IVF0011026 (gene) Melon (IVF77) v1

Overview


Name	IVF0011026
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Nuclear transcription factor Y subunit C
Location	chr03: 21747751 .. 21748173 (+)
RNA-Seq Expression	IVF0011026
Synteny	IVF0011026

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAAGAGGAATCCGGCGAGGCTATCCGGCCAGAATTTCCAACGGGCCGAGTGAAGAAGATAATGAAGCTCGACAAGGACATTGGCAAAGTGAATTCAGAAGCCTTGTTTATAGTCTCATGCGCCACAGAACTCTTCCTTAAGCTCCTAGCTGAAAAATCTGCAGAAGTCGCCGCTGAGAAGAAACGGAAGACCGTGAAGCTTGAACACATCCGAATGGCCGTCAAAAGGCATCGCTCGATCAGTGATTTTCTTCTCGATTCACTTCCTCTTCCGTCTCAGCCGTCGGATGCGCCGGCGAAGGACGAGAATCGCATTCGCGCTGTCGTTGACAAAGTGGCTCCTGCAGGAACGCGTCGCATCGATGATTTCTTTCGTCGGCCAACTAAGACAACGTCGGCGGAGACCAACGAGTCATAG

mRNA sequence

ATGGAGGAAGAGGAATCCGGCGAGGCTATCCGGCCAGAATTTCCAACGGGCCGAGTGAAGAAGATAATGAAGCTCGACAAGGACATTGGCAAAGTGAATTCAGAAGCCTTGTTTATAGTCTCATGCGCCACAGAACTCTTCCTTAAGCTCCTAGCTGAAAAATCTGCAGAAGTCGCCGCTGAGAAGAAACGGAAGACCGTGAAGCTTGAACACATCCGAATGGCCGTCAAAAGGCATCGCTCGATCAGTGATTTTCTTCTCGATTCACTTCCTCTTCCGTCTCAGCCGTCGGATGCGCCGGCGAAGGACGAGAATCGCATTCGCGCTGTCGTTGACAAAGTGGCTCCTGCAGGAACGCGTCGCATCGATGATTTCTTTCGTCGGCCAACTAAGACAACGTCGGCGGAGACCAACGAGTCATAG

Coding sequence (CDS)

ATGGAGGAAGAGGAATCCGGCGAGGCTATCCGGCCAGAATTTCCAACGGGCCGAGTGAAGAAGATAATGAAGCTCGACAAGGACATTGGCAAAGTGAATTCAGAAGCCTTGTTTATAGTCTCATGCGCCACAGAACTCTTCCTTAAGCTCCTAGCTGAAAAATCTGCAGAAGTCGCCGCTGAGAAGAAACGGAAGACCGTGAAGCTTGAACACATCCGAATGGCCGTCAAAAGGCATCGCTCGATCAGTGATTTTCTTCTCGATTCACTTCCTCTTCCGTCTCAGCCGTCGGATGCGCCGGCGAAGGACGAGAATCGCATTCGCGCTGTCGTTGACAAAGTGGCTCCTGCAGGAACGCGTCGCATCGATGATTTCTTTCGTCGGCCAACTAAGACAACGTCGGCGGAGACCAACGAGTCATAG

Protein sequence

MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFIVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRIRAVVDKVAPAGTRRIDDFFRRPTKTTSAETNES

Homology

[Close]

BLAST of IVF0011026 vs. ExPASy Swiss-Prot
Match: B0XTT5 (NCT transcriptional regulatory complex subunit A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=nctA PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 8.9e-08
Identity = 34/97 (35.05%), Postives = 56/97 (57.73%), Query Frame = 0


Query: 10  IRPEFPTGRVKKIMKLDKDIGKVNSEALFIVSCATELFLKLLAEKSAEVAAEKKRKTVKL 69
           ++ +FP  R+K+IM+ D+D+GKV       VS A ELF+  L  K+A+ A ++  K V  
Sbjct: 130 VKTKFPVARIKRIMQADEDVGKVAQVTPIAVSKALELFMISLVTKAAKEARDRNSKRVTA 189

Query: 70  EHIRMAVKRHRSISDFLLDSL-PLPSQPSDAPAKDEN 106
            H++ AV +   + DFL D +  +P QP+     D++
Sbjct: 190 THLKQAVVKD-EVLDFLADIIAKVPDQPAGGRKHDDD 225

[Close]

BLAST of IVF0011026 vs. ExPASy Swiss-Prot
Match: Q4X095 (NCT transcriptional regulatory complex subunit A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=nctA PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 8.9e-08
Identity = 34/97 (35.05%), Postives = 56/97 (57.73%), Query Frame = 0


Query: 10  IRPEFPTGRVKKIMKLDKDIGKVNSEALFIVSCATELFLKLLAEKSAEVAAEKKRKTVKL 69
           ++ +FP  R+K+IM+ D+D+GKV       VS A ELF+  L  K+A+ A ++  K V  
Sbjct: 130 VKTKFPVARIKRIMQADEDVGKVAQVTPIAVSKALELFMISLVTKAAKEARDRNSKRVTA 189

Query: 70  EHIRMAVKRHRSISDFLLDSL-PLPSQPSDAPAKDEN 106
            H++ AV +   + DFL D +  +P QP+     D++
Sbjct: 190 THLKQAVVKD-EVLDFLADIIAKVPDQPAGGRKHDDD 225

[Close]

BLAST of IVF0011026 vs. ExPASy Swiss-Prot
Match: Q9W256 (DNA polymerase epsilon subunit 4 OS=Drosophila melanogaster OX=7227 GN=Mes4 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 5.8e-07
Identity = 28/69 (40.58%), Postives = 44/69 (63.77%), Query Frame = 0


Query: 8   EAIRPEFPTGRVKKIMKLDKDIGKVNSEALFIVSCATELFLKLLAEKSAEVAAEKKRKTV 67
           EA   + P  R++ IMKLD D+   N+EA+FIV+ A ELF+  L+ +S    A+ K+KT+
Sbjct: 72  EAKMTQLPLARIRNIMKLDPDLHMANNEAVFIVAKAVELFIASLSRESYTYTAQSKKKTI 131

Query: 68  KLEHIRMAV 77
           +   + MA+
Sbjct: 132 QKRDVDMAI 140

[Close]

BLAST of IVF0011026 vs. ExPASy Swiss-Prot
Match: Q2YDP3 (Dr1-associated corepressor OS=Bos taurus OX=9913 GN=DRAP1 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 9.9e-07
Identity = 29/75 (38.67%), Postives = 46/75 (61.33%), Query Frame = 0


Query: 14 FPTGRVKKIMKLDKDIGKVNSEALFIVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIR 73
          FP  R+KKIM+ D++IGKV +    I+S A ELFL+ L +K+ +V   +  KT+   H++
Sbjct: 12 FPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKTMTTSHLK 71

Query: 74 MAVKRHRSISDFLLD 89
            ++  +   DFL D
Sbjct: 72 QCIELEQQF-DFLKD 85

[Close]

BLAST of IVF0011026 vs. ExPASy Swiss-Prot
Match: Q14919 (Dr1-associated corepressor OS=Homo sapiens OX=9606 GN=DRAP1 PE=1 SV=3)

HSP 1 Score: 54.7 bits (130), Expect = 9.9e-07
Identity = 29/75 (38.67%), Postives = 46/75 (61.33%), Query Frame = 0


Query: 14 FPTGRVKKIMKLDKDIGKVNSEALFIVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIR 73
          FP  R+KKIM+ D++IGKV +    I+S A ELFL+ L +K+ +V   +  KT+   H++
Sbjct: 12 FPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKTMTTSHLK 71

Query: 74 MAVKRHRSISDFLLD 89
            ++  +   DFL D
Sbjct: 72 QCIELEQQF-DFLKD 85

[Close]

BLAST of IVF0011026 vs. ExPASy TrEMBL
Match: A0A5A7VG98 (Dr1-associated corepressor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00350 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.8e-67
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFIVSCATELFLKLLAEKSAEVAA 60
           MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFIVSCATELFLKLLAEKSAEVAA
Sbjct: 1   MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFIVSCATELFLKLLAEKSAEVAA 60

Query: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRIRAVVDKVAPAGTR 120
           EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRIRAVVDKVAPAGTR
Sbjct: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRIRAVVDKVAPAGTR 120

Query: 121 RIDDFFRRPTKTTSAETNES 141
           RIDDFFRRPTKTTSAETNES
Sbjct: 121 RIDDFFRRPTKTTSAETNES 140

[Close]

BLAST of IVF0011026 vs. ExPASy TrEMBL
Match: A0A1S3BDL4 (dr1-associated corepressor OS=Cucumis melo OX=3656 GN=LOC103488501 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.6e-66
Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFIVSCATELFLKLLAEKSAEVAA 60
           MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALF+VSCATELFLKLLAEKSAEVAA
Sbjct: 1   MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAA 60

Query: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRIRAVVDKVAPAGTR 120
           EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDA AKDENRIRAVVDKVAPAGTR
Sbjct: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDASAKDENRIRAVVDKVAPAGTR 120

Query: 121 RIDDFFRRPTKTTSAETNES 141
           RIDDFFRRPTKTTSAETNES
Sbjct: 121 RIDDFFRRPTKTTSAETNES 140

[Close]

BLAST of IVF0011026 vs. ExPASy TrEMBL
Match: A0A0A0KGV1 (CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G365140 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 1.9e-61
Identity = 130/137 (94.89%), Postives = 131/137 (95.62%), Query Frame = 0


Query: 1   MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFIVSCATELFLKLLAEKSAEVAA 60
           MEEEE GEAIRPEFPTGRVKKIMKLDKDIGKVNSEALF+VSCATELFLKLLAEKSAE AA
Sbjct: 1   MEEEEFGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAESAA 60

Query: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRIRAVVDKVAPAGTR 120
           EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDAPAKDENR RAVVDKVAP GTR
Sbjct: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRTRAVVDKVAPEGTR 120

Query: 121 RIDDFFRRPTKTTSAET 138
           RIDDFFRR TKT SAET
Sbjct: 121 RIDDFFRRSTKTKSAET 137

[Close]

BLAST of IVF0011026 vs. ExPASy TrEMBL
Match: A0A6J1K737 (DNA polymerase epsilon subunit C OS=Cucurbita maxima OX=3661 GN=LOC111492238 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.6e-60
Identity = 126/140 (90.00%), Postives = 132/140 (94.29%), Query Frame = 0


Query: 1   MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFIVSCATELFLKLLAEKSAEVAA 60
           M EEE GEAIRPEFP GR+KKIMKLDKDIGKVNSEALF+VSCATELFL+LLAEKSAEVAA
Sbjct: 1   MAEEEPGEAIRPEFPMGRIKKIMKLDKDIGKVNSEALFLVSCATELFLELLAEKSAEVAA 60

Query: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRIRAVVDKVAPAGTR 120
           EKKRKTVKLEHIR+AVKRH+SISDFLLDSLPLPSQPSDAPAKDENR R VVDKVAP GTR
Sbjct: 61  EKKRKTVKLEHIRIAVKRHQSISDFLLDSLPLPSQPSDAPAKDENRTRVVVDKVAPEGTR 120

Query: 121 RIDDFFRRPTKTTSAETNES 141
           RIDDFFRRP KT SAETNE+
Sbjct: 121 RIDDFFRRPEKTASAETNET 140

[Close]

BLAST of IVF0011026 vs. ExPASy TrEMBL
Match: A0A6J1HCT3 (DNA polymerase epsilon subunit C OS=Cucurbita moschata OX=3662 GN=LOC111462901 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.0e-59
Identity = 124/140 (88.57%), Postives = 131/140 (93.57%), Query Frame = 0


Query: 1   MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFIVSCATELFLKLLAEKSAEVAA 60
           M EEE GEAIRPEFP GR+KKIMKLDKDIGKVNSEALF+VSCATELFL+LLAEKS+EVAA
Sbjct: 1   MAEEEPGEAIRPEFPMGRIKKIMKLDKDIGKVNSEALFLVSCATELFLELLAEKSSEVAA 60

Query: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRIRAVVDKVAPAGTR 120
           EKKRKTVKLEHIR+AVKRH+SI DFLLDSLPLPSQPSDAPAKDENR R VVDKVAP GTR
Sbjct: 61  EKKRKTVKLEHIRIAVKRHQSIGDFLLDSLPLPSQPSDAPAKDENRTRVVVDKVAPEGTR 120

Query: 121 RIDDFFRRPTKTTSAETNES 141
           RIDDFFRRP KT SAETNE+
Sbjct: 121 RIDDFFRRPEKTASAETNET 140

[Close]

BLAST of IVF0011026 vs. NCBI nr
Match: KAA0064731.1 (dr1-associated corepressor [Cucumis melo var. makuwa])

HSP 1 Score: 267 bits (683), Expect = 5.61e-90
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFIVSCATELFLKLLAEKSAEVAA 60
           MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFIVSCATELFLKLLAEKSAEVAA
Sbjct: 1   MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFIVSCATELFLKLLAEKSAEVAA 60

Query: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRIRAVVDKVAPAGTR 120
           EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRIRAVVDKVAPAGTR
Sbjct: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRIRAVVDKVAPAGTR 120

Query: 121 RIDDFFRRPTKTTSAETNES 140
           RIDDFFRRPTKTTSAETNES
Sbjct: 121 RIDDFFRRPTKTTSAETNES 140

[Close]

BLAST of IVF0011026 vs. NCBI nr
Match: XP_008445504.1 (PREDICTED: dr1-associated corepressor [Cucumis melo])

HSP 1 Score: 263 bits (673), Expect = 1.88e-88
Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFIVSCATELFLKLLAEKSAEVAA 60
           MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALF+VSCATELFLKLLAEKSAEVAA
Sbjct: 1   MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAA 60

Query: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRIRAVVDKVAPAGTR 120
           EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDA AKDENRIRAVVDKVAPAGTR
Sbjct: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDASAKDENRIRAVVDKVAPAGTR 120

Query: 121 RIDDFFRRPTKTTSAETNES 140
           RIDDFFRRPTKTTSAETNES
Sbjct: 121 RIDDFFRRPTKTTSAETNES 140

[Close]

BLAST of IVF0011026 vs. NCBI nr
Match: XP_004144200.1 (DNA polymerase epsilon subunit C [Cucumis sativus] >KGN47612.1 hypothetical protein Csa_018931 [Cucumis sativus])

HSP 1 Score: 247 bits (630), Expect = 6.55e-82
Identity = 130/137 (94.89%), Postives = 131/137 (95.62%), Query Frame = 0


Query: 1   MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFIVSCATELFLKLLAEKSAEVAA 60
           MEEEE GEAIRPEFPTGRVKKIMKLDKDIGKVNSEALF+VSCATELFLKLLAEKSAE AA
Sbjct: 1   MEEEEFGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAESAA 60

Query: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRIRAVVDKVAPAGTR 120
           EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDAPAKDENR RAVVDKVAP GTR
Sbjct: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRTRAVVDKVAPEGTR 120

Query: 121 RIDDFFRRPTKTTSAET 137
           RIDDFFRR TKT SAET
Sbjct: 121 RIDDFFRRSTKTKSAET 137

[Close]

BLAST of IVF0011026 vs. NCBI nr
Match: XP_038884228.1 (NCT transcriptional regulatory complex subunit A [Benincasa hispida])

HSP 1 Score: 246 bits (627), Expect = 1.94e-81
Identity = 128/140 (91.43%), Postives = 131/140 (93.57%), Query Frame = 0


Query: 1   MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFIVSCATELFLKLLAEKSAEVAA 60
           M EEESG+AIRPEFPTGRVKKIMKLDKDI KVNSEALF+VSCATELFLKLLAEKSAEVAA
Sbjct: 1   MAEEESGDAIRPEFPTGRVKKIMKLDKDIEKVNSEALFLVSCATELFLKLLAEKSAEVAA 60

Query: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRIRAVVDKVAPAGTR 120
           EKKRKTVKLEHIR+AVKRHRSISDFLLDSLPLP QPSDAPAKDENR R VVDKV P GTR
Sbjct: 61  EKKRKTVKLEHIRIAVKRHRSISDFLLDSLPLPPQPSDAPAKDENRTRTVVDKVVPEGTR 120

Query: 121 RIDDFFRRPTKTTSAETNES 140
           RIDDFFRRP KTTSAE NES
Sbjct: 121 RIDDFFRRPAKTTSAENNES 140

[Close]

BLAST of IVF0011026 vs. NCBI nr
Match: XP_022997291.1 (DNA polymerase epsilon subunit C [Cucurbita maxima])

HSP 1 Score: 244 bits (623), Expect = 7.91e-81
Identity = 126/140 (90.00%), Postives = 132/140 (94.29%), Query Frame = 0


Query: 1   MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFIVSCATELFLKLLAEKSAEVAA 60
           M EEE GEAIRPEFP GR+KKIMKLDKDIGKVNSEALF+VSCATELFL+LLAEKSAEVAA
Sbjct: 1   MAEEEPGEAIRPEFPMGRIKKIMKLDKDIGKVNSEALFLVSCATELFLELLAEKSAEVAA 60

Query: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRIRAVVDKVAPAGTR 120
           EKKRKTVKLEHIR+AVKRH+SISDFLLDSLPLPSQPSDAPAKDENR R VVDKVAP GTR
Sbjct: 61  EKKRKTVKLEHIRIAVKRHQSISDFLLDSLPLPSQPSDAPAKDENRTRVVVDKVAPEGTR 120

Query: 121 RIDDFFRRPTKTTSAETNES 140
           RIDDFFRRP KT SAETNE+
Sbjct: 121 RIDDFFRRPEKTASAETNET 140

[Close]

BLAST of IVF0011026 vs. TAIR 10
Match: AT5G43250.1 (nuclear factor Y, subunit C13 )

HSP 1 Score: 150.6 bits (379), Expect = 9.4e-37
Identity = 89/139 (64.03%), Postives = 103/139 (74.10%), Query Frame = 0


Query: 1   MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFIVSCATELFLKLLAEKSAEVAA 60
           MEEEE   +IRPEFP GRVKKIMKLDKDI K+NSEAL +++ +TELFL  LAEKSA V A
Sbjct: 1   MEEEEG--SIRPEFPIGRVKKIMKLDKDINKINSEALHVITYSTELFLHFLAEKSAVVTA 60

Query: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRIRAVVDKVAPA--- 120
           EKKRKTV L+H+R+AVKRH+  SDFLLDSLPLP+QP           ++V DK  PA   
Sbjct: 61  EKKRKTVNLDHLRIAVKRHQPTSDFLLDSLPLPAQP-------VKHTKSVSDKKIPAPPI 120

Query: 121 GTRRIDDFFRR-PTKTTSA 136
           GTRRIDDFF +   KT SA
Sbjct: 121 GTRRIDDFFSKGKAKTDSA 130

[Close]

BLAST of IVF0011026 vs. TAIR 10
Match: AT3G12480.1 (nuclear factor Y, subunit C11 )

HSP 1 Score: 55.5 bits (132), Expect = 4.1e-08
Identity = 29/73 (39.73%), Postives = 48/73 (65.75%), Query Frame = 0


Query: 14 FPTGRVKKIMKLDKDIGKVNSEALFIVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIR 73
          FP  R+KKIM+ D+D+GK+      +VS + ELFL+ L +++ E+  E+  KTV   H++
Sbjct: 9  FPAARIKKIMQADEDVGKIALAVPVLVSKSLELFLQDLCDRTYEITLERGAKTVSSLHLK 68

Query: 74 MAVKRHRSISDFL 87
            V+R+ ++ DFL
Sbjct: 69 HCVERY-NVFDFL 80

[Close]

BLAST of IVF0011026 vs. TAIR 10
Match: AT1G07980.1 (nuclear factor Y, subunit C10 )

HSP 1 Score: 51.6 bits (122), Expect = 5.9e-07
Identity = 27/91 (29.67%), Postives = 57/91 (62.64%), Query Frame = 0


Query: 2   EEEESG-EAIRPEFPTGRVKKIMKLDKDIGKVNSEALFIVSCATELFLKLLAEKSAEVAA 61
           EE++ G E  + +FP  R+++IM+ D    ++  +A+F+V+ ATE+F++  +E++ + + 
Sbjct: 97  EEDDGGAEDAKIKFPMNRIRRIMRSDNSAPQIMQDAVFLVNKATEMFIERFSEEAYDSSV 156

Query: 62  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLP 92
           + K+K +  +H+   V   +   +FL DS+P
Sbjct: 157 KDKKKFIHYKHLSSVVSNDQRY-EFLADSVP 186

[Close]

BLAST of IVF0011026 vs. TAIR 10
Match: AT5G19490.1 (Histone superfamily protein )

HSP 1 Score: 51.6 bits (122), Expect = 5.9e-07
Identity = 33/105 (31.43%), Postives = 58/105 (55.24%), Query Frame = 0


Query: 10  IRPEFPTGRVKKIMKLDKDIGKVNSEALFIVSCATELFLKLLAEKSAEVAAEKKRKTVKL 69
           ++  FP  R+KKIM+ D+++GK+      +VS A ELFL+ L   + +V   +  KTV  
Sbjct: 5   LQTRFPATRIKKIMQTDEEVGKIAMAVPLLVSKALELFLQDLCNHTYDVTLSRGAKTVNA 64

Query: 70  EHIRMAVKRHRSISDFLLDSLPLPSQPSDAPAKDEN--RIRAVVD 113
            H++  V+   ++ DFL D++        +  +D++  + R VVD
Sbjct: 65  FHLKQCVQA-TNVFDFLRDTVAKVPDLGGSDTEDQSATKRRKVVD 108

[Close]

BLAST of IVF0011026 vs. TAIR 10
Match: AT5G27910.1 (nuclear factor Y, subunit C8 )

HSP 1 Score: 48.5 bits (114), Expect = 5.0e-06
Identity = 38/106 (35.85%), Postives = 55/106 (51.89%), Query Frame = 0


Query: 13  EFPTGRVKKIMKLDKDIGKVNSEALFIVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHI 72
           + P  R+KKIMK D D+  + SEA  ++S A E+F+  L  +S   A E KR T++  ++
Sbjct: 36  DLPITRIKKIMKYDPDVTMIASEAPILLSKACEMFIMDLTMRSWLHAQESKRVTLQKSNV 95

Query: 73  RMAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRIRAVVDKVAPAG 119
             AV +   I DFLLD      + S A A D   +  + D   P G
Sbjct: 96  DAAVAQ-TVIFDFLLDDDIEVKRESVAAAADPVAMPPIDDGELPPG 140

The following BLAST results are available for this feature:

BLAST of IVF0011026 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B0XTT5	8.9e-08	35.05	NCT transcriptional regulatory complex subunit A OS=Neosartorya fumigata (strain...	[more]
Q4X095	8.9e-08	35.05	NCT transcriptional regulatory complex subunit A OS=Neosartorya fumigata (strain...	[more]
Q9W256	5.8e-07	40.58	DNA polymerase epsilon subunit 4 OS=Drosophila melanogaster OX=7227 GN=Mes4 PE=2...	[more]
Q2YDP3	9.9e-07	38.67	Dr1-associated corepressor OS=Bos taurus OX=9913 GN=DRAP1 PE=2 SV=1	[more]
Q14919	9.9e-07	38.67	Dr1-associated corepressor OS=Homo sapiens OX=9606 GN=DRAP1 PE=1 SV=3	[more]

BLAST of IVF0011026 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VG98	1.8e-67	100.00	Dr1-associated corepressor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A1S3BDL4	2.6e-66	98.57	dr1-associated corepressor OS=Cucumis melo OX=3656 GN=LOC103488501 PE=4 SV=1	[more]
A0A0A0KGV1	1.9e-61	94.89	CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G3651...	[more]
A0A6J1K737	1.6e-60	90.00	DNA polymerase epsilon subunit C OS=Cucurbita maxima OX=3661 GN=LOC111492238 PE=...	[more]
A0A6J1HCT3	1.0e-59	88.57	DNA polymerase epsilon subunit C OS=Cucurbita moschata OX=3662 GN=LOC111462901 P...	[more]

BLAST of IVF0011026 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0064731.1	5.61e-90	100.00	dr1-associated corepressor [Cucumis melo var. makuwa]	[more]
XP_008445504.1	1.88e-88	98.57	PREDICTED: dr1-associated corepressor [Cucumis melo]	[more]
XP_004144200.1	6.55e-82	94.89	DNA polymerase epsilon subunit C [Cucumis sativus] >KGN47612.1 hypothetical prot...	[more]
XP_038884228.1	1.94e-81	91.43	NCT transcriptional regulatory complex subunit A [Benincasa hispida]	[more]
XP_022997291.1	7.91e-81	90.00	DNA polymerase epsilon subunit C [Cucurbita maxima]	[more]

BLAST of IVF0011026 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43250.1	9.4e-37	64.03	nuclear factor Y, subunit C13	[more]
AT3G12480.1	4.1e-08	39.73	nuclear factor Y, subunit C11	[more]
AT1G07980.1	5.9e-07	29.67	nuclear factor Y, subunit C10	[more]
AT5G19490.1	5.9e-07	31.43	Histone superfamily protein	[more]
AT5G27910.1	5.0e-06	35.85	nuclear factor Y, subunit C8	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 1..91 e-value: 2.0E-23 score: 84.8
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 12..91
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 13..76 e-value: 4.7E-20 score: 71.6
None	No IPR available	PANTHER	PTHR10252	HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED	coord: 2..130
None	No IPR available	PANTHER	PTHR10252:SF95	NUCLEAR FACTOR Y, SUBUNIT C13	coord: 2..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0011026.1	IVF0011026.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046982	protein heterodimerization activity