IVF0011003 (gene) Melon (IVF77) v1

Overview


Name	IVF0011003
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Pentatricopeptide repeat-containing protein
Location	tig00001378: 3844 .. 5356 (+)
RNA-Seq Expression	IVF0011003
Synteny	IVF0011003

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGGGCTCTACCGGCGAACTTGGCAAGCTCTGACGTTCAGAAGTCAACCCTTCTTCAGCGAACGGAGGTCTGGTAAGTATCATCGCGATTCGTACGATTTCATGAAATTATTGGGGCATTGCAGAACCATTAGAAGCGTTCAGGAACTACATGCCCAGATTCTCGTTGAGGGTCTTGATCAAAATGGATTCTTAGCCACGAAACTAATCGGCAAATACGTTGAGCTTGGTGAAGGTGAATCGAAAATGGGAACTGCACGGAAGGTGTTCGATAGATTGCTTCAAAGAGATGTGTTTTTGTGGAATGTGGTGATACAAGGATATGCGAGTTTCGGTCCGTTTGTTGAAGCTCTAAACCTGTTTGACGAAATGCGAGTTAGTGGAGAACCCACAAATCGCTATACATTTCCTTTTGTGTTGAAGGCATGTGGCGCACTGAAGAACAGTGACAAGGGTGAGATTGTTCATGGATACGTTGTGAAATGTGGGTTGGACTTGGATTTGTTTGTGGGTAATGCTCTGATCTCATGTTATTCTAAGTGTCAAGACGTTGAAACTGCTCGTAAAGTGTTTGATGATATGTCTCTAAGAGACACCGTAAGTTGGAACTCCATGATTGTTGGTTATACTTTGAATGAGAGAGAGGATGATGCTATAATGTTTTTTCATGCATGCTGCATAACCAAGCTGATTGCTTGCCTGATGATGCAACACTTGTTGCGATTCTGCCTGCTTGTGCTACAAAATCTGCTTCCAAGTTGGCTTTTGGGTTCATTCCTATATTATAAAAACAGGAATGGAAGTTGGGGCTTCCCTGGGCAGTTGCCTTATTTCTATGTATGGTAACTGTGGTCATATAAACATTGCAAGAGATGTTTTCAACCGAATCGACAACAAAAACGTTATCGTTTGGAGTGCAATCATAAGGTGTTATGGAATGCATGGTCTTGCAGATGAAGCATTGAACATGTTCAGAAGATTGGAAGAAGTTGGTGTTAAACCAGATGGCCTGATCTTCCTGAATTTGTTGTCGGCATGTAGTCACGCAGGGCTCGTTGCAAAAGGACGCGAGATATACAAAAAAATGGAGGCTTACGGTTTGGAGAGGAACGATAAACACTATGCGTGCATGGTGGATCTCTTAGCGAGGGCTGGTTTCTTAGAACAAGCAGCAGAGTTCATCGAAGCGATGCCCGTGCAGGCAGGAAAAGATGTATATGGTGCATTGTTTGGTGCTTGTAGGATACATAATAACCTAGAGCTAGCTAAAGAAGTGGGGGAGAAGTTGTTTATCTTAGATCCCGAAAATGCCGGTCGGTATATGATCTTAGCTAGTATGTATGAAGATGCAGGGCAGTGGGAAGATGCTGCTAAAGTAAGGAAGTTGCTGAGGGATAGGAATATTAAGAAGCCAGCCGGTTGCAGTTCAATAGAGGTAGATAGGATCCATCATGTGTTTGGGAAGAAGGATGAAACTCATCCCTTCACAGAAGAGATTTTGACACGATAG

mRNA sequence

ATGAATGGGCTCTACCGGCGAACTTGGCAAGCTCTGACGTTCAGAAGTCAACCCTTCTTCAGCGAACGGAGGTCTGGTAAGTATCATCGCGATTCGTACGATTTCATGAAATTATTGGGGCATTGCAGAACCATTAGAAGCGTTCAGGAACTACATGCCCAGATTCTCGTTGAGGGTCTTGATCAAAATGGATTCTTAGCCACGAAACTAATCGGCAAATACGTTGAGCTTGGTGAAGGTGAATCGAAAATGGGAACTGCACGGAAGGTGTTCGATAGATTGCTTCAAAGAGATGTGTTTTTGTGGAATGTGGTGATACAAGGATATGCGAGTTTCGGTCCGTTTGTTGAAGCTCTAAACCTGTTTGACGAAATGCGAGTTAGTGGAGAACCCACAAATCGCTATACATTTCCTTTTGTGTTGAAGGCATGTGGCGCACTGAAGAACAGTGACAAGGGTGAGATTGTTCATGGATACGTTGTGAAATGTGGGTTGGACTTGGATTTGTTTGTGGGTAATGCTCTGATCTCATGTTATTCTAAGTGTCAAGACGTTGAAACTGCTCGTAAAGTGTTTGATGATATGTCTCTAAGAGACACCGTAAGTTGGAACTCCATGATTGTTGGTTATACTTTGAATGAGAGAGAGGATGATGCTATAATGTTTTTTCATGCATTTGGCTTTTGGGTTCATTCCTATATTATAAAAACAGGAATGGAAGTTGGGGCTTCCCTGGGCAGTTGCCTTATTTCTATGTATGGTAACTGTGGTCATATAAACATTGCAAGAGATGTTTTCAACCGAATCGACAACAAAAACGTTATCGTTTGGAGTGCAATCATAAGGTGTTATGGAATGCATGGTCTTGCAGATGAAGCATTGAACATGTTCAGAAGATTGGAAGAAGTTGGTGTTAAACCAGATGGCCTGATCTTCCTGAATTTGTTGTCGGCATGTAGTCACGCAGGGCTCGTTGCAAAAGGACGCGAGATATACAAAAAAATGGAGGCTTACGGTTTGGAGAGGAACGATAAACACTATGCGTGCATGGTGGATCTCTTAGCGAGGGCTGGTTTCTTAGAACAAGCAGCAGAGTTCATCGAAGCGATGCCCGTGCAGGCAGGAAAAGATGTATATGGTGCATTGTTTGGTGCTTGTAGGATACATAATAACCTAGAGCTAGCTAAAGAAGTGGGGGAGAAGTTGTTTATCTTAGATCCCGAAAATGCCGGTCGGTATATGATCTTAGCTAGTATGTATGAAGATGCAGGGCAGTGGGAAGATGCTGCTAAAGTAAGGAAGTTGCTGAGGGATAGGAATATTAAGAAGCCAGCCGGTTGCAGTTCAATAGAGGTAGATAGGATCCATCATGTGTTTGGGAAGAAGGATGAAACTCATCCCTTCACAGAAGAGATTTTGACACGATAG

Coding sequence (CDS)

ATGAATGGGCTCTACCGGCGAACTTGGCAAGCTCTGACGTTCAGAAGTCAACCCTTCTTCAGCGAACGGAGGTCTGGTAAGTATCATCGCGATTCGTACGATTTCATGAAATTATTGGGGCATTGCAGAACCATTAGAAGCGTTCAGGAACTACATGCCCAGATTCTCGTTGAGGGTCTTGATCAAAATGGATTCTTAGCCACGAAACTAATCGGCAAATACGTTGAGCTTGGTGAAGGTGAATCGAAAATGGGAACTGCACGGAAGGTGTTCGATAGATTGCTTCAAAGAGATGTGTTTTTGTGGAATGTGGTGATACAAGGATATGCGAGTTTCGGTCCGTTTGTTGAAGCTCTAAACCTGTTTGACGAAATGCGAGTTAGTGGAGAACCCACAAATCGCTATACATTTCCTTTTGTGTTGAAGGCATGTGGCGCACTGAAGAACAGTGACAAGGGTGAGATTGTTCATGGATACGTTGTGAAATGTGGGTTGGACTTGGATTTGTTTGTGGGTAATGCTCTGATCTCATGTTATTCTAAGTGTCAAGACGTTGAAACTGCTCGTAAAGTGTTTGATGATATGTCTCTAAGAGACACCGTAAGTTGGAACTCCATGATTGTTGGTTATACTTTGAATGAGAGAGAGGATGATGCTATAATGTTTTTTCATGCATTTGGCTTTTGGGTTCATTCCTATATTATAAAAACAGGAATGGAAGTTGGGGCTTCCCTGGGCAGTTGCCTTATTTCTATGTATGGTAACTGTGGTCATATAAACATTGCAAGAGATGTTTTCAACCGAATCGACAACAAAAACGTTATCGTTTGGAGTGCAATCATAAGGTGTTATGGAATGCATGGTCTTGCAGATGAAGCATTGAACATGTTCAGAAGATTGGAAGAAGTTGGTGTTAAACCAGATGGCCTGATCTTCCTGAATTTGTTGTCGGCATGTAGTCACGCAGGGCTCGTTGCAAAAGGACGCGAGATATACAAAAAAATGGAGGCTTACGGTTTGGAGAGGAACGATAAACACTATGCGTGCATGGTGGATCTCTTAGCGAGGGCTGGTTTCTTAGAACAAGCAGCAGAGTTCATCGAAGCGATGCCCGTGCAGGCAGGAAAAGATGTATATGGTGCATTGTTTGGTGCTTGTAGGATACATAATAACCTAGAGCTAGCTAAAGAAGTGGGGGAGAAGTTGTTTATCTTAGATCCCGAAAATGCCGGTCGGTATATGATCTTAGCTAGTATGTATGAAGATGCAGGGCAGTGGGAAGATGCTGCTAAAGTAAGGAAGTTGCTGAGGGATAGGAATATTAAGAAGCCAGCCGGTTGCAGTTCAATAGAGGTAGATAGGATCCATCATGTGTTTGGGAAGAAGGATGAAACTCATCCCTTCACAGAAGAGATTTTGACACGATAG

Protein sequence

MNGLYRRTWQALTFRSQPFFSERRSGKYHRDSYDFMKLLGHCRTIRSVQELHAQILVEGLDQNGFLATKLIGKYVELGEGESKMGTARKVFDRLLQRDVFLWNVVIQGYASFGPFVEALNLFDEMRVSGEPTNRYTFPFVLKACGALKNSDKGEIVHGYVVKCGLDLDLFVGNALISCYSKCQDVETARKVFDDMSLRDTVSWNSMIVGYTLNEREDDAIMFFHAFGFWVHSYIIKTGMEVGASLGSCLISMYGNCGHINIARDVFNRIDNKNVIVWSAIIRCYGMHGLADEALNMFRRLEEVGVKPDGLIFLNLLSACSHAGLVAKGREIYKKMEAYGLERNDKHYACMVDLLARAGFLEQAAEFIEAMPVQAGKDVYGALFGACRIHNNLELAKEVGEKLFILDPENAGRYMILASMYEDAGQWEDAAKVRKLLRDRNIKKPAGCSSIEVDRIHHVFGKKDETHPFTEEILTR

Homology

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BLAST of IVF0011003 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 7.8e-88
Identity = 169/505 (33.47%), Postives = 274/505 (54.26%), Query Frame = 0


Query: 31  DSYDFMKLLGHCRTIRSV---QELHAQILVEGLDQNGFLATKLIGKYVELGEGESKMGTA 90
           + Y F  L+     + S+   Q LH   +   +  + F+A  LI  Y   G+    + +A
Sbjct: 130 NKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGD----LDSA 189

Query: 91  RKVFDRLLQRDVFLWNVVIQGYASFGPFVEALNLFDEMRVSGEPTNRYTFPFVLKACGAL 150
            KVF  + ++DV  WN +I G+   G   +AL LF +M       +  T   VL AC  +
Sbjct: 190 CKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKI 249

Query: 151 KNSDKGEIVHGYVVKCGLDLDLFVGNALISCYSKCQDVETARKVFDDMSLRDTVSWNSMI 210
           +N + G  V  Y+ +  ++++L + NA++  Y+KC  +E A+++FD M  +D V+W +M+
Sbjct: 250 RNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTML 309

Query: 211 VGYTLNE-------------------------------REDDAIMFFH------------ 270
            GY ++E                               + ++A++ FH            
Sbjct: 310 DGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQ 369

Query: 271 ----------------AFGFWVHSYIIKTGMEVGASLGSCLISMYGNCGHINIARDVFNR 330
                             G W+HSYI K G+ +   + S LI MY  CG +  +R+VFN 
Sbjct: 370 ITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNS 429

Query: 331 IDNKNVIVWSAIIRCYGMHGLADEALNMFRRLEEVGVKPDGLIFLNLLSACSHAGLVAKG 390
           ++ ++V VWSA+I    MHG  +EA++MF +++E  VKP+G+ F N+  ACSH GLV + 
Sbjct: 430 VEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEA 489

Query: 391 REIYKKMEA-YGLERNDKHYACMVDLLARAGFLEQAAEFIEAMPVQAGKDVYGALFGACR 450
             ++ +ME+ YG+   +KHYAC+VD+L R+G+LE+A +FIEAMP+     V+GAL GAC+
Sbjct: 490 ESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACK 549

Query: 451 IHNNLELAKEVGEKLFILDPENAGRYMILASMYEDAGQWEDAAKVRKLLRDRNIKKPAGC 473
           IH NL LA+    +L  L+P N G +++L+++Y   G+WE+ +++RK +R   +KK  GC
Sbjct: 550 IHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGC 609

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BLAST of IVF0011003 vs. ExPASy Swiss-Prot
Match: Q7Y211 (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H81 PE=2 SV=2)

HSP 1 Score: 314.3 bits (804), Expect = 2.3e-84
Identity = 170/474 (35.86%), Postives = 259/474 (54.64%), Query Frame = 0


Query: 41  HCRTIRSVQELHAQILVEG-LDQNGFLATKLIGKYVELGEGESKMGTARKVFDRLLQRDV 100
           H   +R+ +ELHA  L  G LD+N F+ + L+  Y        ++ + R+VFD +  R +
Sbjct: 314 HLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNC----KQVLSGRRVFDGMFDRKI 373

Query: 101 FLWNVVIQGYASFGPFVEALNLFDEMRVS-GEPTNRYTFPFVLKACGALKNSDKGEIVHG 160
            LWN +I GY+      EAL LF  M  S G   N  T   V+ AC       + E +HG
Sbjct: 374 GLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHG 433

Query: 161 YVVKCGLDLDLFVGNALISCYSKCQDVETARKVFDDMSLRDTVSWNSMIVGYTLNEREDD 220
           +VVK GLD D FV N L+  YS+   ++ A ++F  M  RD V+WN+MI GY  +E  +D
Sbjct: 434 FVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHED 493

Query: 221 AIMFFH--------------------------------------AFGFWVHSYIIKTGME 280
           A++  H                                      A G  +H+Y IK  + 
Sbjct: 494 ALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLA 553

Query: 281 VGASLGSCLISMYGNCGHINIARDVFNRIDNKNVIVWSAIIRCYGMHGLADEALNMFRRL 340
              ++GS L+ MY  CG + ++R VF++I  KNVI W+ II  YGMHG   EA+++ R +
Sbjct: 554 TDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMM 613

Query: 341 EEVGVKPDGLIFLNLLSACSHAGLVAKGREIYKKMEA-YGLERNDKHYACMVDLLARAGF 400
              GVKP+ + F+++ +ACSH+G+V +G  I+  M+  YG+E +  HYAC+VDLL RAG 
Sbjct: 614 MVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGR 673

Query: 401 LEQAAEFIEAMPVQAGK-DVYGALFGACRIHNNLELAKEVGEKLFILDPENAGRYMILAS 460
           +++A + +  MP    K   + +L GA RIHNNLE+ +   + L  L+P  A  Y++LA+
Sbjct: 674 IKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLAN 733

Query: 461 MYEDAGQWEDAAKVRKLLRDRNIKKPAGCSSIEVDRIHHVFGKKDETHPFTEEI 473
           +Y  AG W+ A +VR+ ++++ ++K  GCS IE     H F   D +HP +E++
Sbjct: 734 IYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKL 783

[Close]

BLAST of IVF0011003 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.2e-83
Identity = 170/502 (33.86%), Postives = 266/502 (52.99%), Query Frame = 0


Query: 31  DSYDFMKLLGHC---RTIRSVQELHAQILVEGLDQNGFLATKLIGKYVELG--------- 90
           +SY F  +L  C   +  +  Q++H  +L  G D + ++ T LI  YV+ G         
Sbjct: 133 NSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVF 192

Query: 91  ---------------EGESKMG---TARKVFDRLLQRDVFLWNVVIQGYASFGPFVEALN 150
                          +G +  G    A+K+FD +  +DV  WN +I GYA  G + EAL 
Sbjct: 193 DKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALE 252

Query: 151 LFDEMRVSGEPTNRYTFPFVLKACGALKNSDKGEIVHGYVVKCGLDLDLFVGNALISCYS 210
           LF +M  +    +  T   V+ AC    + + G  VH ++   G   +L + NALI  YS
Sbjct: 253 LFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYS 312

Query: 211 KCQDVETARKVFDDMSLRDTVSWNSMIVGYTLNEREDDAIMFFHA--------------- 270
           KC ++ETA  +F+ +  +D +SWN++I GYT      +A++ F                 
Sbjct: 313 KCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLS 372

Query: 271 ------------FGFWVHSYIIK--TGMEVGASLGSCLISMYGNCGHINIARDVFNRIDN 330
                        G W+H YI K   G+   +SL + LI MY  CG I  A  VFN I +
Sbjct: 373 ILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILH 432

Query: 331 KNVIVWSAIIRCYGMHGLADEALNMFRRLEEVGVKPDGLIFLNLLSACSHAGLVAKGREI 390
           K++  W+A+I  + MHG AD + ++F R+ ++G++PD + F+ LLSACSH+G++  GR I
Sbjct: 433 KSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492

Query: 391 YKKM-EAYGLERNDKHYACMVDLLARAGFLEQAAEFIEAMPVQAGKDVYGALFGACRIHN 450
           ++ M + Y +    +HY CM+DLL  +G  ++A E I  M ++    ++ +L  AC++H 
Sbjct: 493 FRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHG 552

Query: 451 NLELAKEVGEKLFILDPENAGRYMILASMYEDAGQWEDAAKVRKLLRDRNIKKPAGCSSI 473
           N+EL +   E L  ++PEN G Y++L+++Y  AG+W + AK R LL D+ +KK  GCSSI
Sbjct: 553 NVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSI 612

[Close]

BLAST of IVF0011003 vs. ExPASy Swiss-Prot
Match: Q9STF3 (Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR2 PE=2 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 2.0e-83
Identity = 160/478 (33.47%), Postives = 271/478 (56.69%), Query Frame = 0


Query: 30  RDSYDFMKL-LGHCRTIRSVQELHAQILVEGLDQNGFLATKLIGKYVELGEGESKMGTAR 89
           + +Y+ + L  GH  ++     +H  IL  G DQ+ FLATKLIG Y +LG     +  AR
Sbjct: 77  QQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLG----SVDYAR 136

Query: 90  KVFDRLLQRDVFLWNVVIQGYASFGPFVEALNLFDEMRVSGEPTNRYTFPFVLKACGA-- 149
           KVFD+  +R +++WN + +     G   E L L+ +M   G  ++R+T+ +VLKAC A  
Sbjct: 137 KVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASE 196

Query: 150 --LKNSDKGEIVHGYVVKCGLDLDLFVGNALISCYSKCQDVETARKVFDDMSLRDTVSWN 209
             + +  KG+ +H ++ + G    +++   L+  Y++   V+ A  VF  M +R+ VSW+
Sbjct: 197 CTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWS 256

Query: 210 SMIVGYTLNEREDDAIMFFHAF-----------------------------GFWVHSYII 269
           +MI  Y  N +  +A+  F                                G  +H YI+
Sbjct: 257 AMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYIL 316

Query: 270 KTGMEVGASLGSCLISMYGNCGHINIARDVFNRIDNKNVIVWSAIIRCYGMHGLADEALN 329
           + G++    + S L++MYG CG + + + VF+R+ +++V+ W+++I  YG+HG   +A+ 
Sbjct: 317 RRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQ 376

Query: 330 MFRRLEEVGVKPDGLIFLNLLSACSHAGLVAKGREIYKKM-EAYGLERNDKHYACMVDLL 389
           +F  +   G  P  + F+++L ACSH GLV +G+ +++ M   +G++   +HYACMVDLL
Sbjct: 377 IFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLL 436

Query: 390 ARAGFLEQAAEFIEAMPVQAGKDVYGALFGACRIHNNLELAKEVGEKLFILDPENAGRYM 449
            RA  L++AA+ ++ M  + G  V+G+L G+CRIH N+ELA+    +LF L+P+NAG Y+
Sbjct: 437 GRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYV 496

Query: 450 ILASMYEDAGQWEDAAKVRKLLRDRNIKKPAGCSSIEVDRIHHVFGKKDETHPFTEEI 473
           +LA +Y +A  W++  +V+KLL  R ++K  G   +EV R  + F   DE +P  E+I
Sbjct: 497 LLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQI 550

[Close]

BLAST of IVF0011003 vs. ExPASy Swiss-Prot
Match: P0C899 (Putative pentatricopeptide repeat-containing protein At3g49142 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H77 PE=3 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 2.0e-83
Identity = 174/524 (33.21%), Postives = 268/524 (51.15%), Query Frame = 0


Query: 45  IRSVQELHAQILVEGLDQNGFLATKLIGKYVELGEGESKMGTARKVFDRLLQRDVFLWNV 104
           IR+++ +H++I++E L  N  L  KL+  Y  L +    + +ARKVFD + +R+V + NV
Sbjct: 55  IRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKD----VASARKVFDEIPERNVIIINV 114

Query: 105 VIQGYASFGPFVEALNLFDEMRVSGEPTNRYTFPFVLKACGALKNSDKGEIVHGYVVKCG 164
           +I+ Y + G + E + +F  M       + YTFP VLKAC        G  +HG   K G
Sbjct: 115 MIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVG 174

Query: 165 LDLDLFVGNALISCYSKCQDVETARKVFDDMSLRDTVSWNSMIVGYTLNEREDDAI---- 224
           L   LFVGN L+S Y KC  +  AR V D+MS RD VSWNS++VGY  N+R DDA+    
Sbjct: 175 LSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCR 234

Query: 225 ----------------------------------MFFH---------------------- 284
                                             MFF                       
Sbjct: 235 EMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMP 294

Query: 285 -----------------------------------AFGFWVHSYIIKTGMEVGASLGSCL 344
                                              + G  +H YI +  +     L + L
Sbjct: 295 VEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENAL 354

Query: 345 ISMYGNCGHINIARDVFNRIDNKNVIVWSAIIRCYGMHGLADEALNMFRRLEEVGVKPDG 404
           I MY  CG +  ARDVF  + +++V+ W+A+I  YG  G   +A+ +F +L++ G+ PD 
Sbjct: 355 IDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDS 414

Query: 405 LIFLNLLSACSHAGLVAKGREIYKKM-EAYGLERNDKHYACMVDLLARAGFLEQAAEFIE 464
           + F+  L+ACSHAGL+ +GR  +K M + Y +    +H ACMVDLL RAG +++A  FI+
Sbjct: 415 IAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQ 474

Query: 465 AMPVQAGKDVYGALFGACRIHNNLELAKEVGEKLFILDPENAGRYMILASMYEDAGQWED 473
            M ++  + V+GAL GACR+H++ ++     +KLF L PE +G Y++L+++Y  AG+WE+
Sbjct: 475 DMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEE 534

[Close]

BLAST of IVF0011003 vs. ExPASy TrEMBL
Match: A0A5A7UCB1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00430 PE=4 SV=1)

HSP 1 Score: 958.0 bits (2475), Expect = 1.5e-275
Identity = 471/501 (94.01%), Postives = 471/501 (94.01%), Query Frame = 0


Query: 1   MNGLYRRTWQALTFRSQPFFSERRSGKYHRDSYDFMKLLGHCRTIRSVQELHAQILVEGL 60
           MNGLYRRTWQALTFRSQPFFSERRSGKYHRDSYDFMKLLGHCRTIRSVQELHAQILVEGL
Sbjct: 1   MNGLYRRTWQALTFRSQPFFSERRSGKYHRDSYDFMKLLGHCRTIRSVQELHAQILVEGL 60

Query: 61  DQNGFLATKLIGKYVELGEGESKMGTARKVFDRLLQRDVFLWNVVIQGYASFGPFVEALN 120
           DQNGFLATKLIGKYVELGEGESKMGTARKVFDRLLQRDVFLWNVVIQGYASFGPFVEALN
Sbjct: 61  DQNGFLATKLIGKYVELGEGESKMGTARKVFDRLLQRDVFLWNVVIQGYASFGPFVEALN 120

Query: 121 LFDEMRVSGEPTNRYTFPFVLKACGALKNSDKGEIVHGYVVKCGLDLDLFVGNALISCYS 180
           LFDEMRVSGEPTNRYTFPFVLKACGALKNSDKGEIVHGYVVKCGLDLDLFVGNALISCYS
Sbjct: 121 LFDEMRVSGEPTNRYTFPFVLKACGALKNSDKGEIVHGYVVKCGLDLDLFVGNALISCYS 180

Query: 181 KCQDVETARKVFDDMSLRDTVSWNSMIVGYTLNEREDDAIMFFHAF-------------- 240
           KCQDVETARKVFDDMSLRDTVSWNSMIVGYTLNEREDDAIMFFHA               
Sbjct: 181 KCQDVETARKVFDDMSLRDTVSWNSMIVGYTLNEREDDAIMFFHAMLHNQADCLPDDATL 240

Query: 241 ---------------GFWVHSYIIKTGMEVGASLGSCLISMYGNCGHINIARDVFNRIDN 300
                          GFWVHSYIIKTGMEVGASLGSCLISMYGNCGHINIARDVFNRIDN
Sbjct: 241 VAILPACATKSASQVGFWVHSYIIKTGMEVGASLGSCLISMYGNCGHINIARDVFNRIDN 300

Query: 301 KNVIVWSAIIRCYGMHGLADEALNMFRRLEEVGVKPDGLIFLNLLSACSHAGLVAKGREI 360
           KNVIVWSAIIRCYGMHGLADEALNMFRRLEEVGVKPDGLIFLNLLSACSHAGLVAKGREI
Sbjct: 301 KNVIVWSAIIRCYGMHGLADEALNMFRRLEEVGVKPDGLIFLNLLSACSHAGLVAKGREI 360

Query: 361 YKKMEAYGLERNDKHYACMVDLLARAGFLEQAAEFIEAMPVQAGKDVYGALFGACRIHNN 420
           YKKMEAYGLERNDKHYACMVDLLARAGFLEQAAEFIEAMPVQAGKDVYGALFGACRIHNN
Sbjct: 361 YKKMEAYGLERNDKHYACMVDLLARAGFLEQAAEFIEAMPVQAGKDVYGALFGACRIHNN 420

Query: 421 LELAKEVGEKLFILDPENAGRYMILASMYEDAGQWEDAAKVRKLLRDRNIKKPAGCSSIE 473
           LELAKEVGEKLFILDPENAGRYMILASMYEDAGQWEDAAKVRKLLRDRNIKKPAGCSSIE
Sbjct: 421 LELAKEVGEKLFILDPENAGRYMILASMYEDAGQWEDAAKVRKLLRDRNIKKPAGCSSIE 480

[Close]

BLAST of IVF0011003 vs. ExPASy TrEMBL
Match: A0A1S3BMB7 (pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103491107 PE=4 SV=1)

HSP 1 Score: 958.0 bits (2475), Expect = 1.5e-275
Identity = 471/501 (94.01%), Postives = 471/501 (94.01%), Query Frame = 0


Query: 1   MNGLYRRTWQALTFRSQPFFSERRSGKYHRDSYDFMKLLGHCRTIRSVQELHAQILVEGL 60
           MNGLYRRTWQALTFRSQPFFSERRSGKYHRDSYDFMKLLGHCRTIRSVQELHAQILVEGL
Sbjct: 1   MNGLYRRTWQALTFRSQPFFSERRSGKYHRDSYDFMKLLGHCRTIRSVQELHAQILVEGL 60

Query: 61  DQNGFLATKLIGKYVELGEGESKMGTARKVFDRLLQRDVFLWNVVIQGYASFGPFVEALN 120
           DQNGFLATKLIGKYVELGEGESKMGTARKVFDRLLQRDVFLWNVVIQGYASFGPFVEALN
Sbjct: 61  DQNGFLATKLIGKYVELGEGESKMGTARKVFDRLLQRDVFLWNVVIQGYASFGPFVEALN 120

Query: 121 LFDEMRVSGEPTNRYTFPFVLKACGALKNSDKGEIVHGYVVKCGLDLDLFVGNALISCYS 180
           LFDEMRVSGEPTNRYTFPFVLKACGALKNSDKGEIVHGYVVKCGLDLDLFVGNALISCYS
Sbjct: 121 LFDEMRVSGEPTNRYTFPFVLKACGALKNSDKGEIVHGYVVKCGLDLDLFVGNALISCYS 180

Query: 181 KCQDVETARKVFDDMSLRDTVSWNSMIVGYTLNEREDDAIMFFHAF-------------- 240
           KCQDVETARKVFDDMSLRDTVSWNSMIVGYTLNEREDDAIMFFHA               
Sbjct: 181 KCQDVETARKVFDDMSLRDTVSWNSMIVGYTLNEREDDAIMFFHAMLHNQADCLPDDATL 240

Query: 241 ---------------GFWVHSYIIKTGMEVGASLGSCLISMYGNCGHINIARDVFNRIDN 300
                          GFWVHSYIIKTGMEVGASLGSCLISMYGNCGHINIARDVFNRIDN
Sbjct: 241 VAILPACATKSASQVGFWVHSYIIKTGMEVGASLGSCLISMYGNCGHINIARDVFNRIDN 300

Query: 301 KNVIVWSAIIRCYGMHGLADEALNMFRRLEEVGVKPDGLIFLNLLSACSHAGLVAKGREI 360
           KNVIVWSAIIRCYGMHGLADEALNMFRRLEEVGVKPDGLIFLNLLSACSHAGLVAKGREI
Sbjct: 301 KNVIVWSAIIRCYGMHGLADEALNMFRRLEEVGVKPDGLIFLNLLSACSHAGLVAKGREI 360

Query: 361 YKKMEAYGLERNDKHYACMVDLLARAGFLEQAAEFIEAMPVQAGKDVYGALFGACRIHNN 420
           YKKMEAYGLERNDKHYACMVDLLARAGFLEQAAEFIEAMPVQAGKDVYGALFGACRIHNN
Sbjct: 361 YKKMEAYGLERNDKHYACMVDLLARAGFLEQAAEFIEAMPVQAGKDVYGALFGACRIHNN 420

Query: 421 LELAKEVGEKLFILDPENAGRYMILASMYEDAGQWEDAAKVRKLLRDRNIKKPAGCSSIE 473
           LELAKEVGEKLFILDPENAGRYMILASMYEDAGQWEDAAKVRKLLRDRNIKKPAGCSSIE
Sbjct: 421 LELAKEVGEKLFILDPENAGRYMILASMYEDAGQWEDAAKVRKLLRDRNIKKPAGCSSIE 480

[Close]

BLAST of IVF0011003 vs. ExPASy TrEMBL
Match: A0A0A0L101 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G002500 PE=4 SV=1)

HSP 1 Score: 861.7 bits (2225), Expect = 1.5e-246
Identity = 419/501 (83.63%), Postives = 441/501 (88.02%), Query Frame = 0


Query: 1   MNGLYRRTWQALTFRSQPFFSERRSGKYHRDSYDFMKLLGHCRTIRSVQELHAQILVEGL 60
           MNGL RRTWQALTFR+QPFFSE   GKYHRDSY F+KLLGHCR+IRSVQELHAQILVEGL
Sbjct: 1   MNGLCRRTWQALTFRNQPFFSEWSFGKYHRDSYGFIKLLGHCRSIRSVQELHAQILVEGL 60

Query: 61  DQNGFLATKLIGKYVELGEGESKMGTARKVFDRLLQRDVFLWNVVIQGYASFGPFVEALN 120
           DQNGF+A KLIGKYVE  EGE KMGTARKVFD L++RDVF+WNVVIQGYAS GPFVEALN
Sbjct: 61  DQNGFVAAKLIGKYVEHDEGEVKMGTARKVFDTLVRRDVFVWNVVIQGYASLGPFVEALN 120

Query: 121 LFDEMRVSGEPTNRYTFPFVLKACGALKNSDKGEIVHGYVVKCGLDLDLFVGNALISCYS 180
           LFDEMRVSGEPTNRYTFPFVLKACGA+KNSDKGEIVHG+VVKCGLDLDLFVGNALI+ YS
Sbjct: 121 LFDEMRVSGEPTNRYTFPFVLKACGAMKNSDKGEIVHGHVVKCGLDLDLFVGNALIAFYS 180

Query: 181 KCQDVETARKVFDDMSLRDTVSWNSMIVGYTLNEREDDAIMFFHAF-------------- 240
           KCQDVETARKVFDDMSLRD VSWNSMIVGYTLN +ED+AIMFFHA               
Sbjct: 181 KCQDVETARKVFDDMSLRDIVSWNSMIVGYTLNGKEDEAIMFFHAMLHNQADCTPDSATL 240

Query: 241 ---------------GFWVHSYIIKTGMEVGASLGSCLISMYGNCGHINIARDVFNRIDN 300
                          GFWVHSY+IKTG+EVGA LGSCLI MYGNCGH+NIARDVF+RID+
Sbjct: 241 VAILPACATKSASQVGFWVHSYVIKTGIEVGAPLGSCLICMYGNCGHVNIARDVFDRIDD 300

Query: 301 KNVIVWSAIIRCYGMHGLADEALNMFRRLEEVGVKPDGLIFLNLLSACSHAGLVAKGREI 360
           KNVIVWSAIIRCYGMHG ADEA NMFRRLEE GVKPDGLIFLNLLSACSHAGLVAKG EI
Sbjct: 301 KNVIVWSAIIRCYGMHGFADEAFNMFRRLEEAGVKPDGLIFLNLLSACSHAGLVAKGHEI 360

Query: 361 YKKMEAYGLERNDKHYACMVDLLARAGFLEQAAEFIEAMPVQAGKDVYGALFGACRIHNN 420
           Y+KMEAYGLER D HYACMVDLL RAGFLEQA EFIE MPVQAGKDVYGAL GACRIHNN
Sbjct: 361 YEKMEAYGLERKDNHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGACRIHNN 420

Query: 421 LELAKEVGEKLFILDPENAGRYMILASMYEDAGQWEDAAKVRKLLRDRNIKKPAGCSSIE 473
           LELAKEVGEKLFILDPE A RY+ LA+MYEDAGQWEDAAK+RKLLRDRNI+KPAGCSSIE
Sbjct: 421 LELAKEVGEKLFILDPEKASRYVTLATMYEDAGQWEDAAKLRKLLRDRNIRKPAGCSSIE 480

[Close]

BLAST of IVF0011003 vs. ExPASy TrEMBL
Match: A0A6J1I919 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111470278 PE=4 SV=1)

HSP 1 Score: 797.0 bits (2057), Expect = 4.4e-227
Identity = 389/508 (76.57%), Postives = 429/508 (84.45%), Query Frame = 0


Query: 1   MNGLYRRTWQALTFRSQPFFSERRS-------GKYHRDSYDFMKLLGHCRTIRSVQELHA 60
           MNGLYRR  +AL  R QPFF   RS        +YHRDSYD+ KLL HCR+IRSVQELHA
Sbjct: 1   MNGLYRRYSRALVSRKQPFFRFLRSIFNDWSRREYHRDSYDYTKLLQHCRSIRSVQELHA 60

Query: 61  QILVEGLDQNGFLATKLIGKYVELGEGESKMGTARKVFDRLLQRDVFLWNVVIQGYASFG 120
           QI+VEG DQNGFLATKLIGKY E   GE KMG ARKVFDRLL++DVF+WNVVIQGYA++G
Sbjct: 61  QIVVEGHDQNGFLATKLIGKYAEY--GEEKMGIARKVFDRLLEKDVFVWNVVIQGYANWG 120

Query: 121 PFVEALNLFDEMRVSGEPTNRYTFPFVLKACGALKNSDKGEIVHGYVVKCGLDLDLFVGN 180
           PF EALNL+DEMRV GEPTNRYTFPFVLKACGA+KNS+KG+IVHG+V+KCGLDLDLFVGN
Sbjct: 121 PFAEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKNSEKGKIVHGHVLKCGLDLDLFVGN 180

Query: 181 ALISCYSKCQDVETARKVFDDMSLRDTVSWNSMIVGYTLNEREDDAIMFFHAF------- 240
           ALI+ YSKCQDVETARKVFD+MSLRD VSWNSMI GYTLN + D+AIM FHA        
Sbjct: 181 ALIAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMLFHAMLHNQTAC 240

Query: 241 ----------------------GFWVHSYIIKTGMEVGASLGSCLISMYGNCGHINIARD 300
                                 GFWVHSY+IKTGMEVGA LGSCLISMY NCGH+NIARD
Sbjct: 241 SPDNATLVGILPACVTKSASQVGFWVHSYVIKTGMEVGAPLGSCLISMYANCGHVNIARD 300

Query: 301 VFNRIDNKNVIVWSAIIRCYGMHGLADEALNMFRRLEEVGVKPDGLIFLNLLSACSHAGL 360
           VF+RI +KNVIVWSAIIR YGMHG ADEALNMF  LEEVG+KPDG+IFLNLLS CSHAGL
Sbjct: 301 VFDRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEVGLKPDGVIFLNLLSTCSHAGL 360

Query: 361 VAKGREIYKKMEAYGLERNDKHYACMVDLLARAGFLEQAAEFIEAMPVQAGKDVYGALFG 420
           V KGREIY+KMEAYG ER ++HYACMVDLL RAGFLEQA EFIE MPVQAGKDVYGAL G
Sbjct: 361 VEKGREIYEKMEAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLG 420

Query: 421 ACRIHNNLELAKEVGEKLFILDPENAGRYMILASMYEDAGQWEDAAKVRKLLRDRNIKKP 473
           ACRIHNN+ELAKEVG+KLF+LDPENAGRY+ILASMYEDAGQWEDAAK+RKLLRDRNI+KP
Sbjct: 421 ACRIHNNIELAKEVGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKP 480

[Close]

BLAST of IVF0011003 vs. ExPASy TrEMBL
Match: A0A6J1FMZ9 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111447289 PE=4 SV=1)

HSP 1 Score: 789.3 bits (2037), Expect = 9.2e-225
Identity = 383/508 (75.39%), Postives = 428/508 (84.25%), Query Frame = 0


Query: 1   MNGLYRRTWQALTFRSQPFFSERRS-------GKYHRDSYDFMKLLGHCRTIRSVQELHA 60
           MNGLYRR+ +AL  R++PFF   RS        +YHRDSYD+ KLL HCR+IRSV+ELHA
Sbjct: 1   MNGLYRRSSRALVSRNRPFFRFLRSIFNDWSRREYHRDSYDYTKLLQHCRSIRSVEELHA 60

Query: 61  QILVEGLDQNGFLATKLIGKYVELGEGESKMGTARKVFDRLLQRDVFLWNVVIQGYASFG 120
           QI+VEG DQNGFLATKLIGKY E   GE KM  ARKVFDRLL++DVF+WNVVIQGYA++G
Sbjct: 61  QIVVEGHDQNGFLATKLIGKYAEY--GEEKMEIARKVFDRLLEKDVFVWNVVIQGYANWG 120

Query: 121 PFVEALNLFDEMRVSGEPTNRYTFPFVLKACGALKNSDKGEIVHGYVVKCGLDLDLFVGN 180
           PF EALNL+DEMRV GEPTNRYTFPFVLKACGA+KN DKG+IVHG+V+KCGLDLDLFVGN
Sbjct: 121 PFAEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKNGDKGKIVHGHVLKCGLDLDLFVGN 180

Query: 181 ALISCYSKCQDVETARKVFDDMSLRDTVSWNSMIVGYTLNEREDDAIMFFHAF------- 240
           ALI+ YSKCQDVETARKVFD+MSLRD VSWNSMI GYTLN + D+AIM FHA        
Sbjct: 181 ALIAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMLFHAMLHNQTAC 240

Query: 241 ----------------------GFWVHSYIIKTGMEVGASLGSCLISMYGNCGHINIARD 300
                                 GFWVHSY+IKTGMEVGA LGSCLISMY NCGH+N+ARD
Sbjct: 241 SPDNATLVGILPACVTKSASQVGFWVHSYVIKTGMEVGAPLGSCLISMYANCGHVNVARD 300

Query: 301 VFNRIDNKNVIVWSAIIRCYGMHGLADEALNMFRRLEEVGVKPDGLIFLNLLSACSHAGL 360
           VF+RI +KNVIVWSAIIR YGMHG ADEALNMF  LEE G+KPDG+IFLNLLS CSHAGL
Sbjct: 301 VFDRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEAGLKPDGVIFLNLLSTCSHAGL 360

Query: 361 VAKGREIYKKMEAYGLERNDKHYACMVDLLARAGFLEQAAEFIEAMPVQAGKDVYGALFG 420
           V KGREIY+KMEAYG ER ++HYACMVDLL RAGFLEQA EFIE MPVQAGKDVYGAL G
Sbjct: 361 VEKGREIYEKMEAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLG 420

Query: 421 ACRIHNNLELAKEVGEKLFILDPENAGRYMILASMYEDAGQWEDAAKVRKLLRDRNIKKP 473
           ACRIHNN+ELAK+VG+KLF+LDPENAGRY+ILASMYEDAGQWEDAAK+RKLLRDRNI+KP
Sbjct: 421 ACRIHNNIELAKKVGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKP 480

[Close]

BLAST of IVF0011003 vs. NCBI nr
Match: XP_008449159.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like [Cucumis melo] >KAA0052934.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK11391.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 949 bits (2452), Expect = 0.0
Identity = 471/502 (93.82%), Postives = 471/502 (93.82%), Query Frame = 0


Query: 1   MNGLYRRTWQALTFRSQPFFSERRSGKYHRDSYDFMKLLGHCRTIRSVQELHAQILVEGL 60
           MNGLYRRTWQALTFRSQPFFSERRSGKYHRDSYDFMKLLGHCRTIRSVQELHAQILVEGL
Sbjct: 1   MNGLYRRTWQALTFRSQPFFSERRSGKYHRDSYDFMKLLGHCRTIRSVQELHAQILVEGL 60

Query: 61  DQNGFLATKLIGKYVELGEGESKMGTARKVFDRLLQRDVFLWNVVIQGYASFGPFVEALN 120
           DQNGFLATKLIGKYVELGEGESKMGTARKVFDRLLQRDVFLWNVVIQGYASFGPFVEALN
Sbjct: 61  DQNGFLATKLIGKYVELGEGESKMGTARKVFDRLLQRDVFLWNVVIQGYASFGPFVEALN 120

Query: 121 LFDEMRVSGEPTNRYTFPFVLKACGALKNSDKGEIVHGYVVKCGLDLDLFVGNALISCYS 180
           LFDEMRVSGEPTNRYTFPFVLKACGALKNSDKGEIVHGYVVKCGLDLDLFVGNALISCYS
Sbjct: 121 LFDEMRVSGEPTNRYTFPFVLKACGALKNSDKGEIVHGYVVKCGLDLDLFVGNALISCYS 180

Query: 181 KCQDVETARKVFDDMSLRDTVSWNSMIVGYTLNEREDDAIMFFHAF-------------- 240
           KCQDVETARKVFDDMSLRDTVSWNSMIVGYTLNEREDDAIMFFHA               
Sbjct: 181 KCQDVETARKVFDDMSLRDTVSWNSMIVGYTLNEREDDAIMFFHAMLHNQADCLPDDATL 240

Query: 241 ---------------GFWVHSYIIKTGMEVGASLGSCLISMYGNCGHINIARDVFNRIDN 300
                          GFWVHSYIIKTGMEVGASLGSCLISMYGNCGHINIARDVFNRIDN
Sbjct: 241 VAILPACATKSASQVGFWVHSYIIKTGMEVGASLGSCLISMYGNCGHINIARDVFNRIDN 300

Query: 301 KNVIVWSAIIRCYGMHGLADEALNMFRRLEEVGVKPDGLIFLNLLSACSHAGLVAKGREI 360
           KNVIVWSAIIRCYGMHGLADEALNMFRRLEEVGVKPDGLIFLNLLSACSHAGLVAKGREI
Sbjct: 301 KNVIVWSAIIRCYGMHGLADEALNMFRRLEEVGVKPDGLIFLNLLSACSHAGLVAKGREI 360

Query: 361 YKKMEAYGLERNDKHYACMVDLLARAGFLEQAAEFIEAMPVQAGKDVYGALFGACRIHNN 420
           YKKMEAYGLERNDKHYACMVDLLARAGFLEQAAEFIEAMPVQAGKDVYGALFGACRIHNN
Sbjct: 361 YKKMEAYGLERNDKHYACMVDLLARAGFLEQAAEFIEAMPVQAGKDVYGALFGACRIHNN 420

Query: 421 LELAKEVGEKLFILDPENAGRYMILASMYEDAGQWEDAAKVRKLLRDRNIKKPAGCSSIE 473
           LELAKEVGEKLFILDPENAGRYMILASMYEDAGQWEDAAKVRKLLRDRNIKKPAGCSSIE
Sbjct: 421 LELAKEVGEKLFILDPENAGRYMILASMYEDAGQWEDAAKVRKLLRDRNIKKPAGCSSIE 480

[Close]

BLAST of IVF0011003 vs. NCBI nr
Match: XP_011650274.1 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic [Cucumis sativus] >KGN55630.1 hypothetical protein Csa_011363 [Cucumis sativus])

HSP 1 Score: 852 bits (2202), Expect = 1.40e-309
Identity = 419/502 (83.47%), Postives = 441/502 (87.85%), Query Frame = 0


Query: 1   MNGLYRRTWQALTFRSQPFFSERRSGKYHRDSYDFMKLLGHCRTIRSVQELHAQILVEGL 60
           MNGL RRTWQALTFR+QPFFSE   GKYHRDSY F+KLLGHCR+IRSVQELHAQILVEGL
Sbjct: 1   MNGLCRRTWQALTFRNQPFFSEWSFGKYHRDSYGFIKLLGHCRSIRSVQELHAQILVEGL 60

Query: 61  DQNGFLATKLIGKYVELGEGESKMGTARKVFDRLLQRDVFLWNVVIQGYASFGPFVEALN 120
           DQNGF+A KLIGKYVE  EGE KMGTARKVFD L++RDVF+WNVVIQGYAS GPFVEALN
Sbjct: 61  DQNGFVAAKLIGKYVEHDEGEVKMGTARKVFDTLVRRDVFVWNVVIQGYASLGPFVEALN 120

Query: 121 LFDEMRVSGEPTNRYTFPFVLKACGALKNSDKGEIVHGYVVKCGLDLDLFVGNALISCYS 180
           LFDEMRVSGEPTNRYTFPFVLKACGA+KNSDKGEIVHG+VVKCGLDLDLFVGNALI+ YS
Sbjct: 121 LFDEMRVSGEPTNRYTFPFVLKACGAMKNSDKGEIVHGHVVKCGLDLDLFVGNALIAFYS 180

Query: 181 KCQDVETARKVFDDMSLRDTVSWNSMIVGYTLNEREDDAIMFFHAF-------------- 240
           KCQDVETARKVFDDMSLRD VSWNSMIVGYTLN +ED+AIMFFHA               
Sbjct: 181 KCQDVETARKVFDDMSLRDIVSWNSMIVGYTLNGKEDEAIMFFHAMLHNQADCTPDSATL 240

Query: 241 ---------------GFWVHSYIIKTGMEVGASLGSCLISMYGNCGHINIARDVFNRIDN 300
                          GFWVHSY+IKTG+EVGA LGSCLI MYGNCGH+NIARDVF+RID+
Sbjct: 241 VAILPACATKSASQVGFWVHSYVIKTGIEVGAPLGSCLICMYGNCGHVNIARDVFDRIDD 300

Query: 301 KNVIVWSAIIRCYGMHGLADEALNMFRRLEEVGVKPDGLIFLNLLSACSHAGLVAKGREI 360
           KNVIVWSAIIRCYGMHG ADEA NMFRRLEE GVKPDGLIFLNLLSACSHAGLVAKG EI
Sbjct: 301 KNVIVWSAIIRCYGMHGFADEAFNMFRRLEEAGVKPDGLIFLNLLSACSHAGLVAKGHEI 360

Query: 361 YKKMEAYGLERNDKHYACMVDLLARAGFLEQAAEFIEAMPVQAGKDVYGALFGACRIHNN 420
           Y+KMEAYGLER D HYACMVDLL RAGFLEQA EFIE MPVQAGKDVYGAL GACRIHNN
Sbjct: 361 YEKMEAYGLERKDNHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGACRIHNN 420

Query: 421 LELAKEVGEKLFILDPENAGRYMILASMYEDAGQWEDAAKVRKLLRDRNIKKPAGCSSIE 473
           LELAKEVGEKLFILDPE A RY+ LA+MYEDAGQWEDAAK+RKLLRDRNI+KPAGCSSIE
Sbjct: 421 LELAKEVGEKLFILDPEKASRYVTLATMYEDAGQWEDAAKLRKLLRDRNIRKPAGCSSIE 480

[Close]

BLAST of IVF0011003 vs. NCBI nr
Match: XP_038905146.1 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 808 bits (2086), Expect = 7.77e-292
Identity = 397/509 (78.00%), Postives = 433/509 (85.07%), Query Frame = 0


Query: 1   MNGLYRRTWQALTFRSQP-------FFSERRSGKYHRDSYDFMKLLGHCRTIRSVQELHA 60
           MN L RRT QAL  R+QP       FFS+R SGKYHRDSYD+ KLL HCRTIRSVQ LHA
Sbjct: 1   MNELCRRTPQALASRNQPCFRLLRSFFSDRSSGKYHRDSYDYTKLLDHCRTIRSVQGLHA 60

Query: 61  QILVEGLDQNGFLATKLIGKYVELGEGESKMGTARKVFDRLLQRDVFLWNVVIQGYASFG 120
           QI+VEG DQNGFLATKLIGKYVE   GESKMG ARKVFD+LLQRDVF+WNVVIQGYA+ G
Sbjct: 61  QIIVEGQDQNGFLATKLIGKYVE--HGESKMGIARKVFDKLLQRDVFVWNVVIQGYANLG 120

Query: 121 PFVEALNLFDEMRVSGEPTNRYTFPFVLKACGALKNSDKGEIVHGYVVKCGLDLDLFVGN 180
           PFVEALNLFDEMRVSG PTNRYTFPFVLKACGA+KNSDKG+IVHG+V+KCGLDLDLFV N
Sbjct: 121 PFVEALNLFDEMRVSGAPTNRYTFPFVLKACGAMKNSDKGKIVHGHVLKCGLDLDLFVSN 180

Query: 181 ALISCYSKCQDVETARKVFDDMSLRDTVSWNSMIVGYTLNEREDDAIMFFHAF------- 240
           ALI+ Y+KCQDVETARKVFD+MSLRD VSWNSMI GYTLNE+ +DAIM FHA        
Sbjct: 181 ALIAFYAKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNEKVEDAIMLFHAMLHNQSAC 240

Query: 241 ----------------------GFWVHSYIIKTGMEVGASLGSCLISMYGNCGHINIARD 300
                                 GFWVHSY+IKTGMEVGA LGSCLIS+Y NCGH+NIARD
Sbjct: 241 SPDSATLLGILPACVTKSASQVGFWVHSYVIKTGMEVGAQLGSCLISVYANCGHVNIARD 300

Query: 301 VFNRIDNKNVIVWSAIIRCYGMHGLADEALNMFRRLEEVGVKPDGLIFLNLLSACSHAGL 360
           VFNRID+KNVIVWSAIIRCYGMHG ADEALNMF RLEE G+KPDG++FLNLLS CSHAGL
Sbjct: 301 VFNRIDDKNVIVWSAIIRCYGMHGFADEALNMFTRLEEAGLKPDGVLFLNLLSTCSHAGL 360

Query: 361 VAKGREIYKKMEAYGLERNDKHYACMVDLLARAGFLEQAAEFIEAMPVQAGKDVYGALFG 420
           +AKG EIY+KME YG+ER ++HYACMVDLL RAGFLEQA EFIE MPVQAGKDVYGAL G
Sbjct: 361 IAKGHEIYEKMEGYGVERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLG 420

Query: 421 ACRIHNNLELAKEVGEKLFILDPENAGRYMILASMYEDAGQWEDAAKVRKLLRDRNIKKP 473
           ACRIH N+ELAKE+GEKLFILD +NAGRYMILASMYEDAGQWEDAAK+RKLLRDRN++KP
Sbjct: 421 ACRIHKNIELAKEIGEKLFILDSQNAGRYMILASMYEDAGQWEDAAKLRKLLRDRNVRKP 480

[Close]

BLAST of IVF0011003 vs. NCBI nr
Match: XP_022971604.1 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 788 bits (2034), Expect = 6.40e-284
Identity = 389/509 (76.42%), Postives = 429/509 (84.28%), Query Frame = 0


Query: 1   MNGLYRRTWQALTFRSQPFFSERRS-------GKYHRDSYDFMKLLGHCRTIRSVQELHA 60
           MNGLYRR  +AL  R QPFF   RS        +YHRDSYD+ KLL HCR+IRSVQELHA
Sbjct: 1   MNGLYRRYSRALVSRKQPFFRFLRSIFNDWSRREYHRDSYDYTKLLQHCRSIRSVQELHA 60

Query: 61  QILVEGLDQNGFLATKLIGKYVELGEGESKMGTARKVFDRLLQRDVFLWNVVIQGYASFG 120
           QI+VEG DQNGFLATKLIGKY E GE   KMG ARKVFDRLL++DVF+WNVVIQGYA++G
Sbjct: 61  QIVVEGHDQNGFLATKLIGKYAEYGE--EKMGIARKVFDRLLEKDVFVWNVVIQGYANWG 120

Query: 121 PFVEALNLFDEMRVSGEPTNRYTFPFVLKACGALKNSDKGEIVHGYVVKCGLDLDLFVGN 180
           PF EALNL+DEMRV GEPTNRYTFPFVLKACGA+KNS+KG+IVHG+V+KCGLDLDLFVGN
Sbjct: 121 PFAEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKNSEKGKIVHGHVLKCGLDLDLFVGN 180

Query: 181 ALISCYSKCQDVETARKVFDDMSLRDTVSWNSMIVGYTLNEREDDAIMFFHAF------- 240
           ALI+ YSKCQDVETARKVFD+MSLRD VSWNSMI GYTLN + D+AIM FHA        
Sbjct: 181 ALIAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMLFHAMLHNQTAC 240

Query: 241 ----------------------GFWVHSYIIKTGMEVGASLGSCLISMYGNCGHINIARD 300
                                 GFWVHSY+IKTGMEVGA LGSCLISMY NCGH+NIARD
Sbjct: 241 SPDNATLVGILPACVTKSASQVGFWVHSYVIKTGMEVGAPLGSCLISMYANCGHVNIARD 300

Query: 301 VFNRIDNKNVIVWSAIIRCYGMHGLADEALNMFRRLEEVGVKPDGLIFLNLLSACSHAGL 360
           VF+RI +KNVIVWSAIIR YGMHG ADEALNMF  LEEVG+KPDG+IFLNLLS CSHAGL
Sbjct: 301 VFDRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEVGLKPDGVIFLNLLSTCSHAGL 360

Query: 361 VAKGREIYKKMEAYGLERNDKHYACMVDLLARAGFLEQAAEFIEAMPVQAGKDVYGALFG 420
           V KGREIY+KMEAYG ER ++HYACMVDLL RAGFLEQA EFIE MPVQAGKDVYGAL G
Sbjct: 361 VEKGREIYEKMEAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLG 420

Query: 421 ACRIHNNLELAKEVGEKLFILDPENAGRYMILASMYEDAGQWEDAAKVRKLLRDRNIKKP 473
           ACRIHNN+ELAKEVG+KLF+LDPENAGRY+ILASMYEDAGQWEDAAK+RKLLRDRNI+KP
Sbjct: 421 ACRIHNNIELAKEVGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKP 480

[Close]

BLAST of IVF0011003 vs. NCBI nr
Match: XP_023540099.1 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 781 bits (2018), Expect = 1.75e-281
Identity = 386/509 (75.83%), Postives = 428/509 (84.09%), Query Frame = 0


Query: 1   MNGLYRRTWQALTFRSQPFFSERRS-------GKYHRDSYDFMKLLGHCRTIRSVQELHA 60
           MNGL+ R+ +AL  R++PFF   RS        +YHRDSYD+ KLL HCR+IRSVQELHA
Sbjct: 1   MNGLHWRSSRALVSRNRPFFRFLRSIFNDWSRREYHRDSYDYTKLLQHCRSIRSVQELHA 60

Query: 61  QILVEGLDQNGFLATKLIGKYVELGEGESKMGTARKVFDRLLQRDVFLWNVVIQGYASFG 120
           QI+VEG DQNGFLATKLIGKY E GE   KMG ARKVFDRLL++DVFLWNVVIQGYA++G
Sbjct: 61  QIVVEGHDQNGFLATKLIGKYAEYGE--EKMGIARKVFDRLLEKDVFLWNVVIQGYANWG 120

Query: 121 PFVEALNLFDEMRVSGEPTNRYTFPFVLKACGALKNSDKGEIVHGYVVKCGLDLDLFVGN 180
           PF EALNL+DEMRV GEPTNRYTFPFVLKACGA+KN DKG+IVHG+V+KCGLDLDLFVGN
Sbjct: 121 PFAEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKNGDKGKIVHGHVLKCGLDLDLFVGN 180

Query: 181 ALISCYSKCQDVETARKVFDDMSLRDTVSWNSMIVGYTLNEREDDAIMFFHAF------- 240
           ALI+ YSKCQDVETARKVFD+MSLRD VSWNSMI GYTLN + D+AIM FHA        
Sbjct: 181 ALIAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMIFHAMLHNQTAC 240

Query: 241 ----------------------GFWVHSYIIKTGMEVGASLGSCLISMYGNCGHINIARD 300
                                 GFWVHSYIIKTGMEVGA LGSCLISMY NCGH+NIARD
Sbjct: 241 SPDNATLVGILPACVTKSASQVGFWVHSYIIKTGMEVGAPLGSCLISMYANCGHVNIARD 300

Query: 301 VFNRIDNKNVIVWSAIIRCYGMHGLADEALNMFRRLEEVGVKPDGLIFLNLLSACSHAGL 360
           VF+RI +KNVIVWSAIIR YGMHG ADEALNMF  LEE G+KPDG+IFLNLLS CSHAGL
Sbjct: 301 VFDRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEAGLKPDGVIFLNLLSTCSHAGL 360

Query: 361 VAKGREIYKKMEAYGLERNDKHYACMVDLLARAGFLEQAAEFIEAMPVQAGKDVYGALFG 420
           V KGREIY++MEAYG ER ++HYACMVDLL RAGFLEQA EFIE MPVQAGKDVYGAL G
Sbjct: 361 VEKGREIYERMEAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLG 420

Query: 421 ACRIHNNLELAKEVGEKLFILDPENAGRYMILASMYEDAGQWEDAAKVRKLLRDRNIKKP 473
           ACRIHNN+ELAKEVG+KLF+LDPENAGRY+ILASMYEDAGQWEDAAK+RKLLRDRNI+KP
Sbjct: 421 ACRIHNNIELAKEVGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKP 480

[Close]

BLAST of IVF0011003 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 325.9 bits (834), Expect = 5.5e-89
Identity = 169/505 (33.47%), Postives = 274/505 (54.26%), Query Frame = 0


Query: 31  DSYDFMKLLGHCRTIRSV---QELHAQILVEGLDQNGFLATKLIGKYVELGEGESKMGTA 90
           + Y F  L+     + S+   Q LH   +   +  + F+A  LI  Y   G+    + +A
Sbjct: 130 NKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGD----LDSA 189

Query: 91  RKVFDRLLQRDVFLWNVVIQGYASFGPFVEALNLFDEMRVSGEPTNRYTFPFVLKACGAL 150
            KVF  + ++DV  WN +I G+   G   +AL LF +M       +  T   VL AC  +
Sbjct: 190 CKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKI 249

Query: 151 KNSDKGEIVHGYVVKCGLDLDLFVGNALISCYSKCQDVETARKVFDDMSLRDTVSWNSMI 210
           +N + G  V  Y+ +  ++++L + NA++  Y+KC  +E A+++FD M  +D V+W +M+
Sbjct: 250 RNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTML 309

Query: 211 VGYTLNE-------------------------------REDDAIMFFH------------ 270
            GY ++E                               + ++A++ FH            
Sbjct: 310 DGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQ 369

Query: 271 ----------------AFGFWVHSYIIKTGMEVGASLGSCLISMYGNCGHINIARDVFNR 330
                             G W+HSYI K G+ +   + S LI MY  CG +  +R+VFN 
Sbjct: 370 ITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNS 429

Query: 331 IDNKNVIVWSAIIRCYGMHGLADEALNMFRRLEEVGVKPDGLIFLNLLSACSHAGLVAKG 390
           ++ ++V VWSA+I    MHG  +EA++MF +++E  VKP+G+ F N+  ACSH GLV + 
Sbjct: 430 VEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEA 489

Query: 391 REIYKKMEA-YGLERNDKHYACMVDLLARAGFLEQAAEFIEAMPVQAGKDVYGALFGACR 450
             ++ +ME+ YG+   +KHYAC+VD+L R+G+LE+A +FIEAMP+     V+GAL GAC+
Sbjct: 490 ESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACK 549

Query: 451 IHNNLELAKEVGEKLFILDPENAGRYMILASMYEDAGQWEDAAKVRKLLRDRNIKKPAGC 473
           IH NL LA+    +L  L+P N G +++L+++Y   G+WE+ +++RK +R   +KK  GC
Sbjct: 550 IHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGC 609

[Close]

BLAST of IVF0011003 vs. TAIR 10
Match: AT3G57430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 314.3 bits (804), Expect = 1.7e-85
Identity = 170/474 (35.86%), Postives = 259/474 (54.64%), Query Frame = 0


Query: 41  HCRTIRSVQELHAQILVEG-LDQNGFLATKLIGKYVELGEGESKMGTARKVFDRLLQRDV 100
           H   +R+ +ELHA  L  G LD+N F+ + L+  Y        ++ + R+VFD +  R +
Sbjct: 314 HLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNC----KQVLSGRRVFDGMFDRKI 373

Query: 101 FLWNVVIQGYASFGPFVEALNLFDEMRVS-GEPTNRYTFPFVLKACGALKNSDKGEIVHG 160
            LWN +I GY+      EAL LF  M  S G   N  T   V+ AC       + E +HG
Sbjct: 374 GLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHG 433

Query: 161 YVVKCGLDLDLFVGNALISCYSKCQDVETARKVFDDMSLRDTVSWNSMIVGYTLNEREDD 220
           +VVK GLD D FV N L+  YS+   ++ A ++F  M  RD V+WN+MI GY  +E  +D
Sbjct: 434 FVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHED 493

Query: 221 AIMFFH--------------------------------------AFGFWVHSYIIKTGME 280
           A++  H                                      A G  +H+Y IK  + 
Sbjct: 494 ALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLA 553

Query: 281 VGASLGSCLISMYGNCGHINIARDVFNRIDNKNVIVWSAIIRCYGMHGLADEALNMFRRL 340
              ++GS L+ MY  CG + ++R VF++I  KNVI W+ II  YGMHG   EA+++ R +
Sbjct: 554 TDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMM 613

Query: 341 EEVGVKPDGLIFLNLLSACSHAGLVAKGREIYKKMEA-YGLERNDKHYACMVDLLARAGF 400
              GVKP+ + F+++ +ACSH+G+V +G  I+  M+  YG+E +  HYAC+VDLL RAG 
Sbjct: 614 MVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGR 673

Query: 401 LEQAAEFIEAMPVQAGK-DVYGALFGACRIHNNLELAKEVGEKLFILDPENAGRYMILAS 460
           +++A + +  MP    K   + +L GA RIHNNLE+ +   + L  L+P  A  Y++LA+
Sbjct: 674 IKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLAN 733

Query: 461 MYEDAGQWEDAAKVRKLLRDRNIKKPAGCSSIEVDRIHHVFGKKDETHPFTEEI 473
           +Y  AG W+ A +VR+ ++++ ++K  GCS IE     H F   D +HP +E++
Sbjct: 734 IYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKL 783

[Close]

BLAST of IVF0011003 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 312.0 bits (798), Expect = 8.3e-85
Identity = 170/502 (33.86%), Postives = 266/502 (52.99%), Query Frame = 0


Query: 31  DSYDFMKLLGHC---RTIRSVQELHAQILVEGLDQNGFLATKLIGKYVELG--------- 90
           +SY F  +L  C   +  +  Q++H  +L  G D + ++ T LI  YV+ G         
Sbjct: 133 NSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVF 192

Query: 91  ---------------EGESKMG---TARKVFDRLLQRDVFLWNVVIQGYASFGPFVEALN 150
                          +G +  G    A+K+FD +  +DV  WN +I GYA  G + EAL 
Sbjct: 193 DKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALE 252

Query: 151 LFDEMRVSGEPTNRYTFPFVLKACGALKNSDKGEIVHGYVVKCGLDLDLFVGNALISCYS 210
           LF +M  +    +  T   V+ AC    + + G  VH ++   G   +L + NALI  YS
Sbjct: 253 LFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYS 312

Query: 211 KCQDVETARKVFDDMSLRDTVSWNSMIVGYTLNEREDDAIMFFHA--------------- 270
           KC ++ETA  +F+ +  +D +SWN++I GYT      +A++ F                 
Sbjct: 313 KCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLS 372

Query: 271 ------------FGFWVHSYIIK--TGMEVGASLGSCLISMYGNCGHINIARDVFNRIDN 330
                        G W+H YI K   G+   +SL + LI MY  CG I  A  VFN I +
Sbjct: 373 ILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILH 432

Query: 331 KNVIVWSAIIRCYGMHGLADEALNMFRRLEEVGVKPDGLIFLNLLSACSHAGLVAKGREI 390
           K++  W+A+I  + MHG AD + ++F R+ ++G++PD + F+ LLSACSH+G++  GR I
Sbjct: 433 KSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492

Query: 391 YKKM-EAYGLERNDKHYACMVDLLARAGFLEQAAEFIEAMPVQAGKDVYGALFGACRIHN 450
           ++ M + Y +    +HY CM+DLL  +G  ++A E I  M ++    ++ +L  AC++H 
Sbjct: 493 FRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHG 552

Query: 451 NLELAKEVGEKLFILDPENAGRYMILASMYEDAGQWEDAAKVRKLLRDRNIKKPAGCSSI 473
           N+EL +   E L  ++PEN G Y++L+++Y  AG+W + AK R LL D+ +KK  GCSSI
Sbjct: 553 NVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSI 612

[Close]

BLAST of IVF0011003 vs. TAIR 10
Match: AT3G46790.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 311.2 bits (796), Expect = 1.4e-84
Identity = 160/478 (33.47%), Postives = 271/478 (56.69%), Query Frame = 0


Query: 30  RDSYDFMKL-LGHCRTIRSVQELHAQILVEGLDQNGFLATKLIGKYVELGEGESKMGTAR 89
           + +Y+ + L  GH  ++     +H  IL  G DQ+ FLATKLIG Y +LG     +  AR
Sbjct: 77  QQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLG----SVDYAR 136

Query: 90  KVFDRLLQRDVFLWNVVIQGYASFGPFVEALNLFDEMRVSGEPTNRYTFPFVLKACGA-- 149
           KVFD+  +R +++WN + +     G   E L L+ +M   G  ++R+T+ +VLKAC A  
Sbjct: 137 KVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASE 196

Query: 150 --LKNSDKGEIVHGYVVKCGLDLDLFVGNALISCYSKCQDVETARKVFDDMSLRDTVSWN 209
             + +  KG+ +H ++ + G    +++   L+  Y++   V+ A  VF  M +R+ VSW+
Sbjct: 197 CTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWS 256

Query: 210 SMIVGYTLNEREDDAIMFFHAF-----------------------------GFWVHSYII 269
           +MI  Y  N +  +A+  F                                G  +H YI+
Sbjct: 257 AMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYIL 316

Query: 270 KTGMEVGASLGSCLISMYGNCGHINIARDVFNRIDNKNVIVWSAIIRCYGMHGLADEALN 329
           + G++    + S L++MYG CG + + + VF+R+ +++V+ W+++I  YG+HG   +A+ 
Sbjct: 317 RRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQ 376

Query: 330 MFRRLEEVGVKPDGLIFLNLLSACSHAGLVAKGREIYKKM-EAYGLERNDKHYACMVDLL 389
           +F  +   G  P  + F+++L ACSH GLV +G+ +++ M   +G++   +HYACMVDLL
Sbjct: 377 IFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLL 436

Query: 390 ARAGFLEQAAEFIEAMPVQAGKDVYGALFGACRIHNNLELAKEVGEKLFILDPENAGRYM 449
            RA  L++AA+ ++ M  + G  V+G+L G+CRIH N+ELA+    +LF L+P+NAG Y+
Sbjct: 437 GRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYV 496

Query: 450 ILASMYEDAGQWEDAAKVRKLLRDRNIKKPAGCSSIEVDRIHHVFGKKDETHPFTEEI 473
           +LA +Y +A  W++  +V+KLL  R ++K  G   +EV R  + F   DE +P  E+I
Sbjct: 497 LLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQI 550

[Close]

BLAST of IVF0011003 vs. TAIR 10
Match: AT3G49142.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 311.2 bits (796), Expect = 1.4e-84
Identity = 174/524 (33.21%), Postives = 268/524 (51.15%), Query Frame = 0


Query: 45  IRSVQELHAQILVEGLDQNGFLATKLIGKYVELGEGESKMGTARKVFDRLLQRDVFLWNV 104
           IR+++ +H++I++E L  N  L  KL+  Y  L +    + +ARKVFD + +R+V + NV
Sbjct: 55  IRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKD----VASARKVFDEIPERNVIIINV 114

Query: 105 VIQGYASFGPFVEALNLFDEMRVSGEPTNRYTFPFVLKACGALKNSDKGEIVHGYVVKCG 164
           +I+ Y + G + E + +F  M       + YTFP VLKAC        G  +HG   K G
Sbjct: 115 MIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVG 174

Query: 165 LDLDLFVGNALISCYSKCQDVETARKVFDDMSLRDTVSWNSMIVGYTLNEREDDAI---- 224
           L   LFVGN L+S Y KC  +  AR V D+MS RD VSWNS++VGY  N+R DDA+    
Sbjct: 175 LSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCR 234

Query: 225 ----------------------------------MFFH---------------------- 284
                                             MFF                       
Sbjct: 235 EMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMP 294

Query: 285 -----------------------------------AFGFWVHSYIIKTGMEVGASLGSCL 344
                                              + G  +H YI +  +     L + L
Sbjct: 295 VEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENAL 354

Query: 345 ISMYGNCGHINIARDVFNRIDNKNVIVWSAIIRCYGMHGLADEALNMFRRLEEVGVKPDG 404
           I MY  CG +  ARDVF  + +++V+ W+A+I  YG  G   +A+ +F +L++ G+ PD 
Sbjct: 355 IDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDS 414

Query: 405 LIFLNLLSACSHAGLVAKGREIYKKM-EAYGLERNDKHYACMVDLLARAGFLEQAAEFIE 464
           + F+  L+ACSHAGL+ +GR  +K M + Y +    +H ACMVDLL RAG +++A  FI+
Sbjct: 415 IAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQ 474

Query: 465 AMPVQAGKDVYGALFGACRIHNNLELAKEVGEKLFILDPENAGRYMILASMYEDAGQWED 473
            M ++  + V+GAL GACR+H++ ++     +KLF L PE +G Y++L+++Y  AG+WE+
Sbjct: 475 DMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEE 534

The following BLAST results are available for this feature:

BLAST of IVF0011003 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82380	7.8e-88	33.47	Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop...	[more]
Q7Y211	2.3e-84	35.86	Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidop...	[more]
Q9LN01	1.2e-83	33.86	Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop...	[more]
Q9STF3	2.0e-83	33.47	Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidop...	[more]
P0C899	2.0e-83	33.21	Putative pentatricopeptide repeat-containing protein At3g49142 OS=Arabidopsis th...	[more]

BLAST of IVF0011003 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UCB1	1.5e-275	94.01	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BMB7	1.5e-275	94.01	pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like OS=Cuc...	[more]
A0A0A0L101	1.5e-246	83.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G002500 PE=4 SV=1	[more]
A0A6J1I919	4.4e-227	76.57	pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like OS=Cuc...	[more]
A0A6J1FMZ9	9.2e-225	75.39	pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like OS=Cuc...	[more]

BLAST of IVF0011003 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449159.1	0.0	93.82	PREDICTED: pentatricopeptide repeat-containing protein At2g29760, chloroplastic-...	[more]
XP_011650274.1	1.40e-309	83.47	pentatricopeptide repeat-containing protein At3g46790, chloroplastic [Cucumis sa...	[more]
XP_038905146.1	7.77e-292	78.00	pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Benin...	[more]
XP_022971604.1	6.40e-284	76.42	pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucur...	[more]
XP_023540099.1	1.75e-281	75.83	pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucur...	[more]

BLAST of IVF0011003 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G29760.1	5.5e-89	33.47	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G57430.1	1.7e-85	35.86	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G08070.1	8.3e-85	33.86	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G46790.1	1.4e-84	33.47	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G49142.1	1.4e-84	33.21	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 247..273 e-value: 1.0 score: 9.8 coord: 314..339 e-value: 0.045 score: 14.0 coord: 276..305 e-value: 2.9E-5 score: 24.0 coord: 173..196 e-value: 0.0011 score: 19.0 coord: 201..224 e-value: 0.033 score: 14.4
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 98..144 e-value: 1.8E-8 score: 34.4
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 315..343 e-value: 0.0018 score: 16.3 coord: 101..129 e-value: 1.4E-4 score: 19.8 coord: 173..198 e-value: 3.8E-5 score: 21.6 coord: 276..308 e-value: 2.0E-6 score: 25.6
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 168..202 score: 8.867749
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 98..132 score: 10.544828
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 273..307 score: 11.629997
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 247..464 e-value: 6.0E-33 score: 116.5
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 11..155 e-value: 1.0E-14 score: 56.3 coord: 156..228 e-value: 6.3E-13 score: 50.4
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 83..444
None	No IPR available	PANTHER	PTHR24015	OS07G0578800 PROTEIN-RELATED	coord: 226..473
None	No IPR available	PANTHER	PTHR24015:SF1933	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 24..225
None	No IPR available	PANTHER	PTHR24015	OS07G0578800 PROTEIN-RELATED	coord: 24..225
None	No IPR available	PANTHER	PTHR24015:SF1933	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 226..473

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0011003.1	IVF0011003.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009451	RNA modification
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding