IVF0011215 (gene) Melon (IVF77) v1

Overview


Name	IVF0011215
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	BEACH domain-containing protein B isoform X2
Location	chr04: 1679530 .. 1679976 (-)
RNA-Seq Expression	IVF0011215
Synteny	IVF0011215

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTCAAGAATACAAACTGCAGATTGGTGAATTATCTGGACAGTATGATTTTAGATGGCCTATCCTCGACTGTAAATACAATGTCGCAGCACATTCAGGAGAATGTTCAGTTGTACCTTTAACTGATCTCACTCACGTACAATCTTGGAACAAATATGTTGTGAAGTTATGCAAAGTACTTTGTTCTTTTCTTCTTGCCCCTGAAGACGTTAAACCTCATCATCCTCAAGCATCTTCCGTTCGAATCATGACACCGGTTTCATTGGTCTATGGTGATCTTTCAATCAAATGGGTCATGAGGGTACTTGTTGCTGTGTTCCCTTGCATTAGGGCTTGCTCTAATCAAAATGATTTGCCTGCCCACTTGAGGTATGCCTCATGGTTGACTCCTCGAATTTTCTATTATTGTTATAGTTTGTGGATAAGGAACATTCCCATTGATTAA

mRNA sequence

ATGCTTCAAGAATACAAACTGCAGATTGGTGAATTATCTGGACAGTATGATTTTAGATGGCCTATCCTCGACTGTAAATACAATGTCGCAGCACATTCAGGAGAATGTTCAGTTGTACCTTTAACTGATCTCACTCACGTACAATCTTGGAACAAATATGTTGTGAAGTTATGCAAAGTACTTTGTTCTTTTCTTCTTGCCCCTGAAGACGTTAAACCTCATCATCCTCAAGCATCTTCCGTTCGAATCATGACACCGGTTTCATTGGTCTATGGTGATCTTTCAATCAAATGGGTCATGAGGGTACTTGTTGCTGTGTTCCCTTGCATTAGGGCTTGCTCTAATCAAAATGATTTGCCTGCCCACTTGAGGTATGCCTCATGGTTGACTCCTCGAATTTTCTATTATTGTTATAGTTTGTGGATAAGGAACATTCCCATTGATTAA

Coding sequence (CDS)

ATGCTTCAAGAATACAAACTGCAGATTGGTGAATTATCTGGACAGTATGATTTTAGATGGCCTATCCTCGACTGTAAATACAATGTCGCAGCACATTCAGGAGAATGTTCAGTTGTACCTTTAACTGATCTCACTCACGTACAATCTTGGAACAAATATGTTGTGAAGTTATGCAAAGTACTTTGTTCTTTTCTTCTTGCCCCTGAAGACGTTAAACCTCATCATCCTCAAGCATCTTCCGTTCGAATCATGACACCGGTTTCATTGGTCTATGGTGATCTTTCAATCAAATGGGTCATGAGGGTACTTGTTGCTGTGTTCCCTTGCATTAGGGCTTGCTCTAATCAAAATGATTTGCCTGCCCACTTGAGGTATGCCTCATGGTTGACTCCTCGAATTTTCTATTATTGTTATAGTTTGTGGATAAGGAACATTCCCATTGATTAA

Protein sequence

MLQEYKLQIGELSGQYDFRWPILDCKYNVAAHSGECSVVPLTDLTHVQSWNKYVVKLCKVLCSFLLAPEDVKPHHPQASSVRIMTPVSLVYGDLSIKWVMRVLVAVFPCIRACSNQNDLPAHLRYASWLTPRIFYYCYSLWIRNIPID

Homology

[Close]

BLAST of IVF0011215 vs. ExPASy TrEMBL
Match: A0A1S3CRY9 (BEACH domain-containing protein B isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503650 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 8.4e-68
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MLQEYKLQIGELSGQYDFRWPILDCKYNVAAHSGECSVVPLTDLTHVQSWNKYVVKLCKV 60
           MLQEYKLQIGELSGQYDFRWPILDCKYNVAAHSGECSVVPLTDLTHVQSWNKYVVKLCKV
Sbjct: 406 MLQEYKLQIGELSGQYDFRWPILDCKYNVAAHSGECSVVPLTDLTHVQSWNKYVVKLCKV 465

Query: 61  LCSFLLAPEDVKPHHPQASSVRIMTPVSLVYGDLSIKWVMRVLVAVFPCIRACSNQNDLP 120
           LCSFLLAPEDVKPHHPQASSVRIMTPVSLVYGDLSIKWVMRVLVAVFPCIRACSNQNDLP
Sbjct: 466 LCSFLLAPEDVKPHHPQASSVRIMTPVSLVYGDLSIKWVMRVLVAVFPCIRACSNQNDLP 525

Query: 121 AHLR 125
           AHLR
Sbjct: 526 AHLR 529

[Close]

BLAST of IVF0011215 vs. ExPASy TrEMBL
Match: A0A5A7T729 (BEACH domain-containing protein B isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G001930 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 8.4e-68
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MLQEYKLQIGELSGQYDFRWPILDCKYNVAAHSGECSVVPLTDLTHVQSWNKYVVKLCKV 60
           MLQEYKLQIGELSGQYDFRWPILDCKYNVAAHSGECSVVPLTDLTHVQSWNKYVVKLCKV
Sbjct: 380 MLQEYKLQIGELSGQYDFRWPILDCKYNVAAHSGECSVVPLTDLTHVQSWNKYVVKLCKV 439

Query: 61  LCSFLLAPEDVKPHHPQASSVRIMTPVSLVYGDLSIKWVMRVLVAVFPCIRACSNQNDLP 120
           LCSFLLAPEDVKPHHPQASSVRIMTPVSLVYGDLSIKWVMRVLVAVFPCIRACSNQNDLP
Sbjct: 440 LCSFLLAPEDVKPHHPQASSVRIMTPVSLVYGDLSIKWVMRVLVAVFPCIRACSNQNDLP 499

Query: 121 AHLR 125
           AHLR
Sbjct: 500 AHLR 503

[Close]

BLAST of IVF0011215 vs. ExPASy TrEMBL
Match: A0A5D3E639 (BEACH domain-containing protein B isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G005580 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 8.4e-68
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MLQEYKLQIGELSGQYDFRWPILDCKYNVAAHSGECSVVPLTDLTHVQSWNKYVVKLCKV 60
           MLQEYKLQIGELSGQYDFRWPILDCKYNVAAHSGECSVVPLTDLTHVQSWNKYVVKLCKV
Sbjct: 318 MLQEYKLQIGELSGQYDFRWPILDCKYNVAAHSGECSVVPLTDLTHVQSWNKYVVKLCKV 377

Query: 61  LCSFLLAPEDVKPHHPQASSVRIMTPVSLVYGDLSIKWVMRVLVAVFPCIRACSNQNDLP 120
           LCSFLLAPEDVKPHHPQASSVRIMTPVSLVYGDLSIKWVMRVLVAVFPCIRACSNQNDLP
Sbjct: 378 LCSFLLAPEDVKPHHPQASSVRIMTPVSLVYGDLSIKWVMRVLVAVFPCIRACSNQNDLP 437

Query: 121 AHLR 125
           AHLR
Sbjct: 438 AHLR 441

[Close]

BLAST of IVF0011215 vs. ExPASy TrEMBL
Match: A0A1S3CQK0 (BEACH domain-containing protein B isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503650 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 8.4e-68
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MLQEYKLQIGELSGQYDFRWPILDCKYNVAAHSGECSVVPLTDLTHVQSWNKYVVKLCKV 60
           MLQEYKLQIGELSGQYDFRWPILDCKYNVAAHSGECSVVPLTDLTHVQSWNKYVVKLCKV
Sbjct: 406 MLQEYKLQIGELSGQYDFRWPILDCKYNVAAHSGECSVVPLTDLTHVQSWNKYVVKLCKV 465

Query: 61  LCSFLLAPEDVKPHHPQASSVRIMTPVSLVYGDLSIKWVMRVLVAVFPCIRACSNQNDLP 120
           LCSFLLAPEDVKPHHPQASSVRIMTPVSLVYGDLSIKWVMRVLVAVFPCIRACSNQNDLP
Sbjct: 466 LCSFLLAPEDVKPHHPQASSVRIMTPVSLVYGDLSIKWVMRVLVAVFPCIRACSNQNDLP 525

Query: 121 AHLR 125
           AHLR
Sbjct: 526 AHLR 529

[Close]

BLAST of IVF0011215 vs. ExPASy TrEMBL
Match: A0A6J1J0N9 (BEACH domain-containing protein B isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480224 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 4.9e-60
Identity = 108/122 (88.52%), Postives = 118/122 (96.72%), Query Frame = 0


Query: 3   QEYKLQIGELSGQYDFRWPILDCKYNVAAHSGECSVVPLTDLTHVQSWNKYVVKLCKVLC 62
           +E+KLQIGELSGQ DFRWP LDCKYNVAA SGECSV+PL +LTH+QSWN+YVVKLC+VLC
Sbjct: 412 EEFKLQIGELSGQQDFRWPSLDCKYNVAAQSGECSVLPLANLTHIQSWNEYVVKLCRVLC 471

Query: 63  SFLLAPEDVKPHHPQASSVRIMTPVSLVYGDLSIKWVMRVLVAVFPCIRACSNQNDLPAH 122
           SFLLAP+DVKPHHPQASS+RIMTPVSLVYGDLSIKWVMRVLVAVFPCI+ACSNQNDLPAH
Sbjct: 472 SFLLAPDDVKPHHPQASSIRIMTPVSLVYGDLSIKWVMRVLVAVFPCIKACSNQNDLPAH 531

Query: 123 LR 125
           LR
Sbjct: 532 LR 533

[Close]

BLAST of IVF0011215 vs. NCBI nr
Match: TYK31268.1 (BEACH domain-containing protein B isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 264 bits (675), Expect = 4.45e-84
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MLQEYKLQIGELSGQYDFRWPILDCKYNVAAHSGECSVVPLTDLTHVQSWNKYVVKLCKV 60
           MLQEYKLQIGELSGQYDFRWPILDCKYNVAAHSGECSVVPLTDLTHVQSWNKYVVKLCKV
Sbjct: 318 MLQEYKLQIGELSGQYDFRWPILDCKYNVAAHSGECSVVPLTDLTHVQSWNKYVVKLCKV 377

Query: 61  LCSFLLAPEDVKPHHPQASSVRIMTPVSLVYGDLSIKWVMRVLVAVFPCIRACSNQNDLP 120
           LCSFLLAPEDVKPHHPQASSVRIMTPVSLVYGDLSIKWVMRVLVAVFPCIRACSNQNDLP
Sbjct: 378 LCSFLLAPEDVKPHHPQASSVRIMTPVSLVYGDLSIKWVMRVLVAVFPCIRACSNQNDLP 437

Query: 121 AHLR 124
           AHLR
Sbjct: 438 AHLR 441

[Close]

BLAST of IVF0011215 vs. NCBI nr
Match: KAA0038658.1 (BEACH domain-containing protein B isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 264 bits (675), Expect = 1.28e-78
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MLQEYKLQIGELSGQYDFRWPILDCKYNVAAHSGECSVVPLTDLTHVQSWNKYVVKLCKV 60
           MLQEYKLQIGELSGQYDFRWPILDCKYNVAAHSGECSVVPLTDLTHVQSWNKYVVKLCKV
Sbjct: 380 MLQEYKLQIGELSGQYDFRWPILDCKYNVAAHSGECSVVPLTDLTHVQSWNKYVVKLCKV 439

Query: 61  LCSFLLAPEDVKPHHPQASSVRIMTPVSLVYGDLSIKWVMRVLVAVFPCIRACSNQNDLP 120
           LCSFLLAPEDVKPHHPQASSVRIMTPVSLVYGDLSIKWVMRVLVAVFPCIRACSNQNDLP
Sbjct: 440 LCSFLLAPEDVKPHHPQASSVRIMTPVSLVYGDLSIKWVMRVLVAVFPCIRACSNQNDLP 499

Query: 121 AHLR 124
           AHLR
Sbjct: 500 AHLR 503

[Close]

BLAST of IVF0011215 vs. NCBI nr
Match: XP_008466150.1 (PREDICTED: BEACH domain-containing protein B isoform X2 [Cucumis melo])

HSP 1 Score: 264 bits (675), Expect = 1.28e-78
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MLQEYKLQIGELSGQYDFRWPILDCKYNVAAHSGECSVVPLTDLTHVQSWNKYVVKLCKV 60
           MLQEYKLQIGELSGQYDFRWPILDCKYNVAAHSGECSVVPLTDLTHVQSWNKYVVKLCKV
Sbjct: 406 MLQEYKLQIGELSGQYDFRWPILDCKYNVAAHSGECSVVPLTDLTHVQSWNKYVVKLCKV 465

Query: 61  LCSFLLAPEDVKPHHPQASSVRIMTPVSLVYGDLSIKWVMRVLVAVFPCIRACSNQNDLP 120
           LCSFLLAPEDVKPHHPQASSVRIMTPVSLVYGDLSIKWVMRVLVAVFPCIRACSNQNDLP
Sbjct: 466 LCSFLLAPEDVKPHHPQASSVRIMTPVSLVYGDLSIKWVMRVLVAVFPCIRACSNQNDLP 525

Query: 121 AHLR 124
           AHLR
Sbjct: 526 AHLR 529

[Close]

BLAST of IVF0011215 vs. NCBI nr
Match: XP_008466148.1 (PREDICTED: BEACH domain-containing protein B isoform X1 [Cucumis melo] >XP_008466149.1 PREDICTED: BEACH domain-containing protein B isoform X1 [Cucumis melo])

HSP 1 Score: 264 bits (675), Expect = 1.28e-78
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MLQEYKLQIGELSGQYDFRWPILDCKYNVAAHSGECSVVPLTDLTHVQSWNKYVVKLCKV 60
           MLQEYKLQIGELSGQYDFRWPILDCKYNVAAHSGECSVVPLTDLTHVQSWNKYVVKLCKV
Sbjct: 406 MLQEYKLQIGELSGQYDFRWPILDCKYNVAAHSGECSVVPLTDLTHVQSWNKYVVKLCKV 465

Query: 61  LCSFLLAPEDVKPHHPQASSVRIMTPVSLVYGDLSIKWVMRVLVAVFPCIRACSNQNDLP 120
           LCSFLLAPEDVKPHHPQASSVRIMTPVSLVYGDLSIKWVMRVLVAVFPCIRACSNQNDLP
Sbjct: 466 LCSFLLAPEDVKPHHPQASSVRIMTPVSLVYGDLSIKWVMRVLVAVFPCIRACSNQNDLP 525

Query: 121 AHLR 124
           AHLR
Sbjct: 526 AHLR 529

[Close]

BLAST of IVF0011215 vs. NCBI nr
Match: KAE8651401.1 (hypothetical protein Csa_001622 [Cucumis sativus])

HSP 1 Score: 259 bits (661), Expect = 9.78e-77
Identity = 120/124 (96.77%), Postives = 122/124 (98.39%), Query Frame = 0


Query: 1   MLQEYKLQIGELSGQYDFRWPILDCKYNVAAHSGECSVVPLTDLTHVQSWNKYVVKLCKV 60
           MLQEYKLQIGELSGQ+DFRWPI DCKYNVAAHSGECSVVPLTDLTHVQSWNKYVVKLCKV
Sbjct: 406 MLQEYKLQIGELSGQHDFRWPIFDCKYNVAAHSGECSVVPLTDLTHVQSWNKYVVKLCKV 465

Query: 61  LCSFLLAPEDVKPHHPQASSVRIMTPVSLVYGDLSIKWVMRVLVAVFPCIRACSNQNDLP 120
           LCSFLLAPEDVKPHHPQASS+RIMTPVSLVYGDLSIKWVMRVLVAVFPCIRACSNQNDLP
Sbjct: 466 LCSFLLAPEDVKPHHPQASSIRIMTPVSLVYGDLSIKWVMRVLVAVFPCIRACSNQNDLP 525

Query: 121 AHLR 124
            HLR
Sbjct: 526 VHLR 529

The following BLAST results are available for this feature:

BLAST of IVF0011215 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0011215 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CRY9	8.4e-68	100.00	BEACH domain-containing protein B isoform X1 OS=Cucumis melo OX=3656 GN=LOC10350...	[more]
A0A5A7T729	8.4e-68	100.00	BEACH domain-containing protein B isoform X1 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A5D3E639	8.4e-68	100.00	BEACH domain-containing protein B isoform X2 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A1S3CQK0	8.4e-68	100.00	BEACH domain-containing protein B isoform X2 OS=Cucumis melo OX=3656 GN=LOC10350...	[more]
A0A6J1J0N9	4.9e-60	88.52	BEACH domain-containing protein B isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]

BLAST of IVF0011215 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK31268.1	4.45e-84	100.00	BEACH domain-containing protein B isoform X2 [Cucumis melo var. makuwa]	[more]
KAA0038658.1	1.28e-78	100.00	BEACH domain-containing protein B isoform X1 [Cucumis melo var. makuwa]	[more]
XP_008466150.1	1.28e-78	100.00	PREDICTED: BEACH domain-containing protein B isoform X2 [Cucumis melo]	[more]
XP_008466148.1	1.28e-78	100.00	PREDICTED: BEACH domain-containing protein B isoform X1 [Cucumis melo] >XP_00846...	[more]
KAE8651401.1	9.78e-77	96.77	hypothetical protein Csa_001622 [Cucumis sativus]	[more]

BLAST of IVF0011215 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR13743:SF135	BEACH DOMAIN-CONTAINING PROTEIN B	coord: 37..125
None	No IPR available	PANTHER	PTHR13743	BEIGE/BEACH-RELATED	coord: 37..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0011215.1	IVF0011215.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm