IVF0010866 (gene) Melon (IVF77) v1

Overview


Name	IVF0010866
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	40S ribosomal S3-like protein
Location	chr05: 26599674 .. 26602457 (-)
RNA-Seq Expression	IVF0010866
Synteny	IVF0010866

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTGTTGGGCCGTATCTAAAAACCAATCGCCTCCGTTCATCTTGGAAACCCTAGATCCAATTTTGCTATCACAATCTCATAACATTTGCATGCAGCCATATAAAGTTCAATCCGCGGCAGCGCGGCACAGAGGCTTCCCTTCCCACATCTTAGATCTTTTTGAGCGGCTTCATTGCTCTCTTTCCAGCCTCTCTTTGAATATGGCGACCCAGATGAGTAAGAAGAGAAAGGTCAGTACACAAATTTTCTCGATCTGTACTTTTTTCCTCCCATTATCTGCAACGATTGACCTCTTTCATCTTCTATTGATTGTTTTTTCTTTTCGATTTTGTTTCAGTTCGTAGCCGATGGAGTGTTTTTTGCCGAGCTAAACGAGGTTTTGACCCGAGAGTTGGCAGAGGATGGGTACTCCGGTGTCGAGGTTAGAGTCACTCCTATGCGCACTGAGATCATCATCCGAGCCACCCGCACCCAAAACGTTCTCGGTCAGTTTACTTTCATTTATAAATTCAATTGATTAAAGTTATTTGAACAACCTACCTTATTCATTCATTGGACTTAACGTATTGGATTAACGTTCGCACTTTTTCTGTTATATAGGTGAAAAAGGTAGGAGGATTAGGGAGCTAACCTCTGTTGTGCAGAAGCGGTTCAAGTTTCCGGAGAACAGTGTTGAGCTTTATGCCGAGAAAGTTAACAATAGAGGGCTTTGTGCCATTGCCCAAGCCGAGTCACTTCGTTATAAGCTACTTGGTGGCCTTGCTGTTCGTAGGTACTTTTTCGTTTTTCTTCCCATAACTACTAGTAGCATTATTTTTATTAATTTAAATTGAAATGGGAATATTATTTACGATTATGAAAGAATAAAAATCACAGAAATCTTATTTCTAGCGCAAATCTTTGACATCTTGTTTAAAATGCAGTATTTGACTAACTATATAAAATCTCACCCAATGGGAGCTTCGTTTTAGATTCATAAAAATGGTTTCCTTTTCTTGGATTTGTGATTACGTCATCTACAAAGCAGATTGGTTTTTTGGTACCAACCTCGTGTCGGAAGGTGACAATATAAATTGAGCTCTTCCATTTGTTAATCGTTGTGGAATCATTTTGTTTCACACTGTAACCTTAGGGAAGATACATGCGCTTCCTGGTAGTATCTTTAGTCTCTTCTTGTCACATTATTTTTGGAGGCTAAAGATAGTATTGAGACGTTTTCTTAAAATAGGTGAGAACTAAGTCTCAATATTAGTCAATATAAACTATACTGATAATAAGAACGTATAATCCAGTTTTGTCCAGCACAATGTTTGTAGGAAAGTACTTGCAGGTAACACCTATCAACTAACACTTTCTTGTAAACAGATTCTACAAGGTTAGTCTCAATTCTCTGGTAGCAAGGAAGCGTGGTCTGTGCTTGAAAAGGAATCTTCTAGTTTTTTTCCCCTTGTGTGCGTGTGTGCGTTCTTTCTTAAATTTTCGGCAGGGGACATTCATACATGTCTTCCTATGAAAATCTACAAGAGAAGAACTGCATTCCACCTTGTCCGCATTTTAAGCCTACTGTCCGCCCCAATACTTATCTTACCATGAACGTCCCTATAATTTAATCCAATCTTGGAAACCCATTTGACATATAAATTAAAATCACTAGGCAGTGTATACACCGATCAAAGCTCACTGATGTGCTACAAGTCAACTCTCGAGTTTCCGTTTTGTTTAATCTACATGTTTTTTTCTAATCCAAAGTATTCAATGTCAACTTTTTTCAAGTTTTTGTGTTCATATTATCTGTTAGACAGTCTAAATGTTTATATATGTACTTCTTCCATCAGGGCATGCTATGGTGTTCTGAGATTCGTCATGGAAAGTGGAGCGAAGGGTTGTGAGGTTAGTTTGTAGCTCAATCCGCTATTATTATCAACATATGAAAAAATTGTATAGCTATGTTAACATGCAATTTGTAAATCGCAACAGGTGATTGTTAGTGGAAAACTCAGGGCACAGCGTGCAAAATCTATGAAGTTCAAAGATGGATATATGATCTCTTCGGGTCAACCAGTCAGAGATTATATTGACTCGGCTGTTAGACATGTTCTTCTCAGACAGGTTAGCCTCGAGTATTAATATATAGAACAATTGCTTACACAATACATCCGTCACTCTGTTAATGTTATTTTGTTTTTCTGGCTCAGGGAGTTCTTGGTATTAAAGTTAAGATCATGCTTGATTGGGATCCTAAGGGCAAGCAAGGCCCTACCACCCCTCTTCCTGATGTCGTCACAATCCACTCTCCCAAGGAGGAAGAAGAAATCGTCCATAGACCACCAGCAGTTTTGACCGCTGATATTGAGGTTCCAGTAGCAGTACCACCAGTACCAGTAGCTTGAGAGGGCTCTATTCTAGATATTAATGTATGGAATCAATCATCGTCCATTTTGTACTTTCTTTCCCAAAGATTTCGTTATGTCTCAGTGATCTGTTGGTTTGGGCCTCCCGACTGCAGAGCGTTCTTTTGATAATCGAACAAAATGCATATGGAGAACAGTCTTTTTGAGATATTAATTTTCAATTTTTGCCTAATGATTATTTATTCTGAACCCTGTTTGAACTAAATCCCATCTTTTAGGTGCATACTTTCGTCAAGGACTTGACATTTGACTGCCATTTATTTTGTATTTTTTAGTACATTTGAGCTTATAATTGTATTATGTTTTTCAATGCTTTGGAAGAGCATTATTAGATATAATGTCAGACAGGTATGTCCTTTGTTTGATGCTTCAA

mRNA sequence

CTTGTTGGGCCGTATCTAAAAACCAATCGCCTCCGTTCATCTTGGAAACCCTAGATCCAATTTTGCTATCACAATCTCATAACATTTGCATGCAGCCATATAAAGTTCAATCCGCGGCAGCGCGGCACAGAGGCTTCCCTTCCCACATCTTAGATCTTTTTGAGCGGCTTCATTGCTCTCTTTCCAGCCTCTCTTTGAATATGGCGACCCAGATGAGTAAGAAGAGAAAGTTCGTAGCCGATGGAGTGTTTTTTGCCGAGCTAAACGAGGTTTTGACCCGAGAGTTGGCAGAGGATGGGTACTCCGGTGTCGAGGTTAGAGTCACTCCTATGCGCACTGAGATCATCATCCGAGCCACCCGCACCCAAAACGTTCTCGGTGAAAAAGGTAGGAGGATTAGGGAGCTAACCTCTGTTGTGCAGAAGCGGTTCAAGTTTCCGGAGAACAGTGTTGAGCTTTATGCCGAGAAAGTTAACAATAGAGGGCTTTGTGCCATTGCCCAAGCCGAGTCACTTCGTTATAAGCTACTTGGTGGCCTTGCTGTTCGTAGGGCATGCTATGGTGTTCTGAGATTCGTCATGGAAAGTGGAGCGAAGGGTTGTGAGGTGATTGTTAGTGGAAAACTCAGGGCACAGCGTGCAAAATCTATGAAGTTCAAAGATGGATATATGATCTCTTCGGGTCAACCAGTCAGAGATTATATTGACTCGGCTGTTAGACATGTTCTTCTCAGACAGGGAGTTCTTGGTATTAAAGTTAAGATCATGCTTGATTGGGATCCTAAGGGCAAGCAAGGCCCTACCACCCCTCTTCCTGATGTCGTCACAATCCACTCTCCCAAGGAGGAAGAAGAAATCGTCCATAGACCACCAGCAGTTTTGACCGCTGATATTGAGGTTCCAGTAGCAGTACCACCAGTACCAGTAGCTTGAGAGGGCTCTATTCTAGATATTAATGTATGGAATCAATCATCGTCCATTTTGTACTTTCTTTCCCAAAGATTTCGTTATGTCTCAGTGATCTGTTGGTTTGGGCCTCCCGACTGCAGAGCGTTCTTTTGATAATCGAACAAAATGCATATGGAGAACAGTCTTTTTGAGATATTAATTTTCAATTTTTGCCTAATGATTATTTATTCTGAACCCTGTTTGAACTAAATCCCATCTTTTAGGTGCATACTTTCGTCAAGGACTTGACATTTGACTGCCATTTATTTTGTATTTTTTAGTACATTTGAGCTTATAATTGTATTATGTTTTTCAATGCTTTGGAAGAGCATTATTAGATATAATGTCAGACAGGTATGTCCTTTGTTTGATGCTTCAA

Coding sequence (CDS)

ATGCAGCCATATAAAGTTCAATCCGCGGCAGCGCGGCACAGAGGCTTCCCTTCCCACATCTTAGATCTTTTTGAGCGGCTTCATTGCTCTCTTTCCAGCCTCTCTTTGAATATGGCGACCCAGATGAGTAAGAAGAGAAAGTTCGTAGCCGATGGAGTGTTTTTTGCCGAGCTAAACGAGGTTTTGACCCGAGAGTTGGCAGAGGATGGGTACTCCGGTGTCGAGGTTAGAGTCACTCCTATGCGCACTGAGATCATCATCCGAGCCACCCGCACCCAAAACGTTCTCGGTGAAAAAGGTAGGAGGATTAGGGAGCTAACCTCTGTTGTGCAGAAGCGGTTCAAGTTTCCGGAGAACAGTGTTGAGCTTTATGCCGAGAAAGTTAACAATAGAGGGCTTTGTGCCATTGCCCAAGCCGAGTCACTTCGTTATAAGCTACTTGGTGGCCTTGCTGTTCGTAGGGCATGCTATGGTGTTCTGAGATTCGTCATGGAAAGTGGAGCGAAGGGTTGTGAGGTGATTGTTAGTGGAAAACTCAGGGCACAGCGTGCAAAATCTATGAAGTTCAAAGATGGATATATGATCTCTTCGGGTCAACCAGTCAGAGATTATATTGACTCGGCTGTTAGACATGTTCTTCTCAGACAGGGAGTTCTTGGTATTAAAGTTAAGATCATGCTTGATTGGGATCCTAAGGGCAAGCAAGGCCCTACCACCCCTCTTCCTGATGTCGTCACAATCCACTCTCCCAAGGAGGAAGAAGAAATCGTCCATAGACCACCAGCAGTTTTGACCGCTGATATTGAGGTTCCAGTAGCAGTACCACCAGTACCAGTAGCTTGA

Protein sequence

MQPYKVQSAAARHRGFPSHILDLFERLHCSLSSLSLNMATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTADIEVPVAVPPVPVA

Homology

[Close]

BLAST of IVF0010866 vs. ExPASy Swiss-Prot
Match: Q9M339 (40S ribosomal protein S3-2 OS=Arabidopsis thaliana OX=3702 GN=RPS3B PE=1 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 4.3e-110
Identity = 209/247 (84.62%), Postives = 220/247 (89.07%), Query Frame = 0


Query: 38  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 97
           M TQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MTTQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 98  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 157
           EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 158 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 217
           GVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQG 180

Query: 218 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVH----RPPAVLTAD-----I 276
           VLGIKVK+MLDWDPKG  GP TPLPDVV IHSPKEEE I        PA L AD     +
Sbjct: 181 VLGIKVKVMLDWDPKGISGPKTPLPDVVIIHSPKEEEAIYAPAQVAAPAALVADAPLTAV 240

[Close]

BLAST of IVF0010866 vs. ExPASy Swiss-Prot
Match: Q9FJA6 (40S ribosomal protein S3-3 OS=Arabidopsis thaliana OX=3702 GN=RPS3C PE=1 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 2.8e-109
Identity = 209/249 (83.94%), Postives = 225/249 (90.36%), Query Frame = 0


Query: 38  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 97
           MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 98  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 157
           EKGRRIRELTS+VQKRFKFP++SVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 158 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 217
           GVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180

Query: 218 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTADIEVPVA---- 277
           VLG+KVKIMLDWDPKGKQGP TPLPDVV IH+PKE++  +  P  V+T    VP A    
Sbjct: 181 VLGLKVKIMLDWDPKGKQGPMTPLPDVVIIHTPKEDDVYI-APAQVVTQAAFVPEAPLTT 240

Query: 278 --VPPVPVA 281
              P +PVA
Sbjct: 241 TDYPAMPVA 248

[Close]

BLAST of IVF0010866 vs. ExPASy Swiss-Prot
Match: Q9SIP7 (40S ribosomal protein S3-1 OS=Arabidopsis thaliana OX=3702 GN=RPS3A PE=1 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 1.0e-108
Identity = 206/251 (82.07%), Postives = 222/251 (88.45%), Query Frame = 0


Query: 38  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 97
           MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 98  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 157
           EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 158 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 217
           GVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180

Query: 218 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTA----------- 277
           VLGIKVKIMLDWDP GK GP TPLPDVV IH+PK  +++V+  PA   A           
Sbjct: 181 VLGIKVKIMLDWDPTGKSGPKTPLPDVVIIHAPK--DDVVYSAPAQAAAPVTLVQEAPLT 240

[Close]

BLAST of IVF0010866 vs. ExPASy Swiss-Prot
Match: P02350 (40S ribosomal protein S3-A OS=Xenopus laevis OX=8355 GN=rps3-a PE=2 SV=2)

HSP 1 Score: 354.8 bits (909), Expect = 9.2e-97
Identity = 183/216 (84.72%), Postives = 192/216 (88.89%), Query Frame = 0


Query: 38  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 97
           MA Q+SKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1   MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60

Query: 98  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 157
           EKGRRIRELT+VVQKRF FPE SVELYAEKV  RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 158 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 217
           GVLRF+MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV  Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180

Query: 218 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEE 254
           VLGIKVKIML WDP GK GP  PLPD V+I  PK+E
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216

[Close]

BLAST of IVF0010866 vs. ExPASy Swiss-Prot
Match: P47835 (40S ribosomal protein S3-B OS=Xenopus laevis OX=8355 GN=rps3-b PE=2 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 9.2e-97
Identity = 183/216 (84.72%), Postives = 192/216 (88.89%), Query Frame = 0


Query: 38  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 97
           MA QMSKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP +TEIII ATRTQNVLG
Sbjct: 1   MAAQMSKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTQTEIIILATRTQNVLG 60

Query: 98  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 157
           EKGRRIRELT+VVQKRF FPE SVELYAEKV  RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 158 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 217
           GVLRF+MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV  Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180

Query: 218 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEE 254
           VLGIKVKIML WDP GK GP  PLPD V+I  PK+E
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216

[Close]

BLAST of IVF0010866 vs. ExPASy TrEMBL
Match: A0A0A0LHQ6 (KH type-2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G000230 PE=3 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 7.3e-129
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 38  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 97
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 98  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 157
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 158 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 217
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180

Query: 218 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTADIEVPVAVPPV 277
           VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTADIEVPVAVPPV
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTADIEVPVAVPPV 240

Query: 278 PVA 281
           PVA
Sbjct: 241 PVA 243

[Close]

BLAST of IVF0010866 vs. ExPASy TrEMBL
Match: A0A1S3CAV4 (40S ribosomal protein S3-2 OS=Cucumis melo OX=3656 GN=LOC103498727 PE=3 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 7.3e-129
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 38  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 97
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 98  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 157
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 158 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 217
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180

Query: 218 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTADIEVPVAVPPV 277
           VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTADIEVPVAVPPV
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTADIEVPVAVPPV 240

Query: 278 PVA 281
           PVA
Sbjct: 241 PVA 243

[Close]

BLAST of IVF0010866 vs. ExPASy TrEMBL
Match: A0A5A7UZY3 (40S ribosomal protein S3-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G001180 PE=3 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 1.2e-123
Identity = 234/235 (99.57%), Postives = 234/235 (99.57%), Query Frame = 0


Query: 46  RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRE 105
           R FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRE
Sbjct: 569 RVFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRE 628

Query: 106 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVME 165
           LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVME
Sbjct: 629 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVME 688

Query: 166 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKI 225
           SGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKI
Sbjct: 689 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKI 748

Query: 226 MLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTADIEVPVAVPPVPVA 281
           MLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTADIEVPVAVPPVPVA
Sbjct: 749 MLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTADIEVPVAVPPVPVA 803

[Close]

BLAST of IVF0010866 vs. ExPASy TrEMBL
Match: A0A6J1DMD4 (40S ribosomal protein S3-2-like OS=Momordica charantia OX=3673 GN=LOC111021901 PE=3 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 8.6e-122
Identity = 230/237 (97.05%), Postives = 234/237 (98.73%), Query Frame = 0


Query: 38  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 97
           M+TQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 98  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 157
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 158 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 217
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180

Query: 218 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTADIEVPVAV 275
           VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHR PA+L+ DIE+PV V
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHR-PAILSTDIEIPVVV 236

[Close]

BLAST of IVF0010866 vs. ExPASy TrEMBL
Match: A0A6J1G4R4 (40S ribosomal protein S3-2-like OS=Cucurbita moschata OX=3662 GN=LOC111450719 PE=3 SV=1)

HSP 1 Score: 445.7 bits (1145), Expect = 1.5e-121
Identity = 233/242 (96.28%), Postives = 233/242 (96.28%), Query Frame = 0


Query: 38  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 97
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 98  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 157
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 158 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 217
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180

Query: 218 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRP-----PAVLTADIEVPV 275
           VLGIKVKIMLDWDPKGKQGPTTPLPDVV IHSPKEEEEIVHRP      AVLT DIEVPV
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVVIHSPKEEEEIVHRPAAAAAAAVLTTDIEVPV 240

[Close]

BLAST of IVF0010866 vs. NCBI nr
Match: XP_004141068.1 (40S ribosomal protein S3-2 [Cucumis sativus] >XP_008459686.1 PREDICTED: 40S ribosomal protein S3-2 [Cucumis melo] >KGN60514.1 hypothetical protein Csa_019414 [Cucumis sativus])

HSP 1 Score: 469 bits (1208), Expect = 5.58e-166
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 38  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 97
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 98  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 157
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 158 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 217
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180

Query: 218 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTADIEVPVAVPPV 277
           VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTADIEVPVAVPPV
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTADIEVPVAVPPV 240

Query: 278 PVA 280
           PVA
Sbjct: 241 PVA 243

[Close]

BLAST of IVF0010866 vs. NCBI nr
Match: XP_038890738.1 (40S ribosomal protein S3-2 [Benincasa hispida])

HSP 1 Score: 457 bits (1175), Expect = 5.35e-161
Identity = 236/238 (99.16%), Postives = 236/238 (99.16%), Query Frame = 0


Query: 38  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 97
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 98  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 157
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 158 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 217
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180

Query: 218 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTADIEVPVAVP 275
           VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRP AVLT DIEVPVAVP
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPAAVLTTDIEVPVAVP 238

[Close]

BLAST of IVF0010866 vs. NCBI nr
Match: XP_023546322.1 (40S ribosomal protein S3-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 446 bits (1148), Expect = 6.96e-157
Identity = 233/238 (97.90%), Postives = 233/238 (97.90%), Query Frame = 0


Query: 38  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 97
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 98  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 157
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 158 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 217
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180

Query: 218 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPA-VLTADIEVPVAV 274
           VLGIKVKIMLDWDPKGKQGPTTPLPDVV IHSPKEEEEIVHRP A VLT DIEVPV V
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVVIHSPKEEEEIVHRPAAAVLTTDIEVPVVV 238

[Close]

BLAST of IVF0010866 vs. NCBI nr
Match: XP_022154712.1 (40S ribosomal protein S3-2-like [Momordica charantia])

HSP 1 Score: 446 bits (1146), Expect = 1.26e-156
Identity = 230/237 (97.05%), Postives = 234/237 (98.73%), Query Frame = 0


Query: 38  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 97
           M+TQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 98  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 157
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 158 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 217
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180

Query: 218 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTADIEVPVAV 274
           VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRP A+L+ DIE+PV V
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRP-AILSTDIEIPVVV 236

[Close]

BLAST of IVF0010866 vs. NCBI nr
Match: XP_022946744.1 (40S ribosomal protein S3-2-like [Cucurbita moschata])

HSP 1 Score: 445 bits (1144), Expect = 3.27e-156
Identity = 233/242 (96.28%), Postives = 233/242 (96.28%), Query Frame = 0


Query: 38  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 97
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 98  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 157
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 158 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 217
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180

Query: 218 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPA-----VLTADIEVPV 274
           VLGIKVKIMLDWDPKGKQGPTTPLPDVV IHSPKEEEEIVHRP A     VLT DIEVPV
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVVIHSPKEEEEIVHRPAAAAAAAVLTTDIEVPV 240

[Close]

BLAST of IVF0010866 vs. TAIR 10
Match: AT3G53870.1 (Ribosomal protein S3 family protein )

HSP 1 Score: 399.1 bits (1024), Expect = 3.0e-111
Identity = 209/247 (84.62%), Postives = 220/247 (89.07%), Query Frame = 0


Query: 38  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 97
           M TQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MTTQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 98  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 157
           EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 158 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 217
           GVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQG 180

Query: 218 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVH----RPPAVLTAD-----I 276
           VLGIKVK+MLDWDPKG  GP TPLPDVV IHSPKEEE I        PA L AD     +
Sbjct: 181 VLGIKVKVMLDWDPKGISGPKTPLPDVVIIHSPKEEEAIYAPAQVAAPAALVADAPLTAV 240

[Close]

BLAST of IVF0010866 vs. TAIR 10
Match: AT5G35530.1 (Ribosomal protein S3 family protein )

HSP 1 Score: 396.4 bits (1017), Expect = 2.0e-110
Identity = 209/249 (83.94%), Postives = 225/249 (90.36%), Query Frame = 0


Query: 38  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 97
           MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 98  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 157
           EKGRRIRELTS+VQKRFKFP++SVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 158 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 217
           GVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180

Query: 218 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTADIEVPVA---- 277
           VLG+KVKIMLDWDPKGKQGP TPLPDVV IH+PKE++  +  P  V+T    VP A    
Sbjct: 181 VLGLKVKIMLDWDPKGKQGPMTPLPDVVIIHTPKEDDVYI-APAQVVTQAAFVPEAPLTT 240

Query: 278 --VPPVPVA 281
              P +PVA
Sbjct: 241 TDYPAMPVA 248

[Close]

BLAST of IVF0010866 vs. TAIR 10
Match: AT2G31610.1 (Ribosomal protein S3 family protein )

HSP 1 Score: 394.4 bits (1012), Expect = 7.5e-110
Identity = 206/251 (82.07%), Postives = 222/251 (88.45%), Query Frame = 0


Query: 38  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 97
           MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 98  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 157
           EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 158 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 217
           GVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180

Query: 218 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTA----------- 277
           VLGIKVKIMLDWDP GK GP TPLPDVV IH+PK  +++V+  PA   A           
Sbjct: 181 VLGIKVKIMLDWDPTGKSGPKTPLPDVVIIHAPK--DDVVYSAPAQAAAPVTLVQEAPLT 240

The following BLAST results are available for this feature:

BLAST of IVF0010866 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M339	4.3e-110	84.62	40S ribosomal protein S3-2 OS=Arabidopsis thaliana OX=3702 GN=RPS3B PE=1 SV=1	[more]
Q9FJA6	2.8e-109	83.94	40S ribosomal protein S3-3 OS=Arabidopsis thaliana OX=3702 GN=RPS3C PE=1 SV=1	[more]
Q9SIP7	1.0e-108	82.07	40S ribosomal protein S3-1 OS=Arabidopsis thaliana OX=3702 GN=RPS3A PE=1 SV=1	[more]
P02350	9.2e-97	84.72	40S ribosomal protein S3-A OS=Xenopus laevis OX=8355 GN=rps3-a PE=2 SV=2	[more]
P47835	9.2e-97	84.72	40S ribosomal protein S3-B OS=Xenopus laevis OX=8355 GN=rps3-b PE=2 SV=1	[more]

BLAST of IVF0010866 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LHQ6	7.3e-129	100.00	KH type-2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G000230 P...	[more]
A0A1S3CAV4	7.3e-129	100.00	40S ribosomal protein S3-2 OS=Cucumis melo OX=3656 GN=LOC103498727 PE=3 SV=1	[more]
A0A5A7UZY3	1.2e-123	99.57	40S ribosomal protein S3-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A6J1DMD4	8.6e-122	97.05	40S ribosomal protein S3-2-like OS=Momordica charantia OX=3673 GN=LOC111021901 P...	[more]
A0A6J1G4R4	1.5e-121	96.28	40S ribosomal protein S3-2-like OS=Cucurbita moschata OX=3662 GN=LOC111450719 PE...	[more]

BLAST of IVF0010866 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141068.1	5.58e-166	100.00	40S ribosomal protein S3-2 [Cucumis sativus] >XP_008459686.1 PREDICTED: 40S ribo...	[more]
XP_038890738.1	5.35e-161	99.16	40S ribosomal protein S3-2 [Benincasa hispida]	[more]
XP_023546322.1	6.96e-157	97.90	40S ribosomal protein S3-2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022154712.1	1.26e-156	97.05	40S ribosomal protein S3-2-like [Momordica charantia]	[more]
XP_022946744.1	3.27e-156	96.28	40S ribosomal protein S3-2-like [Cucurbita moschata]	[more]

BLAST of IVF0010866 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53870.1	3.0e-111	84.62	Ribosomal protein S3 family protein	[more]
AT5G35530.1	2.0e-110	83.94	Ribosomal protein S3 family protein	[more]
AT2G31610.1	7.5e-110	82.07	Ribosomal protein S3 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001351	Ribosomal protein S3, C-terminal	PFAM	PF00189	Ribosomal_S3_C	coord: 143..225 e-value: 3.2E-25 score: 88.4
IPR004044	K Homology domain, type 2	PFAM	PF07650	KH_2	coord: 57..130 e-value: 1.5E-12 score: 47.2
IPR004044	K Homology domain, type 2	PROSITE	PS50823	KH_TYPE_2	coord: 58..129 score: 11.333969
IPR015946	K homology domain-like, alpha/beta	GENE3D	3.30.300.20		coord: 35..128 e-value: 9.2E-49 score: 165.4
IPR036419	Ribosomal protein S3, C-terminal domain superfamily	GENE3D	3.30.1140.32		coord: 130..256 e-value: 1.3E-66 score: 224.3
IPR036419	Ribosomal protein S3, C-terminal domain superfamily	SUPERFAMILY	54821	Ribosomal protein S3 C-terminal domain	coord: 130..228
IPR005703	Ribosomal protein S3, eukaryotic/archaeal	TIGRFAM	TIGR01008	TIGR01008	coord: 45..248 e-value: 5.3E-71 score: 236.4
None	No IPR available	PANTHER	PTHR11760:SF51	RIBOSOMAL PROTEIN S3, PUTATIVE-RELATED	coord: 39..271
None	No IPR available	PANTHER	PTHR11760	30S/40S RIBOSOMAL PROTEIN S3	coord: 39..271
None	No IPR available	CDD	cd02413	40S_S3_KH	coord: 52..132 e-value: 1.07082E-51 score: 162.006
IPR018280	Ribosomal protein S3, conserved site	PROSITE	PS00548	RIBOSOMAL_S3	coord: 184..220
IPR009019	K homology domain superfamily, prokaryotic type	SUPERFAMILY	54814	Prokaryotic type KH domain (KH-domain type II)	coord: 47..136

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0010866.1	IVF0010866.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0005634	nucleus
cellular_component	GO:0015935	small ribosomal subunit
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome