Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGAGCAAACCAATGATCAGGTTCAAGCAGTTCGTCAAGACGTTGAAGGATTGAAAGATCAATTGGCAAAGATCTTGGAACTGCTCACTACTGGAAGAGGAAAGAGTGTTGCAGGGACTTCATCACAAGTGGAAGTAGATCTAAACCAGGTACTAGAGGACATTCTTGCATACCCTCCAAGTTTTACTCCTCAAAGGCCGTCTAGTCCACGCATGGTGGATAGGACATATCCTACATCTTTTCCAGCACCAAATCCTAACACAACCACCCAACAGGCAGCCCATGTGAGTGATCTCATATCTACTCCAATTACGAAAAGTGGTAAGAAAATTTCAGAAGAGCAGGGTAGTAGAAAAAGATTAGAATTTCTAGAAGAAAGATTGTGCACCATTGAAGGTATAGACATGTACGAAAGTATCGACGCAACACAACTATGTTTAATATCAGATGTGGTGATCCCTCTCAAATTCAAGATTCCAGATTTTGAGAAGTACAATGGAACCACGTGCCCAAAAAGTCATCTAGTTATGTATTGTCGGAAAATGTCAACTTACGCTCATGATGATAAATTGTTGATTCATCGCTTCCAAGACAGCTTAGTTGGTCCAGCTTCTCGTTGGTACATGCAGTTTGATGGCTCACAAGTGCATAGGTGGAATGATCTCGCCGATTCATTTTTAAAACAATATAAGTACAATATTGATATGGCACCTGACCATTTGGATCTTCAAAGGATGGAAAAAAGGAATGTTGAAACTTTTAAGGAATATGCACAACGATGGAGAGAGTTAGTTGCACAAGTGCAACCTCCCCTAACCGACAAAGAATTGACAGCCATTTTCATAAACACTCTTCGGGCCCCATACTATGATAGAATGGTTGGAAGTGCTTCGACTAATTTCTCAGACGTCATAAGAATTGGGGAGAGGATTGAATTTGGAGTGAAGAATGAAAGGATCACCGATTTTTCTTCAGAGACAAGAAGGATGATGACCCTAAAGAAGAAAGAGGAAGAAATACATGAGTTGAGCTCGACTTAA
mRNA sequence
ATGGATGAGCAAACCAATGATCAGGTTCAAGCAGTTCGTCAAGACGTTGAAGGATTGAAAGATCAATTGGCAAAGATCTTGGAACTGCTCACTACTGGAAGAGGAAAGAGTGTTGCAGGGACTTCATCACAAGTGGAAGTAGATCTAAACCAGGTACTAGAGGACATTCTTGCATACCCTCCAAGTTTTACTCCTCAAAGGCCGTCTAGTCCACGCATGGTGGATAGGACATATCCTACATCTTTTCCAGCACCAAATCCTAACACAACCACCCAACAGGCAGCCCATGTGAGTGATCTCATATCTACTCCAATTACGAAAAGTGGTAAGAAAATTTCAGAAGAGCAGGGTAGTAGAAAAAGATTAGAATTTCTAGAAGAAAGATTGTGCACCATTGAAGGTATAGACATGTACGAAAGTATCGACGCAACACAACTATGTTTAATATCAGATGTGGTGATCCCTCTCAAATTCAAGATTCCAGATTTTGAGAAGTACAATGGAACCACGTGCCCAAAAAGTCATCTAGTTATGTATTGTCGGAAAATGTCAACTTACGCTCATGATGATAAATTGTTGATTCATCGCTTCCAAGACAGCTTAGTTGGTCCAGCTTCTCGTTGGTACATGCAGTTTGATGGCTCACAAGTGCATAGGTGGAATGATCTCGCCGATTCATTTTTAAAACAATATAAGTACAATATTGATATGGCACCTGACCATTTGGATCTTCAAAGGATGGAAAAAAGGAATGTTGAAACTTTTAAGGAATATGCACAACGATGGAGAGAGTTAGTTGCACAAGTGCAACCTCCCCTAACCGACAAAGAATTGACAGCCATTTTCATAAACACTCTTCGGGCCCCATACTATGATAGAATGGTTGGAAGTGCTTCGACTAATTTCTCAGACGTCATAAGAATTGGGGAGAGGATTGAATTTGGAGTGAAGAATGAAAGGATCACCGATTTTTCTTCAGAGACAAGAAGGATGATGACCCTAAAGAAGAAAGAGGAAGAAATACATGAGTTGAGCTCGACTTAA
Coding sequence (CDS)
ATGGATGAGCAAACCAATGATCAGGTTCAAGCAGTTCGTCAAGACGTTGAAGGATTGAAAGATCAATTGGCAAAGATCTTGGAACTGCTCACTACTGGAAGAGGAAAGAGTGTTGCAGGGACTTCATCACAAGTGGAAGTAGATCTAAACCAGGTACTAGAGGACATTCTTGCATACCCTCCAAGTTTTACTCCTCAAAGGCCGTCTAGTCCACGCATGGTGGATAGGACATATCCTACATCTTTTCCAGCACCAAATCCTAACACAACCACCCAACAGGCAGCCCATGTGAGTGATCTCATATCTACTCCAATTACGAAAAGTGGTAAGAAAATTTCAGAAGAGCAGGGTAGTAGAAAAAGATTAGAATTTCTAGAAGAAAGATTGTGCACCATTGAAGGTATAGACATGTACGAAAGTATCGACGCAACACAACTATGTTTAATATCAGATGTGGTGATCCCTCTCAAATTCAAGATTCCAGATTTTGAGAAGTACAATGGAACCACGTGCCCAAAAAGTCATCTAGTTATGTATTGTCGGAAAATGTCAACTTACGCTCATGATGATAAATTGTTGATTCATCGCTTCCAAGACAGCTTAGTTGGTCCAGCTTCTCGTTGGTACATGCAGTTTGATGGCTCACAAGTGCATAGGTGGAATGATCTCGCCGATTCATTTTTAAAACAATATAAGTACAATATTGATATGGCACCTGACCATTTGGATCTTCAAAGGATGGAAAAAAGGAATGTTGAAACTTTTAAGGAATATGCACAACGATGGAGAGAGTTAGTTGCACAAGTGCAACCTCCCCTAACCGACAAAGAATTGACAGCCATTTTCATAAACACTCTTCGGGCCCCATACTATGATAGAATGGTTGGAAGTGCTTCGACTAATTTCTCAGACGTCATAAGAATTGGGGAGAGGATTGAATTTGGAGTGAAGAATGAAAGGATCACCGATTTTTCTTCAGAGACAAGAAGGATGATGACCCTAAAGAAGAAAGAGGAAGAAATACATGAGTTGAGCTCGACTTAA
Protein sequence
MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDILAYPPSFTPQRPSSPRMVDRTYPTSFPAPNPNTTTQQAAHVSDLISTPITKSGKKISEEQGSRKRLEFLEERLCTIEGIDMYESIDATQLCLISDVVIPLKFKIPDFEKYNGTTCPKSHLVMYCRKMSTYAHDDKLLIHRFQDSLVGPASRWYMQFDGSQVHRWNDLADSFLKQYKYNIDMAPDHLDLQRMEKRNVETFKEYAQRWRELVAQVQPPLTDKELTAIFINTLRAPYYDRMVGSASTNFSDVIRIGERIEFGVKNERITDFSSETRRMMTLKKKEEEIHELSST
Homology
BLAST of IVF0011270 vs. ExPASy TrEMBL
Match:
A0A5A7V1Y8 (Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold420G00010 PE=4 SV=1)
HSP 1 Score: 689.1 bits (1777), Expect = 9.4e-195
Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 0
Query: 1 MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDILAYP 60
MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDILAYP
Sbjct: 1 MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDILAYP 60
Query: 61 PSFTPQRPSSPRMVDRTYPTSFPAPNPNTTTQQAAHVSDLISTPITKSGKKISEEQGSRK 120
PSFTPQRPSSPRMVDRTYPTSFPAPNPNTTTQQAAHVSDLISTPITKSGKKISEEQGSRK
Sbjct: 61 PSFTPQRPSSPRMVDRTYPTSFPAPNPNTTTQQAAHVSDLISTPITKSGKKISEEQGSRK 120
Query: 121 RLEFLEERLCTIEGIDMYESIDATQLCLISDVVIPLKFKIPDFEKYNGTTCPKSHLVMYC 180
RLEFLEERLCTIEGIDMYESIDATQLCLISDVVIPLKFKIPDFEKYNGTTCPKSHLVMYC
Sbjct: 121 RLEFLEERLCTIEGIDMYESIDATQLCLISDVVIPLKFKIPDFEKYNGTTCPKSHLVMYC 180
Query: 181 RKMSTYAHDDKLLIHRFQDSLVGPASRWYMQFDGSQVHRWNDLADSFLKQYKYNIDMAPD 240
RKMSTYAHDDKLLIHRFQDSLVGPASRWYMQFDGSQVHRWNDLADSFLKQYKYNIDMAPD
Sbjct: 181 RKMSTYAHDDKLLIHRFQDSLVGPASRWYMQFDGSQVHRWNDLADSFLKQYKYNIDMAPD 240
Query: 241 HLDLQRMEKRNVETFKEYAQRWRELVAQVQPPLTDKELTAIFINTLRAPYYDRMVGSAST 300
HLDLQRMEKRNVETFKEYAQRWRELVAQVQPPLTDKELTAIFINTLRAPYYDRMVGSAST
Sbjct: 241 HLDLQRMEKRNVETFKEYAQRWRELVAQVQPPLTDKELTAIFINTLRAPYYDRMVGSAST 300
Query: 301 NFSDVIRIGERIEFGVKNERITDFSSETRRMMTLKKKEEEIHELSST 348
NFSDVIRIGERIEFGVKNERITDFSSETRRMMTLKKKEEEIHELSST
Sbjct: 301 NFSDVIRIGERIEFGVKNERITDFSSETRRMMTLKKKEEEIHELSST 347
BLAST of IVF0011270 vs. ExPASy TrEMBL
Match:
A0A1S3BTL0 (uncharacterized protein LOC103493407 OS=Cucumis melo OX=3656 GN=LOC103493407 PE=4 SV=1)
HSP 1 Score: 689.1 bits (1777), Expect = 9.4e-195
Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 0
Query: 1 MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDILAYP 60
MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDILAYP
Sbjct: 1 MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDILAYP 60
Query: 61 PSFTPQRPSSPRMVDRTYPTSFPAPNPNTTTQQAAHVSDLISTPITKSGKKISEEQGSRK 120
PSFTPQRPSSPRMVDRTYPTSFPAPNPNTTTQQAAHVSDLISTPITKSGKKISEEQGSRK
Sbjct: 61 PSFTPQRPSSPRMVDRTYPTSFPAPNPNTTTQQAAHVSDLISTPITKSGKKISEEQGSRK 120
Query: 121 RLEFLEERLCTIEGIDMYESIDATQLCLISDVVIPLKFKIPDFEKYNGTTCPKSHLVMYC 180
RLEFLEERLCTIEGIDMYESIDATQLCLISDVVIPLKFKIPDFEKYNGTTCPKSHLVMYC
Sbjct: 121 RLEFLEERLCTIEGIDMYESIDATQLCLISDVVIPLKFKIPDFEKYNGTTCPKSHLVMYC 180
Query: 181 RKMSTYAHDDKLLIHRFQDSLVGPASRWYMQFDGSQVHRWNDLADSFLKQYKYNIDMAPD 240
RKMSTYAHDDKLLIHRFQDSLVGPASRWYMQFDGSQVHRWNDLADSFLKQYKYNIDMAPD
Sbjct: 181 RKMSTYAHDDKLLIHRFQDSLVGPASRWYMQFDGSQVHRWNDLADSFLKQYKYNIDMAPD 240
Query: 241 HLDLQRMEKRNVETFKEYAQRWRELVAQVQPPLTDKELTAIFINTLRAPYYDRMVGSAST 300
HLDLQRMEKRNVETFKEYAQRWRELVAQVQPPLTDKELTAIFINTLRAPYYDRMVGSAST
Sbjct: 241 HLDLQRMEKRNVETFKEYAQRWRELVAQVQPPLTDKELTAIFINTLRAPYYDRMVGSAST 300
Query: 301 NFSDVIRIGERIEFGVKNERITDFSSETRRMMTLKKKEEEIHELSST 348
NFSDVIRIGERIEFGVKNERITDFSSETRRMMTLKKKEEEIHELSST
Sbjct: 301 NFSDVIRIGERIEFGVKNERITDFSSETRRMMTLKKKEEEIHELSST 347
BLAST of IVF0011270 vs. ExPASy TrEMBL
Match:
A0A5A7VAU5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1023G00060 PE=4 SV=1)
HSP 1 Score: 604.4 bits (1557), Expect = 3.1e-169
Identity = 307/347 (88.47%), Postives = 319/347 (91.93%), Query Frame = 0
Query: 1 MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDILAYP 60
MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSV GTSSQVEVDLNQVLED+ YP
Sbjct: 1 MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVVGTSSQVEVDLNQVLEDMPTYP 60
Query: 61 PSFTPQRPSSPRMVDRTYPTSFPAPNPNTTTQQAAHVSDLISTPITKSGKKISEEQGSRK 120
P FTPQR SSPRM DRTYPTSFPAPNPNTTTQQAAH ++ IST I + GKKISEEQGSR+
Sbjct: 61 PGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNPISTLIMEGGKKISEEQGSRR 120
Query: 121 RLEFLEERLCTIEGIDMYESIDATQLCLISDVVIPLKFKIPDFEKYNGTTCPKSHLVMYC 180
RLEFLEERL IEG DMY SIDATQLCLISDVVIP KFK PDFEKYNGT+CPKSHLVMYC
Sbjct: 121 RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTSCPKSHLVMYC 180
Query: 181 RKMSTYAHDDKLLIHRFQDSLVGPASRWYMQFDGSQVHRWNDLADSFLKQYKYNIDMAPD 240
RKMS YAHDDKLLIH FQDSLVGPASRWYMQ DGSQVHRW DLADSFLKQYKYNIDMAPD
Sbjct: 181 RKMSAYAHDDKLLIHCFQDSLVGPASRWYMQLDGSQVHRWKDLADSFLKQYKYNIDMAPD 240
Query: 241 HLDLQRMEKRNVETFKEYAQRWRELVAQVQPPLTDKELTAIFINTLRAPYYDRMVGSAST 300
LDLQRMEK+NVETFKEYAQRWREL AQVQPPLTDKELTA+FINTLRAPYYDRMVGSAST
Sbjct: 241 RLDLQRMEKKNVETFKEYAQRWRELAAQVQPPLTDKELTAMFINTLRAPYYDRMVGSAST 300
Query: 301 NFSDVIRIGERIEFGVKNERITDFSSETRRMMTLKKKEEEIHELSST 348
NFSDVI IGERIEFGVKN RI+D +SETRR+MT KKKE E+HELSST
Sbjct: 301 NFSDVITIGERIEFGVKNGRISDPASETRRVMTPKKKEGEVHELSST 347
BLAST of IVF0011270 vs. ExPASy TrEMBL
Match:
A0A5A7V681 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold455G00760 PE=4 SV=1)
HSP 1 Score: 601.7 bits (1550), Expect = 2.0e-168
Identity = 305/347 (87.90%), Postives = 318/347 (91.64%), Query Frame = 0
Query: 1 MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDILAYP 60
MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLED+ AYP
Sbjct: 1 MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYP 60
Query: 61 PSFTPQRPSSPRMVDRTYPTSFPAPNPNTTTQQAAHVSDLISTPITKSGKKISEEQGSRK 120
P FTPQR SSPRM DRTYPTSFP PNPNTTTQQ AH ++ IST I + GKKISEEQGSR+
Sbjct: 61 PGFTPQRSSSPRMGDRTYPTSFPTPNPNTTTQQVAHANNPISTLIMEGGKKISEEQGSRR 120
Query: 121 RLEFLEERLCTIEGIDMYESIDATQLCLISDVVIPLKFKIPDFEKYNGTTCPKSHLVMYC 180
RLEFLEERL IEG DMY SIDATQLCLISDVVIP KFK PDFEKYNGT+CPKSHLVMYC
Sbjct: 121 RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTSCPKSHLVMYC 180
Query: 181 RKMSTYAHDDKLLIHRFQDSLVGPASRWYMQFDGSQVHRWNDLADSFLKQYKYNIDMAPD 240
RKMS YAHDDKLLIH FQD+LVGPASRWYMQ DGSQVHRW DLADSFLKQYKYNIDMAPD
Sbjct: 181 RKMSAYAHDDKLLIHCFQDNLVGPASRWYMQLDGSQVHRWKDLADSFLKQYKYNIDMAPD 240
Query: 241 HLDLQRMEKRNVETFKEYAQRWRELVAQVQPPLTDKELTAIFINTLRAPYYDRMVGSAST 300
LDLQRMEK+NVETFKEYAQRWREL AQVQPP TDKELTA+FINTLRAPYYDRMVGSAST
Sbjct: 241 RLDLQRMEKKNVETFKEYAQRWRELAAQVQPPRTDKELTAMFINTLRAPYYDRMVGSAST 300
Query: 301 NFSDVIRIGERIEFGVKNERITDFSSETRRMMTLKKKEEEIHELSST 348
NFSDVI IGERIEFGVKN RI+D +SETRR+MT KKKE E+HELSST
Sbjct: 301 NFSDVITIGERIEFGVKNRRISDPASETRRVMTPKKKEGEVHELSST 347
BLAST of IVF0011270 vs. ExPASy TrEMBL
Match:
A0A5A7T401 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1593G00270 PE=4 SV=1)
HSP 1 Score: 566.6 bits (1459), Expect = 7.1e-158
Identity = 297/347 (85.59%), Postives = 302/347 (87.03%), Query Frame = 0
Query: 1 MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDILAYP 60
MDEQTNDQVQAVRQDVEGLKDQLAKILEL TTGR KSVAG SSQVEVDLNQVLED+ AYP
Sbjct: 1 MDEQTNDQVQAVRQDVEGLKDQLAKILELFTTGRRKSVAGISSQVEVDLNQVLEDMPAYP 60
Query: 61 PSFTPQRPSSPRMVDRTYPTSFPAPNPNTTTQQAAHVSDLISTPITKSGKKISEEQGSRK 120
FTPQR SSPRM TYPT NPN TQQ HVSD +STPITKSGKKISEEQ SRK
Sbjct: 61 IGFTPQRSSSPRM---TYPTQ----NPNPITQQTDHVSDPMSTPITKSGKKISEEQSSRK 120
Query: 121 RLEFLEERLCTIEGIDMYESIDATQLCLISDVVIPLKFKIPDFEKYNGTTCPKSHLVMYC 180
RLEFLEERL IEG DMY SIDATQLCLISDVVIP KFK PDFEKYNGTTCPKSHLVMYC
Sbjct: 121 RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYC 180
Query: 181 RKMSTYAHDDKLLIHRFQDSLVGPASRWYMQFDGSQVHRWNDLADSFLKQYKYNIDMAPD 240
+KMS YAHDDKLLIH FQDSLVGP SRWYMQ DGSQVHRW DLADSFLKQY YNIDM PD
Sbjct: 181 QKMSAYAHDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYNYNIDMTPD 240
Query: 241 HLDLQRMEKRNVETFKEYAQRWRELVAQVQPPLTDKELTAIFINTLRAPYYDRMVGSAST 300
LDLQRMEK+NVETFKEYAQRWREL QVQPPLTDKEL A+FINTLRAPYYDRMVGSAST
Sbjct: 241 RLDLQRMEKKNVETFKEYAQRWRELATQVQPPLTDKELMAMFINTLRAPYYDRMVGSAST 300
Query: 301 NFSDVIRIGERIEFGVKNERITDFSSETRRMMTLKKKEEEIHELSST 348
NFSDVI IGE IEFGVKN RI D SSE RRMMT KKKEEEIHELSST
Sbjct: 301 NFSDVITIGEMIEFGVKNGRIFDPSSEIRRMMTPKKKEEEIHELSST 340
BLAST of IVF0011270 vs. NCBI nr
Match:
XP_008452348.1 (PREDICTED: uncharacterized protein LOC103493407 [Cucumis melo] >KAA0060506.1 Gag-pro-like protein [Cucumis melo var. makuwa] >TYK00746.1 Gag-pro-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 686 bits (1770), Expect = 8.51e-249
Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 0
Query: 1 MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDILAYP 60
MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDILAYP
Sbjct: 1 MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDILAYP 60
Query: 61 PSFTPQRPSSPRMVDRTYPTSFPAPNPNTTTQQAAHVSDLISTPITKSGKKISEEQGSRK 120
PSFTPQRPSSPRMVDRTYPTSFPAPNPNTTTQQAAHVSDLISTPITKSGKKISEEQGSRK
Sbjct: 61 PSFTPQRPSSPRMVDRTYPTSFPAPNPNTTTQQAAHVSDLISTPITKSGKKISEEQGSRK 120
Query: 121 RLEFLEERLCTIEGIDMYESIDATQLCLISDVVIPLKFKIPDFEKYNGTTCPKSHLVMYC 180
RLEFLEERLCTIEGIDMYESIDATQLCLISDVVIPLKFKIPDFEKYNGTTCPKSHLVMYC
Sbjct: 121 RLEFLEERLCTIEGIDMYESIDATQLCLISDVVIPLKFKIPDFEKYNGTTCPKSHLVMYC 180
Query: 181 RKMSTYAHDDKLLIHRFQDSLVGPASRWYMQFDGSQVHRWNDLADSFLKQYKYNIDMAPD 240
RKMSTYAHDDKLLIHRFQDSLVGPASRWYMQFDGSQVHRWNDLADSFLKQYKYNIDMAPD
Sbjct: 181 RKMSTYAHDDKLLIHRFQDSLVGPASRWYMQFDGSQVHRWNDLADSFLKQYKYNIDMAPD 240
Query: 241 HLDLQRMEKRNVETFKEYAQRWRELVAQVQPPLTDKELTAIFINTLRAPYYDRMVGSAST 300
HLDLQRMEKRNVETFKEYAQRWRELVAQVQPPLTDKELTAIFINTLRAPYYDRMVGSAST
Sbjct: 241 HLDLQRMEKRNVETFKEYAQRWRELVAQVQPPLTDKELTAIFINTLRAPYYDRMVGSAST 300
Query: 301 NFSDVIRIGERIEFGVKNERITDFSSETRRMMTLKKKEEEIHELSST 347
NFSDVIRIGERIEFGVKNERITDFSSETRRMMTLKKKEEEIHELSST
Sbjct: 301 NFSDVIRIGERIEFGVKNERITDFSSETRRMMTLKKKEEEIHELSST 347
BLAST of IVF0011270 vs. NCBI nr
Match:
KAA0061241.1 (uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa])
HSP 1 Score: 598 bits (1543), Expect = 4.33e-203
Identity = 305/347 (87.90%), Postives = 318/347 (91.64%), Query Frame = 0
Query: 1 MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDILAYP 60
MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLED+ AYP
Sbjct: 1 MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYP 60
Query: 61 PSFTPQRPSSPRMVDRTYPTSFPAPNPNTTTQQAAHVSDLISTPITKSGKKISEEQGSRK 120
P FTPQR SSPRM DRTYPTSFP PNPNTTTQQ AH ++ IST I + GKKISEEQGSR+
Sbjct: 61 PGFTPQRSSSPRMGDRTYPTSFPTPNPNTTTQQVAHANNPISTLIMEGGKKISEEQGSRR 120
Query: 121 RLEFLEERLCTIEGIDMYESIDATQLCLISDVVIPLKFKIPDFEKYNGTTCPKSHLVMYC 180
RLEFLEERL IEG DMY SIDATQLCLISDVVIP KFK PDFEKYNGT+CPKSHLVMYC
Sbjct: 121 RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTSCPKSHLVMYC 180
Query: 181 RKMSTYAHDDKLLIHRFQDSLVGPASRWYMQFDGSQVHRWNDLADSFLKQYKYNIDMAPD 240
RKMS YAHDDKLLIH FQD+LVGPASRWYMQ DGSQVHRW DLADSFLKQYKYNIDMAPD
Sbjct: 181 RKMSAYAHDDKLLIHCFQDNLVGPASRWYMQLDGSQVHRWKDLADSFLKQYKYNIDMAPD 240
Query: 241 HLDLQRMEKRNVETFKEYAQRWRELVAQVQPPLTDKELTAIFINTLRAPYYDRMVGSAST 300
LDLQRMEK+NVETFKEYAQRWREL AQVQPP TDKELTA+FINTLRAPYYDRMVGSAST
Sbjct: 241 RLDLQRMEKKNVETFKEYAQRWRELAAQVQPPRTDKELTAMFINTLRAPYYDRMVGSAST 300
Query: 301 NFSDVIRIGERIEFGVKNERITDFSSETRRMMTLKKKEEEIHELSST 347
NFSDVI IGERIEFGVKN RI+D +SETRR+MT KKKE E+HELSST
Sbjct: 301 NFSDVITIGERIEFGVKNRRISDPASETRRVMTPKKKEGEVHELSST 347
BLAST of IVF0011270 vs. NCBI nr
Match:
KAA0065293.1 (uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa])
HSP 1 Score: 601 bits (1550), Expect = 3.87e-199
Identity = 307/347 (88.47%), Postives = 319/347 (91.93%), Query Frame = 0
Query: 1 MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDILAYP 60
MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSV GTSSQVEVDLNQVLED+ YP
Sbjct: 1 MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVVGTSSQVEVDLNQVLEDMPTYP 60
Query: 61 PSFTPQRPSSPRMVDRTYPTSFPAPNPNTTTQQAAHVSDLISTPITKSGKKISEEQGSRK 120
P FTPQR SSPRM DRTYPTSFPAPNPNTTTQQAAH ++ IST I + GKKISEEQGSR+
Sbjct: 61 PGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNPISTLIMEGGKKISEEQGSRR 120
Query: 121 RLEFLEERLCTIEGIDMYESIDATQLCLISDVVIPLKFKIPDFEKYNGTTCPKSHLVMYC 180
RLEFLEERL IEG DMY SIDATQLCLISDVVIP KFK PDFEKYNGT+CPKSHLVMYC
Sbjct: 121 RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTSCPKSHLVMYC 180
Query: 181 RKMSTYAHDDKLLIHRFQDSLVGPASRWYMQFDGSQVHRWNDLADSFLKQYKYNIDMAPD 240
RKMS YAHDDKLLIH FQDSLVGPASRWYMQ DGSQVHRW DLADSFLKQYKYNIDMAPD
Sbjct: 181 RKMSAYAHDDKLLIHCFQDSLVGPASRWYMQLDGSQVHRWKDLADSFLKQYKYNIDMAPD 240
Query: 241 HLDLQRMEKRNVETFKEYAQRWRELVAQVQPPLTDKELTAIFINTLRAPYYDRMVGSAST 300
LDLQRMEK+NVETFKEYAQRWREL AQVQPPLTDKELTA+FINTLRAPYYDRMVGSAST
Sbjct: 241 RLDLQRMEKKNVETFKEYAQRWRELAAQVQPPLTDKELTAMFINTLRAPYYDRMVGSAST 300
Query: 301 NFSDVIRIGERIEFGVKNERITDFSSETRRMMTLKKKEEEIHELSST 347
NFSDVI IGERIEFGVKN RI+D +SETRR+MT KKKE E+HELSST
Sbjct: 301 NFSDVITIGERIEFGVKNGRISDPASETRRVMTPKKKEGEVHELSST 347
BLAST of IVF0011270 vs. NCBI nr
Match:
XP_016903339.1 (PREDICTED: uncharacterized protein LOC103502838 [Cucumis melo])
HSP 1 Score: 563 bits (1451), Expect = 2.70e-196
Identity = 297/347 (85.59%), Postives = 302/347 (87.03%), Query Frame = 0
Query: 1 MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDILAYP 60
MDEQTNDQVQAVRQDVEGLKDQLAKILEL TTGR KSVAG SSQVEVDLNQVLED+ AYP
Sbjct: 1 MDEQTNDQVQAVRQDVEGLKDQLAKILELFTTGRRKSVAGISSQVEVDLNQVLEDMPAYP 60
Query: 61 PSFTPQRPSSPRMVDRTYPTSFPAPNPNTTTQQAAHVSDLISTPITKSGKKISEEQGSRK 120
FTPQR SSPRM TYPT NPN TQQ HVSD +STPITKSGKKISEEQ SRK
Sbjct: 61 IGFTPQRSSSPRM---TYPTQ----NPNPITQQTDHVSDPMSTPITKSGKKISEEQSSRK 120
Query: 121 RLEFLEERLCTIEGIDMYESIDATQLCLISDVVIPLKFKIPDFEKYNGTTCPKSHLVMYC 180
RLEFLEERL IEG DMY SIDATQLCLISDVVIP KFK PDFEKYNGTTCPKSHLVMYC
Sbjct: 121 RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYC 180
Query: 181 RKMSTYAHDDKLLIHRFQDSLVGPASRWYMQFDGSQVHRWNDLADSFLKQYKYNIDMAPD 240
+KMS YAHDDKLLIH FQDSLVGP SRWYMQ DGSQVHRW DLADSFLKQY YNIDM PD
Sbjct: 181 QKMSAYAHDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYNYNIDMTPD 240
Query: 241 HLDLQRMEKRNVETFKEYAQRWRELVAQVQPPLTDKELTAIFINTLRAPYYDRMVGSAST 300
LDLQRMEK+NVETFKEYAQRWREL QVQPPLTDKEL A+FINTLRAPYYDRMVGSAST
Sbjct: 241 RLDLQRMEKKNVETFKEYAQRWRELATQVQPPLTDKELMAMFINTLRAPYYDRMVGSAST 300
Query: 301 NFSDVIRIGERIEFGVKNERITDFSSETRRMMTLKKKEEEIHELSST 347
NFSDVI IGE IEFGVKN RI D SSE RRMMT KKKEEEIHELSST
Sbjct: 301 NFSDVITIGEMIEFGVKNGRIFDPSSEIRRMMTPKKKEEEIHELSST 340
BLAST of IVF0011270 vs. NCBI nr
Match:
KAA0037703.1 (uncharacterized protein E6C27_scaffold1593G00270 [Cucumis melo var. makuwa])
HSP 1 Score: 563 bits (1451), Expect = 2.69e-195
Identity = 297/347 (85.59%), Postives = 302/347 (87.03%), Query Frame = 0
Query: 1 MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDILAYP 60
MDEQTNDQVQAVRQDVEGLKDQLAKILEL TTGR KSVAG SSQVEVDLNQVLED+ AYP
Sbjct: 1 MDEQTNDQVQAVRQDVEGLKDQLAKILELFTTGRRKSVAGISSQVEVDLNQVLEDMPAYP 60
Query: 61 PSFTPQRPSSPRMVDRTYPTSFPAPNPNTTTQQAAHVSDLISTPITKSGKKISEEQGSRK 120
FTPQR SSPRM TYPT NPN TQQ HVSD +STPITKSGKKISEEQ SRK
Sbjct: 61 IGFTPQRSSSPRM---TYPTQ----NPNPITQQTDHVSDPMSTPITKSGKKISEEQSSRK 120
Query: 121 RLEFLEERLCTIEGIDMYESIDATQLCLISDVVIPLKFKIPDFEKYNGTTCPKSHLVMYC 180
RLEFLEERL IEG DMY SIDATQLCLISDVVIP KFK PDFEKYNGTTCPKSHLVMYC
Sbjct: 121 RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYC 180
Query: 181 RKMSTYAHDDKLLIHRFQDSLVGPASRWYMQFDGSQVHRWNDLADSFLKQYKYNIDMAPD 240
+KMS YAHDDKLLIH FQDSLVGP SRWYMQ DGSQVHRW DLADSFLKQY YNIDM PD
Sbjct: 181 QKMSAYAHDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYNYNIDMTPD 240
Query: 241 HLDLQRMEKRNVETFKEYAQRWRELVAQVQPPLTDKELTAIFINTLRAPYYDRMVGSAST 300
LDLQRMEK+NVETFKEYAQRWREL QVQPPLTDKEL A+FINTLRAPYYDRMVGSAST
Sbjct: 241 RLDLQRMEKKNVETFKEYAQRWRELATQVQPPLTDKELMAMFINTLRAPYYDRMVGSAST 300
Query: 301 NFSDVIRIGERIEFGVKNERITDFSSETRRMMTLKKKEEEIHELSST 347
NFSDVI IGE IEFGVKN RI D SSE RRMMT KKKEEEIHELSST
Sbjct: 301 NFSDVITIGEMIEFGVKNGRIFDPSSEIRRMMTPKKKEEEIHELSST 340
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7V1Y8 | 9.4e-195 | 100.00 | Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold420... | [more] |
| A0A1S3BTL0 | 9.4e-195 | 100.00 | uncharacterized protein LOC103493407 OS=Cucumis melo OX=3656 GN=LOC103493407 PE=... | [more] |
| A0A5A7VAU5 | 3.1e-169 | 88.47 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A5A7V681 | 2.0e-168 | 87.90 | Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |
| A0A5A7T401 | 7.1e-158 | 85.59 | Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_008452348.1 | 8.51e-249 | 100.00 | PREDICTED: uncharacterized protein LOC103493407 [Cucumis melo] >KAA0060506.1 Gag... | [more] |
| KAA0061241.1 | 4.33e-203 | 87.90 | uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa] | [more] |
| KAA0065293.1 | 3.87e-199 | 88.47 | uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa] | [more] |
| XP_016903339.1 | 2.70e-196 | 85.59 | PREDICTED: uncharacterized protein LOC103502838 [Cucumis melo] | [more] |
| KAA0037703.1 | 2.69e-195 | 85.59 | uncharacterized protein E6C27_scaffold1593G00270 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
