IVF0010983 (gene) Melon (IVF77) v1

Overview


Name	IVF0010983
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Unknown protein
Location	chr01: 14319440 .. 14319771 (+)
RNA-Seq Expression	IVF0010983
Synteny	IVF0010983

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCAGCCACCGAGTCGGTTCGTGCACCATCCTCCGTTCGCAACTCCGAGCCAAAGCGACGTCGTTTGAGCCGCTTCCGTCGTCGTCTGCTCCGATCCGTCATCACCGCCCCGTTCCGTCGTCGACCATTAGAGTTCACCGCCACCTGGTCAGCGCCGCATCGTCGAAAGATCGAGCGCTCAGTTCCATCGTGAAACCCGACCCGCGCCCTTCGCCGTTAAACTGGACCTGACCCGCGTTTCTTCTCCGCAATCCGACCCGCGCCTTCGACGCAGACAGTCGAACCCAAACCCGCGCCTACATCCGAGCCTGCTCCAGCCACCTGCGTGA

mRNA sequence

ATGAGCAGCCACCGAGTCGGTTCGTGCACCATCCTCCGTTCGCAACTCCGAGCCAAAGCGACGTCGTTTGAGCCGCTTCCGTCGTCGTCTGCTCCGATCCGTCATCACCGCCCCGTTCCGTCGTCGACCATTAGAGTTCACCGCCACCTGTTCCATCGTGAAACCCGACCCGCGCCCTTCGCCGTTAAACTGGACCTGACCCGCGTTTCTTCTCCGCAATCCGACCCGCGCCTTCGACGCAGACAGTCGAACCCAAACCCGCGCCTACATCCGAGCCTGCTCCAGCCACCTGCGTGA

Coding sequence (CDS)

ATGAGCAGCCACCGAGTCGGTTCGTGCACCATCCTCCGTTCGCAACTCCGAGCCAAAGCGACGTCGTTTGAGCCGCTTCCGTCGTCGTCTGCTCCGATCCGTCATCACCGCCCCGTTCCGTCGTCGACCATTAGAGTTCACCGCCACCTGTTCCATCGTGAAACCCGACCCGCGCCCTTCGCCGTTAAACTGGACCTGACCCGCGTTTCTTCTCCGCAATCCGACCCGCGCCTTCGACGCAGACAGTCGAACCCAAACCCGCGCCTACATCCGAGCCTGCTCCAGCCACCTGCGTGA

Protein sequence

MSSHRVGSCTILRSQLRAKATSFEPLPSSSAPIRHHRPVPSSTIRVHRHLFHRETRPAPFAVKLDLTRVSSPQSDPRLRRRQSNPNPRLHPSLLQPPA

Homology

[Close]

BLAST of IVF0010983 vs. ExPASy TrEMBL
Match: A0A5A7TGI1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold460G00800 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 9.0e-18
Identity = 59/94 (62.77%), Postives = 62/94 (65.96%), Query Frame = 0


Query: 1  MSSHRVGSCTILRSQLRAKATSFEPLPSSSAPIRHHRPVPSSTIRVHRHLFHRETRPAPF 60
          MSSHRVGSCTILRSQLRAKATSFEPLPSSSAPIRHHRPVPSSTIRVHRHL          
Sbjct: 1  MSSHRVGSCTILRSQLRAKATSFEPLPSSSAPIRHHRPVPSSTIRVHRHL---------- 60

Query: 61 AVKLDLTRVSSPQSDPRLRRRQSNPNPRLHPSLL 95
                  VS+  S  R       P+PR  P+ L
Sbjct: 61 --------VSAASSKDRALSSIVKPDPRPSPTSL 76

[Close]

BLAST of IVF0010983 vs. ExPASy TrEMBL
Match: A0A5D3DID0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G003960 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 3.4e-17
Identity = 58/94 (61.70%), Postives = 61/94 (64.89%), Query Frame = 0


Query: 1  MSSHRVGSCTILRSQLRAKATSFEPLPSSSAPIRHHRPVPSSTIRVHRHLFHRETRPAPF 60
          MSSHRVG CTILRSQLRAKATSFEPLPSSSAPIRHHRPVPSSTIRVHRHL          
Sbjct: 1  MSSHRVGPCTILRSQLRAKATSFEPLPSSSAPIRHHRPVPSSTIRVHRHL---------- 60

Query: 61 AVKLDLTRVSSPQSDPRLRRRQSNPNPRLHPSLL 95
                  VS+  S  R       P+PR  P+ L
Sbjct: 61 --------VSAASSKDRALSSIVKPDPRPSPTSL 76

[Close]

BLAST of IVF0010983 vs. ExPASy TrEMBL
Match: A0A5A7UNZ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G001610 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.8e-05
Identity = 40/77 (51.95%), Postives = 45/77 (58.44%), Query Frame = 0


Query: 1   MSSHRVGSCTILRSQLRAKATSFEPLPSSSAPIRHHRPVPSSTI-------RVHRH---- 60
           +SS RVG C ILRSQLRA+ATSFE L SSS PIRH  P+P S +          RH    
Sbjct: 26  VSSRRVGLCAILRSQLRAEATSFELLSSSSTPIRH--PLPRSVVDHWSSPPPGQRHSLED 85

Query: 61  ---LFHRETRPAPFAVK 64
                 RETR APF+ K
Sbjct: 86  RVLSLRRETRTAPFSAK 100

[Close]

BLAST of IVF0010983 vs. ExPASy TrEMBL
Match: A0A5D3DVJ9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold225G00350 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.8e-05
Identity = 40/77 (51.95%), Postives = 45/77 (58.44%), Query Frame = 0


Query: 1   MSSHRVGSCTILRSQLRAKATSFEPLPSSSAPIRHHRPVPSSTI-------RVHRH---- 60
           +SS RVG C ILRSQLRA+ATSFE L SSS PIRH  P+P S +          RH    
Sbjct: 26  VSSRRVGLCAILRSQLRAEATSFELLSSSSTPIRH--PLPRSVVDHWSSPPPGQRHSLED 85

Query: 61  ---LFHRETRPAPFAVK 64
                 RETR APF+ K
Sbjct: 86  RVLSLRRETRTAPFSAK 100

[Close]

BLAST of IVF0010983 vs. NCBI nr
Match: KAA0040369.1 (hypothetical protein E6C27_scaffold460G00800 [Cucumis melo var. makuwa])

HSP 1 Score: 99.0 bits (245), Expect = 1.08e-23
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0


Query: 1  MSSHRVGSCTILRSQLRAKATSFEPLPSSSAPIRHHRPVPSSTIRVHRHL 50
          MSSHRVGSCTILRSQLRAKATSFEPLPSSSAPIRHHRPVPSSTIRVHRHL
Sbjct: 1  MSSHRVGSCTILRSQLRAKATSFEPLPSSSAPIRHHRPVPSSTIRVHRHL 50

[Close]

BLAST of IVF0010983 vs. NCBI nr
Match: TYK23335.1 (hypothetical protein E5676_scaffold142G003960 [Cucumis melo var. makuwa])

HSP 1 Score: 97.1 bits (240), Expect = 6.15e-23
Identity = 49/50 (98.00%), Postives = 49/50 (98.00%), Query Frame = 0


Query: 1  MSSHRVGSCTILRSQLRAKATSFEPLPSSSAPIRHHRPVPSSTIRVHRHL 50
          MSSHRVG CTILRSQLRAKATSFEPLPSSSAPIRHHRPVPSSTIRVHRHL
Sbjct: 1  MSSHRVGPCTILRSQLRAKATSFEPLPSSSAPIRHHRPVPSSTIRVHRHL 50

[Close]

BLAST of IVF0010983 vs. NCBI nr
Match: KAA0056016.1 (hypothetical protein E6C27_scaffold319G001610 [Cucumis melo var. makuwa])

HSP 1 Score: 55.8 bits (133), Expect = 9.80e-07
Identity = 40/77 (51.95%), Postives = 45/77 (58.44%), Query Frame = 0


Query: 1   MSSHRVGSCTILRSQLRAKATSFEPLPSSSAPIRHHRPVPSSTIRV-------HRHLFH- 60
           +SS RVG C ILRSQLRA+ATSFE L SSS PIRH  P+P S +          RH    
Sbjct: 26  VSSRRVGLCAILRSQLRAEATSFELLSSSSTPIRH--PLPRSVVDHWSSPPPGQRHSLED 85

Query: 61  ------RETRPAPFAVK 63
                 RETR APF+ K
Sbjct: 86  RVLSLRRETRTAPFSAK 100

[Close]

BLAST of IVF0010983 vs. NCBI nr
Match: TYK27703.1 (hypothetical protein E5676_scaffold225G00350 [Cucumis melo var. makuwa])

HSP 1 Score: 55.8 bits (133), Expect = 9.80e-07
Identity = 40/77 (51.95%), Postives = 45/77 (58.44%), Query Frame = 0


Query: 1   MSSHRVGSCTILRSQLRAKATSFEPLPSSSAPIRHHRPVPSSTIRV-------HRHLFH- 60
           +SS RVG C ILRSQLRA+ATSFE L SSS PIRH  P+P S +          RH    
Sbjct: 26  VSSRRVGLCAILRSQLRAEATSFELLSSSSTPIRH--PLPRSVVDHWSSPPPGQRHSLED 85

Query: 61  ------RETRPAPFAVK 63
                 RETR APF+ K
Sbjct: 86  RVLSLRRETRTAPFSAK 100

The following BLAST results are available for this feature:

BLAST of IVF0010983 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0010983 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TGI1	9.0e-18	62.77	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3DID0	3.4e-17	61.70	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UNZ4	1.8e-05	51.95	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3DVJ9	1.8e-05	51.95	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of IVF0010983 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0040369.1	1.08e-23	100.00	hypothetical protein E6C27_scaffold460G00800 [Cucumis melo var. makuwa]	[more]
TYK23335.1	6.15e-23	98.00	hypothetical protein E5676_scaffold142G003960 [Cucumis melo var. makuwa]	[more]
KAA0056016.1	9.80e-07	51.95	hypothetical protein E6C27_scaffold319G001610 [Cucumis melo var. makuwa]	[more]
TYK27703.1	9.80e-07	51.95	hypothetical protein E5676_scaffold225G00350 [Cucumis melo var. makuwa]	[more]

BLAST of IVF0010983 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0010983.1	IVF0010983.1	mRNA