IVF0010997 (gene) Melon (IVF77) v1

Overview


Name	IVF0010997
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Protein SYS1 homolog
Location	chr01: 31545407 .. 31547195 (-)
RNA-Seq Expression	IVF0010997
Synteny	IVF0010997

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGACCCTGGCTCATTGTTGCCCAAATTGTTTGCCTTCAATGTTTCTATTACCTCACTCTTGGTATATTCCTTGCAACTTTAGTCGGCACTCGCGTTTCTCGGATCAGCCTTGTTTACTTCTTTGATTATGCTACAATAACTGTTTCTACTGCCACTGGTGGTGTGTGATTGCTTCGTTCCTGTTAAGTGCAATTGCTGGGTAAGAATTTGTTTTAGGTTTATCTCCCCCCCCCCCCGCGTATTTGGGATAATATTTGCAATGCATGGTTAGGAATAATCTCAACCATGTTTGTCTGCCCTGTTTTTATATATTAAAAGTTAGAAAGTAGAACTACTTTAGCCGCATGTAATACACGATACTTGGTTTAGACAAGTTGTATTTGATGCAGCCTTTGTTACATTATTTGGAATGATTTAGATTAAACACCCTCGATAATATTTTTTGATTGTTAACCATGATAATGGTTTGCTTTGAATGTCATATTAATGTTTGTGTTTTTATCTCTGTATTATGTAATGAGGCCATTTTTTGTAAACTACAATTGCACCCATCTCTTTGGTGTTTGAAGCTTATTCTTAATGGTTCATAGTATCCTGTATGTGTTCCTTCAGGAAGTGATGTGAATTTCAATTAAGCTCCATGTCATGTACTAGCTGGTTAGCTACTTTTGTTAGAACCTTTTTTTCCCTTGACTTCCTATCTTCTGAATCCTTTTAGTCTGTTTTGACTTTGAAGAAATATATTGTTTTGCCTTTTTAGATGTTGTCTATCACTATCACAGAAATTCACATGTTAATAGTTTGGTGTTTGGGTTTGTTAGGTCTACTTATCATAAAACTACATTCCAAATTGCCAATATAAACATAAATGTTGAAACTCTACGGAATGAGAAAGCAAGTCATTAGAATATGCCGTTATTGGTTTGTTGTCATGCTTTTTATTTCAATTTTTGGGCTGATACTGGCAGTTTCCTCCCTTGAATATTTTGTTTGGAATATGGGCGATGGATTGGGGGCTGGGGTGGTTGAAGGATGGCAACATAGTTTTGGGAGTAATAGGGACAGTAGATATTGTTTCTGTTAAATGTTATCCTGAAAGTTACTTTCTAGCATTGTACCCTTTTCTTATGTTTAATACACTTGCTGGTAACTAGTTGCAAAGTAATCAATTCTGAATTAATTTTTTTTCTCATATTGTTTAGTATGTTTATATAAAACTAGTGTCAGCTTCTCTTACCATTACGTCTTTCTTGTCATACAGAGCAGGTTATCTGGTTTATTTGATTGAAAGAGCAAAGAAGTGCTTAGATTTTGCAGCCACACTCTATATATTCCACCTTTTCATTTGTATCGTTATGGAGGGTGGCTTCCTCAATGACGTGGTGGGTTGTGAAAGGAACTGGGCTTGTAGTCATGTCTTACTGGGTGAATACCTGTGCATCAAGCGGGAGCTTCGAGAAATTCCTATAACACGATTGCGTTCAAGTAAGGCTTCTTTCCTCAAGGAAATCAATAATTAACTTCTTTGACATTCAAATTGTTTAAAATTCACTATTCACAATACTACTGCTAACTAACATGGTTGACTGGAAAACAAAACATGCTAGTACAAAAATTTTAATTCGTGTTAGCCTATTATTTTACTCCATTCCATGCTCGACTTTGCAGTTGAGTTGACATGTCCCAAGTTGTTTATTTTGAGAAAAAATTTGTTCTCATGTTTAAGATCACTCAGAAGTAGCTGTAGTGAACCATAATGAAAACATATTTTGGTGCAGATGTCTGA

mRNA sequence

ATGGGACCCTGGCTCATTGTTGCCCAAATTGTTTGCCTTCAATGTTTCTATTACCTCACTCTTGGTATATTCCTTGCAACTTTAGTCGGCACTCGCGTTTCTCGGATCAGCCTTGTTTACTTCTTTGATTATGCTACAATAACTGTTTCTACTGCCACTGGTGGTGTAGCAGGTTATCTGGTTTATTTGATTGAAAGAGCAAAGAAGTGCTTAGATTTTGCAGCCACACTCTATATATTCCACCTTTTCATTTGTATCGTTATGGAGGGTGGCTTCCTCAATGACGTGGTGGGTTGTGAAAGGAACTGGGCTTGTAGTCATGTCTTACTGGGTGAATACCTGTGCATCAAGCGGGAGCTTCGAGAAATTCCTATAACACGATTGCGTTCAAATGTCTGA

Coding sequence (CDS)

ATGGGACCCTGGCTCATTGTTGCCCAAATTGTTTGCCTTCAATGTTTCTATTACCTCACTCTTGGTATATTCCTTGCAACTTTAGTCGGCACTCGCGTTTCTCGGATCAGCCTTGTTTACTTCTTTGATTATGCTACAATAACTGTTTCTACTGCCACTGGTGGTGTAGCAGGTTATCTGGTTTATTTGATTGAAAGAGCAAAGAAGTGCTTAGATTTTGCAGCCACACTCTATATATTCCACCTTTTCATTTGTATCGTTATGGAGGGTGGCTTCCTCAATGACGTGGTGGGTTGTGAAAGGAACTGGGCTTGTAGTCATGTCTTACTGGGTGAATACCTGTGCATCAAGCGGGAGCTTCGAGAAATTCCTATAACACGATTGCGTTCAAATGTCTGA

Protein sequence

MGPWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTATGGVAGYLVYLIERAKKCLDFAATLYIFHLFICIVMEGGFLNDVVGCERNWACSHVLLGEYLCIKRELREIPITRLRSNV

Homology

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BLAST of IVF0010997 vs. ExPASy Swiss-Prot
Match: Q55E69 (Protein SYS1 homolog OS=Dictyostelium discoideum OX=44689 GN=sys1 PE=3 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 4.3e-12
Identity = 50/143 (34.97%), Postives = 76/143 (53.15%), Query Frame = 0


Query: 3   PWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTATGGV--AGYL 62
           P LI+ QI+ +QC YY+ L   L  L     S +SL   F+Y +I   + +G V    +L
Sbjct: 10  PKLIIGQILSIQCLYYILLAGILYLLDSMFSSSLSLEQMFEYQSINTHSQSGRVVMTAFL 69

Query: 63  V----------YLIERAKKCLDFAATLYIFHLFICIVMEGGFLNDVVGCERNWACSHV-- 122
           +          Y++ER+KKCLD +AT+   H FI + +  GF   VV     WA   +  
Sbjct: 70  INSLFGSFCLKYIVERSKKCLDHSATVTFIH-FIIVWIVSGFPKTVVW----WAIQLIGM 129

Query: 123 ----LLGEYLCIKRELREIPITR 128
               ++GEYLC+++EL +IP+ R
Sbjct: 130 VIMAMIGEYLCMRKELMDIPLQR 147

[Close]

BLAST of IVF0010997 vs. ExPASy Swiss-Prot
Match: Q1RMQ3 (Protein SYS1 homolog OS=Bos taurus OX=9913 GN=SYS1 PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.1e-11
Identity = 48/137 (35.04%), Postives = 72/137 (52.55%), Query Frame = 0


Query: 3   PWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTATGGVAGY--- 62
           P LI++QIV +Q  YY +LG++LA + G   S  SL   FD   +  ST  G ++     
Sbjct: 12  PLLILSQIVLMQTVYYGSLGLWLALVDGLVHSSPSLDQVFDAEILGFSTPPGRLSTMSFV 71

Query: 63  ---------LVYLIERAKKCLDFAATLYIFHLFICIVMEGGFLNDVVGCERNWACSHVL- 122
                    L+Y I R K+CLDF  T++ FHL  C +    F + +        C  ++ 
Sbjct: 72  LNALTCALGLLYFIRRGKQCLDFTVTVHFFHLLGCWLYSSRFPSALTWWLVQAVCIALMA 131

Query: 123 -LGEYLCIKRELREIPI 126
            +GEYLC++ EL+EIP+
Sbjct: 132 VIGEYLCMRSELKEIPL 148

[Close]

BLAST of IVF0010997 vs. ExPASy Swiss-Prot
Match: Q8N2H4 (Protein SYS1 homolog OS=Homo sapiens OX=9606 GN=SYS1 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.1e-11
Identity = 52/145 (35.86%), Postives = 75/145 (51.72%), Query Frame = 0


Query: 3   PWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTATGGV------ 62
           P LI++QIV +Q  YY +LG++LA + G   S  SL   FD   +  ST  G +      
Sbjct: 12  PLLILSQIVLMQTVYYGSLGLWLALVDGLVRSSPSLDQMFDAEILGFSTPPGRLSMMSFI 71

Query: 63  ------AGYLVYLIERAKKCLDFAATLYIFHLFICIVMEGGFLNDVVGCERNWACSHVL- 122
                 A  L+Y I R K+CLDF  T++ FHL  C      F + +        C  ++ 
Sbjct: 72  LNALTCALGLLYFIRRGKQCLDFTVTVHFFHLLGCWFYSSRFPSALTWWLVQAVCIALMA 131

Query: 123 -LGEYLCIKRELREIPITRL-RSNV 133
            +GEYLC++ EL+EIP+    +SNV
Sbjct: 132 VIGEYLCMRTELKEIPLNSAPKSNV 156

[Close]

BLAST of IVF0010997 vs. ExPASy Swiss-Prot
Match: A4K2N5 (Protein SYS1 homolog OS=Papio anubis OX=9555 GN=SYS1 PE=3 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.1e-11
Identity = 52/145 (35.86%), Postives = 75/145 (51.72%), Query Frame = 0


Query: 3   PWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTATGGV------ 62
           P LI++QIV +Q  YY +LG++LA + G   S  SL   FD   +  ST  G +      
Sbjct: 12  PLLILSQIVLMQTVYYGSLGLWLALVDGLVRSSPSLDQMFDAEILGFSTPPGRLSMMSFI 71

Query: 63  ------AGYLVYLIERAKKCLDFAATLYIFHLFICIVMEGGFLNDVVGCERNWACSHVL- 122
                 A  L+Y I R K+CLDF  T++ FHL  C      F + +        C  ++ 
Sbjct: 72  LNALTCALGLLYFIRRGKQCLDFTVTVHFFHLLGCWFYSSRFPSALTWWLVQAVCIALMA 131

Query: 123 -LGEYLCIKRELREIPITRL-RSNV 133
            +GEYLC++ EL+EIP+    +SNV
Sbjct: 132 VIGEYLCMRTELKEIPLNSAPKSNV 156

[Close]

BLAST of IVF0010997 vs. ExPASy Swiss-Prot
Match: A4K2W1 (Protein SYS1 homolog OS=Pongo abelii OX=9601 GN=SYS1 PE=3 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.1e-11
Identity = 52/145 (35.86%), Postives = 75/145 (51.72%), Query Frame = 0


Query: 3   PWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTATGGV------ 62
           P LI++QIV +Q  YY +LG++LA + G   S  SL   FD   +  ST  G +      
Sbjct: 12  PLLILSQIVLMQTVYYGSLGLWLALVDGLVRSSPSLDQMFDAEILGFSTPPGRLSMMSFI 71

Query: 63  ------AGYLVYLIERAKKCLDFAATLYIFHLFICIVMEGGFLNDVVGCERNWACSHVL- 122
                 A  L+Y I R K+CLDF  T++ FHL  C      F + +        C  ++ 
Sbjct: 72  LNALTCALGLLYFIRRGKQCLDFTVTVHFFHLLGCWFYSSRFPSALTWWLVQAVCIALMA 131

Query: 123 -LGEYLCIKRELREIPITRL-RSNV 133
            +GEYLC++ EL+EIP+    +SNV
Sbjct: 132 VIGEYLCMRTELKEIPLNSAPKSNV 156

[Close]

BLAST of IVF0010997 vs. ExPASy TrEMBL
Match: A0A1S3CGS5 (Protein SYS1 homolog OS=Cucumis melo OX=3656 GN=LOC103500569 PE=3 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 2.3e-45
Identity = 111/144 (77.08%), Postives = 114/144 (79.17%), Query Frame = 0


Query: 3   PWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTATG-------- 62
           PWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTATG        
Sbjct: 10  PWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFL 69

Query: 63  ----GVAGYLVYLIERAKKCLDFAATLYIFHLFICIVMEGGFLNDVVGCERNWACSHV-- 122
                 AGYLVYLIERAKKCLDFAATLYIFHLFICIV  GG+ + +     N     V  
Sbjct: 70  LSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIVY-GGWPSSMTWWVVNGTGLVVMS 129

Query: 123 LLGEYLCIKRELREIPITRLRSNV 133
           LLGEYLCIKRELREIPITRLRSNV
Sbjct: 130 LLGEYLCIKRELREIPITRLRSNV 152

[Close]

BLAST of IVF0010997 vs. ExPASy TrEMBL
Match: A0A0A0KC23 (Protein SYS1 homolog OS=Cucumis sativus OX=3659 GN=Csa_7G446680 PE=3 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 4.4e-44
Identity = 108/144 (75.00%), Postives = 113/144 (78.47%), Query Frame = 0


Query: 3   PWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTATG-------- 62
           PWLIVAQIVCLQCFYYLTLGI LATLVGTRVSRISLVYFFDYATI+VSTATG        
Sbjct: 10  PWLIVAQIVCLQCFYYLTLGILLATLVGTRVSRISLVYFFDYATISVSTATGWCVIASFL 69

Query: 63  ----GVAGYLVYLIERAKKCLDFAATLYIFHLFICIVMEGGFLNDVVGCERNWACSHV-- 122
                 AGYLVYLIERAKKCLDFAATLYIFHLFICI+  GG+ + +     N     V  
Sbjct: 70  LSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIIY-GGWPSSMTWWVVNGTGLVVMS 129

Query: 123 LLGEYLCIKRELREIPITRLRSNV 133
           LLGEYLCIKRELREIPITRLRSNV
Sbjct: 130 LLGEYLCIKRELREIPITRLRSNV 152

[Close]

BLAST of IVF0010997 vs. ExPASy TrEMBL
Match: A0A6J1KJU0 (protein SYS1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111494664 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 2.4e-42
Identity = 105/144 (72.92%), Postives = 110/144 (76.39%), Query Frame = 0


Query: 3   PWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTATG-------- 62
           PWLIVAQIVCLQC YYLTLGIFLATLVGTRVSRISLVYFFDYAT+TVST TG        
Sbjct: 10  PWLIVAQIVCLQCLYYLTLGIFLATLVGTRVSRISLVYFFDYATLTVSTTTGLCVIASFL 69

Query: 63  ----GVAGYLVYLIERAKKCLDFAATLYIFHLFICIVMEGGFLNDVVGCERNWACSHV-- 122
                 AG+LVYLIERAKKCLDFAATLYI HLFICI   GG+ + +     N     V  
Sbjct: 70  LTALAGAGFLVYLIERAKKCLDFAATLYILHLFICIAY-GGWPSSMTWWVVNGTGLVVMS 129

Query: 123 LLGEYLCIKRELREIPITRLRSNV 133
           LLGEYLCIKRELREIPITRLRSNV
Sbjct: 130 LLGEYLCIKRELREIPITRLRSNV 152

[Close]

BLAST of IVF0010997 vs. ExPASy TrEMBL
Match: A0A6J1CPG7 (Protein SYS1 homolog OS=Momordica charantia OX=3673 GN=LOC111013526 PE=3 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 2.4e-42
Identity = 104/144 (72.22%), Postives = 111/144 (77.08%), Query Frame = 0


Query: 3   PWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTATG-------- 62
           PWLIVAQIVC+QC YY+TLGI LATLVGTRVSRISLVYFFDYATITVSTATG        
Sbjct: 10  PWLIVAQIVCIQCLYYITLGILLATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFL 69

Query: 63  ----GVAGYLVYLIERAKKCLDFAATLYIFHLFICIVMEGGFLNDVVGCERNWACSHV-- 122
                 AGYLVYLIERAKKCLDF+ATLYI HLFICI+  GG+ + +     N     V  
Sbjct: 70  LSALAGAGYLVYLIERAKKCLDFSATLYIIHLFICIIY-GGWPSSMTWWVVNGTGLVVMS 129

Query: 123 LLGEYLCIKRELREIPITRLRSNV 133
           LLGEYLCIKRELREIPITRLRSNV
Sbjct: 130 LLGEYLCIKRELREIPITRLRSNV 152

[Close]

BLAST of IVF0010997 vs. ExPASy TrEMBL
Match: A0A6J1JZ66 (Protein SYS1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111488736 PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 3.2e-42
Identity = 107/144 (74.31%), Postives = 112/144 (77.78%), Query Frame = 0


Query: 3   PWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTATG-------- 62
           PWLIVAQIVCLQC YYLTLGI +ATLVGTRVSRISLVYFFDYATITVSTATG        
Sbjct: 10  PWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFL 69

Query: 63  --GVAG--YLVYLIERAKKCLDFAATLYIFHLFICIVMEGGFLNDVVGCERNWACSHV-- 122
              +AG  YLVYLIERAKKCLDFAATLYI HLFICIV  GG+ + +     N     V  
Sbjct: 70  ISALAGAVYLVYLIERAKKCLDFAATLYILHLFICIVY-GGWPSSMTWWVVNGTGLVVMS 129

Query: 123 LLGEYLCIKRELREIPITRLRSNV 133
           LLGEYLCIKRELREIPITRLRSNV
Sbjct: 130 LLGEYLCIKRELREIPITRLRSNV 152

[Close]

BLAST of IVF0010997 vs. NCBI nr
Match: XP_008462142.1 (PREDICTED: protein SYS1 homolog [Cucumis melo])

HSP 1 Score: 190 bits (482), Expect = 2.59e-59
Identity = 111/144 (77.08%), Postives = 114/144 (79.17%), Query Frame = 0


Query: 3   PWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTATGGV------ 62
           PWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTATG        
Sbjct: 10  PWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFL 69

Query: 63  ------AGYLVYLIERAKKCLDFAATLYIFHLFICIVMEGGFLNDVVGCERNWACSHV-- 122
                 AGYLVYLIERAKKCLDFAATLYIFHLFICIV  GG+ + +     N     V  
Sbjct: 70  LSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIVY-GGWPSSMTWWVVNGTGLVVMS 129

Query: 123 LLGEYLCIKRELREIPITRLRSNV 132
           LLGEYLCIKRELREIPITRLRSNV
Sbjct: 130 LLGEYLCIKRELREIPITRLRSNV 152

[Close]

BLAST of IVF0010997 vs. NCBI nr
Match: XP_011659561.1 (protein SYS1 homolog [Cucumis sativus] >KGN45351.1 hypothetical protein Csa_016132 [Cucumis sativus])

HSP 1 Score: 186 bits (471), Expect = 1.23e-57
Identity = 108/144 (75.00%), Postives = 113/144 (78.47%), Query Frame = 0


Query: 3   PWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTATGGV------ 62
           PWLIVAQIVCLQCFYYLTLGI LATLVGTRVSRISLVYFFDYATI+VSTATG        
Sbjct: 10  PWLIVAQIVCLQCFYYLTLGILLATLVGTRVSRISLVYFFDYATISVSTATGWCVIASFL 69

Query: 63  ------AGYLVYLIERAKKCLDFAATLYIFHLFICIVMEGGFLNDVVGCERNWACSHV-- 122
                 AGYLVYLIERAKKCLDFAATLYIFHLFICI+  GG+ + +     N     V  
Sbjct: 70  LSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIIY-GGWPSSMTWWVVNGTGLVVMS 129

Query: 123 LLGEYLCIKRELREIPITRLRSNV 132
           LLGEYLCIKRELREIPITRLRSNV
Sbjct: 130 LLGEYLCIKRELREIPITRLRSNV 152

[Close]

BLAST of IVF0010997 vs. NCBI nr
Match: XP_038898906.1 (protein SYS1 homolog [Benincasa hispida])

HSP 1 Score: 185 bits (469), Expect = 2.47e-57
Identity = 108/144 (75.00%), Postives = 112/144 (77.78%), Query Frame = 0


Query: 3   PWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTATGGV------ 62
           PWLIVAQIVCLQC YYLTLGI LATLVGTRVSRISLVYFFDYATITVSTATG        
Sbjct: 10  PWLIVAQIVCLQCLYYLTLGILLATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFL 69

Query: 63  ------AGYLVYLIERAKKCLDFAATLYIFHLFICIVMEGGFLNDVVGCERNWACSHV-- 122
                 AGYLVYLIERAKKCLDFAATLYIFHLFICI+  GG+ + +     N     V  
Sbjct: 70  LSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIIY-GGWPSSMTWWVVNGTGLVVMS 129

Query: 123 LLGEYLCIKRELREIPITRLRSNV 132
           LLGEYLCIKRELREIPITRLRSNV
Sbjct: 130 LLGEYLCIKRELREIPITRLRSNV 152

[Close]

BLAST of IVF0010997 vs. NCBI nr
Match: KAG7025786.1 (Protein SYS1-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 181 bits (460), Expect = 5.79e-56
Identity = 106/144 (73.61%), Postives = 111/144 (77.08%), Query Frame = 0


Query: 3   PWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTATG-------- 62
           PWLIVAQIVCLQC YYLTLGI LATLVGTRVSRISLVYFFDYAT+TVSTATG        
Sbjct: 10  PWLIVAQIVCLQCLYYLTLGILLATLVGTRVSRISLVYFFDYATLTVSTATGLCVIASFL 69

Query: 63  ----GVAGYLVYLIERAKKCLDFAATLYIFHLFICIVMEGGFLNDVVGCERNWACSHV-- 122
                 AG+LVYLIERAKKCLDFAATLYIFHLFICI   GG+ + +     N     V  
Sbjct: 70  LTALAGAGFLVYLIERAKKCLDFAATLYIFHLFICIAY-GGWPSSMTWWVVNGTGLVVMS 129

Query: 123 LLGEYLCIKRELREIPITRLRSNV 132
           LLGEYLCIKRELREIPITRLRSNV
Sbjct: 130 LLGEYLCIKRELREIPITRLRSNV 152

[Close]

BLAST of IVF0010997 vs. NCBI nr
Match: XP_022143685.1 (protein SYS1 homolog [Momordica charantia])

HSP 1 Score: 180 bits (456), Expect = 2.35e-55
Identity = 104/144 (72.22%), Postives = 111/144 (77.08%), Query Frame = 0


Query: 3   PWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTATGGV------ 62
           PWLIVAQIVC+QC YY+TLGI LATLVGTRVSRISLVYFFDYATITVSTATG        
Sbjct: 10  PWLIVAQIVCIQCLYYITLGILLATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFL 69

Query: 63  ------AGYLVYLIERAKKCLDFAATLYIFHLFICIVMEGGFLNDVVGCERNWACSHV-- 122
                 AGYLVYLIERAKKCLDF+ATLYI HLFICI+  GG+ + +     N     V  
Sbjct: 70  LSALAGAGYLVYLIERAKKCLDFSATLYIIHLFICIIY-GGWPSSMTWWVVNGTGLVVMS 129

Query: 123 LLGEYLCIKRELREIPITRLRSNV 132
           LLGEYLCIKRELREIPITRLRSNV
Sbjct: 130 LLGEYLCIKRELREIPITRLRSNV 152

[Close]

BLAST of IVF0010997 vs. TAIR 10
Match: AT1G79990.1 (structural molecules )

HSP 1 Score: 143.3 bits (360), Expect = 1.4e-34
Identity = 81/143 (56.64%), Postives = 97/143 (67.83%), Query Frame = 0


Query: 3   PWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTATG-------- 62
           PWLIV QI+CLQC YYLTLG+F    +G RV R+SLVYFFDYAT+T ST TG        
Sbjct: 10  PWLIVGQIICLQCSYYLTLGLFTMVFLGLRVPRLSLVYFFDYATLTTSTFTGWSVIASFL 69

Query: 63  --GVAG--YLVYLIERAKKCLDFAATLYIFHLFICIVMEGGFLNDVVGCERNWACSHV-- 122
              +AG  Y+++L+ERA+KCLDF+ATLYI HLF CI M GG+ + +     N     V  
Sbjct: 70  FSSLAGAVYMIFLVERARKCLDFSATLYIIHLFFCI-MYGGWPSSMAWWVVNGTGLAVMA 129

Query: 123 LLGEYLCIKRELREIPITRLRSN 132
           LL EYLCIKRE REIP+ R  SN
Sbjct: 130 LLAEYLCIKREQREIPMDRFHSN 151

[Close]

BLAST of IVF0010997 vs. TAIR 10
Match: AT1G79990.2 (structural molecules )

HSP 1 Score: 142.5 bits (358), Expect = 2.4e-34
Identity = 81/144 (56.25%), Postives = 97/144 (67.36%), Query Frame = 0


Query: 3   PWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTATG-------- 62
           PWLIV QI+CLQC YYLTLG+F    +G RV R+SLVYFFDYAT+T ST TG        
Sbjct: 10  PWLIVGQIICLQCSYYLTLGLFTMVFLGLRVPRLSLVYFFDYATLTTSTFTGWSVIASFL 69

Query: 63  --GVAG--YLVYLIERAKKCLDFAATLYIFHLFICIVMEGGFLNDVVGCERNWACSHV-- 122
              +AG  Y+++L+ERA+KCLDF+ATLYI HLF CI M GG+ + +     N     V  
Sbjct: 70  FSSLAGAVYMIFLVERARKCLDFSATLYIIHLFFCI-MYGGWPSSMAWWVVNGTGLAVMA 129

Query: 123 LLGEYLCIKRELREIPITRLRSNV 133
           LL EYLCIKRE REIP+ R  S V
Sbjct: 130 LLAEYLCIKREQREIPMDRFHSRV 152

[Close]

BLAST of IVF0010997 vs. TAIR 10
Match: AT1G79990.4 (structural molecules )

HSP 1 Score: 142.5 bits (358), Expect = 2.4e-34
Identity = 81/144 (56.25%), Postives = 97/144 (67.36%), Query Frame = 0


Query: 3   PWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTATG-------- 62
           PWLIV QI+CLQC YYLTLG+F    +G RV R+SLVYFFDYAT+T ST TG        
Sbjct: 10  PWLIVGQIICLQCSYYLTLGLFTMVFLGLRVPRLSLVYFFDYATLTTSTFTGWSVIASFL 69

Query: 63  --GVAG--YLVYLIERAKKCLDFAATLYIFHLFICIVMEGGFLNDVVGCERNWACSHV-- 122
              +AG  Y+++L+ERA+KCLDF+ATLYI HLF CI M GG+ + +     N     V  
Sbjct: 70  FSSLAGAVYMIFLVERARKCLDFSATLYIIHLFFCI-MYGGWPSSMAWWVVNGTGLAVMA 129

Query: 123 LLGEYLCIKRELREIPITRLRSNV 133
           LL EYLCIKRE REIP+ R  S V
Sbjct: 130 LLAEYLCIKREQREIPMDRFHSRV 152

The following BLAST results are available for this feature:

BLAST of IVF0010997 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q55E69	4.3e-12	34.97	Protein SYS1 homolog OS=Dictyostelium discoideum OX=44689 GN=sys1 PE=3 SV=1	[more]
Q1RMQ3	2.1e-11	35.04	Protein SYS1 homolog OS=Bos taurus OX=9913 GN=SYS1 PE=2 SV=1	[more]
Q8N2H4	2.1e-11	35.86	Protein SYS1 homolog OS=Homo sapiens OX=9606 GN=SYS1 PE=1 SV=1	[more]
A4K2N5	2.1e-11	35.86	Protein SYS1 homolog OS=Papio anubis OX=9555 GN=SYS1 PE=3 SV=1	[more]
A4K2W1	2.1e-11	35.86	Protein SYS1 homolog OS=Pongo abelii OX=9601 GN=SYS1 PE=3 SV=1	[more]

BLAST of IVF0010997 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CGS5	2.3e-45	77.08	Protein SYS1 homolog OS=Cucumis melo OX=3656 GN=LOC103500569 PE=3 SV=1	[more]
A0A0A0KC23	4.4e-44	75.00	Protein SYS1 homolog OS=Cucumis sativus OX=3659 GN=Csa_7G446680 PE=3 SV=1	[more]
A0A6J1KJU0	2.4e-42	72.92	protein SYS1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111494664 PE=4 SV=1	[more]
A0A6J1CPG7	2.4e-42	72.22	Protein SYS1 homolog OS=Momordica charantia OX=3673 GN=LOC111013526 PE=3 SV=1	[more]
A0A6J1JZ66	3.2e-42	74.31	Protein SYS1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111488736 PE=3 SV=1	[more]

BLAST of IVF0010997 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008462142.1	2.59e-59	77.08	PREDICTED: protein SYS1 homolog [Cucumis melo]	[more]
XP_011659561.1	1.23e-57	75.00	protein SYS1 homolog [Cucumis sativus] >KGN45351.1 hypothetical protein Csa_0161...	[more]
XP_038898906.1	2.47e-57	75.00	protein SYS1 homolog [Benincasa hispida]	[more]
KAG7025786.1	5.79e-56	73.61	Protein SYS1-like protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022143685.1	2.35e-55	72.22	protein SYS1 homolog [Momordica charantia]	[more]

BLAST of IVF0010997 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G79990.1	1.4e-34	56.64	structural molecules	[more]
AT1G79990.2	2.4e-34	56.25	structural molecules	[more]
AT1G79990.4	2.4e-34	56.25	structural molecules	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019185	Integral membrane protein SYS1-related	PFAM	PF09801	SYS1	coord: 2..124 e-value: 5.2E-23 score: 81.8
IPR019185	Integral membrane protein SYS1-related	PANTHER	PTHR12952	SYS1	coord: 2..131
None	No IPR available	PANTHER	PTHR12952:SF3	PROTEIN SYS1 HOMOLOG	coord: 2..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0010997.1	IVF0010997.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006895	Golgi to endosome transport
biological_process	GO:0043001	Golgi to plasma membrane protein transport
biological_process	GO:0034067	protein localization to Golgi apparatus
cellular_component	GO:0030173	integral component of Golgi membrane
cellular_component	GO:0005802	trans-Golgi network