IVF0011058 (gene) Melon (IVF77) v1

Overview
NameIVF0011058
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr05: 13975748 .. 13975963 (+)
RNA-Seq ExpressionIVF0011058
SyntenyIVF0011058
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAACCCGATCCAGATCAAGATCGTCTGACATATGGATTGGGTCTCCCACTGAGTCATCAACTCCACCTAGGCCTTCAGCCAATCTCATCCGTCATTCTAGTGGAGTCGTTCAAATGAGGCCTCCTACCTCTCCTTCATCCATTAGGGAGACTTCTACTTCACCTACCACTTATTCTCAAGTTGTCACTCCCGATAAATGGGTTCGTGCCTAA

mRNA sequence

ATGGTAACCCGATCCAGATCAAGATCGTCTGACATATGGATTGGGTCTCCCACTGAGTCATCAACTCCACCTAGGCCTTCAGCCAATCTCATCCGTCATTCTAGTGGAGTCGTTCAAATGAGGCCTCCTACCTCTCCTTCATCCATTAGGGAGACTTCTACTTCACCTACCACTTATTCTCAAGTTGTCACTCCCGATAAATGGGTTCGTGCCTAA

Coding sequence (CDS)

ATGGTAACCCGATCCAGATCAAGATCGTCTGACATATGGATTGGGTCTCCCACTGAGTCATCAACTCCACCTAGGCCTTCAGCCAATCTCATCCGTCATTCTAGTGGAGTCGTTCAAATGAGGCCTCCTACCTCTCCTTCATCCATTAGGGAGACTTCTACTTCACCTACCACTTATTCTCAAGTTGTCACTCCCGATAAATGGGTTCGTGCCTAA

Protein sequence

MVTRSRSRSSDIWIGSPTESSTPPRPSANLIRHSSGVVQMRPPTSPSSIRETSTSPTTYSQVVTPDKWVRA
Homology
BLAST of IVF0011058 vs. ExPASy TrEMBL
Match: A0A5D3DJW3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold419G00630 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 9.7e-30
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0

Query: 1   MVTRSRSRSSDIWIGSPTESSTPPRPSANLIRHSSGVVQMRPPTSPSSIRETSTSPTTYS 60
           MVTRSRSRSSDIWIGSPTESSTPPRPSANLIRHSSGVVQMRPPTSPSSIRETSTSPTTYS
Sbjct: 41  MVTRSRSRSSDIWIGSPTESSTPPRPSANLIRHSSGVVQMRPPTSPSSIRETSTSPTTYS 100

Query: 61  QVVTPDKWVRA 72
           QVVTPDKWVRA
Sbjct: 101 QVVTPDKWVRA 111

BLAST of IVF0011058 vs. ExPASy TrEMBL
Match: A0A5A7U831 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00480 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 5.3e-28
Identity = 69/71 (97.18%), Postives = 69/71 (97.18%), Query Frame = 0

Query: 1   MVTRSRSRSSDIWIGSPTESSTPPRPSANLIRHSSGVVQMRPPTSPSSIRETSTSPTTYS 60
           MVTRSRSRSSDIWIGSPTESST PRP ANLIRHSSGVVQMRPPTSPSSIRETSTSPTTYS
Sbjct: 41  MVTRSRSRSSDIWIGSPTESSTRPRPLANLIRHSSGVVQMRPPTSPSSIRETSTSPTTYS 100

Query: 61  QVVTPDKWVRA 72
           QVVTPDKWVRA
Sbjct: 101 QVVTPDKWVRA 111

BLAST of IVF0011058 vs. ExPASy TrEMBL
Match: A0A5D3BW12 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G001130 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 5.9e-19
Identity = 54/68 (79.41%), Postives = 58/68 (85.29%), Query Frame = 0

Query: 1   MVTRSRSRSSDIWIGSPTESSTPPRPSANLIRHSSGVVQMRPPTSPSSIRETSTSPTTYS 60
           MVT+SRSRSS IWIGSPTESSTPPRPSANLIR   GV+QMR   SPSS +E+ T PTTYS
Sbjct: 46  MVTQSRSRSSGIWIGSPTESSTPPRPSANLIRPFGGVIQMRHVASPSSNKESFTPPTTYS 105

Query: 61  QVVTPDKW 69
           QVVTPDKW
Sbjct: 106 QVVTPDKW 113

BLAST of IVF0011058 vs. ExPASy TrEMBL
Match: E5GCE6 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 7.7e-19
Identity = 54/67 (80.60%), Postives = 57/67 (85.07%), Query Frame = 0

Query: 1   MVTRSRSRSSDIWIGSPTESSTPPRPSANLIRHSSGVVQMRPPTSPSSIRETSTSPTTYS 60
           +VTRSRSR S IWIGSPTESSTPPRPS NLIR S GV+QMRPP SPSS RE+ST PTTYS
Sbjct: 46  IVTRSRSRLSSIWIGSPTESSTPPRPSVNLIRPSGGVIQMRPPASPSSNRESSTPPTTYS 105

Query: 61  QVVTPDK 68
           Q VT DK
Sbjct: 106 QAVTLDK 112

BLAST of IVF0011058 vs. ExPASy TrEMBL
Match: A0A5A7URC1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold697G00720 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.0e-18
Identity = 56/66 (84.85%), Postives = 57/66 (86.36%), Query Frame = 0

Query: 2   VTRSRSRSSDIWIGSPTESSTPPRPSANLIRHSSGVVQMRPPTSPSSIRETSTSPTTYSQ 61
           VTRSRSRSS I  GSPTESSTPPRP ANLIR S GVVQMRPPTSPSS RE+ST PTTYSQ
Sbjct: 47  VTRSRSRSSSIRTGSPTESSTPPRPLANLIRPSGGVVQMRPPTSPSSNRESSTPPTTYSQ 106

Query: 62  VVTPDK 68
            VTPDK
Sbjct: 107 AVTPDK 112

BLAST of IVF0011058 vs. NCBI nr
Match: TYK23885.1 (hypothetical protein E5676_scaffold419G00630 [Cucumis melo var. makuwa])

HSP 1 Score: 136 bits (343), Expect = 8.86e-40
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0

Query: 1   MVTRSRSRSSDIWIGSPTESSTPPRPSANLIRHSSGVVQMRPPTSPSSIRETSTSPTTYS 60
           MVTRSRSRSSDIWIGSPTESSTPPRPSANLIRHSSGVVQMRPPTSPSSIRETSTSPTTYS
Sbjct: 41  MVTRSRSRSSDIWIGSPTESSTPPRPSANLIRHSSGVVQMRPPTSPSSIRETSTSPTTYS 100

Query: 61  QVVTPDKWVRA 71
           QVVTPDKWVRA
Sbjct: 101 QVVTPDKWVRA 111

BLAST of IVF0011058 vs. NCBI nr
Match: KAA0051330.1 (hypothetical protein E6C27_scaffold55G00480 [Cucumis melo var. makuwa])

HSP 1 Score: 130 bits (328), Expect = 1.71e-37
Identity = 69/71 (97.18%), Postives = 69/71 (97.18%), Query Frame = 0

Query: 1   MVTRSRSRSSDIWIGSPTESSTPPRPSANLIRHSSGVVQMRPPTSPSSIRETSTSPTTYS 60
           MVTRSRSRSSDIWIGSPTESST PRP ANLIRHSSGVVQMRPPTSPSSIRETSTSPTTYS
Sbjct: 41  MVTRSRSRSSDIWIGSPTESSTRPRPLANLIRHSSGVVQMRPPTSPSSIRETSTSPTTYS 100

Query: 61  QVVTPDKWVRA 71
           QVVTPDKWVRA
Sbjct: 101 QVVTPDKWVRA 111

BLAST of IVF0011058 vs. NCBI nr
Match: KAA0047770.1 (hypothetical protein E6C27_scaffold1059G00330 [Cucumis melo var. makuwa] >TYK02406.1 hypothetical protein E5676_scaffold155G001130 [Cucumis melo var. makuwa])

HSP 1 Score: 100 bits (250), Expect = 1.87e-25
Identity = 54/68 (79.41%), Postives = 58/68 (85.29%), Query Frame = 0

Query: 1   MVTRSRSRSSDIWIGSPTESSTPPRPSANLIRHSSGVVQMRPPTSPSSIRETSTSPTTYS 60
           MVT+SRSRSS IWIGSPTESSTPPRPSANLIR   GV+QMR   SPSS +E+ T PTTYS
Sbjct: 46  MVTQSRSRSSGIWIGSPTESSTPPRPSANLIRPFGGVIQMRHVASPSSNKESFTPPTTYS 105

Query: 61  QVVTPDKW 68
           QVVTPDKW
Sbjct: 106 QVVTPDKW 113

BLAST of IVF0011058 vs. NCBI nr
Match: KAA0056175.1 (hypothetical protein E6C27_scaffold697G00720 [Cucumis melo var. makuwa])

HSP 1 Score: 100 bits (249), Expect = 3.61e-25
Identity = 56/66 (84.85%), Postives = 57/66 (86.36%), Query Frame = 0

Query: 2   VTRSRSRSSDIWIGSPTESSTPPRPSANLIRHSSGVVQMRPPTSPSSIRETSTSPTTYSQ 61
           VTRSRSRSS I  GSPTESSTPPRP ANLIR S GVVQMRPPTSPSS RE+ST PTTYSQ
Sbjct: 47  VTRSRSRSSSIRTGSPTESSTPPRPLANLIRPSGGVVQMRPPTSPSSNRESSTPPTTYSQ 106

Query: 62  VVTPDK 67
            VTPDK
Sbjct: 107 AVTPDK 112

BLAST of IVF0011058 vs. NCBI nr
Match: KAA0041195.1 (hypothetical protein E6C27_scaffold128G001430 [Cucumis melo var. makuwa])

HSP 1 Score: 100 bits (248), Expect = 3.99e-25
Identity = 55/66 (83.33%), Postives = 58/66 (87.88%), Query Frame = 0

Query: 2  VTRSRSRSSDIWIGSPTESSTPPRPSANLIRHSSGVVQMRPPTSPSSIRETSTSPTTYSQ 61
          VTRS+SRSSDI IGSPTESSTPPRPSANLIR SSG VQMRPP SPSS  E+ST PTTYSQ
Sbjct: 15 VTRSKSRSSDIQIGSPTESSTPPRPSANLIRPSSGFVQMRPPASPSSNNESSTPPTTYSQ 74

Query: 62 VVTPDK 67
           VTP+K
Sbjct: 75 AVTPNK 80

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3DJW39.7e-30100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7U8315.3e-2897.18Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BW125.9e-1979.41Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
E5GCE67.7e-1980.60Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
A0A5A7URC11.0e-1884.85Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
TYK23885.18.86e-40100.00hypothetical protein E5676_scaffold419G00630 [Cucumis melo var. makuwa][more]
KAA0051330.11.71e-3797.18hypothetical protein E6C27_scaffold55G00480 [Cucumis melo var. makuwa][more]
KAA0047770.11.87e-2579.41hypothetical protein E6C27_scaffold1059G00330 [Cucumis melo var. makuwa] >TYK024... [more]
KAA0056175.13.61e-2584.85hypothetical protein E6C27_scaffold697G00720 [Cucumis melo var. makuwa][more]
KAA0041195.13.99e-2583.33hypothetical protein E6C27_scaffold128G001430 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..64
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..71

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0011058.1IVF0011058.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding