IVF0010879 (gene) Melon (IVF77) v1

Overview
NameIVF0010879
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionAcyl-CoA-binding domain-containing protein 4
Locationchr12: 13993040 .. 13993267 (-)
RNA-Seq ExpressionIVF0010879
SyntenyIVF0010879
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGCGATGGTGAGGGCGAGCTCCGGCTTGCAATATCCCGATCGGTTCTACGCCGTGGCTTCTTATGTCGGTTTTGATGGATCATCGAAATTGTCTTCAAAGGCCCTCAGGTCTAAGTTCTCTGATGAGGCCACTTTGTTACTCTATGGCTTGTATCAGCAGGTACTACCACGTGTTCTTACACCTGTGACTTACCGGTGCTGTTTCAGTTTGGTTGAGGTTTGA

mRNA sequence

ATGGTTGCGATGGTGAGGGCGAGCTCCGGCTTGCAATATCCCGATCGGTTCTACGCCGTGGCTTCTTATGTCGGTTTTGATGGATCATCGAAATTGTCTTCAAAGGCCCTCAGGTCTAAGTTCTCTGATGAGGCCACTTTGTTACTCTATGGCTTGTATCAGCAGGTACTACCACGTGTTCTTACACCTGTGACTTACCGGTGCTGTTTCAGTTTGGTTGAGGTTTGA

Coding sequence (CDS)

ATGGTTGCGATGGTGAGGGCGAGCTCCGGCTTGCAATATCCCGATCGGTTCTACGCCGTGGCTTCTTATGTCGGTTTTGATGGATCATCGAAATTGTCTTCAAAGGCCCTCAGGTCTAAGTTCTCTGATGAGGCCACTTTGTTACTCTATGGCTTGTATCAGCAGGTACTACCACGTGTTCTTACACCTGTGACTTACCGGTGCTGTTTCAGTTTGGTTGAGGTTTGA

Protein sequence

MVAMVRASSGLQYPDRFYAVASYVGFDGSSKLSSKALRSKFSDEATLLLYGLYQQVLPRVLTPVTYRCCFSLVEV
Homology
[Close]
BLAST of IVF0010879 vs. ExPASy Swiss-Prot
Match: Q8RWD9 (Acyl-CoA-binding domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=ACBP5 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 1.6e-11
Identity = 37/55 (67.27%), Postives = 42/55 (76.36%), Query Frame = 0 

Query: 1  MVAMVRASSGLQYPDRFYAVASYVGFDGSSKLSSKALRSKFSDEATLLLYGLYQQ 56
          M  MVRASSGL YP+RFYA ASYVG DGS   S K L SKFS++ +LLLY L+QQ
Sbjct: 1  MAHMVRASSGLSYPERFYAAASYVGLDGSQS-SVKQLSSKFSNDTSLLLYTLHQQ 54

[Close]
BLAST of IVF0010879 vs. ExPASy Swiss-Prot
Match: Q9MA55 (Acyl-CoA-binding domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=ACBP4 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 3.9e-10
Identity = 34/54 (62.96%), Postives = 40/54 (74.07%), Query Frame = 0 

Query: 2  VAMVRASSGLQYPDRFYAVASYVGFDGSSKLSSKALRSKFSDEATLLLYGLYQQ 56
          +AM RA+SG  YP+RFYA ASYVG DGS   S+K + SKF D+  LLLY LYQQ
Sbjct: 1  MAMPRATSGPAYPERFYAAASYVGLDGSDS-SAKNVISKFPDDTALLLYALYQQ 53

[Close]
BLAST of IVF0010879 vs. ExPASy Swiss-Prot
Match: Q75LJ4 (Acyl-CoA-binding domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=ACBP6 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 9.6e-09
Identity = 34/66 (51.52%), Postives = 39/66 (59.09%), Query Frame = 0 

Query: 7  ASSGLQYPDRFYAVASYVGFDGSSKLSSKALRSKFSDEATLLLYGLYQQVL--------P 65
          ASSGL YPDRFYA A+Y GF      SS A+ S+F ++  LLLYGLYQQ          P
Sbjct: 2  ASSGLAYPDRFYAAAAYAGFGAGGATSSSAI-SRFQNDVALLLYGLYQQATVGPCNVPKP 61

[Close]
BLAST of IVF0010879 vs. ExPASy TrEMBL
Match: A0A5D3E5D6 (Acyl-CoA-binding domain-containing protein 4 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold30706G00010 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.7e-32
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0 

Query: 1  MVAMVRASSGLQYPDRFYAVASYVGFDGSSKLSSKALRSKFSDEATLLLYGLYQQVLPRV 60
          MVAMVRASSGLQYPDRFYAVASYVGFDGSSKLSSKALRSKFSDEATLLLYGLYQQVLPRV
Sbjct: 1  MVAMVRASSGLQYPDRFYAVASYVGFDGSSKLSSKALRSKFSDEATLLLYGLYQQVLPRV 60

Query: 61 LTPVTYRCCFSLVEV 76
          LTPVTYRCCFSLVEV
Sbjct: 61 LTPVTYRCCFSLVEV 75

[Close]
BLAST of IVF0010879 vs. ExPASy TrEMBL
Match: A0A5A7TGN5 (O-fucosyltransferase family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold795G001170 PE=3 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 3.8e-32
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0 

Query: 1  MVAMVRASSGLQYPDRFYAVASYVGFDGSSKLSSKALRSKFSDEATLLLYGLYQQVLPRV 60
          MVAMVRASSGLQYPDRFYAVASYVGFDGSSKLSSKALRSKFSDEATLLLYGLYQQVLPRV
Sbjct: 1  MVAMVRASSGLQYPDRFYAVASYVGFDGSSKLSSKALRSKFSDEATLLLYGLYQQVLPRV 60

Query: 61 LTPVTYRCCFSLVE 75
          LTPVTYRCCFSLVE
Sbjct: 61 LTPVTYRCCFSLVE 74

[Close]
BLAST of IVF0010879 vs. ExPASy TrEMBL
Match: A0A5D3CJT5 (Acyl-CoA-binding domain-containing protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold828G00570 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.3e-29
Identity = 69/74 (93.24%), Postives = 69/74 (93.24%), Query Frame = 0 

Query: 1  MVAMVRASSGLQYPDRFYAVASYVGFDGSSKLSSKALRSKFSDEATLLLYGLYQQVLPRV 60
          M AMVRASSGLQYPDRFYA ASY GFDGS KLSSKALRSKFSDEA LLLYGLYQQVLPRV
Sbjct: 1  MAAMVRASSGLQYPDRFYAAASYAGFDGSPKLSSKALRSKFSDEAALLLYGLYQQVLPRV 60

Query: 61 LTPVTYRCCFSLVE 75
          LTPVTYRCCFSLVE
Sbjct: 61 LTPVTYRCCFSLVE 74

[Close]
BLAST of IVF0010879 vs. ExPASy TrEMBL
Match: A0A5D3C6F7 (Acyl-CoA-binding domain-containing protein 4 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G002100 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 3.9e-29
Identity = 68/74 (91.89%), Postives = 68/74 (91.89%), Query Frame = 0 

Query: 1  MVAMVRASSGLQYPDRFYAVASYVGFDGSSKLSSKALRSKFSDEATLLLYGLYQQVLPRV 60
          M  MVRASSGLQYPDRFYA ASY GFDGS KLSSKALRSKFSDEA LLLYGLYQQVLPRV
Sbjct: 1  MAVMVRASSGLQYPDRFYAAASYAGFDGSPKLSSKALRSKFSDEAALLLYGLYQQVLPRV 60

Query: 61 LTPVTYRCCFSLVE 75
          LTPVTYRCCFSLVE
Sbjct: 61 LTPVTYRCCFSLVE 74

[Close]
BLAST of IVF0010879 vs. ExPASy TrEMBL
Match: A0A5A7VFV5 (Acyl-CoA-binding domain-containing protein 4 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold979G00450 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 3.9e-29
Identity = 68/74 (91.89%), Postives = 69/74 (93.24%), Query Frame = 0 

Query: 1  MVAMVRASSGLQYPDRFYAVASYVGFDGSSKLSSKALRSKFSDEATLLLYGLYQQVLPRV 60
          M AMVRASSGLQYPDRFYA ASY GFDGS KLSSKALRSKFSDEA LLLYGLYQQVLPRV
Sbjct: 1  MAAMVRASSGLQYPDRFYAAASYAGFDGSPKLSSKALRSKFSDEAALLLYGLYQQVLPRV 60

Query: 61 LTPVTYRCCFSLVE 75
          LTPVTY+CCFSLVE
Sbjct: 61 LTPVTYQCCFSLVE 74

[Close]
BLAST of IVF0010879 vs. NCBI nr
Match: TYK30810.1 (acyl-CoA-binding domain-containing protein 4 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 149 bits (377), Expect = 2.33e-45
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0 

Query: 1  MVAMVRASSGLQYPDRFYAVASYVGFDGSSKLSSKALRSKFSDEATLLLYGLYQQVLPRV 60
          MVAMVRASSGLQYPDRFYAVASYVGFDGSSKLSSKALRSKFSDEATLLLYGLYQQVLPRV
Sbjct: 1  MVAMVRASSGLQYPDRFYAVASYVGFDGSSKLSSKALRSKFSDEATLLLYGLYQQVLPRV 60

Query: 61 LTPVTYRCCFSLVEV 75
          LTPVTYRCCFSLVEV
Sbjct: 61 LTPVTYRCCFSLVEV 75

[Close]
BLAST of IVF0010879 vs. NCBI nr
Match: KAA0042393.1 (uncharacterized protein E6C27_scaffold795G001170 [Cucumis melo var. makuwa])

HSP 1 Score: 148 bits (374), Expect = 3.20e-43
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0 

Query: 1  MVAMVRASSGLQYPDRFYAVASYVGFDGSSKLSSKALRSKFSDEATLLLYGLYQQVLPRV 60
          MVAMVRASSGLQYPDRFYAVASYVGFDGSSKLSSKALRSKFSDEATLLLYGLYQQVLPRV
Sbjct: 1  MVAMVRASSGLQYPDRFYAVASYVGFDGSSKLSSKALRSKFSDEATLLLYGLYQQVLPRV 60

Query: 61 LTPVTYRCCFSLVE 74
          LTPVTYRCCFSLVE
Sbjct: 61 LTPVTYRCCFSLVE 74

[Close]
BLAST of IVF0010879 vs. NCBI nr
Match: KAA0063418.1 (acyl-CoA-binding domain-containing protein 4 [Cucumis melo var. makuwa] >TYK11680.1 acyl-CoA-binding domain-containing protein 4 [Cucumis melo var. makuwa])

HSP 1 Score: 140 bits (352), Expect = 9.26e-41
Identity = 69/74 (93.24%), Postives = 69/74 (93.24%), Query Frame = 0 

Query: 1  MVAMVRASSGLQYPDRFYAVASYVGFDGSSKLSSKALRSKFSDEATLLLYGLYQQVLPRV 60
          M AMVRASSGLQYPDRFYA ASY GFDGS KLSSKALRSKFSDEA LLLYGLYQQVLPRV
Sbjct: 1  MAAMVRASSGLQYPDRFYAAASYAGFDGSPKLSSKALRSKFSDEAALLLYGLYQQVLPRV 60

Query: 61 LTPVTYRCCFSLVE 74
          LTPVTYRCCFSLVE
Sbjct: 61 LTPVTYRCCFSLVE 74

[Close]
BLAST of IVF0010879 vs. NCBI nr
Match: KAA0025187.1 (acyl-CoA-binding domain-containing protein 4 isoform X2 [Cucumis melo var. makuwa] >TYK07477.1 acyl-CoA-binding domain-containing protein 4 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 138 bits (348), Expect = 1.15e-40
Identity = 68/74 (91.89%), Postives = 68/74 (91.89%), Query Frame = 0 

Query: 1  MVAMVRASSGLQYPDRFYAVASYVGFDGSSKLSSKALRSKFSDEATLLLYGLYQQVLPRV 60
          M  MVRASSGLQYPDRFYA ASY GFDGS KLSSKALRSKFSDEA LLLYGLYQQVLPRV
Sbjct: 1  MAVMVRASSGLQYPDRFYAAASYAGFDGSPKLSSKALRSKFSDEAALLLYGLYQQVLPRV 60

Query: 61 LTPVTYRCCFSLVE 74
          LTPVTYRCCFSLVE
Sbjct: 61 LTPVTYRCCFSLVE 74

[Close]
BLAST of IVF0010879 vs. NCBI nr
Match: KAA0031885.1 (acyl-CoA-binding domain-containing protein 4 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 138 bits (348), Expect = 2.61e-40
Identity = 68/74 (91.89%), Postives = 68/74 (91.89%), Query Frame = 0 

Query: 1  MVAMVRASSGLQYPDRFYAVASYVGFDGSSKLSSKALRSKFSDEATLLLYGLYQQVLPRV 60
          M AMVRASSGLQYPDRFYA ASY GFDGS KLSSKALRSKFSDEA LLLYGLYQQVLPR 
Sbjct: 1  MAAMVRASSGLQYPDRFYAAASYAGFDGSPKLSSKALRSKFSDEAALLLYGLYQQVLPRA 60

Query: 61 LTPVTYRCCFSLVE 74
          LTPVTYRCCFSLVE
Sbjct: 61 LTPVTYRCCFSLVE 74

[Close]
BLAST of IVF0010879 vs. TAIR 10
Match: AT5G27630.1 (acyl-CoA binding protein 5 )

HSP 1 Score: 69.7 bits (169), Expect = 1.1e-12
Identity = 37/55 (67.27%), Postives = 42/55 (76.36%), Query Frame = 0 

Query: 1  MVAMVRASSGLQYPDRFYAVASYVGFDGSSKLSSKALRSKFSDEATLLLYGLYQQ 56
          M  MVRASSGL YP+RFYA ASYVG DGS   S K L SKFS++ +LLLY L+QQ
Sbjct: 1  MAHMVRASSGLSYPERFYAAASYVGLDGSQS-SVKQLSSKFSNDTSLLLYTLHQQ 54

[Close]
BLAST of IVF0010879 vs. TAIR 10
Match: AT3G05420.1 (acyl-CoA binding protein 4 )

HSP 1 Score: 65.1 bits (157), Expect = 2.8e-11
Identity = 34/54 (62.96%), Postives = 40/54 (74.07%), Query Frame = 0 

Query: 2  VAMVRASSGLQYPDRFYAVASYVGFDGSSKLSSKALRSKFSDEATLLLYGLYQQ 56
          +AM RA+SG  YP+RFYA ASYVG DGS   S+K + SKF D+  LLLY LYQQ
Sbjct: 1  MAMPRATSGPAYPERFYAAASYVGLDGSDS-SAKNVISKFPDDTALLLYALYQQ 53

[Close]
BLAST of IVF0010879 vs. TAIR 10
Match: AT3G05420.2 (acyl-CoA binding protein 4 )

HSP 1 Score: 65.1 bits (157), Expect = 2.8e-11
Identity = 34/54 (62.96%), Postives = 40/54 (74.07%), Query Frame = 0 

Query: 2  VAMVRASSGLQYPDRFYAVASYVGFDGSSKLSSKALRSKFSDEATLLLYGLYQQ 56
          +AM RA+SG  YP+RFYA ASYVG DGS   S+K + SKF D+  LLLY LYQQ
Sbjct: 1  MAMPRATSGPAYPERFYAAASYVGLDGSDS-SAKNVISKFPDDTALLLYALYQQ 53

The following BLAST results are available for this feature:
BLAST of IVF0010879 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8RWD91.6e-1167.27Acyl-CoA-binding domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=... [more]
Q9MA553.9e-1062.96Acyl-CoA-binding domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=... [more]
Q75LJ49.6e-0951.52Acyl-CoA-binding domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=... [more]
BLAST of IVF0010879 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3E5D61.7e-32100.00Acyl-CoA-binding domain-containing protein 4 isoform X2 OS=Cucumis melo var. mak... [more]
A0A5A7TGN53.8e-32100.00O-fucosyltransferase family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6... [more]
A0A5D3CJT51.3e-2993.24Acyl-CoA-binding domain-containing protein 4 OS=Cucumis melo var. makuwa OX=1194... [more]
A0A5D3C6F73.9e-2991.89Acyl-CoA-binding domain-containing protein 4 isoform X2 OS=Cucumis melo var. mak... [more]
A0A5A7VFV53.9e-2991.89Acyl-CoA-binding domain-containing protein 4 isoform X2 OS=Cucumis melo var. mak... [more]
BLAST of IVF0010879 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK30810.12.33e-45100.00acyl-CoA-binding domain-containing protein 4 isoform X2 [Cucumis melo var. makuw... [more]
KAA0042393.13.20e-43100.00uncharacterized protein E6C27_scaffold795G001170 [Cucumis melo var. makuwa][more]
KAA0063418.19.26e-4193.24acyl-CoA-binding domain-containing protein 4 [Cucumis melo var. makuwa] >TYK1168... [more]
KAA0025187.11.15e-4091.89acyl-CoA-binding domain-containing protein 4 isoform X2 [Cucumis melo var. makuw... [more]
KAA0031885.12.61e-4091.89acyl-CoA-binding domain-containing protein 4 isoform X2 [Cucumis melo var. makuw... [more]
BLAST of IVF0010879 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G27630.11.1e-1267.27acyl-CoA binding protein 5 [more]
AT3G05420.12.8e-1162.96acyl-CoA binding protein 4 [more]
AT3G05420.22.8e-1162.96acyl-CoA binding protein 4 [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0010879.2IVF0010879.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006004 fucose metabolic process
biological_process GO:0006869 lipid transport
cellular_component GO:0005829 cytosol
molecular_function GO:0000062 fatty-acyl-CoA binding
molecular_function GO:0008289 lipid binding
molecular_function GO:0016740 transferase activity