IVF0010819 (gene) Melon (IVF77) v1

Overview
NameIVF0010819
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr03: 16833580 .. 16833783 (+)
RNA-Seq ExpressionIVF0010819
SyntenyIVF0010819
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACATTTGATGAGCATTGCGAGGAGTTTGAGAAGAAAATTGAGAATTTTAGTCCTTTGAAGGAAGAGGTGTCAAGACCTAAGAAAAAGAGAAATGTTATGATGAAGAAGGCCTTGAGAGCACAGCTTAAGAAAAGGCGAGTTGGAAAAGCAAAAAAAAAACCTCAAGAAGATGAAGGGGAAGACGGCGAGGAAAGTGAATAA

mRNA sequence

ATGACATTTGATGAGCATTGCGAGGAGTTTGAGAAGAAAATTGAGAATTTTAGTCCTTTGAAGGAAGAGGTGTCAAGACCTAAGAAAAAGAGAAATGTTATGATGAAGAAGGCCTTGAGAGCACAGCTTAAGAAAAGGCGAGTTGGAAAAGCAAAAAAAAAACCTCAAGAAGATGAAGGGGAAGACGGCGAGGAAAGTGAATAA

Coding sequence (CDS)

ATGACATTTGATGAGCATTGCGAGGAGTTTGAGAAGAAAATTGAGAATTTTAGTCCTTTGAAGGAAGAGGTGTCAAGACCTAAGAAAAAGAGAAATGTTATGATGAAGAAGGCCTTGAGAGCACAGCTTAAGAAAAGGCGAGTTGGAAAAGCAAAAAAAAAACCTCAAGAAGATGAAGGGGAAGACGGCGAGGAAAGTGAATAA

Protein sequence

MTFDEHCEEFEKKIENFSPLKEEVSRPKKKRNVMMKKALRAQLKKRRVGKAKKKPQEDEGEDGEESE
Homology
BLAST of IVF0010819 vs. ExPASy TrEMBL
Match: A0A5A7UGJ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold33G00220 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 8.9e-09
Identity = 41/61 (67.21%), Postives = 51/61 (83.61%), Query Frame = 0

Query: 2   TFDEHCEEFEKKIENFSPLKEEVSRPKKKRNVMMK-KALRAQLKKRRVGKAKKKPQEDEG 61
           TFDEHCEEFEK+I++ SPLKEE SR KKKR V+M+  ALR Q +KRRV KAK+K +++EG
Sbjct: 62  TFDEHCEEFEKEIKDLSPLKEETSRLKKKRKVIMRNNALRVQFEKRRVDKAKRKLKKNEG 121

BLAST of IVF0010819 vs. ExPASy TrEMBL
Match: A0A5A7VIU5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold186G001080 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 6.0e-05
Identity = 38/67 (56.72%), Postives = 50/67 (74.63%), Query Frame = 0

Query: 2   TFDEHCEEFEKKIENFSPLKEEVSRPKKKRNV-MMKKALRAQLKKRRVGKAKKKPQEDEG 61
           T DE+ EEF+K+IE+   L+EE SR KK+  V M KK LRAQ +K+R  K K+KP+E+EG
Sbjct: 69  TLDEYYEEFQKEIEDLCLLEEEGSRNKKEGKVTMKKKTLRAQFEKKRAEKEKRKPRENEG 128

Query: 62  EDGEESE 68
           E+G ESE
Sbjct: 129 EEGAESE 135

BLAST of IVF0010819 vs. NCBI nr
Match: KAA0052865.1 (hypothetical protein E6C27_scaffold33G00220 [Cucumis melo var. makuwa])

HSP 1 Score: 68.6 bits (166), Expect = 1.58e-12
Identity = 41/61 (67.21%), Postives = 51/61 (83.61%), Query Frame = 0

Query: 2   TFDEHCEEFEKKIENFSPLKEEVSRPKKKRNVMMKK-ALRAQLKKRRVGKAKKKPQEDEG 61
           TFDEHCEEFEK+I++ SPLKEE SR KKKR V+M+  ALR Q +KRRV KAK+K +++EG
Sbjct: 62  TFDEHCEEFEKEIKDLSPLKEETSRLKKKRKVIMRNNALRVQFEKRRVDKAKRKLKKNEG 121

BLAST of IVF0010819 vs. NCBI nr
Match: KAA0065695.1 (hypothetical protein E6C27_scaffold90G001660 [Cucumis melo var. makuwa] >TYK14446.1 hypothetical protein E5676_scaffold186G001080 [Cucumis melo var. makuwa])

HSP 1 Score: 55.8 bits (133), Expect = 9.94e-08
Identity = 38/67 (56.72%), Postives = 50/67 (74.63%), Query Frame = 0

Query: 2   TFDEHCEEFEKKIENFSPLKEEVSRPKKKRNVMMKK-ALRAQLKKRRVGKAKKKPQEDEG 61
           T DE+ EEF+K+IE+   L+EE SR KK+  V MKK  LRAQ +K+R  K K+KP+E+EG
Sbjct: 69  TLDEYYEEFQKEIEDLCLLEEEGSRNKKEGKVTMKKKTLRAQFEKKRAEKEKRKPRENEG 128

Query: 62  EDGEESE 67
           E+G ESE
Sbjct: 129 EEGAESE 135

BLAST of IVF0010819 vs. NCBI nr
Match: KAA0048705.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 53.1 bits (126), Expect = 3.07e-06
Identity = 31/53 (58.49%), Postives = 38/53 (71.70%), Query Frame = 0

Query: 2   TFDEHCEEFEKKIENFSPLKEEVSRPKKKRNVMMKK-ALRAQLKKRRVGKAKK 53
           T +EHCEEFEK+IEN  PL++E  RPKKKR V MKK  L+ Q + R+  K KK
Sbjct: 131 THEEHCEEFEKEIENLCPLEKEAPRPKKKRKVTMKKKTLKMQFENRQAEKVKK 183

BLAST of IVF0010819 vs. NCBI nr
Match: TYK15833.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 52.4 bits (124), Expect = 4.04e-06
Identity = 31/53 (58.49%), Postives = 38/53 (71.70%), Query Frame = 0

Query: 2   TFDEHCEEFEKKIENFSPLKEEVSRPKKKRNVMMKK-ALRAQLKKRRVGKAKK 53
           T +EHCEEFEK+IEN  PL++E  RPKKKR V MKK  L+ Q + R+  K KK
Sbjct: 67  TQEEHCEEFEKEIENLCPLEKEAPRPKKKRKVTMKKKTLKMQFENRQAEKVKK 119

BLAST of IVF0010819 vs. NCBI nr
Match: KAA0066500.1 (protein MNN4-like [Cucumis melo var. makuwa] >TYK06141.1 protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 51.6 bits (122), Expect = 8.61e-06
Identity = 35/67 (52.24%), Postives = 46/67 (68.66%), Query Frame = 0

Query: 2   TFDEHCEEFEKKIENFSPLKEEVSRPKKKRNVMMKK-ALRAQLKKRRVGKAKKKPQEDEG 61
           TF+EH EEFEK+I    PL+++  RP  KR +MMKK ALR +    +V K K+KP++DE 
Sbjct: 102 TFEEHYEEFEKEINELIPLEDKAIRPATKRKIMMKKKALREKFANGQVEKLKRKPKKDEE 161

Query: 62  EDGEESE 67
           E  EESE
Sbjct: 162 EVSEESE 168

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UGJ68.9e-0967.21Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7VIU56.0e-0556.72Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
KAA0052865.11.58e-1267.21hypothetical protein E6C27_scaffold33G00220 [Cucumis melo var. makuwa][more]
KAA0065695.19.94e-0856.72hypothetical protein E6C27_scaffold90G001660 [Cucumis melo var. makuwa] >TYK1444... [more]
KAA0048705.13.07e-0658.49protein MNN4-like [Cucumis melo var. makuwa][more]
TYK15833.14.04e-0658.49protein MNN4-like [Cucumis melo var. makuwa][more]
KAA0066500.18.61e-0652.24protein MNN4-like [Cucumis melo var. makuwa] >TYK06141.1 protein MNN4-like [Cucu... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..67

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0010819.1IVF0010819.1mRNA