IVF0011019 (gene) Melon (IVF77) v1

Overview


Name	IVF0011019
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	GATA transcription factor 21
Location	chr02: 1871861 .. 1874008 (-)
RNA-Seq Expression	IVF0011019
Synteny	IVF0011019

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTTCTTTCTTTTAACTCATTCTTCTTTGATCTTCTCTTCTTCATTATCATGGCTCCTCCTTATCGGGACTCGTTTCCCTCCGATCACGACGATCTTGATCATCTTCACTACTCGTCTTCTCATCATCACCTCTTCTTCCTATCGTCACCCCAGCTCAGGCTTCTTCCTCCTCCTCCTCCTCTCTCTCTTTCACTGCCCTCGATCATTCCATGATCTCCGACGATCCTCGCTCGGTAGAGCTCAAACACGAGGTACGTTTTTTAATTAAATTCTATCACTTGGCTGTTTTTCACTCTATTGTATTGCAGTTGAGTGAAAAACAAGACCATATGAGAAGTACTATCATATGAAAAGCAAGTTTAGTTAATTGTTGAATAACTTCCTTCTAAGTTTTTCATAATATATAAGAATCAAGTTAAAAAGAAACCTATAGTTTGCGTTTTGTTTAAGAAAATTGTCAAAATGTCTTGAATTTGTTATATATATCGTTGAAATGACCAAGAACATATTTCTCTCTAATAATAGAATAATCTTTCACTTATTTGAGTTAGTGTGAAGAAGTATGTAATTCTCTGTGTCGGTCGATGTTTATTGTTTACATTTTTTTCATCTCAAACTCGTATTGTAACGATTAATATATGATTAATTTAATCGTTGTTGGTTTTAATAGGGTGGTGGGATTATGGGTTGTAACAATGATCAAAGTATTGGAAATCATGAAGATCATATAGAAGAAACTGGACTAAGGTTTACAATTTGGAAGCAGATTGATAAGAGAGAAACTTCAAGCTGTTGTGAGAATAATAATAACGATAATACTCACAATGATTCGGTGAAGTGGTCTTCTTCTTCTCCTCCTCCTCCAAGATCAAATTCATGATAAATTCTAACCTGCAAACTGAGACGACTCCCACCAGAACAATTGACAGCGGTCGAAATGTCCAAGATCTCAACCCACCGTCACCGTCACCATCTTCGATTGAACAAACGAACAAACGAACAAGCGCAACGACACTACACGAGGGCGGTGCCATAATCAGAACCTGTTCCGATTGTAACACCACAAAAACTCCCCTTTGGAGAAGCGGCCCTAGAGGTCCTAAGGTAATAATTCACAATTCAAATTTATTTTAAACAACAAATCTTATAATTTTATTTTATTTTTTAATTTTTCATATATGAGATTTATTATAATTATAATTATTAATTCTTTTTTTTTTAGAAAAACATATCAAAATTATGACTTAATTTGATTCTAAACGATTAAATTTGAACTTTATCTAACAATTTAGGTCATTTATTAAATACTTGCTATATATATATATATACACCAAAGTTTAATAATTTTACTATCTCTCCATAATTGTTCAACTTGAAAAAACAAATTTAATTTCCAAGTTTAGGGAAAGATTTATAACGACGTTTGAATCTAATTCCAAAGTTTACGGAAGAATATAATTTACGATATATGAAATGTATACAAAACCTTATCGATTGTTCACATGTTTTTTTTTTTTTTTTTTTGCTGTATTGTTATAATTTTTTAACTATTAAATGGTACTAGAATTTTAGCCGTCGAGCTTTTTAATTAGTATAATAGAAATGGATATCGATTCAAACCATAGATTTATTGATTATTACTAACTTATACTATATATATATTTCTCTCGAGCTTAATTAAATTACTTAACATGAGAGTAACATTCTATTTCCTCGAATAGAAAACAAAAACTCAACATTGCATCTAAGTATTTTTCAAATAATTCGCATTGTTGTGCAGTCACTTTGCAACGCATGTGGAATCCGACAGAGAAAAGCAAGACGAGCAATGGCAGAAGCAGCAGCGGCCGCCACGAACGGTGGGGCCGTAGTTTTGAAGACCAACAAGGCGGTACAACACAAGATAACGACGAAGCCAGCGACGACGATGACGACAACAACAGCATTGAAGAGAAAATACAAAGACGAGGTCGTGGTAGTCAGTGGCCACGGTGGCGGAGACAAGGGCGGAGGAAGAAAGGCGAAACTTTGTTTTGAAGAGATAAAAATGGGGGGAAGATTGAGTGAGATTTCTTCATCCTATCAACGAGTTTTCCCACAAGATGAAAGAGAAGCTGCCATTTGCTCATGACTCTATCTTACGGCC

mRNA sequence

TCTTTCTTTCTTTTAACTCATTCTTCTTTGATCTTCTCTTCTTCATTATCATGGCTCCTCCTTATCGGGACTCGTTTCCCTCCGATCACGACGATCTTGATCATCTTCACTACTCGTCTTCTCATCATCACCTCTTCTTCCTATCGTCACCCCAGCTCAGGCTTCTTCCTCCTCCTCCTCCTCTCTCTCTTTCACTGCCCTCGATCATTCCATGATCTCCGACGATCCTCGCTCGGTAGAGCTCAAACACGAGGGTGGTGGGATTATGGGTTGTAACAATGATCAAAGTATTGGAAATCATGAAGATCATATAGAAGAAACTGGACTAAGGTTTACAATTTGGAAGCAGATTGATAAGAGAGAAACTTCAAGCTGTTGTGAGAATAATAATAACGATAATACTCACAATGATTCGGTGAAGTGGTCTTCTTCTTCTCCTCCTCCTCCAAGATCAAATTCATGATAAATTCTAACCTGCAAACTGAGACGACTCCCACCAGAACAATTGACAGCGGTCGAAATGTCCAAGATCTCAACCCACCGTCACCGTCACCATCTTCGATTGAACAAACGAACAAACGAACAAGCGCAACGACACTACACGAGGGCGGTGCCATAATCAGAACCTGTTCCGATTGTAACACCACAAAAACTCCCCTTTGGAGAAGCGGCCCTAGAGGTCCTAAGTCACTTTGCAACGCATGTGGAATCCGACAGAGAAAAGCAAGACGAGCAATGGCAGAAGCAGCAGCGGCCGCCACGAACGGTGGGGCCGTAGTTTTGAAGACCAACAAGGCGGTACAACACAAGATAACGACGAAGCCAGCGACGACGATGACGACAACAACAGCATTGAAGAGAAAATACAAAGACGAGGTCGTGGTAGTCAGTGGCCACGGTGGCGGAGACAAGGGCGGAGGAAGAAAGGCGAAACTTTGTTTTGAAGAGATAAAAATGGGGGGAAGATTGAGTGAGATTTCTTCATCCTATCAACGAGTTTTCCCACAAGATGAAAGAGAAGCTGCCATTTGCTCATGACTCTATCTTACGGCC

Coding sequence (CDS)

ATGATAAATTCTAACCTGCAAACTGAGACGACTCCCACCAGAACAATTGACAGCGGTCGAAATGTCCAAGATCTCAACCCACCGTCACCGTCACCATCTTCGATTGAACAAACGAACAAACGAACAAGCGCAACGACACTACACGAGGGCGGTGCCATAATCAGAACCTGTTCCGATTGTAACACCACAAAAACTCCCCTTTGGAGAAGCGGCCCTAGAGGTCCTAAGTCACTTTGCAACGCATGTGGAATCCGACAGAGAAAAGCAAGACGAGCAATGGCAGAAGCAGCAGCGGCCGCCACGAACGGTGGGGCCGTAGTTTTGAAGACCAACAAGGCGGTACAACACAAGATAACGACGAAGCCAGCGACGACGATGACGACAACAACAGCATTGAAGAGAAAATACAAAGACGAGGTCGTGGTAGTCAGTGGCCACGGTGGCGGAGACAAGGGCGGAGGAAGAAAGGCGAAACTTTGTTTTGAAGAGATAAAAATGGGGGGAAGATTGAGTGAGATTTCTTCATCCTATCAACGAGTTTTCCCACAAGATGAAAGAGAAGCTGCCATTTGCTCATGA

Protein sequence

MINSNLQTETTPTRTIDSGRNVQDLNPPSPSPSSIEQTNKRTSATTLHEGGAIIRTCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAAATNGGAVVLKTNKAVQHKITTKPATTMTTTTALKRKYKDEVVVVSGHGGGDKGGGRKAKLCFEEIKMGGRLSEISSSYQRVFPQDEREAAICS

Homology

[Close]

BLAST of IVF0011019 vs. ExPASy Swiss-Prot
Match: Q5HZ36 (GATA transcription factor 21 OS=Arabidopsis thaliana OX=3702 GN=GATA21 PE=1 SV=2)

HSP 1 Score: 106.3 bits (264), Expect = 3.9e-22
Identity = 76/188 (40.43%), Postives = 100/188 (53.19%), Query Frame = 0


Query: 38  TNKRTSAT------TLHEGG-----AIIRTCSDCNTTKTPLWRSGPRGPKSLCNACGIRQ 97
           T K T+AT      T++E G      +IR CSDCNTTKTPLWRSGPRGPKSLCNACGIRQ
Sbjct: 202 TRKTTAATTENRYNTINENGYSNNNGVIRVCSDCNTTKTPLWRSGPRGPKSLCNACGIRQ 261

Query: 98  RKARRAMAEAAAAATNGGAVV------LKTNKAVQHKIT----------TKPATTMTTTT 157
           RKARRA   AAAAA +    V      L   K +Q+K            + P        
Sbjct: 262 RKARRAAMAAAAAAGDQEVAVAPRVQQLPLKKKLQNKKKRSNGGEKYNHSPPMVAKAKKC 321

Query: 158 ALKRKYKDEVVVVSGHGGGDKGGGRKA--------KLCFEEIKMGGRLSEISSSYQRVFP 191
            +K + + E+   +  G  +      +        K CF+++ +   +   SS+YQ+VFP
Sbjct: 322 KIKEEEEKEMEAETVAGDSEISKSTTSSNSSISSNKFCFDDLTI---MLSKSSAYQQVFP 381

[Close]

BLAST of IVF0011019 vs. ExPASy Swiss-Prot
Match: Q9SZI6 (Putative GATA transcription factor 22 OS=Arabidopsis thaliana OX=3702 GN=GATA22 PE=1 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.4e-19
Identity = 73/176 (41.48%), Postives = 94/176 (53.41%), Query Frame = 0


Query: 31  SPSSIEQTNKRTSATTL-------HEGGAIIRTCSDCNTTKTPLWRSGPRGPKSLCNACG 90
           S SS + TN   S+          +    +IR CSDCNTTKTPLWRSGPRGPKSLCNACG
Sbjct: 168 SDSSKQHTNNDQSSNLSNSERQNGYNNDCVIRICSDCNTTKTPLWRSGPRGPKSLCNACG 227

Query: 91  IRQRKARR-AMAEAAAAATNG-GAVVLKTNKAVQHKITTKPATTMT----TTTALKRKYK 150
           IRQRKARR AMA A A A +G    V+K     ++KI+      ++         KR   
Sbjct: 228 IRQRKARRAAMATATATAVSGVSPPVMKKKMQNKNKISNGVYKILSPLPLKVNTCKRMIT 287

Query: 151 DEVVVVSGHGGGDKGG---GRKAKLCFEEIKMGGRLSEISSSYQRVFPQDEREAAI 191
            E   ++                 + F+++ +   L   SS+YQ+VFPQDE+EAAI
Sbjct: 288 LEETALAEDLETQSNSTMLSSSDNIYFDDLAL---LLSKSSAYQQVFPQDEKEAAI 340

[Close]

BLAST of IVF0011019 vs. ExPASy Swiss-Prot
Match: Q6YW48 (Protein CYTOKININ-RESPONSIVE GATA TRANSCRIPTION FACTOR 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CGA1 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.1e-19
Identity = 52/92 (56.52%), Postives = 58/92 (63.04%), Query Frame = 0


Query: 32  PSSIEQTNKRTSATTLHEGGAIIRTCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARR 91
           P    Q ++  S   L +   ++R CSDCNTTKTPLWRSGP GPKSLCNACGIRQRKARR
Sbjct: 153 PRRRAQAHQDESQQQLQQALGVVRVCSDCNTTKTPLWRSGPCGPKSLCNACGIRQRKARR 212

Query: 92  AMAEAAAAATNGGAVVLKTNKAVQHKITTKPA 124
           AM    AAA NGGA V          +  KPA
Sbjct: 213 AM----AAAANGGAAVAPAKSVAAAPVNNKPA 240

[Close]

BLAST of IVF0011019 vs. ExPASy Swiss-Prot
Match: Q8LC59 (GATA transcription factor 23 OS=Arabidopsis thaliana OX=3702 GN=GATA23 PE=2 SV=2)

HSP 1 Score: 72.0 bits (175), Expect = 8.2e-12
Identity = 31/46 (67.39%), Postives = 35/46 (76.09%), Query Frame = 0


Query: 47 LHEGGAIIRTCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRA 93
          + E    IR CS+C TTKTP+WR GP GPKSLCNACGIR RK RR+
Sbjct: 18 MKEEKGTIRCCSECKTTKTPMWRGGPTGPKSLCNACGIRHRKQRRS 63

[Close]

BLAST of IVF0011019 vs. ExPASy Swiss-Prot
Match: Q9FJ10 (GATA transcription factor 16 OS=Arabidopsis thaliana OX=3702 GN=GATA16 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 4.1e-11
Identity = 30/41 (73.17%), Postives = 33/41 (80.49%), Query Frame = 0


Query: 55 RTCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAE 96
          +TC+DC T+KTPLWR GP GPKSLCNACGIR RK RR   E
Sbjct: 36 KTCADCGTSKTPLWRGGPVGPKSLCNACGIRNRKKRRGGTE 76

[Close]

BLAST of IVF0011019 vs. ExPASy TrEMBL
Match: A0A1S3BPL1 (GATA transcription factor 21 OS=Cucumis melo OX=3656 GN=LOC103492321 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 2.0e-98
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0


Query: 1   MINSNLQTETTPTRTIDSGRNVQDLNPPSPSPSSIEQTNKRTSATTLHEGGAIIRTCSDC 60
           MINSNLQTETTPTRTIDSGRNVQDLNPPSPSPSSIEQTNKRTSATTLHEGGAIIRTCSDC
Sbjct: 138 MINSNLQTETTPTRTIDSGRNVQDLNPPSPSPSSIEQTNKRTSATTLHEGGAIIRTCSDC 197

Query: 61  NTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAAATNGGAVVLKTNKAVQHKITT 120
           NTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAAATNGGAVVLKTNKAVQHKITT
Sbjct: 198 NTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAAATNGGAVVLKTNKAVQHKITT 257

Query: 121 KPATTMTTTTALKRKYKDEVVVVSGHGGGDKGGGRKAKLCFEEIKMGGRLSEISSSYQRV 180
           KPATTMTTTTALKRKYKDEVVVVSGHGGGDKGGGRKAKLCFEEIKMGGRLSEISSSYQRV
Sbjct: 258 KPATTMTTTTALKRKYKDEVVVVSGHGGGDKGGGRKAKLCFEEIKMGGRLSEISSSYQRV 317

Query: 181 FPQDEREAAI 191
           FPQDEREAAI
Sbjct: 318 FPQDEREAAI 327

[Close]

BLAST of IVF0011019 vs. ExPASy TrEMBL
Match: A0A0A0LZE4 (GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G587970 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 4.4e-77
Identity = 165/190 (86.84%), Postives = 169/190 (88.95%), Query Frame = 0


Query: 1   MINSNLQTETTPTRTIDSGRNVQDLNPPSPSPSSIEQTNKRTSATTLHEGGAIIRTCSDC 60
           MINSN QTETT TRTI+SGRNVQDLN  SPSPSS EQTNKRTS TTLH+GGAIIRTCSDC
Sbjct: 136 MINSN-QTETTLTRTIESGRNVQDLN-NSPSPSSFEQTNKRTSTTTLHDGGAIIRTCSDC 195

Query: 61  NTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAAATNGGAVVLKTNKAVQHKITT 120
           NTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAAA NGGAVV+KTNK VQHKITT
Sbjct: 196 NTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAAAANGGAVVVKTNKVVQHKITT 255

Query: 121 KPATTMTTTTALKRKYKDEVVVVSGHGGGDKGGGRKAKLCFEEIKMGGRLSEISSSYQRV 180
           KPATT      LKRKYKDEVVVV    GGDK GG + KLCFEEIKMGGRLSEISSSYQRV
Sbjct: 256 KPATT------LKRKYKDEVVVV----GGDKKGGGRKKLCFEEIKMGGRLSEISSSYQRV 313

Query: 181 FPQDEREAAI 191
           FPQDEREAAI
Sbjct: 316 FPQDEREAAI 313

[Close]

BLAST of IVF0011019 vs. ExPASy TrEMBL
Match: A0A6J1ELP1 (GATA transcription factor 21-like OS=Cucurbita moschata OX=3662 GN=LOC111433707 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 2.1e-50
Identity = 131/197 (66.50%), Postives = 145/197 (73.60%), Query Frame = 0


Query: 1   MINSNLQTETTPTRTIDSGRNVQDLNP--PSPSPSSIEQTNKRTSATTLHE-GGAIIRTC 60
           +IN N QTE TPT+TID+ RN QDLNP  PSPSPS  +QTNKR    TL++ GGAIIRTC
Sbjct: 118 VINYN-QTE-TPTKTIDAHRNFQDLNPMSPSPSPSPSDQTNKR---NTLNDGGGAIIRTC 177

Query: 61  SDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAAATNGGAVVLKTNKAVQHK 120
           SDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAA    N  AVVLKTNKA+   
Sbjct: 178 SDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAANGG-NSTAVVLKTNKAI--- 237

Query: 121 ITTKPATTMTTTTALKRKYKDEV----VVVSGHGGGDKGGGRKAKLCFEEIKMGGRLSEI 180
              KPA TM      KRK+K+ V       +       GGG + KLC E++KMG RLSEI
Sbjct: 238 --IKPAATM------KRKHKEVVAATTTTAAAAAASAAGGGGRRKLCVEDVKMGRRLSEI 297

Query: 181 SSSYQRVFPQDEREAAI 191
           SS+YQRVFPQDEREAAI
Sbjct: 298 SSTYQRVFPQDEREAAI 297

[Close]

BLAST of IVF0011019 vs. ExPASy TrEMBL
Match: A0A6J1HT96 (GATA transcription factor 21-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467247 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 1.5e-48
Identity = 127/195 (65.13%), Postives = 142/195 (72.82%), Query Frame = 0


Query: 1   MINSNLQTETTPTRTIDSGRNVQDLNP--PSPSPSSIEQTNKRTSATTLHEGGAIIRTCS 60
           +IN N QTET   +TID+ RN QDLNP  PSPSPS  +QTNKR +      GGAIIRTCS
Sbjct: 127 VINYN-QTETL-AKTIDAHRNFQDLNPMSPSPSPSPSDQTNKRNALN--DGGGAIIRTCS 186

Query: 61  DCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAAATNGG---AVVLKTNKAVQ 120
           DCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAA    NGG   AVVLKTNKA+ 
Sbjct: 187 DCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAA----NGGNPTAVVLKTNKAI- 246

Query: 121 HKITTKPATTMTTTTALKRKYKDEVVVVSGHGGGDKGGGRKAKLCFEEIKMGGRLSEISS 180
                KPA TM      KRK+K+ V   +       GGG + KLC E++KMG RL+EI+S
Sbjct: 247 ----IKPAATM------KRKHKEVVAATTATTAA--GGGGRRKLCVEDVKMGRRLNEIAS 300

Query: 181 SYQRVFPQDEREAAI 191
           +YQRVFPQDEREAAI
Sbjct: 307 TYQRVFPQDEREAAI 300

[Close]

BLAST of IVF0011019 vs. ExPASy TrEMBL
Match: A0A6J1HXZ7 (GATA transcription factor 21-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467247 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 1.5e-48
Identity = 127/195 (65.13%), Postives = 142/195 (72.82%), Query Frame = 0


Query: 1   MINSNLQTETTPTRTIDSGRNVQDLNP--PSPSPSSIEQTNKRTSATTLHEGGAIIRTCS 60
           +IN N QTET   +TID+ RN QDLNP  PSPSPS  +QTNKR +      GGAIIRTCS
Sbjct: 119 VINYN-QTETL-AKTIDAHRNFQDLNPMSPSPSPSPSDQTNKRNALN--DGGGAIIRTCS 178

Query: 61  DCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAAATNGG---AVVLKTNKAVQ 120
           DCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAA    NGG   AVVLKTNKA+ 
Sbjct: 179 DCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAA----NGGNPTAVVLKTNKAI- 238

Query: 121 HKITTKPATTMTTTTALKRKYKDEVVVVSGHGGGDKGGGRKAKLCFEEIKMGGRLSEISS 180
                KPA TM      KRK+K+ V   +       GGG + KLC E++KMG RL+EI+S
Sbjct: 239 ----IKPAATM------KRKHKEVVAATTATTAA--GGGGRRKLCVEDVKMGRRLNEIAS 292

Query: 181 SYQRVFPQDEREAAI 191
           +YQRVFPQDEREAAI
Sbjct: 299 TYQRVFPQDEREAAI 292

[Close]

BLAST of IVF0011019 vs. NCBI nr
Match: XP_008450852.1 (PREDICTED: GATA transcription factor 21 [Cucumis melo])

HSP 1 Score: 365 bits (936), Expect = 1.27e-124
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0


Query: 1   MINSNLQTETTPTRTIDSGRNVQDLNPPSPSPSSIEQTNKRTSATTLHEGGAIIRTCSDC 60
           MINSNLQTETTPTRTIDSGRNVQDLNPPSPSPSSIEQTNKRTSATTLHEGGAIIRTCSDC
Sbjct: 138 MINSNLQTETTPTRTIDSGRNVQDLNPPSPSPSSIEQTNKRTSATTLHEGGAIIRTCSDC 197

Query: 61  NTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAAATNGGAVVLKTNKAVQHKITT 120
           NTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAAATNGGAVVLKTNKAVQHKITT
Sbjct: 198 NTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAAATNGGAVVLKTNKAVQHKITT 257

Query: 121 KPATTMTTTTALKRKYKDEVVVVSGHGGGDKGGGRKAKLCFEEIKMGGRLSEISSSYQRV 180
           KPATTMTTTTALKRKYKDEVVVVSGHGGGDKGGGRKAKLCFEEIKMGGRLSEISSSYQRV
Sbjct: 258 KPATTMTTTTALKRKYKDEVVVVSGHGGGDKGGGRKAKLCFEEIKMGGRLSEISSSYQRV 317

Query: 181 FPQDEREAAI 190
           FPQDEREAAI
Sbjct: 318 FPQDEREAAI 327

[Close]

BLAST of IVF0011019 vs. NCBI nr
Match: XP_004135818.1 (putative GATA transcription factor 22 [Cucumis sativus] >KGN66237.1 hypothetical protein Csa_007289 [Cucumis sativus])

HSP 1 Score: 295 bits (754), Expect = 3.59e-97
Identity = 165/190 (86.84%), Postives = 169/190 (88.95%), Query Frame = 0


Query: 1   MINSNLQTETTPTRTIDSGRNVQDLNPPSPSPSSIEQTNKRTSATTLHEGGAIIRTCSDC 60
           MINSN QTETT TRTI+SGRNVQDLN  SPSPSS EQTNKRTS TTLH+GGAIIRTCSDC
Sbjct: 136 MINSN-QTETTLTRTIESGRNVQDLNN-SPSPSSFEQTNKRTSTTTLHDGGAIIRTCSDC 195

Query: 61  NTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAAATNGGAVVLKTNKAVQHKITT 120
           NTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAAA NGGAVV+KTNK VQHKITT
Sbjct: 196 NTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAAAANGGAVVVKTNKVVQHKITT 255

Query: 121 KPATTMTTTTALKRKYKDEVVVVSGHGGGDKGGGRKAKLCFEEIKMGGRLSEISSSYQRV 180
           KPATT      LKRKYKDEVVVV    GGDK GG + KLCFEEIKMGGRLSEISSSYQRV
Sbjct: 256 KPATT------LKRKYKDEVVVV----GGDKKGGGRKKLCFEEIKMGGRLSEISSSYQRV 313

Query: 181 FPQDEREAAI 190
           FPQDEREAAI
Sbjct: 316 FPQDEREAAI 313

[Close]

BLAST of IVF0011019 vs. NCBI nr
Match: XP_038878562.1 (GATA transcription factor 21 [Benincasa hispida])

HSP 1 Score: 259 bits (662), Expect = 3.74e-83
Identity = 157/195 (80.51%), Postives = 163/195 (83.59%), Query Frame = 0


Query: 1   MINSNLQTETTPTRTIDSGRNVQDLNP--PSPSPSSIEQTNKRTSATTLHEGGAIIRTCS 60
           +INSN QTET  TRTIDSGRN QDLN   P+PSPSS +QTNKRTS T L +GGAIIRTCS
Sbjct: 130 LINSN-QTETA-TRTIDSGRNFQDLNQTSPTPSPSSFDQTNKRTS-TALQDGGAIIRTCS 189

Query: 61  DCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAAATNG---GAVVLKTNKAVQ 120
           DCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAAA NG    AVVLK+NKAVQ
Sbjct: 190 DCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAAAANGEKPAAVVLKSNKAVQ 249

Query: 121 HKITTKPATTMTTTTALKRKYKDEVVVVSGHGGGDKGGGRKAKLCFEEIKMGGRLSEISS 180
           HKI TK A   TTTT LKRK KD VV   G GGGD GGGRK  LCFEEIK+G RLSEISS
Sbjct: 250 HKIMTKSAVA-TTTTTLKRKCKDAVVQGEG-GGGDSGGGRK-NLCFEEIKIGRRLSEISS 309

Query: 181 SYQRVFPQDEREAAI 190
           SYQRVFPQDEREAAI
Sbjct: 310 SYQRVFPQDEREAAI 318

[Close]

BLAST of IVF0011019 vs. NCBI nr
Match: XP_023530322.1 (GATA transcription factor 21-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 212 bits (540), Expect = 4.69e-65
Identity = 131/194 (67.53%), Postives = 145/194 (74.74%), Query Frame = 0


Query: 1   MINSNLQTETTPTRTIDSGRNVQDLNPPSPSPSSIEQTNKRTSATTLHEGG-AIIRTCSD 60
           +IN N QTET PT+TID+ RN QDLNP  PSPS  +QTNKR    TL++GG AIIRTCSD
Sbjct: 118 VINYN-QTET-PTKTIDALRNFQDLNPMPPSPSPSDQTNKRN---TLNDGGGAIIRTCSD 177

Query: 61  CNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAAATNGG---AVVLKTNKAVQH 120
           CNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAA    NGG   AVVLKTNKA+  
Sbjct: 178 CNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAA----NGGNSTAVVLKTNKAI-- 237

Query: 121 KITTKPATTMTTTTALKRKYKDEVVVVSGHGGGDKGGGRKAKLCFEEIKMGGRLSEISSS 180
               KPA TM      KRK+K+ V   +       GGG + KLC E++KMG RLSEISS+
Sbjct: 238 ---IKPAATM------KRKHKEVVATTTAAAASAAGGGGRRKLCVEDVKMGRRLSEISST 291

Query: 181 YQRVFPQDEREAAI 190
           YQRVFPQDEREAAI
Sbjct: 298 YQRVFPQDEREAAI 291

[Close]

BLAST of IVF0011019 vs. NCBI nr
Match: KAG6588037.1 (GATA transcription factor 21, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021934.1 GATA transcription factor 21, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 208 bits (530), Expect = 1.71e-63
Identity = 133/198 (67.17%), Postives = 147/198 (74.24%), Query Frame = 0


Query: 1   MINSNLQTETTPTRTIDSGRNVQDLNP--PSPSPSSIEQTNKRTSATTLHEGG-AIIRTC 60
           +IN N QTET PT+TID+ RN QDLNP  PSPSPS  +QTNKR    TL++GG AIIRTC
Sbjct: 118 VINYN-QTET-PTKTIDAHRNFQDLNPMSPSPSPSPSDQTNKRN---TLNDGGGAIIRTC 177

Query: 61  SDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAAATNGG---AVVLKTNKAV 120
           SDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAA    NGG   AVVLKTNKA+
Sbjct: 178 SDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAA----NGGNSTAVVLKTNKAI 237

Query: 121 QHKITTKPATTMTTTTALKRKYKDEVVVVS--GHGGGDKGGGRKAKLCFEEIKMGGRLSE 180
                 KPA TM      KRK+K+ V   +         GGG + KLC E++KMG RLSE
Sbjct: 238 -----IKPAATM------KRKHKEVVAATTTTAAAASAAGGGGRRKLCVEDVKMGRRLSE 295

Query: 181 ISSSYQRVFPQDEREAAI 190
           ISS+YQRVFPQDEREAAI
Sbjct: 298 ISSTYQRVFPQDEREAAI 295

[Close]

BLAST of IVF0011019 vs. TAIR 10
Match: AT5G56860.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 106.3 bits (264), Expect = 2.8e-23
Identity = 76/188 (40.43%), Postives = 100/188 (53.19%), Query Frame = 0


Query: 38  TNKRTSAT------TLHEGG-----AIIRTCSDCNTTKTPLWRSGPRGPKSLCNACGIRQ 97
           T K T+AT      T++E G      +IR CSDCNTTKTPLWRSGPRGPKSLCNACGIRQ
Sbjct: 202 TRKTTAATTENRYNTINENGYSNNNGVIRVCSDCNTTKTPLWRSGPRGPKSLCNACGIRQ 261

Query: 98  RKARRAMAEAAAAATNGGAVV------LKTNKAVQHKIT----------TKPATTMTTTT 157
           RKARRA   AAAAA +    V      L   K +Q+K            + P        
Sbjct: 262 RKARRAAMAAAAAAGDQEVAVAPRVQQLPLKKKLQNKKKRSNGGEKYNHSPPMVAKAKKC 321

Query: 158 ALKRKYKDEVVVVSGHGGGDKGGGRKA--------KLCFEEIKMGGRLSEISSSYQRVFP 191
            +K + + E+   +  G  +      +        K CF+++ +   +   SS+YQ+VFP
Sbjct: 322 KIKEEEEKEMEAETVAGDSEISKSTTSSNSSISSNKFCFDDLTI---MLSKSSAYQQVFP 381

[Close]

BLAST of IVF0011019 vs. TAIR 10
Match: AT4G26150.1 (cytokinin-responsive gata factor 1 )

HSP 1 Score: 97.1 bits (240), Expect = 1.7e-20
Identity = 73/176 (41.48%), Postives = 94/176 (53.41%), Query Frame = 0


Query: 31  SPSSIEQTNKRTSATTL-------HEGGAIIRTCSDCNTTKTPLWRSGPRGPKSLCNACG 90
           S SS + TN   S+          +    +IR CSDCNTTKTPLWRSGPRGPKSLCNACG
Sbjct: 168 SDSSKQHTNNDQSSNLSNSERQNGYNNDCVIRICSDCNTTKTPLWRSGPRGPKSLCNACG 227

Query: 91  IRQRKARR-AMAEAAAAATNG-GAVVLKTNKAVQHKITTKPATTMT----TTTALKRKYK 150
           IRQRKARR AMA A A A +G    V+K     ++KI+      ++         KR   
Sbjct: 228 IRQRKARRAAMATATATAVSGVSPPVMKKKMQNKNKISNGVYKILSPLPLKVNTCKRMIT 287

Query: 151 DEVVVVSGHGGGDKGG---GRKAKLCFEEIKMGGRLSEISSSYQRVFPQDEREAAI 191
            E   ++                 + F+++ +   L   SS+YQ+VFPQDE+EAAI
Sbjct: 288 LEETALAEDLETQSNSTMLSSSDNIYFDDLAL---LLSKSSAYQQVFPQDEKEAAI 340

[Close]

BLAST of IVF0011019 vs. TAIR 10
Match: AT5G26930.1 (GATA transcription factor 23 )

HSP 1 Score: 72.0 bits (175), Expect = 5.8e-13
Identity = 31/46 (67.39%), Postives = 35/46 (76.09%), Query Frame = 0


Query: 47 LHEGGAIIRTCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRA 93
          + E    IR CS+C TTKTP+WR GP GPKSLCNACGIR RK RR+
Sbjct: 18 MKEEKGTIRCCSECKTTKTPMWRGGPTGPKSLCNACGIRHRKQRRS 63

[Close]

BLAST of IVF0011019 vs. TAIR 10
Match: AT5G49300.1 (GATA transcription factor 16 )

HSP 1 Score: 69.7 bits (169), Expect = 2.9e-12
Identity = 30/41 (73.17%), Postives = 33/41 (80.49%), Query Frame = 0


Query: 55 RTCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAE 96
          +TC+DC T+KTPLWR GP GPKSLCNACGIR RK RR   E
Sbjct: 36 KTCADCGTSKTPLWRGGPVGPKSLCNACGIRNRKKRRGGTE 76

[Close]

BLAST of IVF0011019 vs. TAIR 10
Match: AT4G36620.1 (GATA transcription factor 19 )

HSP 1 Score: 68.9 bits (167), Expect = 4.9e-12
Identity = 30/53 (56.60%), Postives = 40/53 (75.47%), Query Frame = 0


Query: 53  IIRTCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAAATNGGA 106
           + R C++C+TT TPLWR+GPRGPKSLCNACGIR +K  R  + A  + + GG+
Sbjct: 73  LARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRASTARNSTSGGGS 125

The following BLAST results are available for this feature:

BLAST of IVF0011019 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5HZ36	3.9e-22	40.43	GATA transcription factor 21 OS=Arabidopsis thaliana OX=3702 GN=GATA21 PE=1 SV=2	[more]
Q9SZI6	2.4e-19	41.48	Putative GATA transcription factor 22 OS=Arabidopsis thaliana OX=3702 GN=GATA22 ...	[more]
Q6YW48	3.1e-19	56.52	Protein CYTOKININ-RESPONSIVE GATA TRANSCRIPTION FACTOR 1 OS=Oryza sativa subsp. ...	[more]
Q8LC59	8.2e-12	67.39	GATA transcription factor 23 OS=Arabidopsis thaliana OX=3702 GN=GATA23 PE=2 SV=2	[more]
Q9FJ10	4.1e-11	73.17	GATA transcription factor 16 OS=Arabidopsis thaliana OX=3702 GN=GATA16 PE=2 SV=1	[more]

BLAST of IVF0011019 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BPL1	2.0e-98	100.00	GATA transcription factor 21 OS=Cucumis melo OX=3656 GN=LOC103492321 PE=4 SV=1	[more]
A0A0A0LZE4	4.4e-77	86.84	GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G587970 P...	[more]
A0A6J1ELP1	2.1e-50	66.50	GATA transcription factor 21-like OS=Cucurbita moschata OX=3662 GN=LOC111433707 ...	[more]
A0A6J1HT96	1.5e-48	65.13	GATA transcription factor 21-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1HXZ7	1.5e-48	65.13	GATA transcription factor 21-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]

BLAST of IVF0011019 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008450852.1	1.27e-124	100.00	PREDICTED: GATA transcription factor 21 [Cucumis melo]	[more]
XP_004135818.1	3.59e-97	86.84	putative GATA transcription factor 22 [Cucumis sativus] >KGN66237.1 hypothetical...	[more]
XP_038878562.1	3.74e-83	80.51	GATA transcription factor 21 [Benincasa hispida]	[more]
XP_023530322.1	4.69e-65	67.53	GATA transcription factor 21-like [Cucurbita pepo subsp. pepo]	[more]
KAG6588037.1	1.71e-63	67.17	GATA transcription factor 21, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]

BLAST of IVF0011019 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G56860.1	2.8e-23	40.43	GATA type zinc finger transcription factor family protein	[more]
AT4G26150.1	1.7e-20	41.48	cytokinin-responsive gata factor 1	[more]
AT5G26930.1	5.8e-13	67.39	GATA transcription factor 23	[more]
AT5G49300.1	2.9e-12	73.17	GATA transcription factor 16	[more]
AT4G36620.1	4.9e-12	56.60	GATA transcription factor 19	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000679	Zinc finger, GATA-type	SMART	SM00401	GATA_3	coord: 51..102 e-value: 1.0E-19 score: 81.5
IPR000679	Zinc finger, GATA-type	PFAM	PF00320	GATA	coord: 57..90 e-value: 2.4E-17 score: 62.2
IPR000679	Zinc finger, GATA-type	PROSITE	PS00344	GATA_ZN_FINGER_1	coord: 57..82
IPR000679	Zinc finger, GATA-type	PROSITE	PS50114	GATA_ZN_FINGER_2	coord: 55..87 score: 12.650496
IPR000679	Zinc finger, GATA-type	CDD	cd00202	ZnF_GATA	coord: 56..86 e-value: 1.07385E-11 score: 55.4566
IPR013088	Zinc finger, NHR/GATA-type	GENE3D	3.30.50.10		coord: 53..96 e-value: 2.4E-15 score: 57.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..47
None	No IPR available	PANTHER	PTHR47255	GATA TRANSCRIPTION FACTOR 22-RELATED	coord: 21..190
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 52..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0011019.1	IVF0011019.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding