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IVF0010818 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTCTTTTTAATTTCTCCTATATATACTCCCTCTCTGCTCCTCCTTTCTCCTCAATCACTCACCGCTCCTCTCTCTCCCTCTCCTCCACTTTCCATCTCTCTCATCTCTTTACATTCATATTTTCCTTTCTATTCTTTCTATCTTTCCATTTCATTTCATATACAGAAATGGCGATTAGAAGTCTTGTTGCCATGATTTTAGTGTCTTTCTTGATCGCCTCTGCTTTCGCTCAATCTCCAACCCAATCACCGTCCAAGGCTCCATCGGTCTCTCCGTCTGTTAAGTCCCCCAAATCCTCTCCGGCGTTTGCGCCTACTCCTTCCTCCTTGAAGTCTCCACCATCTCCTCCTTCTACTTCTCCTTCTACTTCGCCGTCCAGTTCTCCGTCTCCGGCCACTTCTCCTTCCTCGATCTCCTCACCGCCCGCTGACGCTCCCGCTCCGTCAGGTAACGGCGCTGCTTCGATCACTTTTTCGGTGTTGGGGTCTGCTGCGGTTGCGCTATACGCCGTCGTATTGATGATCTGAGAGCCAATCCGATTCGATTCGTTCTGTTTGTCTGTCTATTTGAGTGATTTGTTGTAGCATTTTACGGAGTACATTTTATCTTGGTTTTGTATTTTTGTATTTTTTTTTTTTTTAACTTTTTCA GTTCTTTTTAATTTCTCCTATATATACTCCCTCTCTGCTCCTCCTTTCTCCTCAATCACTCACCGCTCCTCTCTCTCCCTCTCCTCCACTTTCCATCTCTCTCATCTCTTTACATTCATATTTTCCTTTCTATTCTTTCTATCTTTCCATTTCATTTCATATACAGAAATGGCGATTAGAAGTCTTGTTGCCATGATTTTAGTGTCTTTCTTGATCGCCTCTGCTTTCGCTCAATCTCCAACCCAATCACCGTCCAAGGCTCCATCGGTCTCTCCGTCTGTTAAGTCCCCCAAATCCTCTCCGGCGTTTGCGCCTACTCCTTCCTCCTTGAAGTCTCCACCATCTCCTCCTTCTACTTCTCCTTCTACTTCGCCGTCCAGTTCTCCGTCTCCGGCCACTTCTCCTTCCTCGATCTCCTCACCGCCCGCTGACGCTCCCGCTCCGTCAGGTAACGGCGCTGCTTCGATCACTTTTTCGGTGTTGGGGTCTGCTGCGGTTGCGCTATACGCCGTCGTATTGATGATCTGAGAGCCAATCCGATTCGATTCGTTCTGTTTGTCTGTCTATTTGAGTGATTTGTTGTAGCATTTTACGGAGTACATTTTATCTTGGTTTTGTATTTTTGTATTTTTTTTTTTTTTAACTTTTTCA ATGGCGATTAGAAGTCTTGTTGCCATGATTTTAGTGTCTTTCTTGATCGCCTCTGCTTTCGCTCAATCTCCAACCCAATCACCGTCCAAGGCTCCATCGGTCTCTCCGTCTGTTAAGTCCCCCAAATCCTCTCCGGCGTTTGCGCCTACTCCTTCCTCCTTGAAGTCTCCACCATCTCCTCCTTCTACTTCTCCTTCTACTTCGCCGTCCAGTTCTCCGTCTCCGGCCACTTCTCCTTCCTCGATCTCCTCACCGCCCGCTGACGCTCCCGCTCCGTCAGGTAACGGCGCTGCTTCGATCACTTTTTCGGTGTTGGGGTCTGCTGCGGTTGCGCTATACGCCGTCGTATTGATGATCTGA MAIRSLVAMILVSFLIASAFAQSPTQSPSKAPSVSPSVKSPKSSPAFAPTPSSLKSPPSPPSTSPSTSPSSSPSPATSPSSISSPPADAPAPSGNGAASITFSVLGSAAVALYAVVLMI Homology
BLAST of IVF0010818 vs. ExPASy Swiss-Prot
Match: Q8LCN5 (Classical arabinogalactan protein 1 OS=Arabidopsis thaliana OX=3702 GN=AGP1 PE=2 SV=2) HSP 1 Score: 51.6 bits (122), Expect = 7.1e-06 Identity = 59/132 (44.70%), Postives = 73/132 (55.30%), Query Frame = 0
BLAST of IVF0010818 vs. ExPASy TrEMBL
Match: A0A5A7V5Q9 (Classical arabinogalactan protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold753G00230 PE=4 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 2.9e-42 Identity = 118/119 (99.16%), Postives = 118/119 (99.16%), Query Frame = 0
BLAST of IVF0010818 vs. ExPASy TrEMBL
Match: A0A0A0KZB8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G111620 PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 4.7e-29 Identity = 98/123 (79.67%), Postives = 104/123 (84.55%), Query Frame = 0
BLAST of IVF0010818 vs. ExPASy TrEMBL
Match: A0A6J1FW49 (classical arabinogalactan protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111447861 PE=4 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 3.5e-24 Identity = 87/127 (68.50%), Postives = 97/127 (76.38%), Query Frame = 0
BLAST of IVF0010818 vs. ExPASy TrEMBL
Match: A0A6J1JSK4 (classical arabinogalactan protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111488535 PE=4 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 9.6e-22 Identity = 83/127 (65.35%), Postives = 94/127 (74.02%), Query Frame = 0
BLAST of IVF0010818 vs. ExPASy TrEMBL
Match: A0A6J1E9Q3 (classical arabinogalactan protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111430664 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 2.8e-21 Identity = 87/127 (68.50%), Postives = 93/127 (73.23%), Query Frame = 0
BLAST of IVF0010818 vs. NCBI nr
Match: KAA0061155.1 (classical arabinogalactan protein 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 176 bits (445), Expect = 2.31e-54 Identity = 118/119 (99.16%), Postives = 118/119 (99.16%), Query Frame = 0
BLAST of IVF0010818 vs. NCBI nr
Match: XP_038877310.1 (classical arabinogalactan protein 1 [Benincasa hispida]) HSP 1 Score: 135 bits (340), Expect = 2.70e-38 Identity = 99/125 (79.20%), Postives = 105/125 (84.00%), Query Frame = 0
BLAST of IVF0010818 vs. NCBI nr
Match: KGN53727.1 (hypothetical protein Csa_015026 [Cucumis sativus]) HSP 1 Score: 132 bits (333), Expect = 2.62e-37 Identity = 98/123 (79.67%), Postives = 104/123 (84.55%), Query Frame = 0
BLAST of IVF0010818 vs. NCBI nr
Match: XP_022942993.1 (classical arabinogalactan protein 1-like [Cucurbita moschata]) HSP 1 Score: 116 bits (291), Expect = 6.71e-31 Identity = 87/127 (68.50%), Postives = 97/127 (76.38%), Query Frame = 0
BLAST of IVF0010818 vs. NCBI nr
Match: XP_023542663.1 (classical arabinogalactan protein 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 116 bits (291), Expect = 7.12e-31 Identity = 87/127 (68.50%), Postives = 99/127 (77.95%), Query Frame = 0
BLAST of IVF0010818 vs. TAIR 10
Match: AT5G64310.1 (arabinogalactan protein 1 ) HSP 1 Score: 51.6 bits (122), Expect = 5.0e-07 Identity = 59/132 (44.70%), Postives = 73/132 (55.30%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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