Sbjct: 61  PGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNPISTLIMEGGKKISEEQGSRR 120

Query: 121 RLEFLEERLCTIEGIDMYESIDATQLCLISDVVIPLKFKIPDFEKYNGTTCPKSHLVMYC 180
           RLEFLEERL  IEG DMY SIDATQLCLISDVVIP KFK PDFEKYNGT+CPKSHLVMYC
Sbjct: 121 RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTSCPKSHLVMYC 180

Query: 181 RKMSTYAHDDKLLIHRFQDSLVGPASRWYMQFDGSQVHRWNDLADSFLKQYKYNIDMAPD 240
           RKMS YAHDDKLLIH FQDSLVGPASRWYMQ DGSQVHRW DLADSFLKQYKYNIDMAPD
Sbjct: 181 RKMSAYAHDDKLLIHCFQDSLVGPASRWYMQLDGSQVHRWKDLADSFLKQYKYNIDMAPD 240

Query: 241 HLDLQRMEKRNVETFKEYAQRWRELVAQVQPPLTDKELTAIFINTLRAPYYDRMVGSAST 300
            LDLQRMEK+NVETFKEYAQRWREL AQVQPPLTDKELTA+FINTLRAPYYDRMVGSAST
Sbjct: 241 RLDLQRMEKKNVETFKEYAQRWRELAAQVQPPLTDKELTAMFINTLRAPYYDRMVGSAST 300

Query: 301 NFSDVIRIGERIEFGVKNERITDFSSETRRMMTLKKKEEEIHELSST 348
           NFSDVI IGERIEFGVKN RI+D +SETRR+MT KKKE E+HELSST
Sbjct: 301 NFSDVITIGERIEFGVKNGRISDPASETRRVMTPKKKEGEVHELSST 347

[Close]

BLAST of IVF0011270 vs. ExPASy TrEMBL
Match: A0A5A7V681 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold455G00760 PE=4 SV=1)

HSP 1 Score: 601.7 bits (1550), Expect = 2.0e-168
Identity = 305/347 (87.90%), Postives = 318/347 (91.64%), Query Frame = 0


Query: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDILAYP 60
           MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLED+ AYP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYP 60

Query: 61  PSFTPQRPSSPRMVDRTYPTSFPAPNPNTTTQQAAHVSDLISTPITKSGKKISEEQGSRK 120
           P FTPQR SSPRM DRTYPTSFP PNPNTTTQQ AH ++ IST I + GKKISEEQGSR+
Sbjct: 61  PGFTPQRSSSPRMGDRTYPTSFPTPNPNTTTQQVAHANNPISTLIMEGGKKISEEQGSRR 120

Query: 121 RLEFLEERLCTIEGIDMYESIDATQLCLISDVVIPLKFKIPDFEKYNGTTCPKSHLVMYC 180
           RLEFLEERL  IEG DMY SIDATQLCLISDVVIP KFK PDFEKYNGT+CPKSHLVMYC
Sbjct: 121 RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTSCPKSHLVMYC 180

Query: 181 RKMSTYAHDDKLLIHRFQDSLVGPASRWYMQFDGSQVHRWNDLADSFLKQYKYNIDMAPD 240
           RKMS YAHDDKLLIH FQD+LVGPASRWYMQ DGSQVHRW DLADSFLKQYKYNIDMAPD
Sbjct: 181 RKMSAYAHDDKLLIHCFQDNLVGPASRWYMQLDGSQVHRWKDLADSFLKQYKYNIDMAPD 240

Query: 241 HLDLQRMEKRNVETFKEYAQRWRELVAQVQPPLTDKELTAIFINTLRAPYYDRMVGSAST 300
            LDLQRMEK+NVETFKEYAQRWREL AQVQPP TDKELTA+FINTLRAPYYDRMVGSAST
Sbjct: 241 RLDLQRMEKKNVETFKEYAQRWRELAAQVQPPRTDKELTAMFINTLRAPYYDRMVGSAST 300

Query: 301 NFSDVIRIGERIEFGVKNERITDFSSETRRMMTLKKKEEEIHELSST 348
           NFSDVI IGERIEFGVKN RI+D +SETRR+MT KKKE E+HELSST
Sbjct: 301 NFSDVITIGERIEFGVKNRRISDPASETRRVMTPKKKEGEVHELSST 347

[Close]

BLAST of IVF0011270 vs. ExPASy TrEMBL
Match: A0A5A7T401 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1593G00270 PE=4 SV=1)

HSP 1 Score: 566.6 bits (1459), Expect = 7.1e-158
Identity = 297/347 (85.59%), Postives = 302/347 (87.03%), Query Frame = 0


Query: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDILAYP 60
           MDEQTNDQVQAVRQDVEGLKDQLAKILEL TTGR KSVAG SSQVEVDLNQVLED+ AYP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELFTTGRRKSVAGISSQVEVDLNQVLEDMPAYP 60

Query: 61  PSFTPQRPSSPRMVDRTYPTSFPAPNPNTTTQQAAHVSDLISTPITKSGKKISEEQGSRK 120
             FTPQR SSPRM   TYPT     NPN  TQQ  HVSD +STPITKSGKKISEEQ SRK
Sbjct: 61  IGFTPQRSSSPRM---TYPTQ----NPNPITQQTDHVSDPMSTPITKSGKKISEEQSSRK 120

Query: 121 RLEFLEERLCTIEGIDMYESIDATQLCLISDVVIPLKFKIPDFEKYNGTTCPKSHLVMYC 180
           RLEFLEERL  IEG DMY SIDATQLCLISDVVIP KFK PDFEKYNGTTCPKSHLVMYC
Sbjct: 121 RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYC 180

Query: 181 RKMSTYAHDDKLLIHRFQDSLVGPASRWYMQFDGSQVHRWNDLADSFLKQYKYNIDMAPD 240
           +KMS YAHDDKLLIH FQDSLVGP SRWYMQ DGSQVHRW DLADSFLKQY YNIDM PD
Sbjct: 181 QKMSAYAHDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYNYNIDMTPD 240

Query: 241 HLDLQRMEKRNVETFKEYAQRWRELVAQVQPPLTDKELTAIFINTLRAPYYDRMVGSAST 300
            LDLQRMEK+NVETFKEYAQRWREL  QVQPPLTDKEL A+FINTLRAPYYDRMVGSAST
Sbjct: 241 RLDLQRMEKKNVETFKEYAQRWRELATQVQPPLTDKELMAMFINTLRAPYYDRMVGSAST 300

Query: 301 NFSDVIRIGERIEFGVKNERITDFSSETRRMMTLKKKEEEIHELSST 348
           NFSDVI IGE IEFGVKN RI D SSE RRMMT KKKEEEIHELSST
Sbjct: 301 NFSDVITIGEMIEFGVKNGRIFDPSSEIRRMMTPKKKEEEIHELSST 340

[Close]

BLAST of IVF0011270 vs. NCBI nr
Match: XP_008452348.1 (PREDICTED: uncharacterized protein LOC103493407 [Cucumis melo] >KAA0060506.1 Gag-pro-like protein [Cucumis melo var. makuwa] >TYK00746.1 Gag-pro-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 686 bits (1770), Expect = 8.51e-249
Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 0


Query: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDILAYP 60
           MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDILAYP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDILAYP 60

Query: 61  PSFTPQRPSSPRMVDRTYPTSFPAPNPNTTTQQAAHVSDLISTPITKSGKKISEEQGSRK 120
           PSFTPQRPSSPRMVDRTYPTSFPAPNPNTTTQQAAHVSDLISTPITKSGKKISEEQGSRK
Sbjct: 61  PSFTPQRPSSPRMVDRTYPTSFPAPNPNTTTQQAAHVSDLISTPITKSGKKISEEQGSRK 120

Query: 121 RLEFLEERLCTIEGIDMYESIDATQLCLISDVVIPLKFKIPDFEKYNGTTCPKSHLVMYC 180
           RLEFLEERLCTIEGIDMYESIDATQLCLISDVVIPLKFKIPDFEKYNGTTCPKSHLVMYC
Sbjct: 121 RLEFLEERLCTIEGIDMYESIDATQLCLISDVVIPLKFKIPDFEKYNGTTCPKSHLVMYC 180

Query: 181 RKMSTYAHDDKLLIHRFQDSLVGPASRWYMQFDGSQVHRWNDLADSFLKQYKYNIDMAPD 240
           RKMSTYAHDDKLLIHRFQDSLVGPASRWYMQFDGSQVHRWNDLADSFLKQYKYNIDMAPD
Sbjct: 181 RKMSTYAHDDKLLIHRFQDSLVGPASRWYMQFDGSQVHRWNDLADSFLKQYKYNIDMAPD 240

Query: 241 HLDLQRMEKRNVETFKEYAQRWRELVAQVQPPLTDKELTAIFINTLRAPYYDRMVGSAST 300
           HLDLQRMEKRNVETFKEYAQRWRELVAQVQPPLTDKELTAIFINTLRAPYYDRMVGSAST
Sbjct: 241 HLDLQRMEKRNVETFKEYAQRWRELVAQVQPPLTDKELTAIFINTLRAPYYDRMVGSAST 300

Query: 301 NFSDVIRIGERIEFGVKNERITDFSSETRRMMTLKKKEEEIHELSST 347
           NFSDVIRIGERIEFGVKNERITDFSSETRRMMTLKKKEEEIHELSST
Sbjct: 301 NFSDVIRIGERIEFGVKNERITDFSSETRRMMTLKKKEEEIHELSST 347

[Close]

BLAST of IVF0011270 vs. NCBI nr
Match: KAA0061241.1 (uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa])

HSP 1 Score: 598 bits (1543), Expect = 4.33e-203
Identity = 305/347 (87.90%), Postives = 318/347 (91.64%), Query Frame = 0


Query: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDILAYP 60
           MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLED+ AYP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYP 60

Query: 61  PSFTPQRPSSPRMVDRTYPTSFPAPNPNTTTQQAAHVSDLISTPITKSGKKISEEQGSRK 120
           P FTPQR SSPRM DRTYPTSFP PNPNTTTQQ AH ++ IST I + GKKISEEQGSR+
Sbjct: 61  PGFTPQRSSSPRMGDRTYPTSFPTPNPNTTTQQVAHANNPISTLIMEGGKKISEEQGSRR 120

Query: 121 RLEFLEERLCTIEGIDMYESIDATQLCLISDVVIPLKFKIPDFEKYNGTTCPKSHLVMYC 180
           RLEFLEERL  IEG DMY SIDATQLCLISDVVIP KFK PDFEKYNGT+CPKSHLVMYC
Sbjct: 121 RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTSCPKSHLVMYC 180

Query: 181 RKMSTYAHDDKLLIHRFQDSLVGPASRWYMQFDGSQVHRWNDLADSFLKQYKYNIDMAPD 240
           RKMS YAHDDKLLIH FQD+LVGPASRWYMQ DGSQVHRW DLADSFLKQYKYNIDMAPD
Sbjct: 181 RKMSAYAHDDKLLIHCFQDNLVGPASRWYMQLDGSQVHRWKDLADSFLKQYKYNIDMAPD 240

Query: 241 HLDLQRMEKRNVETFKEYAQRWRELVAQVQPPLTDKELTAIFINTLRAPYYDRMVGSAST 300
            LDLQRMEK+NVETFKEYAQRWREL AQVQPP TDKELTA+FINTLRAPYYDRMVGSAST
Sbjct: 241 RLDLQRMEKKNVETFKEYAQRWRELAAQVQPPRTDKELTAMFINTLRAPYYDRMVGSAST 300

Query: 301 NFSDVIRIGERIEFGVKNERITDFSSETRRMMTLKKKEEEIHELSST 347
           NFSDVI IGERIEFGVKN RI+D +SETRR+MT KKKE E+HELSST
Sbjct: 301 NFSDVITIGERIEFGVKNRRISDPASETRRVMTPKKKEGEVHELSST 347

[Close]

BLAST of IVF0011270 vs. NCBI nr
Match: KAA0065293.1 (uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa])

HSP 1 Score: 601 bits (1550), Expect = 3.87e-199
Identity = 307/347 (88.47%), Postives = 319/347 (91.93%), Query Frame = 0


Query: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDILAYP 60
           MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSV GTSSQVEVDLNQVLED+  YP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVVGTSSQVEVDLNQVLEDMPTYP 60

Query: 61  PSFTPQRPSSPRMVDRTYPTSFPAPNPNTTTQQAAHVSDLISTPITKSGKKISEEQGSRK 120
           P FTPQR SSPRM DRTYPTSFPAPNPNTTTQQAAH ++ IST I + GKKISEEQGSR+
Sbjct: 61  PGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNPISTLIMEGGKKISEEQGSRR 120

Query: 121 RLEFLEERLCTIEGIDMYESIDATQLCLISDVVIPLKFKIPDFEKYNGTTCPKSHLVMYC 180
           RLEFLEERL  IEG DMY SIDATQLCLISDVVIP KFK PDFEKYNGT+CPKSHLVMYC
Sbjct: 121 RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTSCPKSHLVMYC 180

Query: 181 RKMSTYAHDDKLLIHRFQDSLVGPASRWYMQFDGSQVHRWNDLADSFLKQYKYNIDMAPD 240
           RKMS YAHDDKLLIH FQDSLVGPASRWYMQ DGSQVHRW DLADSFLKQYKYNIDMAPD
Sbjct: 181 RKMSAYAHDDKLLIHCFQDSLVGPASRWYMQLDGSQVHRWKDLADSFLKQYKYNIDMAPD 240

Query: 241 HLDLQRMEKRNVETFKEYAQRWRELVAQVQPPLTDKELTAIFINTLRAPYYDRMVGSAST 300
            LDLQRMEK+NVETFKEYAQRWREL AQVQPPLTDKELTA+FINTLRAPYYDRMVGSAST
Sbjct: 241 RLDLQRMEKKNVETFKEYAQRWRELAAQVQPPLTDKELTAMFINTLRAPYYDRMVGSAST 300

Query: 301 NFSDVIRIGERIEFGVKNERITDFSSETRRMMTLKKKEEEIHELSST 347
           NFSDVI IGERIEFGVKN RI+D +SETRR+MT KKKE E+HELSST
Sbjct: 301 NFSDVITIGERIEFGVKNGRISDPASETRRVMTPKKKEGEVHELSST 347

[Close]

BLAST of IVF0011270 vs. NCBI nr
Match: XP_016903339.1 (PREDICTED: uncharacterized protein LOC103502838 [Cucumis melo])

HSP 1 Score: 563 bits (1451), Expect = 2.70e-196
Identity = 297/347 (85.59%), Postives = 302/347 (87.03%), Query Frame = 0


Query: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDILAYP 60
           MDEQTNDQVQAVRQDVEGLKDQLAKILEL TTGR KSVAG SSQVEVDLNQVLED+ AYP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELFTTGRRKSVAGISSQVEVDLNQVLEDMPAYP 60

Query: 61  PSFTPQRPSSPRMVDRTYPTSFPAPNPNTTTQQAAHVSDLISTPITKSGKKISEEQGSRK 120
             FTPQR SSPRM   TYPT     NPN  TQQ  HVSD +STPITKSGKKISEEQ SRK
Sbjct: 61  IGFTPQRSSSPRM---TYPTQ----NPNPITQQTDHVSDPMSTPITKSGKKISEEQSSRK 120

Query: 121 RLEFLEERLCTIEGIDMYESIDATQLCLISDVVIPLKFKIPDFEKYNGTTCPKSHLVMYC 180
           RLEFLEERL  IEG DMY SIDATQLCLISDVVIP KFK PDFEKYNGTTCPKSHLVMYC
Sbjct: 121 RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYC 180

Query: 181 RKMSTYAHDDKLLIHRFQDSLVGPASRWYMQFDGSQVHRWNDLADSFLKQYKYNIDMAPD 240
           +KMS YAHDDKLLIH FQDSLVGP SRWYMQ DGSQVHRW DLADSFLKQY YNIDM PD
Sbjct: 181 QKMSAYAHDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYNYNIDMTPD 240

Query: 241 HLDLQRMEKRNVETFKEYAQRWRELVAQVQPPLTDKELTAIFINTLRAPYYDRMVGSAST 300
            LDLQRMEK+NVETFKEYAQRWREL  QVQPPLTDKEL A+FINTLRAPYYDRMVGSAST
Sbjct: 241 RLDLQRMEKKNVETFKEYAQRWRELATQVQPPLTDKELMAMFINTLRAPYYDRMVGSAST 300

Query: 301 NFSDVIRIGERIEFGVKNERITDFSSETRRMMTLKKKEEEIHELSST 347
           NFSDVI IGE IEFGVKN RI D SSE RRMMT KKKEEEIHELSST
Sbjct: 301 NFSDVITIGEMIEFGVKNGRIFDPSSEIRRMMTPKKKEEEIHELSST 340

[Close]

BLAST of IVF0011270 vs. NCBI nr
Match: KAA0037703.1 (uncharacterized protein E6C27_scaffold1593G00270 [Cucumis melo var. makuwa])

HSP 1 Score: 563 bits (1451), Expect = 2.69e-195
Identity = 297/347 (85.59%), Postives = 302/347 (87.03%), Query Frame = 0


Query: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDILAYP 60
           MDEQTNDQVQAVRQDVEGLKDQLAKILEL TTGR KSVAG SSQVEVDLNQVLED+ AYP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELFTTGRRKSVAGISSQVEVDLNQVLEDMPAYP 60

Query: 61  PSFTPQRPSSPRMVDRTYPTSFPAPNPNTTTQQAAHVSDLISTPITKSGKKISEEQGSRK 120
             FTPQR SSPRM   TYPT     NPN  TQQ  HVSD +STPITKSGKKISEEQ SRK
Sbjct: 61  IGFTPQRSSSPRM---TYPTQ----NPNPITQQTDHVSDPMSTPITKSGKKISEEQSSRK 120

Query: 121 RLEFLEERLCTIEGIDMYESIDATQLCLISDVVIPLKFKIPDFEKYNGTTCPKSHLVMYC 180
           RLEFLEERL  IEG DMY SIDATQLCLISDVVIP KFK PDFEKYNGTTCPKSHLVMYC
Sbjct: 121 RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYC 180

Query: 181 RKMSTYAHDDKLLIHRFQDSLVGPASRWYMQFDGSQVHRWNDLADSFLKQYKYNIDMAPD 240
           +KMS YAHDDKLLIH FQDSLVGP SRWYMQ DGSQVHRW DLADSFLKQY YNIDM PD
Sbjct: 181 QKMSAYAHDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYNYNIDMTPD 240

Query: 241 HLDLQRMEKRNVETFKEYAQRWRELVAQVQPPLTDKELTAIFINTLRAPYYDRMVGSAST 300
            LDLQRMEK+NVETFKEYAQRWREL  QVQPPLTDKEL A+FINTLRAPYYDRMVGSAST
Sbjct: 241 RLDLQRMEKKNVETFKEYAQRWRELATQVQPPLTDKELMAMFINTLRAPYYDRMVGSAST 300

Query: 301 NFSDVIRIGERIEFGVKNERITDFSSETRRMMTLKKKEEEIHELSST 347
           NFSDVI IGE IEFGVKN RI D SSE RRMMT KKKEEEIHELSST
Sbjct: 301 NFSDVITIGEMIEFGVKNGRIFDPSSEIRRMMTPKKKEEEIHELSST 340

The following BLAST results are available for this feature:

BLAST of IVF0011270 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0011270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V1Y8	9.4e-195	100.00	Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold420...	[more]
A0A1S3BTL0	9.4e-195	100.00	uncharacterized protein LOC103493407 OS=Cucumis melo OX=3656 GN=LOC103493407 PE=...	[more]
A0A5A7VAU5	3.1e-169	88.47	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7V681	2.0e-168	87.90	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7T401	7.1e-158	85.59	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of IVF0011270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008452348.1	8.51e-249	100.00	PREDICTED: uncharacterized protein LOC103493407 [Cucumis melo] >KAA0060506.1 Gag...	[more]
KAA0061241.1	4.33e-203	87.90	uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa]	[more]
KAA0065293.1	3.87e-199	88.47	uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa]	[more]
XP_016903339.1	2.70e-196	85.59	PREDICTED: uncharacterized protein LOC103502838 [Cucumis melo]	[more]
KAA0037703.1	2.69e-195	85.59	uncharacterized protein E6C27_scaffold1593G00270 [Cucumis melo var. makuwa]	[more]

BLAST of IVF0011270 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 2..29
None	No IPR available	PANTHER	PTHR34491:SF19	GAG-PRO-LIKE PROTEIN	coord: 101..328
None	No IPR available	PANTHER	PTHR34491	A-TYPE INCLUSION PROTEIN, PUTATIVE-RELATED	coord: 101..328
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 200..287 e-value: 2.6E-10 score: 40.4

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0011270.1	IVF0011270.1	mRNA