IVF0011253 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGCGTCGAAGGGAAAGATGCCTAGGATCAAGGTTGAAACATATTAAATCAAACAAGGATGATCTAATTCTGATTGACGATAATACAGAGGTATATTTTTAAGTTTCTAAAGGTGTATTTGGAATGGTATAAATCGTTAAACAAAAAATAATATGTATATATATGGTAGGAGGAAGATAGATATGAAGAACCAATTCAGTACAAACCACTGCAAACTATATATCCAGATGATGATGAACAAGAGTTAAGAGGACCTACAGGTACACAGAATGTGGTGTACCAGGATTAG ATGGTGCGTCGAAGGGAAAGATGCCTAGGATCAAGGTTGAAACATATTAAATCAAACAAGGATGATCTAATTCTGATTGACGATAATACAGAGGAGGAAGATAGATATGAAGAACCAATTCAGTACAAACCACTGCAAACTATATATCCAGATGATGATGAACAAGAGTTAAGAGGACCTACAGGTACACAGAATGTGGTGTACCAGGATTAG ATGGTGCGTCGAAGGGAAAGATGCCTAGGATCAAGGTTGAAACATATTAAATCAAACAAGGATGATCTAATTCTGATTGACGATAATACAGAGGAGGAAGATAGATATGAAGAACCAATTCAGTACAAACCACTGCAAACTATATATCCAGATGATGATGAACAAGAGTTAAGAGGACCTACAGGTACACAGAATGTGGTGTACCAGGATTAG MVRRRERCLGSRLKHIKSNKDDLILIDDNTEEEDRYEEPIQYKPLQTIYPDDDEQELRGPTGTQNVVYQD Homology
BLAST of IVF0011253 vs. ExPASy TrEMBL
Match: A0A5A7TIM3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G00690 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 3.1e-20 Identity = 56/70 (80.00%), Postives = 60/70 (85.71%), Query Frame = 0
BLAST of IVF0011253 vs. ExPASy TrEMBL
Match: A0A5D3E3X1 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold974G00070 PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 9.9e-19 Identity = 50/70 (71.43%), Postives = 59/70 (84.29%), Query Frame = 0
BLAST of IVF0011253 vs. ExPASy TrEMBL
Match: A0A1S3CM64 (uncharacterized protein LOC103502558 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502558 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 5.5e-09 Identity = 33/53 (62.26%), Postives = 44/53 (83.02%), Query Frame = 0
BLAST of IVF0011253 vs. ExPASy TrEMBL
Match: A0A5A7VKG5 (Cell division protein ftsH OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold595G00090 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 5.1e-07 Identity = 34/70 (48.57%), Postives = 45/70 (64.29%), Query Frame = 0
BLAST of IVF0011253 vs. ExPASy TrEMBL
Match: A0A5D3E406 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G00510 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 5.1e-07 Identity = 32/68 (47.06%), Postives = 43/68 (63.24%), Query Frame = 0
BLAST of IVF0011253 vs. NCBI nr
Match: KAA0043162.1 (uncharacterized protein E6C27_scaffold110G00260 [Cucumis melo var. makuwa] >TYK12303.1 uncharacterized protein E5676_scaffold302G00690 [Cucumis melo var. makuwa]) HSP 1 Score: 105 bits (263), Expect = 1.79e-27 Identity = 56/69 (81.16%), Postives = 59/69 (85.51%), Query Frame = 0
BLAST of IVF0011253 vs. NCBI nr
Match: TYK30586.1 (protein Ycf2-like [Cucumis melo var. makuwa]) HSP 1 Score: 100 bits (250), Expect = 1.34e-23 Identity = 50/70 (71.43%), Postives = 59/70 (84.29%), Query Frame = 0
BLAST of IVF0011253 vs. NCBI nr
Match: XP_008464749.1 (PREDICTED: uncharacterized protein LOC103502558 isoform X2 [Cucumis melo]) HSP 1 Score: 68.6 bits (166), Expect = 2.15e-12 Identity = 33/53 (62.26%), Postives = 44/53 (83.02%), Query Frame = 0
BLAST of IVF0011253 vs. NCBI nr
Match: KAA0066916.1 (Cell division protein ftsH [Cucumis melo var. makuwa] >TYK30198.1 Cell division protein ftsH [Cucumis melo var. makuwa]) HSP 1 Score: 62.0 bits (149), Expect = 5.09e-10 Identity = 34/70 (48.57%), Postives = 45/70 (64.29%), Query Frame = 0
BLAST of IVF0011253 vs. NCBI nr
Match: KAA0035692.1 (Cell division protein ftsH [Cucumis melo var. makuwa]) HSP 1 Score: 61.6 bits (148), Expect = 1.56e-09 Identity = 27/43 (62.79%), Postives = 36/43 (83.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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