IVF0011187 (gene) Melon (IVF77) v1

Overview
NameIVF0011187
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr03: 25806430 .. 25806741 (-)
RNA-Seq ExpressionIVF0011187
SyntenyIVF0011187
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGCTATGTCACCTCGACCTTATTCAGTCGAAAAGAAGATCGACGGAGATCAAGTGGAGGCAGAGATAGAAACGGAGGTTTCGGCGGCGTTGGGCCCAGCTGTGACGAGGCATATTGTGGTGAAGTCTTCGCCTTCTCACTCCAACCAAGCTCTAGAGAAAGCGGTGGTGCTGCGGCGGATCCGGCAACGGAAACGTGTTAACAAGTTGAGGGCGGCGGTTGGAGCTTTGTTCAGCTCACCGTTCACCGATAAAACAGAGGAAACCCATCAGAGAAAATGGGTGGACGAACCCTTCACTTCACTCTAG

mRNA sequence

ATGGCGGCTATGTCACCTCGACCTTATTCAGTCGAAAAGAAGATCGACGGAGATCAAGTGGAGGCAGAGATAGAAACGGAGGTTTCGGCGGCGTTGGGCCCAGCTGTGACGAGGCATATTGTGGTGAAGTCTTCGCCTTCTCACTCCAACCAAGCTCTAGAGAAAGCGGTGGTGCTGCGGCGGATCCGGCAACGGAAACGTGTTAACAAGTTGAGGGCGGCGGTTGGAGCTTTGTTCAGCTCACCGTTCACCGATAAAACAGAGGAAACCCATCAGAGAAAATGGGTGGACGAACCCTTCACTTCACTCTAG

Coding sequence (CDS)

ATGGCGGCTATGTCACCTCGACCTTATTCAGTCGAAAAGAAGATCGACGGAGATCAAGTGGAGGCAGAGATAGAAACGGAGGTTTCGGCGGCGTTGGGCCCAGCTGTGACGAGGCATATTGTGGTGAAGTCTTCGCCTTCTCACTCCAACCAAGCTCTAGAGAAAGCGGTGGTGCTGCGGCGGATCCGGCAACGGAAACGTGTTAACAAGTTGAGGGCGGCGGTTGGAGCTTTGTTCAGCTCACCGTTCACCGATAAAACAGAGGAAACCCATCAGAGAAAATGGGTGGACGAACCCTTCACTTCACTCTAG

Protein sequence

MAAMSPRPYSVEKKIDGDQVEAEIETEVSAALGPAVTRHIVVKSSPSHSNQALEKAVVLRRIRQRKRVNKLRAAVGALFSSPFTDKTEETHQRKWVDEPFTSL
Homology
BLAST of IVF0011187 vs. ExPASy TrEMBL
Match: A0A5A7VDJ5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G006120 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 5.2e-48
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0

Query: 1   MAAMSPRPYSVEKKIDGDQVEAEIETEVSAALGPAVTRHIVVKSSPSHSNQALEKAVVLR 60
           MAAMSPRPYSVEKKIDGDQVEAEIETEVSAALGPAVTRHIVVKSSPSHSNQALEKAVVLR
Sbjct: 1   MAAMSPRPYSVEKKIDGDQVEAEIETEVSAALGPAVTRHIVVKSSPSHSNQALEKAVVLR 60

Query: 61  RIRQRKRVNKLRAAVGALFSSPFTDKTEETHQRKWVDEPFTSL 104
           RIRQRKRVNKLRAAVGALFSSPFTDKTEETHQRKWVDEPFTSL
Sbjct: 61  RIRQRKRVNKLRAAVGALFSSPFTDKTEETHQRKWVDEPFTSL 103

BLAST of IVF0011187 vs. ExPASy TrEMBL
Match: A0A0A0LNJ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360760 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.3e-35
Identity = 93/113 (82.30%), Postives = 95/113 (84.07%), Query Frame = 0

Query: 1   MAAMSPRPYSVEKKIDGDQVEAEIETEVSA------ALGPAVTRHIVVKSSPS----HSN 60
           MAAMSP+PYSVEKKI GDQVEAEIETE +A      ALGPAVTRHIVVKSS S     SN
Sbjct: 1   MAAMSPQPYSVEKKIAGDQVEAEIETESAAAGAGADALGPAVTRHIVVKSSSSSSSYQSN 60

Query: 61  QALEKAVVLRRIRQRKRVNKLRAAVGALFSSPFTDKTEETHQRKWVDEPFTSL 104
           QALEKAVVLRRIRQRKRVNKLRAAVGALFSSPFTDKTE    RKWVDEPFTSL
Sbjct: 61  QALEKAVVLRRIRQRKRVNKLRAAVGALFSSPFTDKTE----RKWVDEPFTSL 109

BLAST of IVF0011187 vs. ExPASy TrEMBL
Match: A0A6P5MGE6 (uncharacterized protein LOC110274446 OS=Arachis duranensis OX=130453 GN=LOC110274446 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.3e-11
Identity = 47/100 (47.00%), Postives = 60/100 (60.00%), Query Frame = 0

Query: 4   MSPRPYSVEKKIDGDQVEAEIETEVSAALGPAVTRHIVVKSSPSHSNQALEKAVVLRRIR 63
           MS     VE     ++ EAE E E S    P VT  + +K S +     ++K VVLRRIR
Sbjct: 1   MSSNDKKVEVSKGREEDEAEFEKEESV---PTVTSKLFLKPSENQKPGNMDKEVVLRRIR 60

Query: 64  QRKRVNKLRAAVGALFSSPFTDKTEETHQRKWVDEPFTSL 104
            R+RVNK+RAAVG+ FSSPF+      H RKWVD+PF +L
Sbjct: 61  HRRRVNKVRAAVGSFFSSPFS----TDHHRKWVDDPFAAL 93

BLAST of IVF0011187 vs. ExPASy TrEMBL
Match: A0A2N9G0R5 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20842 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 3.3e-10
Identity = 42/86 (48.84%), Postives = 57/86 (66.28%), Query Frame = 0

Query: 20  VEAEIETEVSAALGPAVTRHIVVKSSPSHSNQALEKAVVLRRIRQRKRVNKLRAAVGALF 79
           +  + E EV     P VT H+ +K  P+HS Q L+K VVLRRIRQRKRVNK++A   AL 
Sbjct: 23  IAVDEEQEVPETQNP-VTSHLYIK--PTHSTQPLDKEVVLRRIRQRKRVNKVKATFQALV 82

Query: 80  SSPFTDKTEE--THQRKWVDEPFTSL 104
           SSPF+ K ++   H++KW D+ F +L
Sbjct: 83  SSPFSAKPDKVSVHKKKWADDAFAAL 105

BLAST of IVF0011187 vs. ExPASy TrEMBL
Match: A0A7J7D397 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW11G00807 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.6e-09
Identity = 37/82 (45.12%), Postives = 58/82 (70.73%), Query Frame = 0

Query: 24  IETEVSAALGPAVTRHIVVKSSPSHSNQALEKAVVLRRIRQRKRVNKLRAAVGALFSSPF 83
           IE +    +  +VT H+ +K  P+H+ Q L++ VVLRRIR RKRVNK++AA+ +LF SP 
Sbjct: 22  IEDQEDPEISNSVTTHLYLK--PAHTTQTLDREVVLRRIRNRKRVNKIKAALLSLFGSPI 81

Query: 84  TDKTEET--HQRKWVDEPFTSL 104
           + +TE+T   +++WVD+ F +L
Sbjct: 82  SSETEKTSVDKKRWVDDAFAAL 101

BLAST of IVF0011187 vs. NCBI nr
Match: KAA0065270.1 (hypothetical protein E6C27_scaffold82G006120 [Cucumis melo var. makuwa])

HSP 1 Score: 200 bits (509), Expect = 1.26e-64
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0

Query: 1   MAAMSPRPYSVEKKIDGDQVEAEIETEVSAALGPAVTRHIVVKSSPSHSNQALEKAVVLR 60
           MAAMSPRPYSVEKKIDGDQVEAEIETEVSAALGPAVTRHIVVKSSPSHSNQALEKAVVLR
Sbjct: 1   MAAMSPRPYSVEKKIDGDQVEAEIETEVSAALGPAVTRHIVVKSSPSHSNQALEKAVVLR 60

Query: 61  RIRQRKRVNKLRAAVGALFSSPFTDKTEETHQRKWVDEPFTSL 103
           RIRQRKRVNKLRAAVGALFSSPFTDKTEETHQRKWVDEPFTSL
Sbjct: 61  RIRQRKRVNKLRAAVGALFSSPFTDKTEETHQRKWVDEPFTSL 103

BLAST of IVF0011187 vs. NCBI nr
Match: KGN62559.1 (hypothetical protein Csa_022598 [Cucumis sativus])

HSP 1 Score: 159 bits (402), Expect = 3.17e-48
Identity = 93/113 (82.30%), Postives = 95/113 (84.07%), Query Frame = 0

Query: 1   MAAMSPRPYSVEKKIDGDQVEAEIETEVSAA------LGPAVTRHIVVKSSPS----HSN 60
           MAAMSP+PYSVEKKI GDQVEAEIETE +AA      LGPAVTRHIVVKSS S     SN
Sbjct: 1   MAAMSPQPYSVEKKIAGDQVEAEIETESAAAGAGADALGPAVTRHIVVKSSSSSSSYQSN 60

Query: 61  QALEKAVVLRRIRQRKRVNKLRAAVGALFSSPFTDKTEETHQRKWVDEPFTSL 103
           QALEKAVVLRRIRQRKRVNKLRAAVGALFSSPFTDKTE    RKWVDEPFTSL
Sbjct: 61  QALEKAVVLRRIRQRKRVNKLRAAVGALFSSPFTDKTE----RKWVDEPFTSL 109

BLAST of IVF0011187 vs. NCBI nr
Match: KAG6598407.1 (hypothetical protein SDJN03_08185, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 134 bits (337), Expect = 2.12e-38
Identity = 75/104 (72.12%), Postives = 83/104 (79.81%), Query Frame = 0

Query: 1   MAAMSPRPYSVEKKIDGDQVEAEIETEV-SAALGPAVTRHIVVKSSPSHSNQALEKAVVL 60
           MAAMSP P SVE  I G Q EAE+E E  +AA+GP VTRHI+VKSS S +  +LEKAVVL
Sbjct: 1   MAAMSPHPCSVENSIAGAQEEAEMEMETEAAAVGPDVTRHIMVKSSRS-TQVSLEKAVVL 60

Query: 61  RRIRQRKRVNKLRAAVGALFSSPFTDKTEETHQRKWVDEPFTSL 103
           RRIR RKRVNK +A VGALFSSPF DK +ET QRKWVDEPFTSL
Sbjct: 61  RRIRHRKRVNKFQAVVGALFSSPFADKADETRQRKWVDEPFTSL 103

BLAST of IVF0011187 vs. NCBI nr
Match: KAG6585633.1 (hypothetical protein SDJN03_18366, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020540.1 hypothetical protein SDJN02_17225, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 116 bits (290), Expect = 2.34e-31
Identity = 69/103 (66.99%), Postives = 74/103 (71.84%), Query Frame = 0

Query: 1   MAAMSPRPYSVEKKIDGDQVEAEIETEVSAALGPAVTRHIVVKSSPSHSNQALEKAVVLR 60
           MAA+SP  Y V     GDQ + +  T   AA  P VTRHI +KSS  HS Q LEKAVVLR
Sbjct: 1   MAAVSPHSYPV-----GDQEKDK--TVADAAASPDVTRHIRLKSS--HSTQVLEKAVVLR 60

Query: 61  RIRQRKRVNKLRAAVGALFSSPFTDKTEETHQRKWVDEPFTSL 103
           RIRQRKRVNK +A VGALFSSPF DKT E  QRKWVDEPFTSL
Sbjct: 61  RIRQRKRVNKFQAVVGALFSSPFGDKTGEARQRKWVDEPFTSL 94

BLAST of IVF0011187 vs. NCBI nr
Match: KAG7029360.1 (Wall-associated receptor kinase-like 14, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 107 bits (268), Expect = 1.32e-24
Identity = 63/91 (69.23%), Postives = 71/91 (78.02%), Query Frame = 0

Query: 1  MAAMSPRPYSVEKKIDGDQVEAEIETEV-SAALGPAVTRHIVVKSSPSHSNQALEKAVVL 60
          MAAMSP P SVE  I G Q EAE+E E  +AA+GP VTRHI+VKSS S +  +LEKAVVL
Sbjct: 1  MAAMSPHPCSVENSIAGAQEEAEMEMETEAAAVGPDVTRHIMVKSSRS-TQVSLEKAVVL 60

Query: 61 RRIRQRKRVNKLRAAVGALFSSPFTDKTEET 90
          RRIR RKRVNK +A VGALFSSPF DK +ET
Sbjct: 61 RRIRHRKRVNKFQAVVGALFSSPFADKADET 90

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7VDJ55.2e-48100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0LNJ01.3e-3582.30Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360760 PE=4 SV=1[more]
A0A6P5MGE62.3e-1147.00uncharacterized protein LOC110274446 OS=Arachis duranensis OX=130453 GN=LOC11027... [more]
A0A2N9G0R53.3e-1048.84Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20842 PE=4 SV=1[more]
A0A7J7D3971.6e-0945.12Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW11G00807 ... [more]
Match NameE-valueIdentityDescription
KAA0065270.11.26e-64100.00hypothetical protein E6C27_scaffold82G006120 [Cucumis melo var. makuwa][more]
KGN62559.13.17e-4882.30hypothetical protein Csa_022598 [Cucumis sativus][more]
KAG6598407.12.12e-3872.12hypothetical protein SDJN03_08185, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6585633.12.34e-3166.99hypothetical protein SDJN03_18366, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7029360.11.32e-2469.23Wall-associated receptor kinase-like 14, partial [Cucurbita argyrosperma subsp. ... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35324:SF4BNAA08G03750D PROTEINcoord: 1..103
NoneNo IPR availablePANTHERPTHR35324BNAA08G03750D PROTEINcoord: 1..103

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0011187.1IVF0011187.1mRNA